Pregenerated sensors for PCDHA6 (Homo sapiens)
Ensembl gene IDs: ENSG00000081842Ensembl transcript IDs: ENST00000378126.4, ENST00000527624.1, ENST00000529310.6
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | ATGAACACTATTGCCTCCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAACTGAGGTGCAGATTGTaGACAGTGATTTCTAATTTC | + |
Preference number: 2 (lower is better) Translates to: MNTIASRNHKSEKGTTDKLRCRL*TVISNF Trigger: GAAATTAGAAATCACTGTCCACAATCTGCACCTCAG...TTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGGAGGCAATAGTGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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3UTR GCA 72 bp | CAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTaGGGCGGAGGAGAAAGGAAACTTGGGTCTGCTTTT | + |
Preference number: 3 (lower is better) Translates to: QPLTGGAGKPLL*GGGERKLGSAF Trigger: AAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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3UTR GCA 72 bp | GAAAAAGGAGCAGGGAATTGCTACATGGGAGAGATTTaGCATTATTACAAAAACTGGCTAAGTGGCTTGTTT | + |
Preference number: 3 (lower is better) Translates to: EKGAGNCYMGEI*HYYKNWLSGLF Trigger: AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCAATTCCCTGCTCCTTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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3UTR-3UTR CAA 90 bp | CGGAATCACAAGTCTGAAAAGGGAACCACAGATAAAAACTATGATGATCAGAGTATTCTGAGGTGCAGATaGTGGACAGTGATTTCTAAT | + |
Preference number: 3 (lower is better) Translates to: RNHKSEKGTTDKNYDDQSILRCR*WTVISN Trigger: ATTAGAAATCACTGTCCACAATCTGCACCTCAGAAT...ACTCTGATCATCATAGTTTTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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3UTR GCA 72 bp | CAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTaGACACCCTCATGGAATATTGTCAGTATTCATTCC | + |
Preference number: 3 (lower is better) Translates to: QLQRGQIGKICA*TPSWNIVSIHS Trigger: GGAATGAATACTGACAATATTCCATGAGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR GCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGAAGCGAGCGCTGCTTaGCGGGGGCTGCAGCTCATA | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQEASAA*RGLQLI Trigger: TATGAGCTGCAGCCCCCGGCAAGCAGCGCTCGCTTC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR GCA 90 bp | CCTCAATGGTTTAAAAGGGGGACAATAAATGAACACTATTGCCTCCCGGAATCAACGGGAAGCGAGCGCTaGTTGCCGGGGGCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: PQWFKRGTINEHYCLPESTGSER*LPGAAA Trigger: AGCTGCAGCCCCCGGCAAGCAGCGCTCGCTTCCCGT...TGATTCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTTTTAAACCATTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGACACCCGCACCGACTaGAGGGGACACTTCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQDTRTD*RGHFSC Trigger: GCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTCTCACTGGCGGGGCTaGGAAGCCTCTCCTTTGCGG | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQSHWRG*EASPLR Trigger: CCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGAGTCCAACCTCTCACTaGCGGGGCTGGGAAGCCTCT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQSPTSH*RGWEAS Trigger: AGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACT...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR TCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTTGGGCTGTCGTGGCTaGAACTGCAGCAGCTCTAGC | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQLGCRG*NCSSSS Trigger: GCTAGAGCTGCTGCAGTTTCAGCCACGACAGCCCAA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527624.1 |
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CDS-3UTR GCA 90 bp | CCTCAATGGTTTAAAAGGGGGACAATAAATGAACACTATTGCCTCCCGGAATCAGAAGCGAGCGCTGCTTaGCGGGGGCTGCAGCTCATA | + |
Preference number: 4 (lower is better) Translates to: PQWFKRGTINEHYCLPESEASAA*RGLQLI Trigger: TATGAGCTGCAGCCCCCGGCAAGCAGCGCTCGCTTC...TGATTCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTTTTAAACCATTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTGCACTGGATACTGTTaGCCACTGCTGATCAGGCCC | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQCTGYC*PLLIRP Trigger: GGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCGACACCCGCACCGACTaGAGGGGACACTTCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSDTRTD*RGHFSC Trigger: GCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTC...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGCCACACATACCCAGTaGCCACAAACTCCCAAGCTG | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQATHTQ*PQTPKL Trigger: CAGCTTGGGAGTTTGTGGCCACTGGGTATGTGTGGC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGTTCTGGTGTTGCACTaGATACTGTTGGCCACTGCT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQVLVLH*ILLATA Trigger: AGCAGTGGCCAACAGTATCCAGTGCAACACCAGAAC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTCCTGCCTCTGGTTCTaGTGTTGCACTGGATACTGT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQSCLWF*CCTGYC Trigger: ACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCAACGCCAGTCAGGGTTaGGCTGTCGTGGTTTGGCAT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSNASQG*AVVVWH Trigger: ATGCCAAACCACGACAGCCCAACCCTGACTGGCGTT...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCTGCACTGGATACTGTTaGCCACTGCTGATCAGGCCC | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSCTGYC*PLLIRP Trigger: GGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCA...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCCGGGACCGGATTGTTTaGGGTTGCCTGGTCCGTATT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSRDRIV*GCLVRI Trigger: AATACGGACCAGGCAACCCCAAACAATCCGGTCCCG...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCGTCTCAGCCAATATCTaGCACTCGCATACCCGCGGT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSVSANI*HSHTRG Trigger: ACCGCGGGTATGCGAGTGCCAGATATTGGCTGAGAC...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTAGGGTTGGGCTGTCGTaGCTGAAACTGCAGCAGCTC | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIRVGLS*LKLQQL Trigger: GAGCTGCTGCAGTTTCAGCCACGACAGCCCAACCCT...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527624.1 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCAACGCCAGTCAGGGTTaGGCTGTCGTGGCTGAAACT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSNASQG*AVVAET Trigger: AGTTTCAGCCACGACAGCCCAACCCTGACTGGCGTT...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527624.1 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCCACTTCTCCTGCCTCTaGTTCTGGTGTTGCACTGGA | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSHFSCL*FWCCTG Trigger: TCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTG...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTTGTTTGGGGTTGCCTaGTCCGTATTTAAAGGTCCA | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQLFGVA*SVFKGP Trigger: TGGACCTTTAAATACGGACCAGGCAACCCCAAACAA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTCGGGACCGGATTGTTTaGGGTTGCCTGGTCCGTATT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIRDRIV*GCLVRI Trigger: AATACGGACCAGGCAACCCCAAACAATCCGGTCCCG...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGATTGCAGGAGATCCTaGGATAATGAATTTGTCGGG | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQDCRRS*DNEFVG Trigger: CCCGACAAATTCATTATCCCAGGATCTCCTGCAATC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCTTGTCTCCTAGAGGGTaGCTGCCACCTCTTGAGTTG | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSLSPRG*LPPLEL Trigger: CAACTCAAGAGGTGGCAGCCACCCTCTAGGAGACAA...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGATACATGGGCTTCAGTaGGGCAAAATGATCACAACC | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQIHGLQ*GKMITT Trigger: GGTTGTGATCATTTTGCCCCACTGAAGCCCATGTAT...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR TCA 90 bp | CCTCAATGGTTTAAAAGGGGGACAATAAATGAACACTATTGCCTCCCGGAATCAAAGGGGGACAATAAATaGACACTATTGCCTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: PQWFKRGTINEHYCLPESKGDNK*TLLPPG Trigger: TCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTT...TGATTCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTTTTAAACCATTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTGGGCTGTCGTGGTTTaGCATCATGATCTTCATTTA | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQWAVVV*HHDLHL Trigger: TAAATGAAGATCATGATGCCAAACCACGACAGCCCA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTCACTTCTCCTGCCTCTaGTTCTGGTGTTGCACTGGA | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIHFSCL*FWCCTG Trigger: TCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTG...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTTCTGTTTCCCAGGGTaGTTCTCTGTTAAAACACTG | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQFCFPG*FSVKTL Trigger: CAGTGTTTTAACAGAGAACCACCCTGGGAAACAGAA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGTGGAAACACAGAATCTaGCAGCCTAGATTCGTAAAT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQWKHRI*QPRFVN Trigger: ATTTACGAATCTAGGCTGCCAGATTCTGTGTTTCCA...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTGTTCTGGTGTTGCACTaGATACTGTTGGCCACTGCT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIVLVLH*ILLATA Trigger: AGCAGTGGCCAACAGTATCCAGTGCAACACCAGAAC...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTTCCTGCCTCTGGTTCTaGTGTTGCACTGGATACTGT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSISCLWF*CCTGYC Trigger: ACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGA...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGAGGAGAAAGGAAACTTaGGTCTGCTTTTTAGGTTCT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQRRKET*VCFLGS Trigger: AGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCT...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGAGATGGCTCTTGGCTaGACCATAAATAAAATTCCT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQEMALG*TINKIP Trigger: AGGAATTTTATTTATGGTCCAGCCAAGAGCCATCTC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR TCA 90 bp | ATGAACACTATTGCCTCCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAATCTTCATTTAAATCCTaGTTCTCCGCCTTACCCATC | + |
