Pregenerated sensors for PCDHGA10 (Homo sapiens)
Ensembl gene IDs: ENSG00000253846Ensembl transcript IDs: ENST00000398610.2, ENST00000398610.3, ENST00000612503.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCAGAACAAGAGGGTTGCTTAAGGGGCTGGAGTTTCAATATGTaGCCACCCAGGAGGAAATATAAATTGACAGGCACTTCTGTATGG | + |
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Preference number: 1 (lower is better) Translates to: PSEQEGCLRGWSFNM*PPRRKYKLTGTSVW Trigger: CCATACAGAAGTGCCTGTCAATTTATATTTCCTCCTGGGTGGTCACATATTGAAACTCCAGCCCCTTAAGCAACCCTCTTGTTCTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR TCA 90 bp | TTTCAGAGTTTCAGGTGTTTGCCTCCTTATACATTAAAGAGCCACTaGAATAGCTTTGTCATATATCTCTTGCTCCTGTTCTCGGGAACA | + |
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Preference number: 1 (lower is better) Translates to: FQSFRCLPPYTLKSH*NSFVIYLLLLFSGT Trigger: TGTTCCCGAGAACAGGAGCAAGAGATATATGACAAAGCTATTTCAGTGGCTCTTTAATGTATAAGGAGGCAAACACCTGAAACTCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR TCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTATGGAGTTTCAATATGTaGCCACCCAGGAGGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLWSFNM*PPRRKY Trigger: ATATTTCCTCCTGGGTGGTCACATATTGAAACTCCA...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR TCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTAGAGGTGATTTCTTTCTaGTACTTACCTATTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLEVISF*YLPILT Trigger: GGTAAGAATAGGTAAGTATCAGAAAGAAATCACCTC...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR TCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTACCTCAGGATCCCTATTaGGCAATGAAAGTTAAATTA | + |
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Preference number: 2 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLPQDPY*AMKVKL Trigger: TAATTTAACTTTCATTGCTCAATAGGGATCCTGAGG...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR TCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCGGAGGAAATATAAATTaGCAGGCACTTCTGTATGGA | + |
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Preference number: 2 (lower is better) Translates to: LGNMYKFICLPNPYLLSAGGNIN*QALLYG Trigger: TCCATACAGAAGTGCCTGTCAATTTATATTTCCTCC...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR GCA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATTCAGAACAAGAGGGTTaGTTAAGGGGCTGGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYSEQEG*LRGWSF Trigger: GAAACTCCAGCCCCTTAAGCAACCCTCTTGTTCTGA...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR CCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGACAGGCACTTCTGTATaGAAGTCTGTCTTAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: GDFFLILTYSYQTCLQNKTGTSV*KSVLGI Trigger: AATTCCTAAGACAGACTTCCATACAGAAGTGCCTGT...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR CAA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTACTATTGCCCTTCTCCTaGGGAAGAACTGCATTGAGT | + |
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Preference number: 3 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLLLPFS*GRTALS Trigger: ACTCAATGCAGTTCTTCCCAAGGAGAAGGGCAATAG...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR TCA 72 bp | CAAGAGGGTTGCTTAAGGGGCTGGAGTTTCAATATGTaGCCACCCAGGAGGAAATATAAATTGACAGGCACT | + |
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Preference number: 3 (lower is better) Translates to: QEGCLRGWSFNM*PPRRKYKLTGT Trigger: AGTGCCTGTCAATTTATATTTCCTCCTGGGTGGTCACATATTGAAACTCCAGCCCCTTAAGCAACCCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR TCA 72 bp | TGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTaGTACTTACCTATTCTTACCAGACCTGCCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: WIWVVFPEVISF*YLPILTRPAFR Trigger: TCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR TCA 72 bp | TTCAGGTGTTTGCCTCCTTATACATTAAAGAGCCACTaGAATAGCTTTGTCATATATCTCTTGCTCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FRCLPPYTLKSH*NSFVIYLLLLF Trigger: GAACAGGAGCAAGAGATATATGACAAAGCTATTTCAGTGGCTCTTTAATGTATAAGGAGGCAAACACCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR-3UTR CAA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATTTGGGAAGAACTGCATaGAGTATTCTTGGATTTGGG | + |
