Pregenerated sensors for PCDHB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000113205Ensembl transcript IDs: ENST00000231130.3
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTaGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: NYFPVLLMKPKPSLD*IFCSILATCLEPDQ Trigger: TTGGTCTGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| 3UTR-3UTR GCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTCTATTCTTGCTACTTaGCTTGAACCAGACCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFSILAT*LEPDQK Trigger: TTTTTGGTCTGGTTCAAGGCAAGTAGCAAGAATAGA...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATAAGCTGAGTTCCGGCTaGTCCTCCGGATCGAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDKLSSG*SSGSSA Trigger: AGCGCTCGATCCGGAGGAGCAGCCGGAACTCAGCTT...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAGGAATGTCGCCAAGCTaGACCTCAGACAGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPGMSPS*TSDRAG Trigger: CCCAGCTCTGTCTGAGGTTCAGCTTGGCGACATTCC...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATCTGCGAGTGAGTACGTaGAAGTGGGAATTCGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDLRVST*KWEFGV Trigger: CACTCCGAATTCCCACTTCCACGTACTCACTCGCAG...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCACACAGAATAGCGTCTTaGCTCGGACCCAGCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPHRIAS*LGPSQR Trigger: TCTCTGGCTGGGTCCGAGTCAAGACGCTATTCTGTG...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCACCCTACGACTGCGAGTaGGTACGTGGAAGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPPYDCE*VRGSGN Trigger: ATTCCCACTTCCACGTACTCACTCGCAGTCGTAGGG...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCATCCTCCCGCCTCCATTaGACTTTCCGTCACGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPSSRLH*TFRHAL Trigger: AAGAGCGTGACGGAAAGTGCAATGGAGGCGGGAGGA...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATGCTCAAAAATCTGCCTaGGCTCTCAACCGCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDAQKSA*ALNRWF Trigger: AAACCAGCGGTTGAGAGCCCAGGCAGATTTTTGAGC...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATCAAGGTCAGTTCCGGTaGGTTGTCGTTGACATCAAC | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDQGQFR*VVVDIN Trigger: GTTGATGTCAACGACAACCCACCGGAACTGACCTTG...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAGAGGCTCAGACTTGCTaGCTCAAAAATCTGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPEAQTC*LKNLPG Trigger: CCCAGGCAGATTTTTGAGCCAGCAAGTCTGAGCCTC...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTGGCCTCCGCCATCCTTaGCCTCGATGTCGACTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLMKPKPSLDLIFCSILAGLRHP*PRCRLH Trigger: ATGAAGTCGACATCGAGGCCAAGGATGGCGGAGGCC...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATCACCTGTCTGATGACTaGGCTGAAAATGCTGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDHLSDD*AENAVC Trigger: ACAAACAGCATTTTCAGCTCAGTCATCAGACAGGTG...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTCCGGTGGGTTGTCGTTaGCATCAACCACCTGGACTA | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFPVGCR*HQPPGL Trigger: TAGTCCAGGTGGTTGATGTCAACGACAACCCACCGG...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR TCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAAATAGGGCTGTTTACTaGAGACAAGGTCAGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPNRAVY*RQGQFR Trigger: CCGGAACTGACCTTGTCTTCAGTAAACAGCCCTATT...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTGCTGGCTCAAAAATCTaGCTGGGCTCTCAACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFAGSKI*LGSQPL Trigger: CAGCGGTTGAGAGCCCAGGCAGATTTTTGAGCCAGC...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATCTGTTCCTGGCAGAGTaGTTTCTAGGATTTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDLFLAE*FLGFSD Trigger: ATCTGAAAATCCTAGAAAGCACTCTGCCAGGAACAG...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTCCAGAGGCTCAGACTTaGTGGCTCAAAAATCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLMKPKPSLDLIFCSILAPEAQT*WLKNLP Trigger: AGGCAGATTTTTGAGCCAGCAAGTCTGAGCCTCTGG...