Pregenerated sensors for PCDHB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000112852Ensembl transcript IDs: ENST00000194155.7, ENST00000622947.1, ENST00000624874.1, ENST00000625033.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCGCTGTGGTAATATTATaGCATCGAGACTGTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAAVVIL*HRDCLV Trigger: TACAAGACAGTCTCGATGGCATAATATTACCACAGC...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000624874.1 |
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| 3UTR-3UTR GCA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAGCTGTGGTAATATTATaGCATCGAGACTGTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: STTSIRTRAVPDLGGLPPAVVIL*HRDCLV Trigger: TACAAGACAGTCTCGATGGCATAATATTACCACAGC...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000624874.1 |
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| 3UTR-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGCGGCGAGCCGAGATTaGGCCATTGCACTCCACTAC | + |
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Preference number: 2 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFAASRD*AIALHY Trigger: GTAGTGGAGTGCAATGGCGCAATCTCGGCTCGCCGC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR CCA 90 bp | AAATCCAGTTTCTGTCTTAAAAGCAGTTCTCCCGATTTTGCACTTAATCGAAACGAGACGATGGCAACCTaGGATCCAACGGGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: KSSFCLKSSSPDFALNRNETMAT*DPTGLS Trigger: GGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTC...GTTTCGATTAAGTGCAAAATCGGGAGAACTGCTTTTAAGACAGAAACTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| 3UTR-3UTR CCA 90 bp | AAATCCAGTTTCTGTCTTAAAAGCAGTTCTCCCGATTTTGCACTTAATCGAAACCCCTGGCAGAGACGATaGCAACCTGGGATCCAACGG | + |
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Preference number: 2 (lower is better) Translates to: KSSFCLKSSSPDFALNRNPWQRR*QPGIQR Trigger: CCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGG...GTTTCGATTAAGTGCAAAATCGGGAGAACTGCTTTTAAGACAGAAACTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| 3UTR-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCCGAGATTGCGCCATTaGACTCCACTACAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFPRLRH*TPLQPE Trigger: CTCAGGCTGTAGTGGAGTGCAATGGCGCAATCTCGG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAGTTCAAGACCAACCTaGCCAACATGGAGACACCCT | + |
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Preference number: 2 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFSSRPT*PTWRHP Trigger: AGGGTGTCTCCATGTTGGTCAGGTTGGTCTTGAACT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTATAGACTGTGAGGTCTaGAAAAGATGCTCTAACTTA | + |
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Preference number: 2 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFIDCEV*KRCSNL Trigger: TAAGTTAGAGCATCTTTTCCAGACCTCACAGTCTAT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGAGGTCTGGAAAAGATaGTCTAACTTAAAGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFEVWKR*SNLKIS Trigger: AGAAATCTTTAAGTTAGAGCATCTTTTCCAGACCTC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACCTTAATCGAAACGTTTaGCGAATGTCTTCAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNLNRNV*RMSSDA Trigger: AGCATCTGAAGACATTCGCAAAACGTTTCGATTAAG...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| 3UTR-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTGCGGCGAGCCGAGATaGCGCCATTGCACTCCACTA | + |
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Preference number: 3 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFCGEPR*RHCTPL Trigger: TAGTGGAGTGCAATGGCGCAATCTCGGCTCGCCGCA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACATTCAAATCCATCACTaGGACAAATACCACACAAGT | + |
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Preference number: 3 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNIQIHH*DKYHTS Trigger: ACTTGTGTGGTATTTGTCCAAGTGATGGATTTGAAT...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| 3UTR TCA 72 bp | ACAGCAATGAGGGTGTCCTGCAAGTTTTCTGGGATCTaGTTGATAAGTGTCGACATAGTTAGTTCCGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: TAMRVSCKFSGI*LISVDIVSSGG Trigger: TCCTCCGGAACTAACTATGTCGACACTTATCAATCAGATCCCAGAAAACTTGCAGGACACCCTCATTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCTCCGTACCAGGGCCGTaGCGGACCTGGGTGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAISVPGP*RTWVDS Trigger: GGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGA...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCTCCGTACCAGGGCCGTaGCGGACCTGGGTGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRSVPGP*RTWVDS Trigger: GGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGA...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCGGGCCGTGCCGGACCTaGGTGGACTCCCGCCATCTA | + |
