Pregenerated sensors for PCDHA13 (Homo sapiens)
Ensembl gene IDs: ENSG00000239389Ensembl transcript IDs: ENST00000289272.3, ENST00000409494.5, ENST00000617769.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCTGTGCCTCCCGCGCTaGCAGCCCCGGGCGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPLCLPR*QPRASA Trigger: TGCTGACGCCCGGGGCTGGCAGCGCGGGAGGCACAG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCTGTGCCTCCCGCGCTaGCAGCCCCGGGCGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHLCLPR*QPRASA Trigger: TGCTGACGCCCGGGGCTGGCAGCGCGGGAGGCACAG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAGCCAGAGCAGTAGTTaGCGCGGTCTTGGGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPSQSSS*RGLGPP Trigger: AGGAGGCCCAAGACCGCGGCAACTACTGCTCTGGCT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPNASQG*AVVALS Trigger: TGAAAGAGCCACGACAGCCCAACCCTGACTGGCGTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGCGTCAAGGTGCAGGTaGCCTGTCCATTTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHASRCR*PVHLSQ Trigger: CTGGCTCAAATGGACAGGTCACCTGCACCTTGACGC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACATAATGGCGCTAGGCTaGGTGTCTTCTCTGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHIMALG*VSSLMG Trigger: CCCCATCAGAGAAGACACTCAGCCTAGCGCCATTAT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTCACTAATGTTCCATTaGAGGCGTTCTCTAACACCG | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPSLMFH*RRSLTP Trigger: CGGTGTTAGAGAACGCCTTCAATGGAACATTAGTGA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTTCTCTGATGGGGAGTaGCAAAGAAGTGATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPFSDGE*QRSDGN Trigger: GTTACCATCACTTCTTTGTCACTCCCCATCAGAGAA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCAGTCGGTAGGTCAATaGCGAGTTTACTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPQSVGQ*RVYSNI Trigger: GATATTGGAGTAAACTCGGCATTGACCTACCGACTG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAAATGCATATACCACTaGAGGCCATACAGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPKCIYH*RPYRPS Trigger: AGAAGGCCTGTATGGCCTGCAGTGGTATATGCATTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAAGGCCCAATTTTTATaGCTTCCTAGTGCGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPKAQFL*LPSAEG Trigger: TCCTTCCGCACTAGGAAGCCATAAAAATTGGGCCTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR TCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTTTGTGCGTCCAAAGTaGAATAATCGTTGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPFVRPK*NNRWDP Trigger: TGGATCCCAACGATTATTTCACTTTGGACGCACAAA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTACCAAAAGGGTACAATaGCCCGCCATTGGAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPTKRVQ*PAIGIF Trigger: AAATATTCCAATGGCGGGTCATTGTACCCTTTTGGT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCGGATTTATGGTAAATaGATATACCACTGCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPRIYGK*IYHCRP Trigger: TGGCCTGCAGTGGTATATGCATTTACCATAAATCCG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTCTCTGATGGGGAGTaGCAAAGAAGTGATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHFSDGE*QRSDGN Trigger: GTTACCATCACTTCTTTGTCACTCCCCATCAGAGAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAAATGCATATACCACTaGAGGCCATACAGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHKCIYH*RPYRPS Trigger: AGAAGGCCTGTATGGCCTGCAGTGGTATATGCATTT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTTGTGCGTCCAAAGTaGAATAATCGTTGGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHFVRPK*NNRWDP Trigger: TGGATCCCAACGATTATTTCACTTTGGACGCACAAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAATAAACTATGTTCCTaGATTTCCTCTCTGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPNKLCS*ISSLSS Trigger: ACTGGACAGAGAGGAAATTCAGGAACATAGTTTATT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACACCAAAAGGGTACAATaGCCCGCCATTGGAATATTT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHTKRVQ*PAIGIF