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Preference number: 3 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYLGRTA*SILGFG Trigger: CCCAAATCCAAGAATACTCAATGCAGTTCTTCCCAA...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR CAA 72 bp | TCGAGCTTCCTTGGACTGAAATGCCAGTTTAATCCATaGGTCCTGTTAGCTCAGCCCAAAGCTGGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSFLGLKCQFNP*VLLAQPKAGCL Trigger: CAGGCAGCCAGCTTTGGGCTGAGCTAACAGGACCAATGGATTAAACTGGCATTTCAGTCCAAGGAAGCTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398610.2 |
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| CDS-3UTR TCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCCCAGCTCCGGGTACTTaGCGCCATTGGCACGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAPAPGT*RHWHGS Trigger: AGAGCCGTGCCAATGGCGTCAAGTACCCGGAGCTGG...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR CAA 72 bp | CAGTACCATGGGGATGGTGATCATGTCCTCCAAAACTaGAGCATTGATCTTGGGCTCTGGAAGGAGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QYHGDGDHVLQN*SIDLGLWKEVK Trigger: CTTCACCTCCTTCCAGAGCCCAAGATCAATGCTCAAGTTTTGGAGGACATGATCACCATCCCCATGGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398610.2 |
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| CDS-3UTR TCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTACCATTGGCACGGCTCTaGACTCTTAGGGAGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLPLARL*TLREKC Trigger: GCACTTCTCCCTAAGAGTTCAGAGCCGTGCCAATGG...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTATCTGGGCATTCTCTTTaGTGTCCGGGTCCAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLSGHSL*CPGPAL Trigger: CAGCGCTGGACCCGGACAGCAAAGAGAATGCCCAGA...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| 3UTR CAA 72 bp | CCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTaGCTTAAGGGGCTGGAGTTTCAATATGTGACCACC | + |
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Preference number: 4 (lower is better) Translates to: PILTRPAFRTRG*LKGLEFQYVTT Trigger: GGTGGTCACATATTGAAACTCCAGCCCCTTAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCACCCTGTCGGTGGCTGTaGCTGTCAGCAGCTGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: VLGNMYKFICLPNPYLLSPCRWL*LSAAEC Trigger: GCACTCAGCTGCTGACAGTCACAGCCACCGACAGGG...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCAGTGCTTATTGGGGCTaGGCTGATAGCTCTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSASAYWG*ADSSAG Trigger: CCCTGCAGAGCTATCAGCTCAGCCCCAATAAGCACT...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGGGTATTCTGGCAAGGTaGAGACCGGCGCGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKGILAR*RPARCH Trigger: ATGACAACGCGCCGGTCTTCACCTTGCCAGAATACC...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCGTGACTGTCAGCAGCTaGGTGCCCACAGGCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAVTVSS*VPTGKF Trigger: GAATTTGCCTGTGGGCACTCAGCTGCTGACAGTCAC...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTTGGAGTGAGCTTCCCTaGAGCCCAGCAGCCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSWSELP*SPAAGL Trigger: CAAACCGGCTGCTGGGCTGCAGGGAAGCTCACTCCA...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTACGGCGCGTTGTCATTTaGATCGAAGACAGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLRRVVI*IEDSHT Trigger: AGTGTGACTGTCTTCGATGCAAATGACAACGCGCCG...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTAGGGCACTTTAAATTCTaGAGTGAGCTTCCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLGHFKF*SELPCS Trigger: GCTGCAGGGAAGCTCACTCCAGAATTTAAAGTGCCC...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTAGTTGATGGATATGTATaGGGACAGAGGTACCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLVDGYV*GQRYPL Trigger: CAGGGGGTACCTCTGTCCTCATACATATCCATCAAC...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTACGCCAGTGTCTGAGTTaGTGGATATGTATGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLRQCLS*WICMRT Trigger: TGTCCTCATACATATCCATCAACTCAGACACTGGCG...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCGCAGGACCAGCCCGCTaGAATCCTTTGATTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAAGPAR*NPLIPL Trigger: CAAAGGAATCAAAGGATTGCAGCGGGCTGGTCCTGC...