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Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRGPCRT*VDSRHL Trigger: TAGATGGCGGGAGTCCACCCAGGTCCGGCACGGCCC...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | AGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGCACCTCGGGCCGTGCCGGACCTaGGTGGACTCCCGCCATCTA | + |
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Preference number: 4 (lower is better) Translates to: RDDGNLGSNGAVLRDLHLGPCRT*VDSRHL Trigger: TAGATGGCGGGAGTCCACCCAGGTCCGGCACGGCCC...GAGGTGCAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCGAGACGATGGCAACCTaGGATCCAACGGGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAETMAT*DPTGLS Trigger: GGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTC...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | CCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGGAGACGATGGCAACCTaGGATCCAACGGGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PGRDDGNLGSNGAVLRDLETMAT*DPTGLS Trigger: GGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTC...CAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCACCCTGGCAGAGACGATaGCAACCTGGGATCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: STTSIRTRAVPDLGGLPPPWQRR*QPGIQR Trigger: CCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGG...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCCCCTGGCAGAGACGATaGCAACCTGGGATCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIPWQRR*QPGIQR Trigger: CCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGG...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGTTGTATTCGGATCTaGTCTCCCGGTCCAGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLAETMATWDPTGLSSGICCIRI*SPGPGP Trigger: CGGCCCTGGACCGGGAGACCAGATCCGAATACAACA...GATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR TCA 90 bp | TCCCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTCGCTGATACTGGGATaGGTGGACAATCCTAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SLAETMATWDPTGLSSGISLILG*VDNPRA Trigger: GGCCCTAGGATTGTCCACTCATCCCAGTATCAGCGA...GATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR TCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCTCGCTGATACTGGGATaGGTGGACAATCCTAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRSLILG*VDNPRA Trigger: GGCCCTAGGATTGTCCACTCATCCCAGTATCAGCGA...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR TCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCTCCCCGTATCTCGCTaGTACTGGGATGAGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRLPVSR*YWDEWT Trigger: TGTCCACTCATCCCAGTATCAGCGAGATACGGGGAG...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGGTCTCTCACCAAACGTaGTCCAGCTCTGGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: PGRDDGNLGSNGAVLRDLVSHQT*SSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGAC...CAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAGTCTCTCACCAAACGTaGTCCAGCTCTGGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: STTSIRTRAVPDLGGLPPVSHQT*SSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGAC...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCGTCTCTCACCAAACGTaGTCCAGCTCTGGCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIVSHQT*SSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGAC...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACT | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPANVLQL*LTLSLT Trigger: AGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTT...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACT | + |
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Preference number: 4 (lower is better) Translates to: SLAETMATWDPTGLSSGINVLQL*LTLSLT Trigger: AGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTT...GATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACT | + |
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Preference number: 4 (lower is better) Translates to: STTSIRTRAVPDLGGLPPNVLQL*LTLSLT Trigger: AGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTT...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCCCTACATCCAAGTCCTaGGCACGTTCTTTGTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAPTSKS*ARSLFR Trigger: CCGAAACAAAGAACGTGCCCAGGACTTGGATGTAGG...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCCTCATAGAGCAGCTTTaGAAACTCTGGGACGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPALIEQL*KLWDVV Trigger: GACAACGTCCCAGAGTTTGCAAAGCTGCTCTATGAG...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCTCATAGAGCAGCTTTaGAAACTCTGGGACGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRLIEQL*KLWDVV Trigger: GACAACGTCCCAGAGTTTGCAAAGCTGCTCTATGAG...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGCTCATAGAGCAGCTTTaGAAACTCTGGGACGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PGRDDGNLGSNGAVLRDLLIEQL*KLWDVV Trigger: GACAACGTCCCAGAGTTTGCAAAGCTGCTCTATGAG...CAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAGAAGATCATCTTGGATaGAGCACACCATCCTTCCGT | + |
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Preference number: 4 (lower is better) Translates to: STTSIRTRAVPDLGGLPPEDHLG*STPSFR Trigger: ACGGAAGGATGGTGTGCTCCATCCAAGATGATCTTC...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCCCTACATCCAAGTCCTaGGCACGTTCTATTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAPTSKS*ARSIKK Trigger: TTTCTTAATAGAACGTGCCCAGGACTTGGATGTAGG...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624874.1 |
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| CDS-3UTR TCA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAGTGGAAATTGGGACTaGTTGTGTAATTTTGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VHNFNPYQGRAGPGWTPASGNWD*LCNFGD Trigger: GTCTCCAAAATTACACAATCAGTCCCAATTTCCACT...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000624874.1 |
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| CDS-3UTR CCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCAAAGGAAGATCATCTTaGATGGAGCACACCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIKGRSS*MEHTIL Trigger: AAGGATGGTGTGCTCCATCCAAGATGATCTTCCTTT...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCGCTGTGGTAATATTATaGCATCGAGACTGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIAVVIL*HRDCLV Trigger: TACAAGACAGTCTCGATGGCATAATATTACCACAGC...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000622947.1 ENST00000624874.1 |
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| CDS-3UTR GCA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCGCGAATGTCTTCAGATaGTTGGGAAAATGCATAAGA | + |
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Preference number: 4 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIANVFR*LGKCIR Trigger: TCTTATGCATTTTCCCAAGCATCTGAAGACATTCGC...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACCCCGGTCCAGGGCCGTaGTTATCACCAGAGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNPGPGP*LSPECK Trigger: TTTACACTCTGGTGATAAGCACGGCCCTGGACCGGG...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CCA 90 bp | TCCCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCGTCCTGCAAGTTTTCTaGGATCTGATTGATAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLAETMATWDPTGLSSGIVLQVF*DLIDKC Trigger: ACACTTATCAATCAGATCCCAGAAAACTTGCAGGAC...GATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | AGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGCACCTCGCTGTGGTAATATTATaGCATCGAGACTGTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RDDGNLGSNGAVLRDLHLAVVIL*HRDCLC Trigger: ACAAAGACAGTCTCGATGGCATAATATTACCACAGC...GAGGTGCAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625033.1 |
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| CDS-3UTR CCA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCTTCAAATCCATCACTTaGACAAATACCACACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRFKSIT*TNTTQV Trigger: AACTTGTGTGGTATTTGTCCAAGTGATGGATTTGAA...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | AGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGCACCTCTTAATCGAAACGTTTTaGGAATGTCTTCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDDGNLGSNGAVLRDLHLLIETF*ECLQML Trigger: AAGCATCTGAAGACATTCGCAAAACGTTTCGATTAA...GAGGTGCAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTCCGTACCAGGGCCGTaGCGGACCTGGGTGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFSVPGP*RTWVDS Trigger: GGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGGGCCGTGCCGGACCTaGGTGGACTCCCGCCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFGPCRT*VDSRHL Trigger: TAGATGGCGGGAGTCCACCCAGGTCCGGCACGGCCC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACAGTGGAAATTGGGACTaGTTGTGTAATTTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNSGNWD*LCNFGD Trigger: GTCTCCAAAATTACACAATCAGTCCCAATTTCCACT...