Trigger: AAATATTCCAATGGCGGGTCATTGTACCCTTTTGGT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAACCTCAGAGCTATCTaGAATATATACAACGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPNLRAI*NIYNAL Trigger: TAAGGCGTTGTATATATTGCAGATAGCTCTGAGGTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCGGAGGTCTAGATTCTaGAATGATTATTCGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPRRSRF*NDYSFL Trigger: AAGAAACGAATAATCATTGCAGAATCTAGACCTCCG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGATAATGAAGACATTTaGTCAAGACTGTTTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPDNEDI*SRLFCA Trigger: CGCACAAAACAGTCTTGAGCAAATGTCTTCATTATC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CCA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGTTTACCTCCATCACTaGCTGTCAGTAATAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPVYLHH*LSVINY Trigger: ATAGTTTATTACTGACAGCCAGTGATGGAGGTAAAC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAGGTATTCCGCTTTCTaGTATATTTTCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHRYSAF*YIFCRK Trigger: CTTCCTGCAGAAAATATAGCAGAAAGCGGAATACCT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACACAATGACCCGCCATTaGAATATTTCCTTTGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHTMTRH*NISFVN Trigger: GTTGACAAAGGAAATATTCCAATGGCGGGTCATTGT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR TCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAATAAACTATGTTCCTaGATTTCCTCTCTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHNKLCS*ISSLSS Trigger: ACTGGACAGAGAGGAAATTCAGGAACATAGTTTATT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAACCTCAGAGCTATCTaGAATATATACAACGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHNLRAI*NIYNAL Trigger: TAAGGCGTTGTATATATTGCAGATAGCTCTGAGGTT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR GCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGATAATGAAGACATTTaGTCAAGACTGTTTTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHDNEDI*SRLFCA Trigger: CGCACAAAACAGTCTTGAGCAAATGTCTTCATTATC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CCA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGTTTACCTCCATCACTaGCTGTCAGTAATAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHVYLHH*LSVINY Trigger: ATAGTTTATTACTGACAGCCAGTGATGGAGGTAAAC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS GCA 90 bp | AGGATCAGAAGCCAGAGCAGTAGTTGCCGCGGTCTTGGGCCTCCTTaGCAGGAAGACAGCATGGTACACTCCAAAAACCTCAGAGCTATC | + |
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Preference number: 5 (lower is better) Translates to: RIRSQSSSCRGLGPP*QEDSMVHSKNLRAI Trigger: GATAGCTCTGAGGTTTTTGGAGTGTACCATGCTGTCTTCCTGGCAAGGAGGCCCAAGACCGCGGCAACTACTGCTCTGGCTTCTGATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS CCA 90 bp | GCAGTAGTTGCCGCGGTCTTGGGCCTCCTTGCCAGGAAGACAGCATaGTACACTCCAAAAACCTCAGAGCTATCTGCAATATATACAACG | + |
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Preference number: 5 (lower is better) Translates to: AVVAAVLGLLARKTA*YTPKTSELSAIYTT Trigger: CGTTGTATATATTGCAGATAGCTCTGAGGTTTTTGGAGTGTACCATGCTGTCTTCCTGGCAAGGAGGCCCAAGACCGCGGCAACTACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGTAGTTGCCGCGGTCTaGGGCCTCCTTGCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPVVAAV*GLLARK Trigger: CTTCCTGGCAAGGAGGCCCAAGACCGCGGCAACTAC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCTCACCGGGACCGGATaGTTTGGGGTTGCCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPLTGTG*FGVAWS Trigger: GGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCGGTCTTGGGCCTCCTaGCCAGGAAGACAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPRSWAS*PGRQHG Trigger: ACCATGCTGTCTTCCTGGCAAGGAGGCCCAAGACCG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGTCCAGCTGTTGCTGTaGACACCCGCACCGACTGGA | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPVQLLL*TPAPTG Trigger: TCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGAC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCCGGGACCGGATTGTTaGGGGTTGCCTGGTCCGTAT | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPPGPDC*GLPGPY Trigger: ATACGGACCAGGCAACCCCAAACAATCCGGTCCCGG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAGGTTCGGGACCGGATaGTTTGGGGTTGCCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPRFGTG*FGVAWS Trigger: GGACCAGGCAACCCCAAACAATCCGGTCCCGAACCT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGTAGTTGCCGCGGTCTaGGGCCTCCTTGCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHVVAAV*GLLARK Trigger: CTTCCTGGCAAGGAGGCCCAAGACCGCGGCAACTAC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTGGGAAGCCTCTCCTTaGCGGCGGAGGAGAAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPWEASP*RRRRKE Trigger: TTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCGGTCTTGGGCCTCCTaGCCAGGAAGACAGCATGGT | + |
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Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHRSWAS*PGRQHG Trigger: ACCATGCTGTCTTCCTGGCAAGGAGGCCCAAGACCG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTTGCACTGGATACTGTaGGCCACTGCTGATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPLHWIL*ATADQA Trigger: GGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGTCCAGCTGTTGCTGTaGACACCCGCACCGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHVQLLL*TPAPTG Trigger: TCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGAC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTTAAAGGTCCAGCTGTaGCTGTTGACACCCGCACCG | + |
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Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPLKVQL*LLTPAP Trigger: CGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTCAGTGGGGGTAGTTTaGTCTCCTAGAGGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPSVGVV*SPRGWL Trigger: CAGCCACCCTCTAGGAGACAAAACTACCCCCACTGA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS GCA 90 bp | TGCCAGGAAGACAGCATGGTACACTCCAAAAACCTCAGAGCTATCTaGAATATATACAACGCCTTACCTCAAACTGTCTCTCAAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: CQEDSMVHSKNLRAI*NIYNALPQTVSQGP Trigger: TGGGCCTTGAGAGACAGTTTGAGGTAAGGCGTTGTATATATTGCAGATAGCTCTGAGGTTTTTGGAGTGTACCATGCTGTCTTCCTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTGGGAAGCCTCTCCTTaGCGGCGGAGGAGAAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHWEASP*RRRRKE Trigger: TTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGGGTCTCCTAAAGCCTaGTCAGTGGGGGTAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPGSPKA*SVGVVL Trigger: CAAAACTACCCCCACTGACAAGGCTTTAGGAGACCC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTCGGGACCGGATTGTTaGGGGTTGCCTGGTCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHSGPDC*GLPGPY Trigger: ATACGGACCAGGCAACCCCAAACAATCCGGTCCCGA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409494.5 |
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| CDS CCA 90 bp | TATACAACGCCTTACCTCAAACTGTCTCTCAAGGCCCAATTTTTATaGCTTCCTAGTGCGGAAGGATTCGCAAGAGGTATTCCGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: YTTPYLKLSLKAQFL*LPSAEGFARGIPLS Trigger: AGAAAGCGGAATACCTCTTGCGAATCCTTCCGCACTAGGAAGCCATAAAAATTGGGCCTTGAGAGACAGTTTGAGGTAAGGCGTTGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTGCACTGGATACTGTaGGCCACTGCTGATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHLHWIL*ATADQA Trigger: GGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCTGGTTCTGGTGTaGCACTGGATACTGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHPLVLV*HWILLA Trigger: GGCCAACAGTATCCAGTGCAACACCAGAACCAGAGG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGTGGCTTGTTTCCATTaGAGGACCTCACTGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPVACFH*RTSLVT