Pregenerated sensors for PCDHAC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000243232Ensembl transcript IDs: ENST00000289269.7, ENST00000613766.1, ENST00000615316.1, ENST00000673410.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCCGGAGCCGTGGATGCTCTGTCGCCGCAGGTCTGGTGCCCGCCTaGTCCATAGCCACTGGCCGCGGCGGAGGCAGCCGGGCAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: RRSRGCSVAAGLVPA*SIATGRGGGSRAGP Trigger: CGGCCCTGCCCGGCTGCCTCCGCCGCGGCCAGTGGCTATGGAGCAGGCGGGCACCAGACCTGCGGCGACAGAGCATCCACGGCTCCGGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | CCGGCCCCAAGCGCCGCAGCTCAAGCCCCAGCGCGCGAGCCACGTTaGCCACGAGCGCGCCGGGTGCCTGCTCCTCTGGCACAGAGTATC | + |
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Preference number: 5 (lower is better) Translates to: PAPSAAAQAPAREPR*PRARRVPAPLAQSI Trigger: GATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTGGGGCTTGAGCTGCGGCGCTTGGGGCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CCACCCTGCGCCTGCTCCCCCACCGCTCACGCTCTAGAAAGCGCCTaGGGCCGCTCCCTCCGTAGGCCCTCCCAAGGGCTCCTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: PPCACSPTAHALESA*GRSLRRPSQGLLAP Trigger: TGGGGCCAGGAGCCCTTGGGAGGGCCTACGGAGGGAGCGGCCCCAGGCGCTTTCTAGAGCGTGAGCGGTGGGGGAGCAGGCGCAGGGTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | CTCAAGCCCCAGCGCGCGAGCCACGTTGCCCACGAGCGCGCCGGGTaGCTGCTCCTCTGGCACAGAGTATCGCAGCTGGGAGGCCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LKPQRASHVAHERAG*LLLWHRVSQLGGRR Trigger: CCTGCGGCCTCCCAGCTGCGATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTGGGGCTTGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | CCCTCCGTAGGCCCTCCCAAGGGCTCCTGGCCCCACCGTCCTCGCTaGCTCCCCATATTCCAGCTCCTCCGCTCGCCTCCGAGTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PSVGPPKGSWPHRPR*LPIFQLLRSPPSRS Trigger: TGAGCGACTCGGAGGCGAGCGGAGGAGCTGGAATATGGGGAGTCAGCGAGGACGGTGGGGCCAGGAGCCCTTGGGAGGGCCTACGGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GCAGCAGCAACAGCAGCAGGAGAGGCAGTAGCAGCAGCCAGGGCATaGGCCGCCGGAGCCGTGGATGCTCTGTCGCCGCAGGTCTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: AAATAAGEAVAAARA*AAGAVDALSPQVWC Trigger: GCACCAGACCTGCGGCGACAGAGCATCCACGGCTCCGGCGGCCCATGCCCTGGCTGCTGCTACTGCCTCTCCTGCTGCTGTTGCTGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | ACGAGCGCGCCGGGTGCCTGCTCCTCTGGCACAGAGTATCGCAGCTaGGAGGCCGCAGGGCCAGGTAGCAGCAGCAGCAACAGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TSAPGACSSGTEYRS*EAAGPGSSSSNSSR Trigger: CCTGCTGCTGTTGCTGCTGCTGCTACCTGGCCCTGCGGCCTCCCAGCTGCGATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | TCAGGTCCAGCTCCAGGTAGCGCGGACTGGGCGCACCCAGATGGTTaGTGCGCAAGCAACCCGGCCCCAAGCGCCGCAGCTCAAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: SGPAPGSADWAHPDG*CASNPAPSAAAQAP Trigger: TGGGGCTTGAGCTGCGGCGCTTGGGGCCGGGTTGCTTGCGCATCAACCATCTGGGTGCGCCCAGTCCGCGCTACCTGGAGCTGGACCTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | CAACGGCGCTCACCGCCACGGGGTTGTGCGCCAGCACTTCCAAGCTaGGCAGGCAGCGAGGCCGCTGCTCACACAGCGCCTCCCGATCAA | + |
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Preference number: 5 (lower is better) Translates to: QRRSPPRGCAPALPS*AGSEAAAHTAPPDQ Trigger: TTGATCGGGAGGCGCTGTGTGAGCAGCGGCCTCGCTGCCTGCTCAGCTTGGAAGTGCTGGCGCACAACCCCGTGGCGGTGAGCGCCGTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | AGCGAGGCCGCTGCTCACACAGCGCCTCCCGATCAATGCGCTCGTTaGCGAAGAGCGCTCCACTCGTCAGGTCCAGCTCCAGGTAGCGCG | + |
