Pregenerated sensors for PCDHB15 (Homo sapiens)
Ensembl gene IDs: ENSG00000113248Ensembl transcript IDs: ENST00000231173.6, ENST00000623671.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAGAGGAAATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTaGCCTTATACGAACACCTTAAACACAGTAAATCTGGGTATTAGA | + |
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Preference number: 1 (lower is better) Translates to: KEEIAGDALLGPSVY*PYTNTLNTVNLGIR Trigger: TCTAATACCCAGATTTACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR TCA 90 bp | GCCTTTCCACTGATTGAAATAGACCCACCCAGATTATCTAGGAGAGTCTCCCTAAAGATTTTCCTGCTGTaGAAAGAGGAAATTGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: AFPLIEIDPPRLSRRVSLKIFLL*KEEIAG Trigger: TCCTGCAATTTCCTCTTTTCACAGCAGGAAAATCTT...TAGGGAGACTCTCCTAGATAATCTGGGTGGGTCTATTTCAATCAGTGGAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CCA 90 bp | GAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATACTGTACCATGGTCCTAGTGTCTATTaGCCTTATACGAACACCTTA | + |
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Preference number: 2 (lower is better) Translates to: ESEQCCHPKQVDVGILYHGPSVY*PYTNTL Trigger: TAAGGTGTTCGTATAAGGCCAATAGACACTAGGACC...ATGGTACAGTATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR CAA 90 bp | AGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAAAAGAGGAAATaGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTGGCCTTATA | + |
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Preference number: 2 (lower is better) Translates to: RIWNSLRFSCCEKRK*QEMHYLVLVSIGLI Trigger: TATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCTCTTTTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGAAGTTGAGAAGCTCCTaGAGACAGAAAAGTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: CVVINLLQGSDLLSFETWKLRSS*RQKSPD Trigger: GTCAGGACTTTTCTGTCTCCAGGAGCTTCTCAACTT...CCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTACTACACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR GCA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACTGGCGGTCATTATTTTaGATGCAATACCATTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: VINLLQGSDLLSFETWLDWRSLF*MQYHSR Trigger: TCTAGAATGGTATTGCATGCAAAATAATGACCGCCA...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CCA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACAAAACAAGTAGATGTTaGCATACTGTACCATCAGAA | + |
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Preference number: 2 (lower is better) Translates to: VINLLQGSDLLSFETWLDKTSRC*HTVPSE Trigger: TTCTGATGGTACAGTATGCCAACATCTACTTGTTTT...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGTCTAAGCCCAGAATTTaGAACTCGTTAAGATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CVVINLLQGSDLLSFETWSKPRI*NSLRFS Trigger: GGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGA...CCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTACTACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR CCA 72 bp | TGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTaGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: CKEVTYSVLKRG*TSPKSVQQAVR Trigger: CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR GCA 72 bp | GGGATTAGGGCAGGAACATCTTGGCGGTCATTATTTTaGATGCAATACCATTCTAGAGTATCTGCAAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: GIRAGTSWRSLF*MQYHSRVSAKL Trigger: CAACTTTGCAGATACTCTAGAATGGTATTGCATGCAAAATAATGACCGCCAAGATGTTCCTGCCCTAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR CCA 72 bp | TACTGTACCATCAGAAGCTCCTCTAAGCCCAGAATTTaGAACTCGTTAAGATTTTCCTGCTGTGAAAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: YCTIRSSSKPRI*NSLRFSCCEKR Trigger: CCTCTTTTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCTGATGGTACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR CCA 72 bp | ATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTaGCATACTGTACCATCAGAAGCTCCTCTAAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: IRTMLPSKTSRC*HTVPSEAPLSP Trigger: TGGGCTTAGAGGAGCTTCTGATGGTACAGTATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CAA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACAGAGTATCTGCAAAGTaGAGAAGCTCCTGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: VINLLQGSDLLSFETWLDRVSAK*RSSWRQ Trigger: CTGTCTCCAGGAGCTTCTCAACTTTGCAGATACTCT...