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACCTGTGTATGTCTGGATaGATTCGAAATCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNLCMSG*IRNPVS Trigger: AGAAACTGGATTTCGAATCCATCCAGACATACACAG...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR TCA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACAAGTTTTCTGGGATCTaGTTGATAAGTGTCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNKFSGI*LISVDI Trigger: TATGTCGACACTTATCAATCAGATCCCAGAAAACTT...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGAGACGATGGCAACCTaGGATCCAACGGGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFETMAT*DPTGLS Trigger: GGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCCCTGGCAGAGACGATaGCAACCTGGGATCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFPWQRR*QPGIQR Trigger: CCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGGG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | TCTGGTCTCCCGGTCCAGGGCCGTGCTTATCACCAGAGTGTAAAAGTTCTCAACTTTACTGTGTATGTCTaGATGGATTCGAAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLPVQGRAYHQSVKVLNFTVYV*MDSKSS Trigger: ACTGGATTTCGAATCCATCCAGACATACACAGTAAA...GTTGAGAACTTTTACACTCTGGTGATAAGCACGGCCCTGGACCGGGAGACCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCGTTTCCTCGGCCACTaGATAGTGCCTAGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFRFLGH*IVPRLA Trigger: TGCCAGCCTAGGCACTATTCAGTGGCCGAGGAAACG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTGTTGTATTCGGATCTaGTCTCCCGGTCCAGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFCCIRI*SPGPGP Trigger: CGGCCCTGGACCGGGAGACCAGATCCGAATACAACA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTCGCTGATACTGGGATaGGTGGACAATCCTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFSLILG*VDNPRA Trigger: GGCCCTAGGATTGTCCACTCATCCCAGTATCAGCGA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCTCCCCGTATCTCGCTaGTACTGGGATGAGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLPVSR*YWDEWT Trigger: TGTCCACTCATCCCAGTATCAGCGAGATACGGGGAG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGGCTGGCAACTAGCCTaGGCTATGCCCAGCAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFGWQLA*AMPSKT Trigger: TGTTTTGCTGGGCATAGCTCAGGCTAGTTGCCAGCC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGTCTCTCACCAAACGTaGTCCAGCTCTGGCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFVSHQT*SSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGAC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCCCGGTCCAGGGCCGTaGTTATCACCAGAGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFPGPGP*LSPECK Trigger: TTTACACTCTGGTGATAAGCACGGCCCTGGACCGGG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLSGLH*FLVSHQ Trigger: TTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFNVLQL*LTLSLT Trigger: AGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGCCTCCATTGCTTTCTaGTCTCTCACCAAACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFASIAF*SLTKRA Trigger: AGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTATCCGTAGCTCCGCCTaGAAAAACTGCAAGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFIRSSA*KNCKGF Trigger: AAATCCCTTGCAGTTTTTTCAGGCGGAGCTACGGAT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAACAAATCCCCGGTCTaGCTATCGAACTGCAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFNKSPV*LSNCKC Trigger: GCATTTGCAGTTCGATAGGCAGACCGGGGATTTGTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCTCATAGAGCAGCTTTaGAAACTCTGGGACGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLIEQL*KLWDVV Trigger: GACAACGTCCCAGAGTTTGCAAAGCTGCTCTATGAG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGAAGATCATCTTGGATaGAGCACACCATCCTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFEDHLG*STPSFR Trigger: ACGGAAGGATGGTGTGCTCCATCCAAGATGATCTTC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAAGAATATCAGGACTTaGCTTTGTTTCGGAACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFKNIRT*LCFGTR Trigger: GCGCGTTCCGAAACAAAGGCAAGTCCTGATATTCTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAGGAAAACTGGGGAATaGTCATTTACGTCCCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFRKTGE*SFTSLI