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Preference number: 5 (lower is better) Translates to: SEAAAHTAPPDQCAR*RRALHSSGPAPGSA Trigger: CGCGCTACCTGGAGCTGGACCTGACGAGTGGAGCGCTCTTCGTCAACGAGCGCATTGATCGGGAGGCGCTGTGTGAGCAGCGGCCTCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | AGCTCCTCCGCTCGCCTCCGAGTCGCTCAACCCGGCTCGGCTTCCTaGTGCTGCTGCCGCTACAGCTCCAGGGGGAGGGAAAAGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: SSSARLRVAQPGSAS*CCCRYSSRGREKET Trigger: TGTTTCCTTTTCCCTCCCCCTGGAGCTGTAGCGGCAGCAGCAGCAGGAAGCCGAGCCGGGTTGAGCGACTCGGAGGCGAGCGGAGGAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615316.1 |
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| CDS TCA 90 bp | CCTGAAGCTGGTAGTTGGGCCGCGGGAAACGCGGTGAGTTGTCGTTaGTGTCCAATATTTCCACCTCAACGGCGCTCACCGCCACGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PEAGSWAAGNAVSCR*CPIFPPQRRSPPRG Trigger: ACCCCGTGGCGGTGAGCGCCGTTGAGGTGGAAATATTGGACATCAACGACAACTCACCGCGTTTCCCGCGGCCCAACTACCAGCTTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | AGAGCTGCCTCTCCCGGTCCGACGTGTAGCTGCTCAAGGAGTACCTaGGCTCACCATTGGAGCCCTCATCCGGGTCTGAGGCATTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RAASPGPTCSCSRST*AHHWSPHPGLRHSA Trigger: AGCTGAATGCCTCAGACCCGGATGAGGGCTCCAATGGTGAGCTCAGGTACTCCTTGAGCAGCTACACGTCGGACCGGGAGAGGCAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | TCTAGGCCCTTACGCAGCACCAGCTCAAGCACTTTACTGTTCTCCTaGAGGGGCTTAAGGTCCAGCTCGAAGTGCTCGCTGGGGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SRPLRSTSSSTLLFS*RGLRSSSKCSLGLS Trigger: GCTCAGCCCCAGCGAGCACTTCGAGCTGGACCTTAAGCCCCTGCAGGAGAACAGTAAAGTGCTTGAGCTGGTGCTGCGTAAGGGCCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GTGGCCTCCAGACCCAGGCTCACTTTCCGGTTGGGGCCTGAGTCTTaGTCATTGACACTGAGAACGGCCACAATGGTGTTGGGTGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: VASRPRLTFRLGPES*SLTLRTATMVLGVA Trigger: TGCTACACCCAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTGAGCCTGGGTCTGGAGGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GGCTGTCACCGTGATGTTGTAGACAGCCACCCGCTCTCGGTCCAGTaGGCCGCTCACCACCAGTGTATAGGAGTTTCCAAAGCCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: GCHRDVVDSHPLSVQ*AAHHQCIGVSKAIQ Trigger: CTGAATGGCTTTGGAAACTCCTATACACTGGTGGTGAGCGGCCCACTGGACCGAGAGCGGGTGGCTGTCTACAACATCACGGTGACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | GGGCATGGTCATTCATGTCCACCACATATACGTTGGCAGTCACAGTaGTGCTCAGTGGTGGGCTCCCCTTGTCCTGAGCCTCCACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: GHGHSCPPHIRWQSQ*CSVVGSPCPEPPQS Trigger: TGACTGTGGAGGCTCAGGACAAGGGGAGCCCACCACTGAGCAGCACTGTGACTGCCAACGTATATGTGGTGGACATGAATGACCATGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CATGTCCACCACATATACGTTGGCAGTCACAGTGCTGCTCAGTGGTaGGCTCCCCTTGTCCTGAGCCTCCACAGTCACAAAGAACTCCCG | + |
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Preference number: 5 (lower is better) Translates to: HVHHIYVGSHSAAQW*APLVLSLHSHKELP Trigger: CGGGAGTTCTTTGTGACTGTGGAGGCTCAGGACAAGGGGAGCCCACCACTGAGCAGCACTGTGACTGCCAACGTATATGTGGTGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CTCCTGCCTCTGGTTTTTCCTCGGGTAGAGAAAGCCAAGCCAAGCTaGCACTCCTGGGCTGTCAGATGGCAGGTGACAGCGAAGGATACT | + |
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Preference number: 5 (lower is better) Translates to: LLPLVFPRVEKAKPS*HSWAVRWQVTAKDT Trigger: AGTATCCTTCGCTGTCACCTGCCATCTGACAGCCCAGGAGTGCCAGCTTGGCTTGGCTTTCTCTACCCGAGGAAAAACCAGAGGCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673410.1 |