Preference number: 4 (lower is better) Translates to: MNTIASRNHKSEKGTTDKSSFKS*FSALPI Trigger: GATGGGTAAGGCGGAGAATCAGGATTTAAATGAAGA...TTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGGAGGCAATAGTGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCCCAATTAGTCTAAGCTaGCTCGTCTCAGCCAATATC | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSPISLS*LVSANI Trigger: GATATTGGCTGAGACGAGCCAGCTTAGACTAATTGG...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGGTAACTAACATGGATTaGAAAGCACTTCGCAAATGT | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQVTNMD*KALRKC Trigger: ACATTTGCGAAGTGCTTTCCAATCCATGTTAGTTAC...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR TCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCTCTTCATTTAAATCCTaGTTCTCCGCCTTACCCATC | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSSSFKS*FSALPI Trigger: GATGGGTAAGGCGGAGAATCAGGATTTAAATGAAGA...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR GCA 90 bp | ATGAACACTATTGCCTCCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAATTAATCCATTTCTTCTaGGTCCGCCATCATTCAACA | + |
Preference number: 4 (lower is better) Translates to: MNTIASRNHKSEKGTTDKLIHFF*VRHHST Trigger: TGTTGAATGATGGCGGACGCAGAAGAAATGGATTAA...TTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGGAGGCAATAGTGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTTTGTTTGGGGTTGCCTaGTCCGTATTTAAAGGTCCA | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSILFGVA*SVFKGP Trigger: TGGACCTTTAAATACGGACCAGGCAACCCCAAACAA...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGCATTATTACAAAAACTaGCTAAGTGGCTTGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: LQISEVSKRAHVDRKKEQHYYKN*LSGLFP Trigger: TGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATG...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCGAAAACAAGCCAGAGTaGAGAGAAAGAGTTAACACC | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSENKPE*RERVNT Trigger: GGTGTTAACTCTTTCTCTCCACTCTGGCTTGTTTTC...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTGTAAGGTCAGATACATaGGCTTCAGTGGGGCAAAAT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIVRSDT*ASVGQN Trigger: ATTTTGCCCCACTGAAGCCCATGTATCTGACCTTAC...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR GCA 90 bp | CCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAAAACTATGATGATCAGAATAAATGAACACTATTaGCTCCCGGAATCACAAGTC | + |
Preference number: 4 (lower is better) Translates to: PGITSLKREPQIKTMMIRINEHY*LPESQV Trigger: GACTTGTGATTCCGGGAGGCAATAGTGTTCATTTAT...TCTGATCATCATAGTTTTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAAAACTATGATGATCAGATGGAAACACAGAATCTaGCAGCCTAGATTCGTAAAT | + |
Preference number: 4 (lower is better) Translates to: PGITSLKREPQIKTMMIRWKHRI*QPRFVN Trigger: ATTTACGAATCTAGGCTGCCAGATTCTGTGTTTCCA...TCTGATCATCATAGTTTTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTTCACTTTTGTCAATTTaGCTGTTAGTAGGCTCCTGC | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSISLLSI*LLVGSC Trigger: GCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGA...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCGCTTGCACACCCTCATaGAATATTGTCAGTATTCAT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSACTPS*NIVSIH Trigger: ATGAATACTGACAATATTCCATGAGGGTGTGCAAGC...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR GCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTTTAATCCATTTCTTCTaGGTCCGCCATCATTCAACA | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSILIHFF*VRHHST Trigger: TGTTGAATGATGGCGGACGCAGAAGAAATGGATTAA...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTTGGAAACACAGAATCTaGCAGCCTAGATTCGTAAAT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIWKHRI*QPRFVN Trigger: ATTTACGAATCTAGGCTGCCAGATTCTGTGTTTCCA...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CGGAATCACAAGTCTGAAAAGGGAACCACAGATAAAAACTATGATGATCAGAGTCTGAGGTGCAGATTGTaGACAGTGATTTCTAATTTC | + |
Preference number: 4 (lower is better) Translates to: RNHKSEKGTTDKNYDDQSLRCRL*TVISNF Trigger: GAAATTAGAAATCACTGTCCACAATCTGCACCTCAG...ACTCTGATCATCATAGTTTTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CCA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTCAGGGAATTGCTACATaGGAGAGATTTGCCATTATT | + |