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR TCA 72 bp | TTTGCATGCAATACCATTCTAGAGTATCTGCAAAGTTaGGAAGCTCCTGGAGACAGAAAAGTCCTGACAAGA | + |
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Preference number: 3 (lower is better) Translates to: FACNTILEYLQS*EAPGDRKVLTR Trigger: TCTTGTCAGGACTTTTCTGTCTCCAGGAGCTTCTCAACTTTGCAGATACTCTAGAATGGTATTGCATGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR CCA 72 bp | ATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTaGCCTTATACGAACACCTTAAACACAGTAAATCTG | + |
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Preference number: 3 (lower is better) Translates to: IAGDALLGPSVY*PYTNTLNTVNL Trigger: CAGATTTACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| 3UTR-3UTR CAA 90 bp | TTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACACCTTAAACACAGTAAATTTACACCCCAAACTTTaGTCAAAAAGTCAAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LLGPSVYWPYTNTLNTVNLHPKL*SKSQAV Trigger: CACAGCTTGACTTTTTGACAAAAGTTTGGGGTGTAA...ATTTACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | TCAGTTTTGAAACGTGGCTGGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGGGGAGACACTGGTCCGTaGTCTGCTAACAGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVLKRGWTSPKSVQQAVRGDTGP*SANRLS Trigger: GGAAAGCCTGTTAGCAGAGCACGGACCAGTGTCTCC...CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAACTGTCAAGGTTAATCTaGGCTCGGCCTGCTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RSSSKPRIWNSLRFSCCELSRLI*ARPAPR Trigger: GCGAGGAGCAGGCCGAGCTCAGATTAACCTTGACAG...TTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAACGTCCAAGACCAAGATaGGGATCTGGACGGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSSSKPRIWNSLRFSCCERPRPR*GSGRCQ Trigger: CTGGCACCGTCCAGATCCTCATCTTGGTCTTGGACG...TTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | TGTGTAGTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGGGTGCCAGATCGGGGTaGAGAGCCACCGTCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: CVVINLLQGSDLLSFETWGARSG*RATVHR Trigger: GCGGTGGACGGTGGCTCTCCACCCCGATCTGGCACC...CCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTACTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACGCTCTGGGTATTTCCTaGCATCCCCTCGGGTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: VINLLQGSDLLSFETWLDALGIS*HPLGCE Trigger: CTCGCACCCGAGGGGATGGCAGGAAATACCCAGAGC...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTGAAACGTGGCTGGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGGCCCCTCGGGTGCGAGTaGAAACATGGAAATGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SVLKRGWTSPKSVQQAVRPLGCE*KHGNEN Trigger: ATTCTCATTTCCATGTTTCCACTCGCACCCGAGGGG...CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | AGGAAATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACCAAGATGAGGATCTaGACGGTGCCAGATCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RKLQEMHYLVLVSIGLIRTKMRI*TVPDRG Trigger: ACCCCGATCTGGCACCGTCCAGATCCTCATCTTGGT...TCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | GCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACACCTTAAACACAGTAGGGAAAGCGCTCCCCTaGAGGCTCCATCTTTACTTC | + |
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Preference number: 4 (lower is better) Translates to: ALLGPSVYWPYTNTLNTVGKALP*RLHLYF Trigger: GAAGTAAAGATGGAGCCTGCAGGGGAGCGCTTTCCC...TACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | AGGAAATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGATACTTCAGGGAGCGATaGGACAGAGGCAGTGATCGA | + |