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| CDS TCA 90 bp | CGATTCGCTTACCTGAAGCTGGTAGTTGGGCCGCGGGAAACGCGGTaGGTTGTCGTTGATGTCCAATATTTCCACCTCAACGGCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: RFAYLKLVVGPRETR*VVVDVQYFHLNGAH Trigger: GTGAGCGCCGTTGAGGTGGAAATATTGGACATCAACGACAACTCACCGCGTTTCCCGCGGCCCAACTACCAGCTTCAGGTAAGCGAATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CCAGTGTATAGGAGTTTCCAAAGCCATTCAGTCGGAAAGGCAGTGTaGCCTCCAGACCCAGGCTCACTTTCCGGTTGGGGCCTGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: PVYRSFQSHSVGKAV*PPDPGSLSGWGLSL Trigger: AAGACTCAGGCCCCAACCGGAAAGTGAGCCTGGGTCTGGAGGCCACACTGCCTTTCCGACTGAATGGCTTTGGAAACTCCTATACACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | CATGGTCATTCATGTCCACCACATATACGTTGGCAGTCACAGTGCTaGTCAGTGGTGGGCTCCCCTTGTCCTGAGCCTCCACAGTCACAA | + |
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Preference number: 5 (lower is better) Translates to: HGHSCPPHIRWQSQC*SVVGSPCPEPPQSQ Trigger: TTGTGACTGTGGAGGCTCAGGACAAGGGGAGCCCACCACTGAGCAGCACTGTGACTGCCAACGTATATGTGGTGGACATGAATGACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GAGATTCCTGCTGTCAGTCACTGCTGCTTGGGCTCCCGAAGGCCCTaGTCCTGTCTGGGCCCCTGTATTGTAAAACATGAAAGTGTCACT | + |
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Preference number: 5 (lower is better) Translates to: EIPAVSHCCLGSRRP*SCLGPCIVKHESVT Trigger: AGTGACACTTTCATGTTTTACAATACAGGGGCCCAGACAGGACCAGGGCCTTCGGGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | TGGCAGCCCTTGAATCTCCCTCTCCAGAAGGGAGTAGGTCACCTCTaGATTCTCCTTTTCATCTGGGTCTGTGGCTTGCACAGTACAGAG | + |
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Preference number: 5 (lower is better) Translates to: WQPLNLPLQKGVGHL*ILLFIWVCGLHSTE Trigger: CTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAGGAGAATGCAGAGGTGACCTACTCCCTTCTGGAGAGGGAGATTCAAGGGCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 90 bp | TTCTGCAGGGGACCTTTCCCTTACTCCACAGAAGCCTCCACAGCATaGAGTGCCATACGCAGTGTAGCGGTAGCACTTGATGATGCTCAA | + |
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Preference number: 5 (lower is better) Translates to: FCRGPFPYSTEASTA*SAIRSVAVALDDAQ Trigger: TTGAGCATCATCAAGTGCTACCGCTACACTGCGTATGGCACTGCATGCTGTGGAGGCTTCTGTGGAGTAAGGGAAAGGTCCCCTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | ATAAAGGCTGCCACTGGCACTGTTAATGGAGACATAGGAGGTGACTaGCAGCCCTTGAATCTCCCTCTCCAGAAGGGAGTAGGTCACCTC | + |
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Preference number: 5 (lower is better) Translates to: IKAATGTVNGDIGGD*QPLNLPLQKGVGHL Trigger: GAGGTGACCTACTCCCTTCTGGAGAGGGAGATTCAAGGGCTGCCAGTCACCTCCTATGTCTCCATTAACAGTGCCAGTGGCAGCCTTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | TCCTGTCTGGGCCCCTGTATTGTAAAACATGAAAGTGTCACTCCCTaGGCCTGCTGTCAGACAGGCCTTGTAGCAGTAGGTCTTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SCLGPCIVKHESVTP*ACCQTGLVAVGLGE Trigger: CTCACCAAGACCTACTGCTACAAGGCCTGTCTGACAGCAGGCTCAGGGAGTGACACTTTCATGTTTTACAATACAGGGGCCCAGACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 90 bp | ATCTCGAAGGCTGCTGACGAGTTGGTTGAGGTAGGGTACAGAATGTaGGGGGCATGGTCATTCATGTCCACCACATATACGTTGGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: ISKAADELVEVGYRM*GAWSFMSTTYTLAV Trigger: GACTGCCAACGTATATGTGGTGGACATGAATGACCATGCCCCTCACATTCTGTACCCTACCTCAACCAACTCGTCAGCAGCCTTCGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CCTCTCCAGAAGGGAGTAGGTCACCTCTGCATTCTCCTTTTCATCTaGGTCTGTGGCTTGCACAGTACAGAGCAACACACCTGGCAAATT | + |
