Pregenerated sensors for PCDHB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000081818Ensembl transcript IDs: ENST00000194152.4, ENST00000623478.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGTCACTAGACATGTGGTaGTCACAAGAGGAAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: TRRPMMLSRVLILGRNLGSLDMW*SQEEKD Trigger: GTCCTTTTCCTCTTGTGACCACCACATGTCTAGTGA...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| 3UTR-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGATTGCAGTGGGAAGTTaGACAAAACTAACGGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: IFVKAVHICKVMYSEKPEIAVGS*TKLTGG Trigger: ACCGCCCGTTAGTTTTGTCAAACTTCCCACTGCAAT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| 3UTR-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGAATTTCGTGATTCTTTaGAAAGATGGGGAGAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: IFVKAVHICKVMYSEKPENFVIL*KDGEKL Trigger: CAGCTTCTCCCCATCTTTCAAAAGAATCACGAAATT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| 3UTR TCA 72 bp | TGCAAAGTAATGTACAGTGAAAAACCTGAGATCAACTaGTTATCAGATTTAAACAGAATAGCCAAGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: CKVMYSEKPEIN*LSDLNRIAKVQ Trigger: CTGCACCTTGGCTATTCTGTTTAAATCTGATAATCAGTTGATCTCAGGTTTTTCACTGTACATTACTTTGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGAGACAGCACCCGGGCTaGCCGGGAGGCCAGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPERQHPG*PGGQFP Trigger: GGGGAACTGGCCTCCCGGTCAGCCCGGGTGCTGTCT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGGGCTCGAGGCGAACCTaGGACAAGAACACCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGGSRRT*DKNTIK Trigger: TTTGATGGTGTTCTTGTCTCAGGTTCGCCTCGAGCC...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGAAGCTGAACTCAGGCTaGTCCTCTCGATCCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGKLNSG*SSRSSG Trigger: ACCACTGGATCGAGAGGAGCAGCCTGAGTTCAGCTT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGGACCTGCACCCCATATaGAGTGTGCACAAACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGDLHPI*SVHKLR Trigger: CCTGAGTTTGTGCACACTCCATATGGGGTGCAGGTC...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGACCCCATATGGAGTGTaGACAAACTCAGGAGCATTG | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGTPYGV*TNSGAL Trigger: CAATGCTCCTGAGTTTGTGCACACTCCATATGGGGT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGTTTGAAGACCATTGCTaGCCACATCCAAATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGFEDHC*PHPNPQ Trigger: CTGAGGATTTGGATGTGGGCAGCAATGGTCTTCAAA...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGAGATCCTTGGCCAGATaGGCTACAAAGGAGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPERSLAR*ATKEPL Trigger: GAGCGGCTCCTTTGTAGCCCATCTGGCCAAGGATCT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGAGCAAATCTCCAGTCTaGCGATCCAGCTGCAAACGC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPESKSPV*RSSCKR Trigger: GCGTTTGCAGCTGGATCGTCAGACTGGAGATTTGCT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTCCAGCTGCAAACGCTaGTTGTCATCGTCAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPESSCKR*LSSSDS Trigger: GCTGTCTGACGATGACAAGCAGCGTTTGCAGCTGGA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGAACCGCAACGAGACTTaGGACATTCAATTCCAATTT | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGNRNET*DIQFQF Trigger: AAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCATCCACCACCTCTATaGCTACAGTGCCTTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPEHPPPL*LQCLFQ Trigger: CTGGAAAAGGCACTGTAGTCATAGAGGTGGTGGATG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTCCCTCCCGGTGTCCTaGACCAAGAGATTAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPESLPVS*TKRLGN Trigger: ATTTCCTAATCTCTTGGTTCAGGACACCGGGAGGGA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGTTCCAATTTCTTGCTTaGAGGAATCGTCACACAGTT | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGFQFLA*RNRHTV Trigger: AACTGTGTGACGATTCCTCCAAGCAAGAAATTGGAA...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCTCCTCTCGATCCAGTaGTTTGTCCTGCACCAAATC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPELLSIQ*FVLHQI Trigger: GATTTGGTGCAGGACAAACCACTGGATCGAGAGGAG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGACAGTATTTCTCCCGTaGCTTCATTTATTGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGTVFLP*LHLLRK Trigger: CTTTCTCAATAAATGAAGTCACGGGAGAAATACTGT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGAATAGAGTACCCGGCTaGCTATTTTCTAGTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLILGRNLGNRVPG*LFSSIF Trigger: GAAAATACTAGAAAATAGCCAGCCGGGTACTCTATT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGGTCCTGCACCAAATCTaGGTATTTCTTGCCCTCACT | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPEVLHQI*VFLALT Trigger: AGTGAGGGCAAGAAATACCCAGATTTGGTGCAGGAC...