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Preference number: 4 (lower is better) Translates to: RKLQEMHYLVLVSIGLIRYFRER*DRGSDR Trigger: TCGATCACTGCCTCTGTCCCATCGCTCCCTGAAGTA...TCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACCCAGCCCTAGGTCATTaGCCAGGTTGGCTACAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VINLLQGSDLLSFETWLDPALGH*PGWLQK Trigger: CTTTTGTAGCCAACCTGGCCAATGACCTAGGGCTGG...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | TCAGTTTTGAAACGTGGCTGGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGGGTAATAAAGGGAGTATaGTATCTCTCCATTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVLKRGWTSPKSVQQAVRVIKGV*YLSICP Trigger: GGGACAAATGGAGAGATATCATACTCCCTTTATTAC...CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | TTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACACCTTAAACACAGTAAATTGCCATCCCCTCGGGTaGGAGTGGAAACATGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: LLGPSVYWPYTNTLNTVNCHPLG*EWKHGN Trigger: ATTTCCATGTTTCCACTCGCACCCGAGGGGATGGCA...ATTTACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAAATCTGAGCTCGGCCTaGTCCTCGCGATCCAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGINLSSA*SSRSSS Trigger: AGAACTGGATCGCGAGGAGCAGGCCGAGCTCAGATT...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAAGGAAACTCAGGAGAATaGTCGTTTATGTCTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: RSSSKPRIWNSLRFSCCEGNSGE*SFMSVT Trigger: AGTGACAGACATAAACGATCATTCTCCTGAGTTTCC...TTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | TGTGTAGTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGATCAACTGCCCGGTCTaGAGATCAAGCTGCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: CVVINLLQGSDLLSFETWINCPV*RSSCKP Trigger: AGGCTTGCAGCTTGATCTGCAGACCGGGCAGTTGAT...CCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTACTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | AGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAAAAGGGAGCTAGTTTCTaGGATTTTCAGGGTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: RSSSKPRIWNSLRFSCCEKGASF*DFQGHF Trigger: GAAATGACCCTGAAAATCCCAGAAACTAGCTCCCTT...TTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | GGGCAGGAACATCTTGGCGGTCATTATTTTGCATGCAATACCATTCTAGAGTATGGTCCTAGTGTCTATTaGCCTTATACGAACACCTTA | + |
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Preference number: 4 (lower is better) Translates to: GQEHLGGHYFACNTILEYGPSVY*PYTNTL Trigger: TAAGGTGTTCGTATAAGGCCAATAGACACTAGGACC...ATACTCTAGAATGGTATTGCATGCAAAATAATGACCGCCAAGATGTTCCTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | GCCTTTCCACTGATTGAAATAGACCCACCCAGATTATCTAGGAGAGTCTCCCTATCTAAGCCCAGAATTTaGAACTCGTTAAGATTTTCC | + |
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Preference number: 4 (lower is better) Translates to: AFPLIEIDPPRLSRRVSLSKPRI*NSLRFS Trigger: GGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGA...TAGGGAGACTCTCCTAGATAATCTGGGTGGGTCTATTTCAATCAGTGGAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAATGGGACAGAGGCAGTaGTCGATCTGTGCGTTGATA | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIMGQRQ*SICALI Trigger: TATCAACGCACAGATCGATCACTGCCTCTGTCCCAT...