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Preference number: 5 (lower is better) Translates to: PLQKGVGHLCILLFI*VCGLHSTEQHTWQI Trigger: AATTTGCCAGGTGTGTTGCTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAGGAGAATGCAGAGGTGACCTACTCCCTTCTGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GAAGGGAGTAGGTCACCTCTGCATTCTCCTTTTCATCTGGGTCTGTaGCTTGCACAGTACAGAGCAACACACCTGGCAAATTGTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: EGSRSPLHSPFHLGL*LAQYRATHLANCSP Trigger: AGGAGAACAATTTGCCAGGTGTGTTGCTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAGGAGAATGCAGAGGTGACCTACTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | CTTTTCATCTGGGTCTGTGGCTTGCACAGTACAGAGCAACACACCTaGCAAATTGTTCTCCTGTATGTAGATGGAATAGGAGTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LFIWVCGLHSTEQHT*QIVLLYVDGIGVLQ Trigger: CTGGAGGACTCCTATTCCATCTACATACAGGAGAACAATTTGCCAGGTGTGTTGCTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 90 bp | GTTCTCCTGTATGTAGATGGAATAGGAGTCCTCCAGGAAGCTTGGTaGATTGTCATTGATGTCAGAGATCTCAACCTTCAGTGTACGCAG | + |
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Preference number: 5 (lower is better) Translates to: VLLYVDGIGVLQEAW*IVIDVRDLNLQCTQ Trigger: CTGCGTACACTGAAGGTTGAGATCTCTGACATCAATGACAATCCACCAAGCTTCCTGGAGGACTCCTATTCCATCTACATACAGGAGAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | AGCGCCGCAGCTCAAGCCCCAGCGCGCGAGCCACGTTaGCCACGAGCGCGCCGGGTGCCTGCTCCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SAAAQAPAREPR*PRARRVPAPLA Trigger: TGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTGGGGCTTGAGCTGCGGCGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | AAGCGCCGCAGCTCAAGCCCCAGCGCGCGAGCCACGTaGCCCACGAGCGCGCCGGGTGCCTGCTCCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: KRRSSSPSARAT*PTSAPGACSSG Trigger: GCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTGGGGCTTGAGCTGCGGCGCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | CGTGGATGCTCTGTCGCCGCAGGTCTGGTGCCCGCCTaGTCCATAGCCACTGGCCGCGGCGGAGGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RGCSVAAGLVPA*SIATGRGGGSR Trigger: CCGGCTGCCTCCGCCGCGGCCAGTGGCTATGGAGCAGGCGGGCACCAGACCTGCGGCGACAGAGCATCCACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | AGCAGCAGCCAGGGCATGGGCCGCCGGAGCCGTGGATaGTCTGTCGCCGCAGGTCTGGTGCCCGCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSQGMGRRSRG*SVAAGLVPACS Trigger: GGAGCAGGCGGGCACCAGACCTGCGGCGACAGAGCATCCACGGCTCCGGCGGCCCATGCCCTGGCTGCTGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 90 bp | CCCGGCCCCAAGCGCCGCAGCTCAAGCCCCAGCGCGCGAGCCACGTaGCCCACGAGCGCGCCGGGTGCCTGCTCCTCTGGCACAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: PGPKRRSSSPSARAT*PTSAPGACSSGTEY Trigger: ATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTGGGGCTTGAGCTGCGGCGCTTGGGGCCGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | CACGTTGCCCACGAGCGCGCCGGGTGCCTGCTCCTCTaGCACAGAGTATCGCAGCTGGGAGGCCGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: HVAHERAGCLLL*HRVSQLGGRRA Trigger: GGCCCTGCGGCCTCCCAGCTGCGATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | CAGCGCGCGAGCCACGTTGCCCACGAGCGCGCCGGGTaGCTGCTCCTCTGGCACAGAGTATCGCAGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QRASHVAHERAG*LLLWHRVSQLG