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| 3UTR CAA 72 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTaGGGGAGAAATTTAGGGCTTATTTCAGATTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TRRPMMLSRVLI*GRNLGLISDSE Trigger: CTCAGAATCTGAAATAAGCCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGGATGGAGCTGGTGAGTaGAGATATGATAAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPEDGAGE*RYDKFW Trigger: CCAGAACTTATCATATCTTCACTCACCAGCTCCATC...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTGTTTAGTATATCGCTaGCCCAAGCCGTTGGTAAAC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPECLVYR*PKPLVN Trigger: GTTTACCAACGGCTTGGGGCAGCGATATACTAAACA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTCCAGTGGTTTGTCCTaGACCAAATCTGGGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPESSGLS*TKSGYF Trigger: GAAATACCCAGATTTGGTGCAGGACAAACCACTGGA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCTAGCTTCTTCATGTTaGAGTCCAGGTCCCTATATC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPELASSC*SPGPYI Trigger: GATATAGGGACCTGGACTCCAACATGAAGAAGCTAG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGGGGAATATTGGAGAGTaGTCATTTATGTCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPEGNIGE*SFMSWI Trigger: GATCCAGGACATAAATGATCACTCTCCAATATTCCC...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR TCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCTGATTGTGTATTTTTaGAGACCATTGCTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPELIVYF*RPLLPT Trigger: TGTGGGCAGCAATGGTCTTCAAAAATACACAATCAG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGATTTCCAGGAACACTTaGAAATGCAGTACACACGGT | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPEISRNT*KCSTHG Trigger: ACCGTGTGTACTGCATTTCCAAGTGTTCCTGGAAAT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR GCA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTCAATTCCAATTTCTTaGTTGGAGGAATCGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: IFVKAVHICKVMYSEKPESIPIS*LEESSH Trigger: GTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS CCA 90 bp | CCAACACTTGCCTGTTTGGATGAATTCTCCCTAGCTTCTTCATGTTaGAGTCCAGGTCCCTATATCCAATCCCCTCAGCAACCGCAACGA | + |
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Preference number: 5 (lower is better) Translates to: PTLACLDEFSLASSC*SPGPYIQSPQQPQR Trigger: TCGTTGCGGTTGCTGAGGGGATTGGATATAGGGACCTGGACTCCAACATGAAGAAGCTAGGGAGAATTCATCCAAACAGGCAAGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGCGCTGCCCCAAGCCGTaGGTAAACCTGCACTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGRCPKP*VNLHCL Trigger: CAAGCAGTGCAGGTTTACCAACGGCTTGGGGCAGCG...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS TCA 90 bp | GTCCAGGTCCCTATATCCAATCCCCTCAGCAACCGCAACGAGACTTaGGACATTCAATTCCAATTTCTTGCTTGGAGGAATCGTCACACA | + |
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Preference number: 5 (lower is better) Translates to: VQVPISNPLSNRNET*DIQFQFLAWRNRHT Trigger: TGTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTGCTGAGGGGATTGGATATAGGGACCTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGCCAACACTTGCCTGTTaGGATGAATTCTCCCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGPTLAC*DEFSLA Trigger: AGCTAGGGAGAATTCATCCAAACAGGCAAGTGTTGG...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGATTGCAGTGGGAAGTTaGACAAAACTAACGGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGIAVGS*TKLTGG Trigger: ACCGCCCGTTAGTTTTGTCAAACTTCCCACTGCAAT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGAGCTGCAAACGCTGCTaGTCATCGTCAGACAGCACC | + |
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Preference number: 5 (lower is better) Translates to: IFVKAVHICKVMYSEKPESCKRC*SSSDST Trigger: GGTGCTGTCTGACGATGACAAGCAGCGTTTGCAGCT...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGGCTGATTGTGTATTTTaGAAGACCATTGCTGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGADCVF*KTIAAH Trigger: GTGGGCAGCAATGGTCTTCAAAAATACACAATCAGC...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGATTCCAATTTCTTGCTaGGAGGAATCGTCACACAGT | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGIPISC*EESSHS Trigger: ACTGTGTGACGATTCCTCCAAGCAAGAAATTGGAAT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGTCAGGAGCATTGTCATaGATGTCCATGATCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGSGALS*MSMIRI Trigger: AATCCTGATCATGGACATCAATGACAATGCTCCTGA...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGAATAAAGGCCAACACTaGCCTGTTTGGATGAATTCT | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGNKGQH*PVWMNS Trigger: AGAATTCATCCAAACAGGCAAGTGTTGGCCTTTATT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ACAAGGAGACCTATGATGCTCTCAAGAGTCTTGATTTTGGGGAGAAATTTAGGGAAGCTATTTCTGAACTaGGGGTTTTCCTTAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: TRRPMMLSRVLILGRNLGKLFLN*GFSLTS Trigger: GGAAGTTAAGGAAAACCCCAAGTTCAGAAATAGCTT...CCCTAAATTTCTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCCTAGCTTCTTCATGTaGGAGTCCAGGTCCCTATAT | + |