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCATGGGAAACAGTCTTTTaGCCCACAACCTTTGTAGAC | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPWETVF*PTTFVD Trigger: GTCTACAAAGGTTGTGGGGCAAAAGACTGTTTCCCA...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATGATCCTTTGCTAGGTTaGCTATTAAAAAGCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDDPLLG*LLKSPS Trigger: AGAAGGGCTTTTTAATAGCCAACCTAGCAAAGGATC...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATAAAATTCTCTACAGATaGTTTCAGGAAGAAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDKILYR*FQEEGE Trigger: CTCCCCTTCTTCCTGAAACCATCTGTAGAGAATTTT...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTAACCTCAGACAGAGCTaGGAAACAGTCTTTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFNLRQS*ETVFCP Trigger: GGGGCAAAAGACTGTTTCCCAGCTCTGTCTGAGGTT...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTGTGAGTACGTGGAAGTaGGAATTCGGAGTGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLMKPKPSLDLIFCSILAVSTWK*EFGVIV Trigger: CACTATCACTCCGAATTCCCACTTCCACGTACTCAC...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCACGGCTGTGCAAATTCTaGTGCATTGTCGTTTATATC | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPRLCKF*CIVVYI Trigger: GATATAAACGACAATGCACCAGAATTTGCACAGCCG...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAGGAGATTGTTCTCAATaGAACACATCACTCTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPGDCSQ*NTSLFR Trigger: ACGGAAGAGTGATGTGTTCCATTGAGAACAATCTCC...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTCTCATAGAGCGGCTGTaGAAATTCTGGTGCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFLIERL*KFWCIV Trigger: GACAATGCACCAGAATTTGCACAGCCGCTCTATGAG...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTGAATTAAGACTGCGTTaGCAAGCCAGGATGAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LLMKPKPSLDLIFCSILAELRLR*QARMKG Trigger: TCCTTTCATCCTGGCTTGCCAACGCAGTCTTAATTC...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCACTGGATTTGATATTTTaGTCTATTCTTGCTACTTGC | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPLDLIF*SILATC Trigger: GCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAG...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAATAAAATTGGTGGTTTaGAACTCTCTCTACATTGCT | + |
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Preference number: 4 (lower is better) Translates to: KPSLDLIFCSILATCLEPIKLVV*NSLYIA Trigger: AGCAATGTAGAGAGAGTTCCAAACCACCAATTTTAT...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR GCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTAAGAGAAGCAAGACTTaGCTTTGTCTAAGAAATCGC | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFKRSKT*LCLRNR Trigger: GCGATTTCTTAGACAAAGGCAAGTCTTGCTTCTCTT...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CCA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTTGACATCAACCACCTaGACTATGACTGTAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFLTSTT*TMTVDF Trigger: AAAGTCTACAGTCATAGTCCAGGTGGTTGATGTCAA...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATGGAATTAAGACTGCGTaGGCAAGCCAGGATGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDGIKTA*ASQDER Trigger: CCTTTCATCCTGGCTTGCCAACGCAGTCTTAATTCC...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCATCCAGAGGCTCAGACTaGCTGGCTCAAAAATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: KPSLDLIFCSILATCLEPSRGSD*LAQKSA Trigger: GGCAGATTTTTGAGCCAGCAAGTCTGAGCCTCTGGA...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTCCACAGAATAGCGTCTaGACTCGGACCCAGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFPQNSV*TRTQPE Trigger: CTCTGGCTGGGTCCGAGTCAAGACGCTATTCTGTGG...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTTGCTGTTTGTTCCCTTaGGACACAACTTGGGCCCCC | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILACCLFP*DTTWAP Trigger: GGGGGCCCAAGTTGTGTCCAAAGGGAACAAACAGCA...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTTCCGGTGGGTTGTCGTaGACATCAACCACCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILASGGLS*TSTTWT Trigger: AGTCCAGGTGGTTGATGTCAACGACAACCCACCGGA...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATAGATCCTTTGCTAGGTaGGCTATTAAAAAGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDRSFAR*AIKKPF Trigger: GAAGGGCTTTTTAATAGCCAACCTAGCAAAGGATCT...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | GAGCCACACAACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATGCAAATTCTGGTGCATaGTCGTTTATATCTAAGACC | + |