Trigger: TCCCAGCTGCGATACTCTGTGCCAGAGGAGCAGGCACCCGGCGCGCTCGTGGGCAACGTGGCTCGCGCGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GCTCCAGGTAGCGCGGACTGGGCGCACCCAGATGGTTaGTGCGCAAGCAACCCGGCCCCAAGCGCCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: APGSADWAHPDG*CASNPAPSAAA Trigger: AGCTGCGGCGCTTGGGGCCGGGTTGCTTGCGCATCAACCATCTGGGTGCGCCCAGTCCGCGCTACCTGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TCACCGCCACGGGGTTGTGCGCCAGCACTTCCAAGCTaGGCAGGCAGCGAGGCCGCTGCTCACACAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPPRGCAPALPS*AGSEAAAHTAP Trigger: AGGCGCTGTGTGAGCAGCGGCCTCGCTGCCTGCTCAGCTTGGAAGTGCTGGCGCACAACCCCGTGGCGGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TTGGCGCCCACGTCGGGGTCCTGCGCACTCTCTATGTaGAAGCGCGCTCCAGGCGCCACCGATTCGCTTACC | + |
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Preference number: 6 (lower is better) Translates to: LAPTSGSCALSM*KRAPGATDSLT Trigger: GGTAAGCGAATCGGTGGCGCCTGGAGCGCGCTTTCACATAGAGAGTGCGCAGGACCCCGACGTGGGCGCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | CTCCGAGTCGCTCAACCCGGCTCGGCTTCCTGCTGCTaGTGCCGCTACAGCTCCAGGGGGAGGGAAAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRVAQPGSASCC*CRYSSRGREKE Trigger: TTCCTTTTCCCTCCCCCTGGAGCTGTAGCGGCAGCAGCAGCAGGAAGCCGAGCCGGGTTGAGCGACTCGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615316.1 |
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| CDS CCA 72 bp | TGGCCTGTGAGATTCCTGCTGTCAGTCACTGCTGCTTaGGCTCCCGAAGGCCCTGGTCCTGTCTGGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: WPVRFLLSVTAA*APEGPGPVWAP Trigger: AGGGGCCCAGACAGGACCAGGGCCTTCGGGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | CGCTGCTCACACAGCGCCTCCCGATCAATGCGCTCGTaGACGAAGAGCGCTCCACTCGTCAGGTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RCSHSASRSMRS*TKSAPLVRSSS Trigger: GGAGCTGGACCTGACGAGTGGAGCGCTCTTCGTCAACGAGCGCATTGATCGGGAGGCGCTGTGTGAGCAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | TTGGCCTGTGAGATTCCTGCTGTCAGTCACTGCTGCTaGGGCTCCCGAAGGCCCTGGTCCTGTCTGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LACEIPAVSHCC*GSRRPWSCLGP Trigger: GGGGCCCAGACAGGACCAGGGCCTTCGGGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GCTGCTCACACAGCGCCTCCCGATCAATGCGCTCGTTaGCGAAGAGCGCTCCACTCGTCAGGTCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAHTAPPDQCAR*RRALHSSGPAP Trigger: TGGAGCTGGACCTGACGAGTGGAGCGCTCTTCGTCAACGAGCGCATTGATCGGGAGGCGCTGTGTGAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TCTCCCGGTCCGACGTGTAGCTGCTCAAGGAGTACCTaGGCTCACCATTGGAGCCCTCATCCGGGTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPGPTCSCSRST*AHHWSPHPGLR Trigger: CCTCAGACCCGGATGAGGGCTCCAATGGTGAGCTCAGGTACTCCTTGAGCAGCTACACGTCGGACCGGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | CATCCGGGTCTGAGGCATTCAGCTTCACCACCAATGTaGCTGGGGGTGAGTCCTCCCGTAGCTGGACGCGAT | + |
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Preference number: 6 (lower is better) Translates to: HPGLRHSASPPM*LGVSPPVAGRD Trigger: ATCGCGTCCAGCTACGGGAGGACTCACCCCCAGGCACATTGGTGGTGAAGCTGAATGCCTCAGACCCGGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | ACTTTGGCCTGTGAGATTCCTGCTGTCAGTCACTGCTaGTTGGGCTCCCGAAGGCCCTGGTCCTGTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TLACEIPAVSHC*LGSRRPWSCLG Trigger: GCCCAGACAGGACCAGGGCCTTCGGGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | ACCACTTTGGCCTGTGAGATTCCTGCTGTCAGTCACTaGTGCTTGGGCTCCCGAAGGCCCTGGTCCTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: TTLACEIPAVSH*CLGSRRPWSCL Trigger: CAGACAGGACCAGGGCCTTCGGGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAAAGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GGTAGTTGGGCCGCGGGAAACGCGGTGAGTTGTCGTTaGTGTCCAATATTTCCACCTCAACGGCGCTCACCG | + |