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Preference number: 5 (lower is better) Translates to: IFVKAVHICKVMYSEKPEPSFFM*ESRSLY Trigger: ATATAGGGACCTGGACTCCAACATGAAGAAGCTAGG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGCAACCGCAACGAGACTaGAGACATTCAATTCCAATT | + |
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Preference number: 5 (lower is better) Translates to: IFVKAVHICKVMYSEKPEQPQRD*RHSIPI Trigger: AATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTG...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS-3UTR CAA 90 bp | ATTTTTGTAAAGGCTGTCCATATCTGCAAAGTAATGTACAGTGAAAAACCTGAGTCAAGAGTCTTGATTTaGGGGAGAAATTTAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: IFVKAVHICKVMYSEKPESRVLI*GRNLGL Trigger: AAGCCCTAAATTTCTCCCCAAAATCAAGACTCTTGA...CTCAGGTTTTTCACTGTACATTACTTTGCAGATATGGACAGCCTTTACAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS TCA 72 bp | CAAACGCTGCTTGTCATCGTCAGACAGCACCCGGGCTaGCCGGGAGGCCAGTTCCCCAATTCCCAGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QTLLVIVRQHPG*PGGQFPNSQAQ Trigger: CTGGGCCTGGGAATTGGGGAACTGGCCTCCCGGTCAGCCCGGGTGCTGTCTGACGATGACAAGCAGCGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS CCA 72 bp | GCCTGTTTGGATGAATTCTCCCTAGCTTCTTCATGTTaGAGTCCAGGTCCCTATATCCAATCCCCTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ACLDEFSLASSC*SPGPYIQSPQQ Trigger: TTGCTGAGGGGATTGGATATAGGGACCTGGACTCCAACATGAAGAAGCTAGGGAGAATTCATCCAAACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194152.4 |
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| CDS CAA 90 bp | AGTCCAGGTCCCTATATCCAATCCCCTCAGCAACCGCAACGAGACTaGAGACATTCAATTCCAATTTCTTGCTTGGAGGAATCGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SPGPYIQSPQQPQRD*RHSIPISCLEESSH Trigger: GTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTGCTGAGGGGATTGGATATAGGGACCTGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS CCA 72 bp | ATCTGTTTGGATGAATTCTCCCTAGCTTCTTCATGTTaGAGTCCAGGTCCCTATATCCAATCCCCTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ICLDEFSLASSC*SPGPYIQSPQQ Trigger: TTGCTGAGGGGATTGGATATAGGGACCTGGACTCCAACATGAAGAAGCTAGGGAGAATTCATCCAAACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623478.1 |
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| CDS CAA 72 bp | CCCTATATCCAATCCCCTCAGCAACCGCAACGAGACTaGAGACATTCAATTCCAATTTCTTGCTTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PYIQSPQQPQRD*RHSIPISCLEE Trigger: TTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTGCTGAGGGGATTGGATATAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS TCA 72 bp | CCTATATCCAATCCCCTCAGCAACCGCAACGAGACTTaGGACATTCAATTCCAATTTCTTGCTTGGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PISNPLSNRNET*DIQFQFLAWRN Trigger: ATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTGCTGAGGGGATTGGATATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS CAA 90 bp | TTCTTGCTTGGAGGAATCGTCACACAGTTGCTTTTAATATTAAATTaGTTTAGTATATCGCTGCCCCAAGCCGTTGGTAAACCTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: FLLGGIVTQLLLILN*FSISLPQAVGKPAL Trigger: CAGTGCAGGTTTACCAACGGCTTGGGGCAGCGATATACTAAACAAATTTAATATTAAAAGCAACTGTGTGACGATTCCTCCAAGCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS CAA 90 bp | CCCTCAGCAACCGCAACGAGACTTGAGACATTCAATTCCAATTTCTaGCTTGGAGGAATCGTCACACAGTTGCTTTTAATATTAAATTTG | + |
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Preference number: 6 (lower is better) Translates to: PSATATRLETFNSNF*LGGIVTQLLLILNL Trigger: CAAATTTAATATTAAAAGCAACTGTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGTTGCTGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS CAA 72 bp | ACCGCAACGAGACTTGAGACATTCAATTCCAATTTCTaGCTTGGAGGAATCGTCACACAGTTGCTTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: TATRLETFNSNF*LGGIVTQLLLI Trigger: TATTAAAAGCAACTGTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTCAAGTCTCGTTGCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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| CDS CAA 90 bp | GAGACATTCAATTCCAATTTCTTGCTTGGAGGAATCGTCACACAGTaGCTTTTAATATTAAATTTGTTTAGTATATCGCTGCCCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ETFNSNFLLGGIVTQ*LLILNLFSISLPQA Trigger: GGCTTGGGGCAGCGATATACTAAACAAATTTAATATTAAAAGCAACTGTGTGACGATTCCTCCAAGCAAGAAATTGGAATTGAATGTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000194152.4 ENST00000623478.1 |
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