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCTGTCAGCAGCTGAGTaGCCACAGGCAAATTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKLSAAE*PQANSQ Trigger: CTGAGAATTTGCCTGTGGGCACTCAGCTGCTGACAG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCATGTCACTTCTCCATTaGCACCTTCGTCCCTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAMSLLH*HLRPCR Trigger: CCGACAGGGACGAAGGTGCCAATGGAGAAGTGACAT...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGACAGAGGTACCCCCTaGATGGTGTCTTCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGNMYKFICLPNPYLLSDRGTP*MVSSAR Trigger: CCTGGCTGAAGACACCATCCAGGGGGTACCTCTGTC...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTATGCAGTTGCAAGATATaGTCCTCCATCTTCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLCSCKI*SSIFCL Trigger: CAAGCAGAAGATGGAGGAGCATATCTTGCAACTGCA...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTACTCACTCGGTATTCTaGCAAGGTGAAGACCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSTHSVF*QGEDRR Trigger: GCGCCGGTCTTCACCTTGCCAGAATACCGAGTGAGT...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTACGTGATGGTCAGCTCTaGACTGTTGTCATTTACATC | + |
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Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLRDGQL*TVVIYI Trigger: GATGTAAATGACAACAGTCCAGAGCTGACCATCACG...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATTGGGGCTTGTGTAGTTaGAGCCCTGAGAATCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYWGLCS*SPENPD Trigger: ATCCGGATTCTCAGGGCTTCAACTACACAAGCCCCA...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCATTTGAGCGATTCCTTTaGGCGGCCATTGTAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLGNMYKFICLPNPYLLSFERFL*AAIVVW Trigger: CCAGACTACAATGGCCGCTCAAAGGAATCGCTCAAA...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCTGTGGCTGTCACTGTaGTATTGTAAGAGGATACCT | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKLWLSL*YCKRIP Trigger: AGGTATCCTCTTACAATATCACAGTGACAGCCACAG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTACTGGAATGCAACCATTaGCCTAGTCATTACCATCAT | + |
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Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLLECNH*PSHYHH Trigger: ATGATGGTAATGACTAGGGCAATGGTTGCATTCCAG...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTAGTAGATACGCCAAAATaGAACAGGTTACCTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLVDTPK*NRLPVH Trigger: ATGGACAGGTAACCTGTTCCATTTTGGCGTATCTAC...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGTGGGAAGAACTGCATTaGGTATTCTTGGATTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKWEELH*VFLDLG Trigger: ACCCAAATCCAAGAATACTCAATGCAGTTCTTCCCA...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCAACACTTTTGCAGTTaGAAGATATGCTCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKQHFCS*KICSSI Trigger: GATGGAGGAGCATATCTTGCAACTGCAAAAGTGTTG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGGTTACCTGTCCATTCTaGTCAGAGTCTAAATCATGC | + |
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Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKVTCPF*SESKSC Trigger: GCATGATTTAGACTCTGAGCAGAATGGACAGGTAAC...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR GCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTTCAGAACAAGAGGGTTaGTTAAGGGGCTGGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSSEQEG*LRGWSF Trigger: GAAACTCCAGCCCCTTAAGCAACCCTCTTGTTCTGA...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCGAGTATTCTTGGATTTaGGTTGTGTTTCCAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAEYSWI*VVFPEV Trigger: CACCTCTGGAAACACAACCCAAATCCAAGAATACTC...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR CCA 90 bp | TGCAACCATTGCCCTAGTCATTACCATCATCCAGGGTGTCCTGTATTGCTTTTATTCATACTTAAGTACTaGAATGCAACCATTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: CNHCPSHYHHPGCPVLLLFILKY*NATIAL Trigger: TAGGGCAATGGTTGCATTCCAGTACTTAAGTATGAA...TAAAAGCAATACAGGACACCCTGGATGATGGTAATGACTAGGGCAATGGTTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
