Pregenerated sensors for PCDHB14 (Homo sapiens)
Ensembl gene IDs: ENSG00000120327Ensembl transcript IDs: ENST00000239449.7, ENST00000624896.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGAAACTGTGAGAAAAACAAGAGCTATAATCATGCATaGAACTACAGTACAACCAAGAATCCACAAAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: RNCEKNKSYNHA*NYSTTKNPQKI Trigger: AATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTCACAGTTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | AGCCAGGCCGTAGTGGCCTGTGCTGGTGATCCAGCTACTCAGGAGGCTGAGGCAGATCATTTATGTCTTTaGCACACAGCTCAAACCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQAVVACAGDPATQEAEADHLCL*HTAQTE Trigger: TTCGGTTTGAGCTGTGTGTCAAAGACATAAATGATC...TGCCTCAGCCTCCTGAGTAGCTGGATCACCAGCACAGGCCACTACGGCCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCGGCGGCAGTGAGCCATaGTGGTGCCACTGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSTTKNPQKIMQKVPSACGGSEP*WCHCIP Trigger: TGGAATGCAGTGGCACCATCATGGCTCACTGCCGCC...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCAAAGTCAAGGCGGCAGTaGGCCATGATGGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EKNKSYNHACNYSTTKNPKSRRQ*AMMVPL Trigger: CAGTGGCACCATCATGGCTCACTGCCGCCTTGACTT...TGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | TACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCAAGAGGCAGGAGAATCACCTaGACCCAGGAAGTCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YNQESTKDYAKSTISLPRGRRIT*TQEVKA Trigger: CGCCTTGACTTCCTGGGTTCAGGTGATTCTCCTGCC...TCTTGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCAAGACCGAAGCAGGAGGATTaGCTGAGCCCAGGATGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YNQESTKDYAKSTISLPRPKQED*LSPGCR Trigger: TCGACATCCTGGGCTCAGGCAATCCTCCTGCTTCGG...TCTTGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR CCA 90 bp | AGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAGTTCGAGACTAGCCTaGGCCACATGGCAAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKTRAIIMHATTVQPRIHSSRLA*ATWQNS Trigger: GGAGTTTTGCCATGTGGCCCAGGCTAGTCTCGAACT...GTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | GAGCAATTTCAAAATGTATATGTACACCAGCCCTATATCCATACTACATTCCAGAGCAGGTGGATCACTTaGGTTCAGGAGTTCGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: EQFQNVYVHQPYIHTTFQSRWIT*VQEFET Trigger: AGTCTCGAACTCCTGAACTCAAGTGATCCACCTGCT...CTGGAATGTAGTATGGATATAGGGCTGGTGTACATATACATTTTGAAATTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR GCA 90 bp | GCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCTTTTCGCAGATCGAGTaGCCCTCTGATCTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: AIIMHATTVQPRIHKRLCFSQIE*PSDLHG Trigger: ACCATGGAGATCAGAGGGGCACTCGATCTGCGAAAA...GCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR GCA 90 bp | AGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACTGCAGATTCAGTACCTaGCCGAGACAATCCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTRAIIMHATTVQPRIHCRFST*PRQSQQ Trigger: TTGCTGGGATTGTCTCGGGCAGGTACTGAATCTGCA...GTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR GCA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCTGCCACAGAATAGTGTaGAGATTCAGTACCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSTTKNPQKIMQKVPSACCHRIV*RFSTCP Trigger: CGGGCAGGTACTGAATCTGCACACTATTCTGTGGCA...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR CCA 90 bp | GAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCATTAACAGGAACCCCCTaGAGAGTGTATCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKNKSYNHACNYSTTKNPLTGTP*RVYPPA Trigger: TGCTGGAGGATACACTCTCCAGGGGGTTCCTGTTAA...TGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CCA 90 bp | TGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCTTAACAGGAACCCCCTaGAGAGTGTATCCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CMQLQYNQESTKDYAKSTLTGTP*RVYPPA Trigger: TGCTGGAGGATACACTCTCCAGGGGGTTCCTGTTAA...GGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | TTGTTACCCTTTCTAAAGAACATTTTCAGAGAGAATAGTGGGATAAACGCACTAATCCAGATCCTTAGCTaGGATGGTGGCAATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPFLKNIFRENSGINALIQILS*DGGNPG Trigger: TCCTGGATTGCCACCATCTCAGCTAAGGATCTGGAT...TAGTGCGTTTATCCCACTATTCTCTCTGAAAATGTTCTTTAGAAAGGGTAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | CATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATATCCAGATCCTTAGCTaGGATGGTGGCAATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HATTVQPRIHKRLCKKYHIQILS*DGGNPG Trigger: TCCTGGATTGCCACCATCTCAGCTAAGGATCTGGAT...ATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR GCA 90 bp | AAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTTTTTCGCAGATCGAGTaGCCCTCTGATCTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSYNHACNYSTTKNPQKIFSQIE*PSDLHG Trigger: ACCATGGAGATCAGAGGGGCACTCGATCTGCGAAAA...AATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CCA 90 bp | AGAAACTGTGAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCTGGAAGCTGAAGCTCTaGTTTTTAACAGGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNCEKNKSYNHACNYSTTWKLKL*FLTGTP Trigger: GGGGGTTCCTGTTAAAAACCAGAGCTTCAGCTTCCA...GGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTCACAGTTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | AGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACCCGACATCCAAATCTTaGGCACTCTCCATTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKTRAIIMHATTVQPRIHPTSKS*ALSIRK Trigger: CTTTCTAATGGAGAGTGCTCAAGATTTGGATGTCGG...GTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | TGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCCCGACATCCAAATCTTaGGCACTCTCCATTAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CMQLQYNQESTKDYAKSTPTSKS*ALSIRK Trigger: CTTTCTAATGGAGAGTGCTCAAGATTTGGATGTCGG...GGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCAAGGTTCTCCAGAACTaGAAATGGAGGGATAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YSTTKNPQKIMQKVPSACKVLQN*KWRDSI Trigger: GATGCTATCCCTCCATTTTCAGTTCTGGAGAACCTT...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | TACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCAAGATTCTTTGTAGGCATCTaGGAGAGGCCACAAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YNQESTKDYAKSTISLPRFFVGI*ERPQSV Trigger: AACACTTTGTGGCCTCTCTCAGATGCCTACAAAGAA...TCTTGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR CCA 90 bp | ATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACTGGAAGCTGAAGCTCTaGTTTTTAACAGGAACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHATTVQPRIHKRLCKKYWKLKL*FLTGTP Trigger: GGGGGTTCCTGTTAAAAACCAGAGCTTCAGCTTCCA...GTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CCA 90 bp | CAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCACGATATGGTCACTTCTaGTGGGTTGTCGTTTATATC | + |
|
Preference number: 4 (lower is better) Translates to: QYNQESTKDYAKSTISLPRYGHF*WVVVYI Trigger: GATATAAACGACAACCCACCAGAAGTGACCATATCG...TGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | AGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACCTCTTGTGGAAAAACTaGAGCTCAGCCGTAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKTRAIIMHATTVQPRIHLLWKN*SSAVIL Trigger: CAAAATTACGGCTGAGCTTCAGTTTTTCCACAAGAG...GTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | GCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATTCAAAATCCAGGGGTaGTCTCAAATTAACTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACNYSTTKNPQKIMQKVPFKIQG*SQINFP Trigger: GGGGAAGTTAATTTGAGATCACCCCTGGATTTTGAA...TGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCTGCTTTGTACTCATCTaGTGGAAGGCTATTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: YSTTKNPQKIMQKVPSACCFVLI*WKAILP Trigger: GGGTAAAATAGCCTTCCATCAGATGAGTACAAAGCA...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR TCA 90 bp | AAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTCTCTTGTGGAAAAACTaGAGCTCAGCCGTAATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KSYNHACNYSTTKNPQKILLWKN*SSAVIL Trigger: CAAAATTACGGCTGAGCTTCAGTTTTTCCACAAGAG...AATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | AAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTTTCAAAATCCAGGGGTaGTCTCAAATTAACTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSYNHACNYSTTKNPQKIFKIQG*SQINFP Trigger: GGGGAAGTTAATTTGAGATCACCCCTGGATTTTGAA...AATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | GAAACTGTGAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAAAGGGAGGTTATCTTaGATAGAGCAAATCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ETVRKTRAIIMHATTVQPKGRLS*IEQIIL Trigger: GAGGATGATTTGCTCTATTCAAGATAACCTCCCTTT...TGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTCACAGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR TCA 90 bp | CAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCAAAGGGAGGTTATCTTaGATAGAGCAAATCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLQYNQESTKDYAKSTISKGRLS*IEQIIL Trigger: GAGGATGATTTGCTCTATTCAAGATAACCTCCCTTT...GCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR GCA 90 bp | CTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGAATTTCTGTTTCCTCTaGCACAGAATAGTGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQYNQESTKDYAKSTISLNFCFL*HRIVCR Trigger: TCTGCACACTATTCTGTGGCAGAGGAAACAGAAATT...CAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR GCA 90 bp | TACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCAAGAAGGAATATTAGAACTTaGCTTTTTCGCAGATCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YNQESTKDYAKSTISLPRRNIRT*LFRRSS Trigger: ACTCGATCTGCGAAAAAGGCAAGTTCTAATATTCCT...TCTTGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR GCA 90 bp | TGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCAGCTATAATCATGCATaGAACTACAGTACAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CMQLQYNQESTKDYAKSTSYNHA*NYSTTK Trigger: CTTGGTTGTACTGTAGTTGCATGCATGATTATAGCT...GGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR GCA 90 bp | TCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTAGCTATAATCATGCATaGAACTACAGTACAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCMQLQYNQESTKDYAKSSYNHA*NYSTTK Trigger: CTTGGTTGTACTGTAGTTGCATGCATGATTATAGCT...ACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGAAAGTTGTCCCAGACTaGGGCGGGGATCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ATTVQPRIHKRLCKKYHQKVVPD*GGDPPS Trigger: GGATGGTGGATCCCCGCCCAAGTCTGGGACAACTTT...CTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTACCCTTTCTAAAGAACATTTTCAGAGAGAATAGTGGGATAAACGCACTAAAAGTTGTCCCAGACTaGGGCGGGGATCCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPFLKNIFRENSGINALKVVPD*GGDPPS Trigger: GGATGGTGGATCCCCGCCCAAGTCTGGGACAACTTT...TAGTGCGTTTATCCCACTATTCTCTCTGAAAATGTTCTTTAGAAAGGGTAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR CAA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCTGTAATCCTAGCACGTaGGGAGGCCAAAGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YSTTKNPQKIMQKVPSACCNPST*GGQSRW Trigger: CCACCTGCTTTGGCCTCCCAACGTGCTAGGATTACA...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS-3UTR CAA 90 bp | CAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCCAAGCTCAGCCGTAATTTaGGAAGCTGAAGCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QYNQESTKDYAKSTISLPSSAVI*EAEALV Trigger: AACCAGAGCTTCAGCTTCCAAAATTACGGCTGAGCT...TGGCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGAGCTCAGCCGTAATTTaGGAAGCTGAAGCTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATTVQPRIHKRLCKKYHQSSAVI*EAEALV Trigger: AACCAGAGCTTCAGCTTCCAAAATTACGGCTGAGCT...CTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCATCAGGGGCATTATCATaGATGTCCAACACCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EKNKSYNHACNYSTTKNPSGALS*MSNTLM Trigger: CATCAAGGTGTTGGACATCAATGATAATGCCCCTGA...TGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGTCAGGGGCATTATCATaGATGTCCAACACCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ATTVQPRIHKRLCKKYHQSGALS*MSNTLM Trigger: CATCAAGGTGTTGGACATCAATGATAATGCCCCTGA...CTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | AGAAACTGTGAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCACCAGTGTCATGAACTaGAAAATTGGGGATAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: RNCEKNKSYNHACNYSTTTSVMN*KIGDNR Trigger: CCGATTATCCCCAATTTTCAAGTTCATGACACTGGT...GGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTCACAGTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | ATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACTTGATGTCCAACACCTaGATGAGAACCAAAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MHATTVQPRIHKRLCKKYLMSNT*MRTKVV Trigger: GACAACTTTGGTTCTCATCAAGGTGTTGGACATCAA...GTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCAAGAGTGAAAAAGTTCTaGAAGGTCGGTTTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACNYSTTKNPQKIMQKVPRVKKF*KVGFRK Trigger: TTTCCTGAAACCGACCTTCAAGAACTTTTTCACTCT...TGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | GAGAAAAACAAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCAAGAGTGAAAAAGTTCTaGAAGGTCGGTTTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EKNKSYNHACNYSTTKNPRVKKF*KVGFRK Trigger: TTTCCTGAAACCGACCTTCAAGAACTTTTTCACTCT...TGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTTGTTTTTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | AAGAGCTATAATCATGCATGCAACTACAGTACAACCAAGAATCCACAAAAGATTACCAGTGTCATGAACTaGAAAATTGGGGATAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSYNHACNYSTTKNPQKITSVMN*KIGDNR Trigger: CCGATTATCCCCAATTTTCAAGTTCATGACACTGGT...AATCTTTTGTGGATTCTTGGTTGTACTGTAGTTGCATGCATGATTATAGCTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000239449.7 ENST00000624896.1 |
||
| CDS-3UTR CAA 90 bp | TACAGTACAACCAAGAATCCACAAAAGATTATGCAAAAAGTACCATCAGCTTGCTATGAAGTTCTTGCTTaGTACTCATCTGATGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSTTKNPQKIMQKVPSACYEVLA*YSSDGR Trigger: CCTTCCATCAGATGAGTACAAAGCAAGAACTTCATA...GCAAGCTGATGGTACTTTTTGCATAATCTTTTGTGGATTCTTGGTTGTACTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239449.7 |
||
| CDS GCA 72 bp | TTAATAAGTATTTCCTTGTCTTTTTCGCAGATCGAGTaGCCCTCTGATCTCCATGGTTCCTTTAGGCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LISISLSFSQIE*PSDLHGSFRQS Trigger: AGATTGCCTAAAGGAACCATGGAGATCAGAGGGGCACTCGATCTGCGAAAAAGACAAGGAAATACTTATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624896.1 |
||