Trigger: GATTAGGGACGTAAATGATCATTCCCCAGTTTTCCT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGGTCTTTTAACAAATTaGCCACAAAGGAGCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFGLLTN*PQRSHS Trigger: AGAGTGGCTCCTTTGTGGCCAATTTGTTAAAAGACC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCCTACATCCAAGTCCTaGGCACGTTCTATTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFPTSKS*ARSIKK Trigger: TTTCTTAATAGAACGTGCCCAGGACTTGGATGTAGG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAAAGGAAGATCATCTTaGATGGAGCACACCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFKGRSS*MEHTIL Trigger: AAGGATGGTGTGCTCCATCCAAGATGATCTTCCTTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| 3UTR CAA 72 bp | AATCCAGTTTCTGTCTTAAAAGCAGTTCTCCCGATTTaGCACTTAATCGAAACGTTTTGCGAATGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPVSVLKAVLPI*HLIETFCECLQ Trigger: CTGAAGACATTCGCAAAACGTTTCGATTAAGTGCAAAATCGGGAGAACTGCTTTTAAGACAGAAACTGGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAGTGGAAATTGGGACTaGTTGTGTAATTTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFSGNWD*LCNFGD Trigger: GTCTCCAAAATTACACAATCAGTCCCAATTTCCACT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAGGCTTGTTTCTAAGTaGATCCTAAATGCTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFRLVSK*ILNAPE Trigger: TTCTGGAGCATTTAGGATTCACTTAGAAACAAGCCT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGCTGTGGTAATATTATaGCATCGAGACTGTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFAVVIL*HRDCLV Trigger: TACAAGACAGTCTCGATGGCATAATATTACCACAGC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGCGAATGTCTTCAGATaGTTGGGAAAATGCATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFANVFR*LGKCIR Trigger: TCTTATGCATTTTCCCAAGCATCTGAAGACATTCGC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCTGTGTATGTCTGGATaGATTCGAAATCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLCMSG*IRNPVS Trigger: AGAAACTGGATTTCGAATCCATCCAGACATACACAG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGTCCTGCAAGTTTTCTaGGATCTGATTGATAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFVLQVF*DLIDKC Trigger: ACACTTATCAATCAGATCCCAGAAAACTTGCAGGAC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR TCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAAGTTTTCTGGGATCTaGTTGATAAGTGTCGACATA | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFKFSGI*LISVDI Trigger: TATGTCGACACTTATCAATCAGATCCCAGAAAACTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTTTACTGTGTATGTCTaGATGGATTCGAAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFFTVYV*MDSKSS Trigger: ACTGGATTTCGAATCCATCCAGACATACACAGTAAA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR GCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTTAATCGAAACGTTTTaGGAATGTCTTCAGATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLIETF*ECLQML Trigger: AAGCATCTGAAGACATTCGCAAAACGTTTCGATTAA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CCA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTTTCAAATCCATCACTTaGACAAATACCACACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFFKSIT*TNTTQV Trigger: AACTTGTGTGGTATTTGTCCAAGTGATGGATTTGAA...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCCACACCATCCTTCCGTaGTCTCCGGAGTCAGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAHTILP*SPESGS Trigger: AGATCCTGACTCCGGAGACAACGGAAGGATGGTGTG...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CAA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCAGCTCTGGCTCACGTaGTCGCTAACTCTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRQLWLT*SLTLSP Trigger: GGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTG...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CAA 90 bp | TCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCACAGCTCTGGCTCACGTaGTCGCTAACTCTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: STTSIRTRAVPDLGGLPPQLWLT*SLTLSP Trigger: GGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTG...TGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CAA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCCAGCTCTGGCTCACGTaGTCGCTAACTCTATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIQLWLT*SLTLSP Trigger: GGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTG...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CAA 90 bp | GTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCCCATCGAGACTGTCTTaGTTTCGGAACGCGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHNFNPYQGRAGPGWTPAPSRLS*FRNALL Trigger: AAGGAGCGCGTTCCGAAACAAAGACAGTCTCGATGG...GGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625033.1 |
