Pregenerated sensors for PCDHB6 (Homo sapiens)
Ensembl gene IDs: ENSG00000113211Ensembl transcript IDs: ENST00000231136.4, ENST00000622991.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CAA 72 bp | GTCTGTGGATCAAACTGCAAATGTTGTCTGTTCCCTTaGAAAACAACCCGAGCGCCCCGCGAAGCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VCGSNCKCCLFP*KTTRAPREASS Trigger: GGAGCTGGCTTCGCGGGGCGCTCGGGTTGTTTTCAAAGGGAACAGACAACATTTGCAGTTTGATCCACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231136.4 |
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| CDS TCA 72 bp | AACGTGCCACTTTCTGTCTCCTCCAATACGGAATACTaGATCGATTCAGAACCCACCTCTCCCCAAAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: NVPLSVSSNTEY*IDSEPTSPQSI Trigger: GATGCTTTGGGGAGAGGTGGGTTCTGAATCGATTCAGTATTCCGTATTGGAGGAGACAGAAAGTGGCACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231136.4 |
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| CDS CAA 90 bp | TCAGCTCCCAATCACCACATCTACCGTCGACCCTCTCGGATGTCTTaGCAGAGATTTTTAAATTCGTTCTTACAACTTGTCTGGCGACGA | + |
|
Preference number: 6 (lower is better) Translates to: SAPNHHIYRRPSRMS*QRFLNSFLQLVWRR Trigger: TCGTCGCCAGACAAGTTGTAAGAACGAATTTAAAAATCTCTGCAAAGACATCCGAGAGGGTCGACGGTAGATGTGGTGATTGGGAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000231136.4 ENST00000622991.1 |
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| CDS CAA 90 bp | CTTTCTCAGCCGAATTTCTCCTGTGATTGCGTTTATTTCGAAGGGTaGGTTGACGTCATCGACTTGAAACAGGGCGTAAGATACCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSQPNFSCDCVYFEG*VDVIDLKQGVRYLP Trigger: GGGAAGGTATCTTACGCCCTGTTTCAAGTCGATGACGTCAACCAACCCTTCGAAATAAACGCAATCACAGGAGAAATTCGGCTGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231136.4 ENST00000622991.1 |
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