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Preference number: 6 (lower is better) Translates to: GSWAAGNAVSCR*CPIFPPQRRSP Trigger: CGGTGAGCGCCGTTGAGGTGGAAATATTGGACATCAACGACAACTCACCGCGTTTCCCGCGGCCCAACTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | CAATTACTCGCACTTCCCCGGTACTGGCATCTATGCTaGAGAGCTGCCTCTCCCGGTCCGACGTGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QLLALPRYWHLC*RAASPGPTCSC Trigger: GCAGCTACACGTCGGACCGGGAGAGGCAGCTCTTCAGCATAGATGCCAGTACCGGGGAAGTGCGAGTAATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GGCCTCCAGACCCAGGCTCACTTTCCGGTTGGGGCCTaGGTCTTGGTCATTGACACTGAGAACGGCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: GLQTQAHFPVGA*VLVIDTENGHN Trigger: ATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTGAGCCTGGGTCTGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | AGGAGTTTCCAAAGCCATTCAGTCGGAAAGGCAGTGTaGCCTCCAGACCCAGGCTCACTTTCCGGTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RSFQSHSVGKAV*PPDPGSLSGWG Trigger: GCCCCAACCGGAAAGTGAGCCTGGGTCTGGAGGCCACACTGCCTTTCCGACTGAATGGCTTTGGAAACTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | AAAGGTCCAGCTGTTGCTGTTGACACCCGCACCGACTaGAGGGGACACTTCTCCTGCCTCTGGTTCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: KGPAVAVDTRTD*RGHFSCLWFLH Trigger: ATGCAGGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000613766.1 |
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| CDS GCA 72 bp | TCATGTCCACCACATATACGTTGGCAGTCACAGTGCTaGTCAGTGGTGGGCTCCCCTTGTCCTGAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SCPPHIRWQSQC*SVVGSPCPEPP Trigger: TGGAGGCTCAGGACAAGGGGAGCCCACCACTGAGCAGCACTGTGACTGCCAACGTATATGTGGTGGACATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | CGTGATGTTGTAGACAGCCACCCGCTCTCGGTCCAGTaGGCCGCTCACCACCAGTGTATAGGAGTTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RDVVDSHPLSVQ*AAHHQCIGVSK Trigger: TTTGGAAACTCCTATACACTGGTGGTGAGCGGCCCACTGGACCGAGAGCGGGTGGCTGTCTACAACATCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | AAAGGTCCAGCTGTTGCTGTTGACACCCGCACCGACTaGAGGGGACACTTCTCCTGCCTCTGGTTTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: KGPAVAVDTRTD*RGHFSCLWFFL Trigger: GAGGAAAAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673410.1 |
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| CDS CAA 90 bp | GGGCCTGAGTCTTGGTCATTGACACTGAGAACGGCCACAATGGTGTaGGGTGTAGCATTCTCAGGCACTGGGCTATACAGGTCCGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GPESWSLTLRTATMV*GVAFSGTGLYRSVS Trigger: GCTCACGGACCTGTATAGCCCAGTGCCTGAGAATGCTACACCCAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TGTCAGAGATCTCAACCTTCAGTGTACGCAGGGATGTaGGCTGCGGTATTCCCCCATCTGTGGCTGTCACCG | + |