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | AGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTTTCCTGCTGTGAAAAGATTTTCCTGCTGTaGAAAGAGGAAATTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RSSSKPRIWNSLRFSCCEKIFLL*KEEIAG Trigger: TCCTGCAATTTCCTCTTTTCACAGCAGGAAAATCTT...TTCACAGCAGGAAAATCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTGAAACGTGGCTGGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGGCTGGCTTACAATATTTaGGAATATAGGCTTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SVLKRGWTSPKSVQQAVRLAYNI*EYRLQE Trigger: TTCTTGAAGCCTATATTCCCAAATATTGTAAGCCAG...CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTGAAACGTGGCTGGACAAGTCCAAAATCTGTACAGCAGGCAGTTAGGAAAACAAGTAGATGTTaGCATACTGTACCATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SVLKRGWTSPKSVQQAVRKTSRC*HTVPSE Trigger: TTCTGATGGTACAGTATGCCAACATCTACTTGTTTT...CCTAACTGCCTGCTGTACAGATTTTGGACTTGTCCAGCCACGTTTCAAAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | AGGAAATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGAGTTTTGAAACGTGGCTaGACAAGTCCAAAATCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RKLQEMHYLVLVSIGLIRVLKRG*TSPKSV Trigger: TACAGATTTTGGACTTGTCCAGCCACGTTTCAAAAC...TCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR TCA 90 bp | TGTGTAGTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGGAGTATCTGCAAAGTTaGGAAGCTCCTGGAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: CVVINLLQGSDLLSFETWEYLQS*EAPGDR Trigger: TCTGTCTCCAGGAGCTTCTCAACTTTGCAGATACTC...CCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTACTACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAGCAGTGATCGATCTGTaGGTTGATAACCTGTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIAVIDL*VDNLFG Trigger: TCCGAACAGGTTATCAACGCACAGATCGATCACTGC...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | GTAATCAATTTATTGCAAGGAAGTGACTTACTCAGTTTTGAAACGTGGCTGGACTCATTTAATATCAACTaGCCGGTCTGCAGATCAAGC | + |
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Preference number: 4 (lower is better) Translates to: VINLLQGSDLLSFETWLDSFNIN*PVCRSS Trigger: GCTTGATCTGCAGACCGGGCAGTTGATATTAAATGA...GTCCAGCCACGTTTCAAAACTGAGTAAGTCACTTCCTTGCAATAAATTGATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAGGTCATTGGCCAGGTTaGCTACAAAAGAACCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIGHWPG*LQKNLS Trigger: AGAGAGGTTCTTTTGTAGCCAACCTGGCCAATGACC...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAAAGTTGAGAAGCTCCTaGAGACAGAAAAGTCCTGAC | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIKLRSS*RQKSPD Trigger: GTCAGGACTTTTCTGTCTCCAGGAGCTTCTCAACTT...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATATTTCTCCTGAAAGGCTaGTTAGCTCAAAAGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIFLLKG*LAQKVC Trigger: ACAAACCTTTTGAGCTAAGCAGCCTTTCAGGAGAAA...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR GCA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATATGGCGGTCATTATTTTaGATGCAATACCATTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: IPYESEQCCHPKQVDVGIWRSLF*MQYHSR Trigger: TCTAGAATGGTATTGCATGCAAAATAATGACCGCCA...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS GCA 90 bp | CAGCACCAGCTCTGGGTATTTCCTTTGTTCGGGAAAGCGCTCCCCTaGAGGCTCCATCTTTACTTCTGTACACGCCCCTTTCAAGGAACC | + |
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Preference number: 5 (lower is better) Translates to: QHQLWVFPLFGKALP*RLHLYFCTRPFQGT Trigger: GGTTCCTTGAAAGGGGCGTGTACAGAAGTAAAGATGGAGCCTGCAGGGGAGCGCTTTCCCGAACAAAGGAAATACCCAGAGCTGGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623671.1 |
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| CDS GCA 90 bp | CAGCCTGCCAGAGTCACTTCCAGTAAAAGAAGGAGAATCAGGACTTaGCTTTGTTCGGGAAAGCGCTCCCCTGCAGGCTCCATCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: QPARVTSSKRRRIRT*LCSGKRSPAGSIFT Trigger: AGTAAAGATGGAGCCTGCAGGGGAGCGCTTTCCCGAACAAAGGCAAGTCCTGATTCTCCTTCTTTTACTGGAAGTGACTCTGGCAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCCTTTCCACTGATTGAAATAGACCCACCCAGATTATCTAGGAGAGTCTCCCTACCCAGCCCTAGGTCATaGGCCAGGTTGGCTACAAAA | + |
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Preference number: 5 (lower is better) Translates to: AFPLIEIDPPRLSRRVSLPSPRS*ARLATK Trigger: TTTTGTAGCCAACCTGGCCAATGACCTAGGGCTGGG...TAGGGAGACTCTCCTAGATAATCTGGGTGGGTCTATTTCAATCAGTGGAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | AGGAAATTGCAGGAGATGCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGATCCCTAGCAGAGACCTaGACAACTAGGGAGCCTACT | + |