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| CDS CCA 90 bp | TGTTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTGCTTTCTaGTCTCTCACCAAACGTGCTCCAGCTCTGGCTCACGTTGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: CFGTRSFPSPASIAF*SLTKRAPALAHVVA Trigger: AGCGACAACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS GCA 90 bp | TTGCCTTTGTTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: LPLFRNALLPLSGLH*FLVSHQTCSSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAACAAAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS GCA 90 bp | CGTTCTTTGTTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: RSLFRNALLPLSGLH*FLVSHQTCSSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAACAAAGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS GCA 90 bp | CTGTCTTTGTTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: LSLFRNALLPLSGLH*FLVSHQTCSSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAACAAAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625033.1 |
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| CDS-3UTR CAA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCGGAGTGATACTTTCTTaGTTTCGGAACGCGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIGVILS*FRNALL Trigger: AAGGAGCGCGTTCCGAAACAAAGAAAGTATCACTCC...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624874.1 |
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| CDS TCA 90 bp | ACGTTGTCGCTAACTCTATCTCCCCGTATCTCGCTGATACTGGGATaGGTGGACAATCCTAGGGCCCGGATTTCCCGGAGCGACCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TLSLTLSPRISLILG*VDNPRARISRSDRL Trigger: AAGGCGGTCGCTCCGGGAAATCCGGGCCCTAGGATTGTCCACTCATCCCAGTATCAGCGAGATACGGGGAGATAGAGTTAGCGACAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS GCA 90 bp | CTTTCTTTGTTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: LSLFRNALLPLSGLH*FLVSHQTCSSSGSR Trigger: ACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAACAAAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624874.1 |
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| CDS-3UTR CAA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCAAAAGGAAGATCATCTaGGATGGAGCACACCATCCT | + |
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Preference number: 5 (lower is better) Translates to: HNFNPYQGRAGPGWTPAIKRKII*DGAHHP Trigger: AGGATGGTGTGCTCCATCCAAGATGATCTTCCTTTT...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGAGACGATGGCAACCTGGGATCCAACGGGGCTGTCCTCCGGGATCTGGCAGTTCTCCCGATTTaGCACTTAATCGAAACGTTT | + |
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Preference number: 5 (lower is better) Translates to: PGRDDGNLGSNGAVLRDLAVLPI*HLIETF Trigger: AAACGTTTCGATTAAGTGCAAAATCGGGAGAACTGC...CAGATCCCGGAGGACAGCCCCGTTGGATCCCAGGTTGCCATCGTCTCTGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CAA 90 bp | TGTCCACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCGTTAGTTCCGGAGGATaGTCATTCAAATCCATCACT | + |
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Preference number: 5 (lower is better) Translates to: CPQLQSVPGPCRTWVDSRVSSGG*SFKSIT Trigger: AGTGATGGATTTGAATGACAATCCTCCGGAACTAAC...GCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS CCA 90 bp | CGGCCTCCATTGCTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACTCTATCTCCCCGTATCTCGCTGATA | + |
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Preference number: 5 (lower is better) Translates to: RPPLLSGLSPNVLQL*LTLSLTLSPRISLI Trigger: TATCAGCGAGATACGGGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS-3UTR CAA 90 bp | CACAACTTCAATCCGTACCAGGGCCGTGCCGGACCTGGGTGGACTCCCGCCATCCTTAATCGAAACGTTTaGCGAATGTCTTCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: HNFNPYQGRAGPGWTPAILNRNV*RMSSDA Trigger: AGCATCTGAAGACATTCGCAAAACGTTTCGATTAAG...GATGGCGGGAGTCCACCCAGGTCCGGCACGGCCCTGGTACGGATTGAAGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCCTCTCCGGCCTCCATaGCTTTCTGGTCTCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFPLRPP*LSGLSP Trigger: TGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCAGCTCTGGCTCACGTaGTCGCTAACTCTATCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFQLWLT*SLTLSP