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Preference number: 6 (lower is better) Translates to: CQRSQPSVYAGM*AAVFPHLWLSP Trigger: CGGTGACAGCCACAGATGGGGGAATACCGCAGCTCACATCCCTGCGTACACTGAAGGTTGAGATCTCTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GCCCTGGTCCTGTCTGGGCCCCTGTATTGTAAAACATaGAAGTGTCACTCCCTGAGCCTGCTGTCAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: ALVLSGPLYCKT*KCHSLSLLSDR Trigger: CCTGTCTGACAGCAGGCTCAGGGAGTGACACTTTCATGTTTTACAATACAGGGGCCCAGACAGGACCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | TTACGCAGCACCAGCTCAAGCACTTTACTGTTCTCCTaGAGGGGCTTAAGGTCCAGCTCGAAGTGCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRSTSSSTLLFS*RGLRSSSKCSL Trigger: CAGCGAGCACTTCGAGCTGGACCTTAAGCCCCTGCAGGAGAACAGTAAAGTGCTTGAGCTGGTGCTGCGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | CATTCATGTCCACCACATATACGTTGGCAGTCACAGTaGTGCTCAGTGGTGGGCTCCCCTTGTCCTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HSCPPHIRWQSQ*CSVVGSPCPEP Trigger: AGGCTCAGGACAAGGGGAGCCCACCACTGAGCAGCACTGTGACTGCCAACGTATATGTGGTGGACATGAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | AGACCCAGGCTCACTTTCCGGTTGGGGCCTGAGTCTTaGTCATTGACACTGAGAACGGCCACAATGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RPRLTFRLGPES*SLTLRTATMVL Trigger: CAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTGAGCCTGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTCATTTTGAGAAACAGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVAHFEKQPH Trigger: ATGAGGCTGTTTCTCAAAATGAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289269.7 |
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| CDS CAA 90 bp | TCCAGACCCAGGCTCACTTTCCGGTTGGGGCCTGAGTCTTGGTCATaGACACTGAGAACGGCCACAATGGTGTTGGGTGTAGCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRPRLTFRLGPESWS*TLRTATMVLGVAFS Trigger: TGAGAATGCTACACCCAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTGAGCCTGGGTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TTGGTGAGGGAGCCATTCCCTCGAACTTCAATGAAGTaGGGCTGCACTTTGAGGCCATGCGGTATCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVREPFPRTSMK*GCTLRPCGILA Trigger: TGCCAGGATACCGCATGGCCTCAAAGTGCAGCCTCACTTCATTGAAGTTCGAGGGAATGGCTCCCTCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | GGACCTTTCCCTTACTCCACAGAAGCCTCCACAGCATaGAGTGCCATACGCAGTGTAGCGGTAGCACTTGAT | + |
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Preference number: 6 (lower is better) Translates to: GPFPYSTEASTA*SAIRSVAVALD Trigger: ATCAAGTGCTACCGCTACACTGCGTATGGCACTGCATGCTGTGGAGGCTTCTGTGGAGTAAGGGAAAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | GCCACTGGCACTGTTAATGGAGACATAGGAGGTGACTaGCAGCCCTTGAATCTCCCTCTCCAGAAGGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: ATGTVNGDIGGD*QPLNLPLQKGV Trigger: TACTCCCTTCTGGAGAGGGAGATTCAAGGGCTGCCAGTCACCTCCTATGTCTCCATTAACAGTGCCAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | AGGCTCACTTTCCGGTTGGGGCCTGAGTCTTGGTCATaGACACTGAGAACGGCCACAATGGTGTTGGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: RLTFRLGPESWS*TLRTATMVLGV Trigger: TACACCCAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGACTCAGGCCCCAACCGGAAAGTGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | TACCTGAAGCTGGTAGTTGGGCCGCGGGAAACGCGGTaGGTTGTCGTTGATGTCCAATATTTCCACCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: YLKLVVGPRETR*VVVDVQYFHLN Trigger: GTTGAGGTGGAAATATTGGACATCAACGACAACTCACCGCGTTTCCCGCGGCCCAACTACCAGCTTCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | GAAGCCTCTCCTTTGCGGCGGAGGAGAAAGGAAACTTaGGTCTGCTTTTTAGGTTCGGGACCGGATTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: EASPLRRRRKET*VCFLGSGPDCL Trigger: CAAACAATCCGGTCCCGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673410.1 |