Trigger: AGTGACCAGTGAGGTCCTCAAATGGAAACAAGCCAC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTCAGTGGGGGTAGTTTaGTCTCCTAGAGGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHSVGVV*SPRGWL Trigger: CAGCCACCCTCTAGGAGACAAAACTACCCCCACTGA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTGCCAGCAGAAGTCTaGGCACGAGATGGCTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHLPAEV*ARDGSW Trigger: CCAAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGCTTTATCCATTCCCTaGCCAGCAGAAGTCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPALSIP*PAEVLA Trigger: TGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGC...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTGGGATAATGAATTaGTCGGGCAACTCACCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHPGIMN*SGNSPG Trigger: TCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGGGTCTCCTAAAGCCTaGTCAGTGGGGGTAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHGSPKA*SVGVVL Trigger: CAAAACTACCCCCACTGACAAGGCTTTAGGAGACCC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCGGATTGTTTGGGGTaGCCTGGTCCGTATTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHPDCLG*PGPYLK Trigger: CTTTAAATACGGACCAGGCAACCCCAAACAATCCGG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAAAAGGAGCAGGGAATaGCTACATGGGAGAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPKRSRE*LHGRDL Trigger: CAAATCTCTCCCATGTAGCAATTCCCTGCTCCTTTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS TCA 90 bp | GTGATAATGAAGACATTTGCTCAAGACTGTTTTGTGCGTCCAAAGTaGAATAATCGTTGGGATCCAGTCGGTAGGTCAATGCCGAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VIMKTFAQDCFVRPK*NNRWDPVGRSMPSL Trigger: TAAACTCGGCATTGACCTACCGACTGGATCCCAACGATTATTTCACTTTGGACGCACAAAACAGTCTTGAGCAAATGTCTTCATTATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTCACTTTATAAACGGATaGGTAAAATTCCGGGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPHFING*VKFRGV Trigger: AACGCCCCGGAATTTTACCAATCCGTTTATAAAGTG...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAACTGGCTAAGTGGCTaGTTTCCATTTGAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHNWLSG*FPFEDL Trigger: GAGGTCCTCAAATGGAAACAAGCCACTTAGCCAGTT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS TCA 90 bp | TATGGTAAATGCATATACCACTGCAGGCCATACAGGCCTTCTAAATaGGTAAACTATATCTCCATTTGTACCATCATCAGGATCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: YGKCIYHCRPYRPSK*VNYISICTIIRICG Trigger: GCCACAGATCCTGATGATGGTACAAATGGAGATATAGTTTACTCATTTAGAAGGCCTGTATGGCCTGCAGTGGTATATGCATTTACCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTATGATTATTCGTTTCTaGCTTTCAGGGAATATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPMIIRF*LSGNMG Trigger: GCCCATATTCCCTGAAAGCAAGAAACGAATAATCAT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTTTGCTCAAGACTGTTTaGTGCGTCCAAAGTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPLLKTV*CVQSEI Trigger: TATTTCACTTTGGACGCACAAAACAGTCTTGAGCAA...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACGTCACTTTTGTCAATTaGGCTGTTAGTAGGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHVTFVN*AVSRLL Trigger: CAGGAGCCTACTAACAGCCAAATTGACAAAAGTGAC...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | GCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCCTAAACTATATCTCCATTaGTACCATCATCAGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: AFCNFKEVRLVKFVLAHPKLYLH*YHHQDL Trigger: CAGATCCTGATGATGGTACAAATGGAGATATAGTTT...AGGGTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTGCTCAAGACTGTTTaGTGCGTCCAAAGTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHLLKTV*CVQSEI Trigger: TATTTCACTTTGGACGCACAAAACAGTCTTGAGCAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTTTTCTCCTGGGTCTaGTTACCCTTCTTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHFFSWV*LPFFFF Trigger: GAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACAATGGTTCACATGTGTaGGTAACAAGTTTTACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHNGSHV*VTSFTP Trigger: TGGGGTAAAACTTGTTACCAACACATGTGAACCATT...