Preference number: 4 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIQGIAT*ERFAII Trigger: AATAATGGCAAATCTCTCCCATGTAGCAATTCCCTG...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCCATTATTACAAAAACTaGCTAAGTGGCTTGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSHYYKN*LSGLFP Trigger: TGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATG...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CCA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCCTTTTGCATAAGTATTaGAAAAGGATCTGGCCTTTT | + |
Preference number: 4 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSLLHKY*KRIWPF Trigger: AAAAGGCCAGATCCTTTTCCAATACTTATGCAAAAG...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000529310.6 |
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CDS GCA 90 bp | CTGTTGGCCACTGCTGATCAGGCCCTCCTGGACCAGCCCGTAGAATaGCAGCCTCCTCTAGGTGCACAGAGCTGTGCATGCCTGCTCTCA | + |
Preference number: 5 (lower is better) Translates to: LLATADQALLDQPVE*QPPLGAQSCACLLS Trigger: TGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGCCTGATCAGCAGTGGCCAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CAA 90 bp | CTGCAGATTTCTGAGGTCTCTAAGAGGGCTCATGTAGATAGGAAAAAGGAGCAGAGGTCCTCGCGGTCTTaGGAGGCCATCCTGAACAGG | + |
Preference number: 5 (lower is better) Translates to: LQISEVSKRAHVDRKKEQRSSRS*EAILNR Trigger: CCTGTTCAGGATGGCCTCCAAAGACCGCGAGGACCT...CTGCTCCTTTTTCCTATCTACATGAGCCCTCTTAGAGACCTCAGAAATCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CAA 90 bp | CCCGGAATCACAAGTCTGAAAAGGGAACCACAGATAAAAACTATGATGATCAGAAGGTCCTCGCGGTCTTaGGAGGCCATCCTGAACAGG | + |
Preference number: 5 (lower is better) Translates to: PGITSLKREPQIKTMMIRRSSRS*EAILNR Trigger: CCTGTTCAGGATGGCCTCCAAAGACCGCGAGGACCT...TCTGATCATCATAGTTTTTATCTGTGGTTCCCTTTTCAGACTTGTGATTCCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CAA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTAGGTCCTCGCGGTCTTaGGAGGCCATCCTGAACAGG | + |
Preference number: 5 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIRSSRS*EAILNR Trigger: CCTGTTCAGGATGGCCTCCAAAGACCGCGAGGACCT...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CAA 90 bp | CCTCAATGGTTTAAAAGGGGGACAATAAATGAACACTATTGCCTCCCGGAATCACGGGAGGAGCAGACATaGCTTTCCCAATCTATCCTC | + |
Preference number: 5 (lower is better) Translates to: PQWFKRGTINEHYCLPESREEQT*LSQSIL Trigger: GAGGATAGATTGGGAAAGCAATGTCTGCTCCTCCCG...TGATTCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTTTTAAACCATTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CAA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTCGGGAGGAGCAGACATaGCTTTCCCAATCTATCCTC | + |
Preference number: 5 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIREEQT*LSQSIL Trigger: GAGGATAGATTGGGAAAGCAATGTCTGCTCCTCCCG...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CAA 90 bp | CCTCAATGGTTTAAAAGGGGGACAATAAATGAACACTATTGCCTCCCGGAATCAGTAAATCAGCACTCTTaGTTCCTCTACCGGGAACAA | + |
Preference number: 5 (lower is better) Translates to: PQWFKRGTINEHYCLPESVNQHS*FLYREQ Trigger: TTGTTCCCGGTAGAGGAACAAAGAGTGCTGATTTAC...TGATTCCGGGAGGCAATAGTGTTCATTTATTGTCCCCCTTTTAAACCATTGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378126.4 |
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CDS-3UTR CAA 90 bp | CTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCGTAAATCAGCACTCTTaGTTCCTCTACCGGGAACAA | + |
Preference number: 5 (lower is better) Translates to: LHGRDLPLLQKLAKWLVSVNQHS*FLYREQ Trigger: TTGTTCCCGGTAGAGGAACAAAGAGTGCTGATTTAC...GGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS-3UTR CAA 90 bp | CATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCCATTGTAAATCAGCACTCTTaGTTCCTCTACCGGGAACAA | + |
Preference number: 5 (lower is better) Translates to: HGRDLPLLQKLAKWLVSIVNQHS*FLYREQ Trigger: TTGTTCCCGGTAGAGGAACAAAGAGTGCTGATTTAC...AATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527624.1 ENST00000529310.6 |
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CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTGAAACTGCAGCAGCTCTAGCT | + |
Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVAETAAALA Trigger: AGCTAGAGCTGCTGCAGTTTCAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527624.1 |
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CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGTTTGGCATCATGATCTTCATTTA | + |
Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVVWHHDLHL Trigger: TAAATGAAGATCATGATGCCAAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529310.6 |