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| CDS CAA 72 bp | GATGGCTCTCCATTATCTCGGACCACCACGGTCAGGTaGAAAGTGCTACCACTCTCATCTCCCATCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: DGSPLSRTTTVR*KVLPLSSPIFL Trigger: CAGGAAGATGGGAGATGAGAGTGGTAGCACTTTCAACCTGACCGTGGTGGTCCGAGATAATGGAGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS GCA 72 bp | TTGAATCTCCCTCTCCAGAAGGGAGTAGGTCACCTCTaGATTCTCCTTTTCATCTGGGTCTGTGGCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LNLPLQKGVGHL*ILLFIWVCGLH Trigger: GTGCAAGCCACAGACCCAGATGAAAAGGAGAATGCAGAGGTGACCTACTCCCTTCTGGAGAGGGAGATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | AAGGGAGTAGGTCACCTCTGCATTCTCCTTTTCATCTaGGTCTGTGGCTTGCACAGTACAGAGCAACACACC | + |
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Preference number: 6 (lower is better) Translates to: KGVGHLCILLFI*VCGLHSTEQHT Trigger: GGTGTGTTGCTCTGTACTGTGCAAGCCACAGACCCAGATGAAAAGGAGAATGCAGAGGTGACCTACTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | TCTTGGTCATTGACACTGAGAACGGCCACAATGGTGTaGGGTGTAGCATTCTCAGGCACTGGGCTATACAGG | + |
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Preference number: 6 (lower is better) Translates to: SWSLTLRTATMV*GVAFSGTGLYR Trigger: CCTGTATAGCCCAGTGCCTGAGAATGCTACACCCAACACCATTGTGGCCGTTCTCAGTGTCAATGACCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 90 bp | AGCCTCATTTTTGAGAATAATCAGGTTCCCAGCATTCTGACCACTTaGGCCTGTGAGATTCCTGCTGTCAGTCACTGCTGCTTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLIFENNQVPSILTT*ACEIPAVSHCCLGS Trigger: GGAGCCCAAGCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAAAGTGGTCAGAATGCTGGGAACCTGATTATTCTCAAAAATGAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | CTTTTTAGGTTCGGGACCGGATTGTTTGGGGTTGCCTaGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LFRFGTGLFGVA*SVFKGPAVAVD Trigger: GTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGAACCTAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673410.1 |
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| CDS TCA 72 bp | ATTTCAGAGTATGTCCGAGGGCTCTTAACATGCCTCTaGGTGTCAGGGAGGATTTTGGAAACCCTATCCACC | + |
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Preference number: 6 (lower is better) Translates to: ISEYVRGLLTCL*VSGRILETLST Trigger: GGTGGATAGGGTTTCCAAAATCCTCCCTGACACTCAGAGGCATGTTAAGAGCCCTCGGACATACTCTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CAA 72 bp | TTTGAGAATAATCAGGTTCCCAGCATTCTGACCACTTaGGCCTGTGAGATTCCTGCTGTCAGTCACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FENNQVPSILTT*ACEIPAVSHCC Trigger: GCAGCAGTGACTGACAGCAGGAATCTCACAGGCCAAAGTGGTCAGAATGCTGGGAACCTGATTATTCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS TCA 72 bp | GCCTCATTTTTGAGAATAATCAGGTTCCCAGCATTCTaGCCACTTTGGCCTGTGAGATTCCTGCTGTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASFLRIIRFPAF*PLWPVRFLLSV Trigger: GACTGACAGCAGGAATCTCACAGGCCAAAGTGGTCAGAATGCTGGGAACCTGATTATTCTCAAAAATGAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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| CDS CCA 72 bp | GCAACACACCTGGCAAATTGTTCTCCTGTATGTAGATaGAATAGGAGTCCTCCAGGAAGCTTGGTGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: ATHLANCSPVCR*NRSPPGSLVDC Trigger: ACAATCCACCAAGCTTCCTGGAGGACTCCTATTCCATCTACATACAGGAGAACAATTTGCCAGGTGTGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289269.7 ENST00000615316.1 |
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