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACCACCCTCATGGAATATaGTCAGTATTCATTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHHPHGI*SVFIPK Trigger: TTTTGGAATGAATACTGACAATATTCCATGAGGGTG...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS-3UTR CAA 90 bp | AAAGCATTCTGCAACTTCAAAGAGGTCAGATTGGTAAAATTTGTGCTTGCACACTTCAAAGAGGTCAGATaGGTAAAATTTGTGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KAFCNFKEVRLVKFVLAHFKEVR*VKFVLA Trigger: TGCAAGCACAAATTTTACCAATCTGACCTCTTTGAA...GTGTGCAAGCACAAATTTTACCAATCTGACCTCTTTGAAGTTGCAGAATGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTCTTTCAAGCATTCTGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVALSSILSP Trigger: AGGACTCAGAATGCTTGAAAGAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS CCA 72 bp | GCCGCGGTCTTGGGCCTCCTTGCCAGGAAGACAGCATaGTACACTCCAAAAACCTCAGAGCTATCTGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: AAVLGLLARKTA*YTPKTSELSAI Trigger: TATTGCAGATAGCTCTGAGGTTTTTGGAGTGTACCATGCTGTCTTCCTGGCAAGGAGGCCCAAGACCGCGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000289272.3 ENST00000409494.5 |
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| CDS GCA 72 bp | TCTCCTTTGCGGCGGAGGAGAAAGGAAACTTGGGTCTaGTTTTTAGGTTCGGGACCGGATTGTTTGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPLRRRRKETWV*FLGSGPDCLGL Trigger: CAACCCCAAACAATCCGGTCCCGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409494.5 |
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| CDS TCA 72 bp | AATGGCGCTAGGCTGAGTGTCTTCTCTGATGGGGAGTaGCAAAGAAGTGATGGTAACCTCTGGGGCGTTATC | + |
|
Preference number: 6 (lower is better) Translates to: NGARLSVFSDGE*QRSDGNLWGVI Trigger: GATAACGCCCCAGAGGTTACCATCACTTCTTTGTCACTCCCCATCAGAGAAGACACTCAGCCTAGCGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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| CDS TCA 72 bp | TCGGACACACTGATTAGGGCAATAATGGCGCTAGGCTaGGTGTCTTCTCTGATGGGGAGTGACAAAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SDTLIRAIMALG*VSSLMGSDKEV Trigger: CACTTCTTTGTCACTCCCCATCAGAGAAGACACTCAGCCTAGCGCCATTATTGCCCTAATCAGTGTGTCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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| CDS CCA 72 bp | CCTTACCTCAAACTGTCTCTCAAGGCCCAATTTTTATaGCTTCCTAGTGCGGAAGGATTCGCAAGAGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: PYLKLSLKAQFL*LPSAEGFARGI Trigger: AATACCTCTTGCGAATCCTTCCGCACTAGGAAGCCATAAAAATTGGGCCTTGAGAGACAGTTTGAGGTAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS TCA 72 bp | AAGACATTTGCTCAAGACTGTTTTGTGCGTCCAAAGTaGAATAATCGTTGGGATCCAGTCGGTAGGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: KTFAQDCFVRPK*NNRWDPVGRSM Trigger: CATTGACCTACCGACTGGATCCCAACGATTATTTCACTTTGGACGCACAAAACAGTCTTGAGCAAATGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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| CDS GCA 72 bp | GACAGCATGGTACACTCCAAAAACCTCAGAGCTATCTaGAATATATACAACGCCTTACCTCAAACTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSMVHSKNLRAI*NIYNALPQTVS Trigger: AGAGACAGTTTGAGGTAAGGCGTTGTATATATTGCAGATAGCTCTGAGGTTTTTGGAGTGTACCATGCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000289272.3 |
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| CDS GCA 72 bp | TGTCCTAATTTCTCCATTGTTCGGATTTATGGTAAATaGATATACCACTGCAGGCCATACAGGCCTTCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: CPNFSIVRIYGK*IYHCRPYRPSK Trigger: TTTAGAAGGCCTGTATGGCCTGCAGTGGTATATGCATTTACCATAAATCCGAACAATGGAGAAATTAGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000289272.3 ENST00000409494.5 ENST00000617769.1 |
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