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Preference number: 5 (lower is better) Translates to: RKLQEMHYLVLVSIGLIRSLAET*TTREPT Trigger: AGTAGGCTCCCTAGTTGTCAAGGTCTCTGCTAGGGA...TCGTATAAGGCCAATAGACACTAGGACCAAGTAATGCATCTCCTGCAATTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCATACTGTACCATCAGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGAAGAGTATCTGCAAAGTaGAGAAGCTCCTGGAGACAG | + |
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Preference number: 5 (lower is better) Translates to: AYCTIRSSSKPRIWNSLRRVSAK*RSSWRQ Trigger: CTGTCTCCAGGAGCTTCTCAACTTTGCAGATACTCT...TCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCTGATGGTACAGTATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACACCTTAAACACAGTAAAGGAGAATCAGGACTaGCCTTTGTTCGGGAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: ALLGPSVYWPYTNTLNTVKENQD*PLFGKA Trigger: CGCTTTCCCGAACAAAGGCAAGTCCTGATTCTCCTT...TACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCATTACTTGGTCCTAGTGTCTATTGGCCTTATACGAACACCTTAAACACAGTAAGGTCATTGGCCAGGTaGGCTACAAAAGAACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALLGPSVYWPYTNTLNTVRSLAR*ATKEPL Trigger: GAGAGGTTCTTTTGTAGCCAACCTGGCCAATGACCT...TACTGTGTTTAAGGTGTTCGTATAAGGCCAATAGACACTAGGACCAAGTAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCATACTGTACCATCAGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGAGTGACTTACTCAGTTTaGAAACGTGGCTGGACAAGT | + |
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Preference number: 5 (lower is better) Translates to: AYCTIRSSSKPRIWNSLRVTYSV*KRGWTS Trigger: ACTTGTCCAGCCACGTTTCAAAACTGAGTAAGTCAC...TCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCTGATGGTACAGTATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GCATACTGTACCATCAGAAGCTCCTCTAAGCCCAGAATTTGGAACTCGTTAAGATTACACCCCAAACTTTaGTCAAAAAGTCAAGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: AYCTIRSSSKPRIWNSLRLHPKL*SKSQAV Trigger: CACAGCTTGACTTTTTGACAAAAGTTTGGGGTGTAA...TCTTAACGAGTTCCAAATTCTGGGCTTAGAGGAGCTTCTGATGGTACAGTATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | GAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATACTGTACCATCAGGAGATGCATTACTaGGTCCTAGTGTCTATTGGC | + |
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Preference number: 5 (lower is better) Translates to: ESEQCCHPKQVDVGILYHQEMHY*VLVSIG Trigger: GCCAATAGACACTAGGACCAAGTAATGCATCTCCTG...ATGGTACAGTATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS-3UTR CAA 90 bp | ATTCCTTATGAATCAGAACAATGTTGCCATCCAAAACAAGTAGATGTTGGCATAATCAAGCTGCAAGCCTaGTTCGTTATCCTCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: IPYESEQCCHPKQVDVGIIKLQA*FVILRN Trigger: GTTTCTGAGGATAACGAACAAGGCTTGCAGCTTGAT...TATGCCAACATCTACTTGTTTTGGATGGCAACATTGTTCTGATTCATAAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000231173.6 |
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| CDS GCA 72 bp | CTCTGGGTATTTCCTTTGTTCGGGAAAGCGCTCCCCTaGAGGCTCCATCTTTACTTCTGTACACGCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LWVFPLFGKALP*RLHLYFCTRPF Trigger: AAAGGGGCGTGTACAGAAGTAAAGATGGAGCCTGCAGGGGAGCGCTTTCCCGAACAAAGGAAATACCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623671.1 |
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| CDS TCA 72 bp | TCAGAGCTACTTCAGGGAGCGATGGGACAGAGGCAGTaGTCGATCTGTGCGTTGATAACCTGTTCGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: SELLQGAMGQRQ*SICALITCSEM Trigger: CATTTCCGAACAGGTTATCAACGCACAGATCGATCACTGCCTCTGTCCCATCGCTCCCTGAAGTAGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000231173.6 ENST00000623671.1 |
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