Pregenerated sensors for PCDHB5 (Homo sapiens)
Ensembl gene IDs: ENSG00000113209Ensembl transcript IDs: ENST00000231134.8
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GTAGTAGTGATTGTAAGGAGTAATTTGTGTGGCACCTaGGGTGCCAGTGATGTTTCATTTTCTCTTCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VVVIVRSNLCGT*GASDVSFSLQA Trigger: AGCTTGAAGAGAAAATGAAACATCACTGGCACCCCAGGTGCCACACAAATTACTCCTTACAATCACTACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTGGTGGTCCCGGACCTaGGCGGAGCCCCACCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIWWSRT*AEPHRP Trigger: TGGACGGTGGGGCTCCGCCCAGGTCCGGGACCACCA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGAACTCGCCGGCCCCTaGGTCTCCGGTCAAACACAC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIELAGP*VSGQTH Trigger: GTGTGTTTGACCGGAGACTCAGGGGCCGGCGAGTTC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCAATGCGAATTGTGGTaGTCCCGGACCTGGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIQCELW*SRTWAE Trigger: CTCCGCCCAGGTCCGGGACCACCACAATTCGCATTG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCGACAATGCGAATTGTaGTGGTCCCGGACCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIRQCEL*WSRTWA Trigger: CGCCCAGGTCCGGGACCACCACAATTCGCATTGTCG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGGGAAACACAGTCCCTaGCTGGGTGCTCTCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIGKHSP*LGALWD Trigger: ATCCCAGAGAGCACCCAGCCAGGGACTGTGTTTCCC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTTCCGGGGCATTTTCTaGGGTAGGGCTGGAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIFRGIF*GRAGER Trigger: ACGCTCTCCAGCCCTACCCCAGAAAATGCCCCGGAA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCAGCTTAATGGCGTCTaGGTTATCCGCAGAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIQLNGV*VIRRAH Trigger: GTGGGCTCTGCGGATAACTCAGACGCCATTAAGCTG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCAGTCCCTGGCTGGGTaGTCTCTGGGATTTTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIQSLAG*SLGFLG Trigger: TCCTAAAAATCCCAGAGAGCACCCAGCCAGGGACTG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGCTCTGGGTATTTTCTaGCATCTCCGCGATTATGCG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIALGIF*HLRDYA Trigger: CGCATAATCGCGGAGATGGCAGAAAATACCCAGAGC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTATCCAAGACGACAATaGGAATTGTGGTGGTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIYPRRQ*ELWWSR Trigger: CCGGGACCACCACAATTCGCATTGTCGTCTTGGATA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAACACAGTCCCTGGCTaGGTGCTCTCTGGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEINTVPG*VLSGIF Trigger: AAAAATCCCAGAGAGCACCCAGCCAGGGACTGTGTT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTCTTCACCAGCGCCCTaGGGCAAAAGGTTAGGAATA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISSPAP*GKRLGI Trigger: TATTCCTAACCTTTTGCCCCAGGGCGCTGGTGAAGA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAATTTGTGTGGCACCTaGGGTGCCAGTGATGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEINLCGT*GASDVS Trigger: TGAAACATCACTGGCACCCCAGGTGCCACACAAATT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCCGATCTTTCTTGACTaGTTTCCACAAGAACGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIPIFLD*FPQERS Trigger: GCTTCGTTCTTGTGGAAATCAGTCAAGAAAGATCGG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTGCCTCGAAATCCAATaGCCTTTTCAGGCGAATTTC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEICLEIQ*PFQANF Trigger: GAAATTCGCCTGAAAAGGGCATTGGATTTCGAGGCA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGAATCCGATCTTTCTTaGCTGATTTCCACAAGAACG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIESDLS*LISTRT Trigger: CGTTCTTGTGGAAATCAGTCAAGAAAGATCGGATTC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAACACTTGGACAGCATaGAGTTCAACAGACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEINTWTA*SSTDKS Trigger: GGATTTGTCTGTTGAACTTCATGCTGTCCAAGTGTT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTCCACCCAGATGATTTaGATAAATAACCGCGAATCC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISTQMI*INNRES Trigger: GGATTCGCGGTTATTTATGCAAATCATCTGGGTGGA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCCTTCTTTTAGAGTTTaGATTCCCCAGCTTAATGGC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIPSFRV*IPQLNG Trigger: GCCATTAAGCTGGGGAATCCAAACTCTAAAAGAAGG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAAGGGGAGATCATTCTaGATGGAGCAAATCATCCTA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIKGRSF*MEQIIL Trigger: TAGGATGATTTGCTCCATCCAGAATGATCTCCCCTT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAGCTGCAGATCAGTTTaGAAAAACTGCACTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISCRSV*KNCTGF Trigger: AAATCCAGTGCAGTTTTTTCAAACTGATCTGCAGCT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGGTCATTTATATCTGTaGGCTGCAGATCAGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIGHLYL*AADQFE Trigger: TTCAAACTGATCTGCAGCTCACAGATATAAATGACC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR TCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTCTATTACAAATGGTTaGGTAACTTCATCGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISITNG*VTSSPW Trigger: CCAAGGCGATGAAGTTACTCAACCATTTGTAATAGA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAGTTCTGAACAGTGTTaGTACCTATGTCAAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISSEQC*YLCQSP Trigger: AGGACTTTGACATAGGTAGCAACACTGTTCAGAACT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGTTATAATATGGAGTTaGCTCGAAATCCAATGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIVIIWS*LEIQCP Trigger: AGGGCATTGGATTTCGAGGCAACTCCATATTATAAC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCCTATGTCAAAGTCCTaGGCTATTTTTAAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIPMSKS*AIFKGN Trigger: GTTTCCCTTAAAAATAGCCCAGGACTTTGACATAGG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCTCGTCTATTACAAATaGTTGAGTAACTTCATCGCC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEILVYYK*LSNFIA Trigger: GGCGATGAAGTTACTCAACCATTTGTAATAGACGAG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTTTCAGGCGAATTTCTaGTGTTTTCTCGTCTATTAC | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIFQANF*CFLVYY Trigger: GTAATAGACGAGAAAACAGCAGAAATTCGCCTGAAA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTTCCACGTTATAATATaGAGTTGCCTCGAAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIFHVII*SCLEIQ Trigger: TTGGATTTCGAGGCAACTCCATATTATAACGTGGAA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAAAGTTTGGGATAAATaGCAGAAAACAACGCGTCAT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIKVWDK*QKTTRH Trigger: ATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAATCAACAGCATGCATaGATTTGGAATGACACTATG | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEINQQHA*IWNDTM Trigger: CATAGTGTCATTCCAAATCCATGCATGCTGTTGATT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR GCA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCATATAGAAGCAAATTaGCGGTCTTTATATCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIHIEAN*RSLYQA Trigger: AGCTTGATATAAAGACCGGCAATTTGCTTCTATATG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAGACGACAATGCGAATaGTGGTGGTCCCGGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIRRQCE*WWSRTW Trigger: CCAGGTCCGGGACCACCACAATTCGCATTGTCGTCT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCTAGCGCAGTCTCCATaGTTCAGACCCGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEILAQSP*FRPGPE Trigger: TTCTGGACCGGGTCTGAACAATGGAGACTGCGCTAG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCAAGACCCAGGTCTTTaGCCAGGTTGGCCACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIQDPGL*PGWPQN Trigger: ATTCTGTGGCCAACCTGGCAAAAGACCTGGGTCTTG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCAAATCATCCTACCGTaGTCCCCGGAGTCTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIQIILP*SPESGS Trigger: TGATCCAGACTCCGGGGACAACGGTAGGATGATTTG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTTTTCTGTGGCGTTTTaGCTAGCGCAGTCTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIFSVAF*LAQSPL Trigger: CAATGGAGACTGCGCTAGCAAAAACGCCACAGAAAA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCGTTATAATATGGAGTaGCCTCGAAATCCAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIRYNME*PRNPMP Trigger: GGGCATTGGATTTCGAGGCAACTCCATATTATAACG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAAAAATTCGGGGGCGTaGTCATTATTATCCAAGACG | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIKNSGA*SLLSKT Trigger: CGTCTTGGATAATAATGACAACGCCCCCGAATTTTT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS GCA 90 bp | GGCTACAATTTCCACGTTATAATATGGAGTTGCCTCGAAATCCAATaGCCTTTTCAGGCGAATTTCTGCTGTTTTCTCGTCTATTACAAA | + |
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Preference number: 5 (lower is better) Translates to: GYNFHVIIWSCLEIQ*PFQANFCCFLVYYK Trigger: TTTGTAATAGACGAGAAAACAGCAGAAATTCGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAAATTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCAGCAAGAAACATAACTaGCCTTTTCTGTGGCGTTTT | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISKKHN*PFLWRF Trigger: AAAACGCCACAGAAAAGGCAAGTTATGTTTCTTGCT...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCGTCTATTACAAATGGTaGAGTAACTTCATCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEIVYYKW*SNFIAL Trigger: CAAGGCGATGAAGTTACTCAACCATTTGTAATAGAC...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCTCAAGGTGAAATTTTaGTCCATGACACTCTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEILKVKF*SMTLSN Trigger: ATTCGAGAGTGTCATGGACAAAAATTTCACCTTGAG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCTCATATAGAAGCAAATaGCCGGTCTTTATATCAAGC | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEISYRSK*PVFISS Trigger: GCTTGATATAAAGACCGGCAATTTGCTTCTATATGA...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGAAAAAGTTTGGGATAAATGGCAGAAAACAACGCGTCATCACGAGATCCTGTTTTTAAAAAGTTaGCTAATAGGACTCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: RSEKVWDKWQKTTRHHEILFLKS*LIGLRA Trigger: AGCCCTGAGTCCTATTAGCAAACTTTTTAAAAACAG...GATCTCGTGATGACGCGTTGTTTTCTGCCATTTATCCCAAACTTTTTCAGATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS TCA 72 bp | ATGATTTGCATAAATAACCGCGAATCCGATCTTTCTTaGCTGATTTCCACAAGAACGAAGCCCACCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: MICINNRESDLS*LISTRTKPTLK Trigger: CTTCAGGGTGGGCTTCGTTCTTGTGGAAATCAGTCAAGAAAGATCGGATTCGCGGTTATTTATGCAAATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS GCA 72 bp | TTCCACGTTATAATATGGAGTTGCCTCGAAATCCAATaGCCTTTTCAGGCGAATTTCTGCTGTTTTCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: FHVIIWSCLEIQ*PFQANFCCFLV Trigger: GACGAGAAAACAGCAGAAATTCGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS GCA 72 bp | ATCTGTGGCTACAATTTCCACGTTATAATATGGAGTTaGCTCGAAATCCAATGCCCTTTTCAGGCGAATTTC | + |
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Preference number: 6 (lower is better) Translates to: ICGYNFHVIIWS*LEIQCPFQANF Trigger: GAAATTCGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAAATTGTAGCCACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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| CDS CAA 72 bp | CATCTGTGGCTACAATTTCCACGTTATAATATGGAGTaGCCTCGAAATCCAATGCCCTTTTCAGGCGAATTT | + |
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Preference number: 6 (lower is better) Translates to: HLWLQFPRYNME*PRNPMPFSGEF Trigger: AAATTCGCCTGAAAAGGGCATTGGATTTCGAGGCAACTCCATATTATAACGTGGAAATTGTAGCCACAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231134.8 |
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