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Preference number: 5 (lower is better) Translates to: EPHNYFPVLLMKPKPSLDANSGA*SFISKT Trigger: GGTCTTAGATATAAACGACAATGCACCAGAATTTGC...ATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTTGTGTGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTCTGGGAAACAGTCTTTaGCCCCACAACCTTTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFLGNSL*PHNLCR Trigger: TCTACAAAGGTTGTGGGGCAAAAGACTGTTTCCCAG...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTAAGCAAGACTTGCCTTaGTCTAAGAAATCGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILAKQDLP*SKKSLS Trigger: GGAGAGCGATTTCTTAGACAAAGGCAAGTCTTGCTT...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTAGTGATAGTGTAGTTTaGGAGGCTGTTTCTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILASDSVV*EAVSSH Trigger: GTGGGAAGAAACAGCCTCCAAAACTACACTATCACT...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTCACATCACTCTTCCGTaGTCTCCAGAGTCTAGATCA | + |
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Preference number: 5 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFHITLP*SPESRS Trigger: TGATCTAGACTCTGGAGACAACGGAAGAGTGATGTG...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAAAGCCATCCCTGGATTaGATATTTTGCTCTATTCTT | + |
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Preference number: 5 (lower is better) Translates to: KPSLDLIFCSILATCLEPKPSLD*IFCSIL Trigger: AAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTACTTGCCTTGAACCAAGGGAAATTATAAAATaGGTGGTTTGGAACTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: KPSLDLIFCSILATCLEPREIIK*VVWNSL Trigger: GAGAGAGTTCCAAACCACCAATTTTATAATTTCCCT...TGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTTTAGTCCCAGATCCTTaGCTAGGTTGGCTATTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILALVPDP*LGWLLK Trigger: TTTTAATAGCCAACCTAGCAAAGGATCTGGGACTAA...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTTATTTTGCTCTATTCTaGCTACTTGCCTTGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILAYFALF*LLALNQ Trigger: CTGGTTCAAGGCAAGTAGCAAGAATAGAGCAAAATA...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | AACTACTTTCCAGTACTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTAAAGAGAAGCAAGACTaGCCTTTGTCTAAGAAATCG | + |
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Preference number: 5 (lower is better) Translates to: NYFPVLLMKPKPSLDLIFKEKQD*PLSKKS Trigger: CGATTTCTTAGACAAAGGCAAGTCTTGCTTCTCTTT...AAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAGTACTGGAAAGTAGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS-3UTR CAA 90 bp | CTGTTAATGAAACCTAAGCCATCCCTGGATTTGATATTTTGCTCTATTCTTGCTCCTGGATTTGATATTTaGCTCTATTCTTGCTACTTG | + |
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Preference number: 5 (lower is better) Translates to: LLMKPKPSLDLIFCSILAPGFDI*LYSCYL Trigger: CAAGTAGCAAGAATAGAGCAAAATATCAAATCCAGG...AGCAAGAATAGAGCAAAATATCAAATCCAGGGATGGCTTAGGTTTCATTAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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| CDS CCA 72 bp | GCATTGTCGTTTATATCTAAGACCTGGATGTTTATCTaGGCTGTCCCAGACCGAGGGGGAGAGCCGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSFISKTWMFI*AVPDRGGEPPS Trigger: GGACGGCGGCTCTCCCCCTCGGTCTGGGACAGCCCAGATAAACATCCAGGTCTTAGATATAAACGACAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000231130.3 |
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