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| CDS-3UTR TCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTAGAGGTGATTTCTTTCTaGTACTTACCTATTCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLEVISF*YLPILT Trigger: GGTAAGAATAGGTAAGTATCAGAAAGAAATCACCTC...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTATGTAATCAACACTTTTaGAGTTGCAAGATATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLCNQHF*SCKICS Trigger: GGAGCATATCTTGCAACTGCAAAAGTGTTGATTACA...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCCACTTTCCACCATCATaGCGCAAACTTCAAAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGNMYKFICLPNPYLLSAHFPPS*RKLQSK Trigger: TTTACTTTGAAGTTTGCGGCATGATGGTGGAAAGTG...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTCTGCAAAGTCCTCACTaGACACGTTGTGTGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSLQSPH*TRCVFQ Trigger: TTGAAACACACAACGTGTCCAGTGAGGACTTTGCAG...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR TCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTACTTGTAGCATAAAGTaGGCTTCCGTTGATAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSTCSIK*ASVDRG Trigger: TCCTCTATCAACGGAAGCTCACTTTATGCTACAAGT...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CCA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATGCGGCCATTGTAGTCTaGTTACAGAATTCTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYAAIVV*LQNSAK Trigger: CTTTGCAGAATTCTGTAACCAGACTACAATGGCCGC...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CCA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTATTTTACAGCTGTGGTTaGTGTTTATATTCTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLFYSCG*CLYSDL Trigger: CAGATCAGAATATAAACACCAACCACAGCTGTAAAA...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR TCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTGGAGGAAATATAAATTaGCAGGCACTTCTGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSGGNIN*QALLYG Trigger: TCCATACAGAAGTGCCTGTCAATTTATATTTCCTCC...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCATGGAACTTCAACAATTaGGTGTCAGGTAATTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGNMYKFICLPNPYLLSWNFNN*VSGNFR Trigger: CCGAAAATTACCTGACACGCAATTGTTGAAGTTCCA...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATTATTCTTACCAGACCTaGCTTCAGAACAAGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYYSYQT*LQNKRV Trigger: AACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATA...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATTTGAAAAAGGCCTATTaGCCTTCTCCTTGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYLKKAY*PSPWEE Trigger: TTCTTCCCAAGGAGAAGGGCAATAGGCCTTTTTCAA...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR GCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTTTGTCATATATCTCTTaGTCCTGTTCTCGGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSLSYIS*SCSREH Trigger: ATGTTCCCGAGAACAGGAGCAAGAGATATATGACAA...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CCA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGTCTAGATTTTCTGCTTaGAATTTTGGAGCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDFFLILTYSYQTCLQNKSRFSA*NFGALS Trigger: TGACAATGCTCCAAAATTCCAAGCAGAAAATCTAGA...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CCA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTACAGGCACTTCTGTATaGAAGTCTGTCTTAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LDLGCVSRGDFFLILTYSTGTSV*KSVLGI Trigger: AATTCCTAAGACAGACTTCCATACAGAAGTGCCTGT...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR TCA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCACCTCAGGATCCCTATTaGGCAATGAAAGTTAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VLGNMYKFICLPNPYLLSPQDPY*AMKVKL Trigger: TAATTTAACTTTCATTGCTCAATAGGGATCCTGAGG...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS TCA 90 bp | GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGTGGAACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACGTN Trigger: ATTGGTTCCACAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398610.3 |
||