Trigger: GGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCACACCATCCTTCCGTaGTCTCCGGAGTCAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFHTILP*SPESGS Trigger: AGATCCTGACTCCGGAGACAACGGAAGGATGGTGTG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | AAATCCAGTTTCTGTCTTAAAAGCAGTTCTCCCGATTTTGCACTTAATCGAAACTCCTGGGCACGTTCTTaGTTTCGGAACGCGCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: KSSFCLKSSSPDFALNRNSWARS*FRNALL Trigger: AAGGAGCGCGTTCCGAAACAAAGAACGTGCCCAGGA...GTTTCGATTAAGTGCAAAATCGGGAGAACTGCTTTTAAGACAGAAACTGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAAAGAATATCAGGACTaGCCTTTGTTTCGGAACGCG | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFKEYQD*PLFRNA Trigger: CGCGTTCCGAAACAAAGGCAAGTCCTGATATTCTTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAGGTCTTTTAACAAATaGGCCACAAAGGAGCCACTC | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFRSFNK*ATKEPL Trigger: GAGTGGCTCCTTTGTGGCCAATTTGTTAAAAGACCT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTAAAAGGAAGATCATCTaGGATGGAGCACACCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFKRKII*DGAHHP Trigger: AGGATGGTGTGCTCCATCCAAGATGATCTTCCTTTT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGCAGTTCTCCCGATTTaGCACTTAATCGAAACGTTT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFAVLPI*HLIETF Trigger: AAACGTTTCGATTAAGTGCAAAATCGGGAGAACTGC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTGTTAGTTCCGGAGGATaGTCATTCAAATCCATCACT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFVSSGG*SFKSIT Trigger: AGTGATGGATTTGAATGACAATCCTCCGGAACTAAC...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTCTTAATCGAAACGTTTaGCGAATGTCTTCAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFLNRNV*RMSSDA Trigger: AGCATCTGAAGACATTCGCAAAACGTTTCGATTAAG...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | CTATGTTTGAGGGTTCTAAAGGTAAAGGACAAAGACATGTACTCCCTCAAATTTATTCAAATCCATCACTaGGACAAATACCACACAAGT | + |
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Preference number: 5 (lower is better) Translates to: LCLRVLKVKDKDMYSLKFIQIHH*DKYHTS Trigger: ACTTGTGTGGTATTTGTCCAAGTGATGGATTTGAAT...AAATTTGAGGGAGTACATGTCTTTGTCCTTTACCTTTAGAACCCTCAAACATAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000194155.7 |
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| CDS-3UTR CAA 90 bp | AAATCCAGTTTCTGTCTTAAAAGCAGTTCTCCCGATTTTGCACTTAATCGAAACATTCAAATCCATCACTaGGACAAATACCACACAAGT | + |
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Preference number: 5 (lower is better) Translates to: KSSFCLKSSSPDFALNRNIQIHH*DKYHTS Trigger: ACTTGTGTGGTATTTGTCCAAGTGATGGATTTGAAT...GTTTCGATTAAGTGCAAAATCGGGAGAACTGCTTTTAAGACAGAAACTGGATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622947.1 |
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| CDS GCA 72 bp | TTTCGGAACGCGCTCCTTCCCCTCTCCGGCCTCCATTaGTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FRNALLPLSGLH*FLVSHQTCSSS Trigger: AGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAATGGAGGCCGGAGAGGGGAAGGAGCGCGTTCCGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS TCA 72 bp | CTAACTCTATCTCCCCGTATCTCGCTGATACTGGGATaGGTGGACAATCCTAGGGCCCGGATTTCCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LTLSPRISLILG*VDNPRARISRS Trigger: GCTCCGGGAAATCCGGGCCCTAGGATTGTCCACTCATCCCAGTATCAGCGAGATACGGGGAGATAGAGTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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| CDS GCA 72 bp | CCAGGGCTCTGTTCAGCACCAGCTGTGGTAATATTATaGCATCGAGACTGTCTTTGTTTCGGAACGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGLCSAPAVVIL*HRDCLCFGTRS Trigger: GGAGCGCGTTCCGAAACAAAGACAGTCTCGATGGCATAATATTACCACAGCTGGTGCTGAACAGAGCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625033.1 |
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| CDS CCA 72 bp | TTGCTTTCTGGTCTCTCACCAAACGTGCTCCAGCTCTaGCTCACGTTGTCGCTAACTCTATCTCCCCGTATC | + |
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Preference number: 6 (lower is better) Translates to: LLSGLSPNVLQL*LTLSLTLSPRI Trigger: GATACGGGGAGATAGAGTTAGCGACAACGTGAGCCAGAGCTGGAGCACGTTTGGTGAGAGACCAGAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194155.7 ENST00000622947.1 ENST00000624874.1 ENST00000625033.1 |
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