| CDS GCA 90 bp | CCTCCCATGGAATCCCGAAGAAAAGGCAGAGCAGGACCAGCCCGCTaGAATCCTTTGATTCCTTTGAGCGATTCCTTTGAGCGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PPMESRRKGRAGPAR*NPLIPLSDSFERPL Trigger: CAATGGCCGCTCAAAGGAATCGCTCAAAGGAATCAAAGGATTGCAGCGGGCTGGTCCTGCTCTGCCTTTTCTTCGGGATTCCATGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCACCAGCTCCGGGTACTaGACGCCATTGGCACGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGNMYKFICLPNPYLLSATSSGY*TPLARL Trigger: GAGCCGTGCCAATGGCGTCAAGTACCCGGAGCTGGT...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS TCA 90 bp | AGGACCAGCCCGCTGCAATCCTTTGATTCCTTTGAGCGATTCCTTTaGGCGGCCATTGTAGTCTGGTTACAGAATTCTGCAAAGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTSPLQSFDSFERFL*AAIVVWLQNSAKSS Trigger: TGAGGACTTTGCAGAATTCTGTAACCAGACTACAATGGCCGCTCAAAGGAATCGCTCAAAGGAATCAAAGGATTGCAGCGGGCTGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCCCGGCGCGTTGTCATTaGCATCGAAGACAGTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LGNMYKFICLPNPYLLSAPARCH*HRRQSH Trigger: GTGTGACTGTCTTCGATGCAAATGACAACGCGCCGG...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGGCCCGCTGCAATCCTTaGATTCCTTTGAGCGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKARCNP*IPLSDS Trigger: GGAATCGCTCAAAGGAATCAAAGGATTGCAGCGGGC...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCTATGTCACTTCTCCATaGGCACCTTCGTCCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGNMYKFICLPNPYLLSAYVTSP*APSSLS Trigger: CGACAGGGACGAAGGTGCCAATGGAGAAGTGACATA...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCTAATTCCTCAGGAATaGAGTAGGAGATCTGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKLIPQE*SRRSAG Trigger: CCCGGCAGATCTCCTACTCAATTCCTGAGGAATTAG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | TCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAGGGTTGCTTACTATTGCCCTTCTCCTaGGGAAGAACTGCATTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SDTYLFLPDLPSEQEGCLLLPFS*GRTALS Trigger: ACTCAATGCAGTTCTTCCCAAGGAGAAGGGCAATAG...TAAGCAACCCTCTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGTTTCAACCGGTTCCTTaGTCTTTCTGTGGCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKFQPVP*SFCGFR Trigger: CCTGAAGCCACAGAAAGACAAAGGAACCGGTTGAAA...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTTCCTCACTGGACACGTaGTGTGTTTCAACCGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LDLGCVSRGDFFLILTYSSSLDT*CVSTGS Trigger: GGAACCGGTTGAAACACACAACGTGTCCAGTGAGGA...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGGTAGGTGGGTTGTCATaGATATCTGCCACTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKVGGLS*ISATCS Trigger: GCTACAAGTGGCAGATATCAATGACAACCCACCTAC...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCGGTAAAGTAGGAGACTaGAGAGAAGGTAGGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGNMYKFICLPNPYLLSAGKVGD*REGRWV Trigger: AACCCACCTACCTTCTCTCAAGTCTCCTACTTTACC...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGAATCCTTTGATTCCTTaGAGCGATTCCTTTGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKNPLIP*SDSFER Trigger: CCGCTCAAAGGAATCGCTCAAAGGAATCAAAGGATT...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATGTGAAGACCGGCGCGTaGTCATTTGCATCGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYVKTGA*SFASKT Trigger: TGTCTTCGATGCAAATGACAACGCGCCGGTCTTCAC...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | CTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCAGCCTCAACACTTTTGCAGTaGCAAGATATGCTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGNMYKFICLPNPYLLSASTLLQ*QDMLLH Trigger: ATGGAGGAGCATATCTTGCAACTGCAAAAGTGTTGA...GGCTGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTGAGAAGGTAGGTGGGTaGTCATTGATATCTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LDLGCVSRGDFFLILTYSEKVGG*SLISAT Trigger: AGTGGCAGATATCAATGACAACCCACCTACCTTCTC...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | TTGGATTTGGGTTGTGTTTCCAGAGGTGATTTCTTTCTGATACTTACCTATTCTACGCCAGTGTCTGAGTaGATGGATATGTATGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LDLGCVSRGDFFLILTYSTPVSE*MDMYED Trigger: GTCCTCATACATATCCATCAACTCAGACACTGGCGT...AGAATAGGTAAGTATCAGAAAGAAATCACCTCTGGAAACACAACCCAAATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCAGAGTTTCAGGTGTTaGCCTCCTTATACATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKQSFRC*PPYTLK Trigger: CTTTAATGTATAAGGAGGCAAACACCTGAAACTCTG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCATTGGGAAGAACTGCATaGAGTATTCTTGGATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGNMYKFICLPNPYLLSLGRTA*SILGFG Trigger: CCCAAATCCAAGAATACTCAATGCAGTTCTTCCCAA...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTCGGGAACATGTACAAATTTATCTGTCTTCCCAACCCATATTTACTTTCATTTGTCATATATCTCTaGCTCCTGTTCTCGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VLGNMYKFICLPNPYLLSFVIYL*LLFSGT Trigger: TGTTCCCGAGAACAGGAGCAAGAGATATATGACAAA...TGAAAGTAAATATGGGTTGGGAAGACAGATAAATTTGTACATGTTCCCGAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | GGTGATTTCTTTCTGATACTTACCTATTCTTACCAGACCTGCCTTCAGAACAAGCAGAGGCAGTCATTCTaGTTCCTTTTAAGAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: GDFFLILTYSYQTCLQNKQRQSF*FLLRVI Trigger: AATTACTCTTAAAAGGAACAAGAATGACTGCCTCTG...CTTGTTCTGAAGGCAGGTCTGGTAAGAATAGGTAAGTATCAGAAAGAAATCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS-3UTR CAA 90 bp | AATTCCTCCATCCAGAGGCAGTCATTCTTGTTCCTTTTAAGAGTAATTATCTATGCCACTGAAATAGCTTaGTCATATATCTCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSSIQRQSFLFLLRVIIYATEIA*SYISCS Trigger: GGAGCAAGAGATATATGACAAAGCTATTTCAGTGGC...ATAGATAATTACTCTTAAAAGGAACAAGAATGACTGCCTCTGGATGGAGGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612503.1 |
||
| CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGTGGAACCAATGGGGTATCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLVEPMGYPL Trigger: TAGAGGATACCCCATTGGTTCCACAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398610.3 |
||
| CDS CAA 72 bp | AGAAAAGGCAGAGCAGGACCAGCCCGCTGCAATCCTTaGATTCCTTTGAGCGATTCCTTTGAGCGGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RKGRAGPARCNP*IPLSDSFERPL Trigger: CAATGGCCGCTCAAAGGAATCGCTCAAAGGAATCAAAGGATTGCAGCGGGCTGGTCCTGCTCTGCCTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS CAA 72 bp | CTCACTCGGTATTCTGGCAAGGTGAAGACCGGCGCGTaGTCATTTGCATCGAAGACAGTCACACTGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRYSGKVKTGA*SFASKTVTLTR Trigger: CCTTGTCAGTGTGACTGTCTTCGATGCAAATGACAACGCGCCGGTCTTCACCTTGCCAGAATACCGAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS GCA 72 bp | GAATCCCGAAGAAAAGGCAGAGCAGGACCAGCCCGCTaGAATCCTTTGATTCCTTTGAGCGATTCCTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESRRKGRAGPAR*NPLIPLSDSFE Trigger: CTCAAAGGAATCGCTCAAAGGAATCAAAGGATTGCAGCGGGCTGGTCCTGCTCTGCCTTTTCTTCGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS TCA 72 bp | CCGCTGCAATCCTTTGATTCCTTTGAGCGATTCCTTTaGGCGGCCATTGTAGTCTGGTTACAGAATTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLQSFDSFERFL*AAIVVWLQNSA Trigger: TGCAGAATTCTGTAACCAGACTACAATGGCCGCTCAAAGGAATCGCTCAAAGGAATCAAAGGATTGCAGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS GCA 72 bp | CCTTTGAGCGGCCATTGTAGTCTGGTTACAGAATTCTaGAAAGTCCTCACTGGACACGTTGTGTGTTTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLSGHCSLVTEF*KVLTGHVVCFN Trigger: GTTGAAACACACAACGTGTCCAGTGAGGACTTTGCAGAATTCTGTAACCAGACTACAATGGCCGCTCAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS CAA 90 bp | ATTGTAGTCTGGTTACAGAATTCTGCAAAGTCCTCACTGGACACGTaGTGTGTTTCAACCGGTTCCTTTGTCTTTCTGTGGCTTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IVVWLQNSAKSSLDT*CVSTGSFVFLWLQG Trigger: ACCCTGAAGCCACAGAAAGACAAAGGAACCGGTTGAAACACACAACGTGTCCAGTGAGGACTTTGCAGAATTCTGTAACCAGACTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
||
| CDS CAA 72 bp | TGGTTACAGAATTCTGCAAAGTCCTCACTGGACACGTaGTGTGTTTCAACCGGTTCCTTTGTCTTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLQNSAKSSLDT*CVSTGSFVFLW Trigger: CCACAGAAAGACAAAGGAACCGGTTGAAACACACAACGTGTCCAGTGAGGACTTTGCAGAATTCTGTAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
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| CDS GCA 72 bp | TCTCCAGTATATTTGTTTAGTTGGAACTTCAACAATTaGGTGTCAGGTAATTTTCGGAATGAATATGTCACT | + |
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Preference number: 6 (lower is better) Translates to: SPVYLFSWNFNN*VSGNFRNEYVT Trigger: AGTGACATATTCATTCCGAAAATTACCTGACACGCAATTGTTGAAGTTCCAACTAAACAAATATACTGGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398610.3 ENST00000612503.1 |
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