Pregenerated sensors for PCDHA12 (Homo sapiens)
Ensembl gene IDs: ENSG00000251664Ensembl transcript IDs: ENST00000398631.3, ENST00000613593.1, ENST00000673403.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCGTATTTAAAGGTCCAGCTGTTGCTGTTGACACCCGCACCGACTaGAGGGGACACTTCTCCTGCCTCTGGTTCTTCCCAGATGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SVFKGPAVAVDTRTD*RGHFSCLWFFPDAS Trigger: GGAGGCATCTGGGAAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | CCGGATTGTTTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTaGCTGTTGACACCCGCACCGACTGGAGGGGACACTTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PDCLGLPGPYLKVQL*LLTPAPTGGDTSPA Trigger: GGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | TGTTTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTaGACACCCGCACCGACTGGAGGGGACACTTCTCCTGCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CLGLPGPYLKVQLLL*TPAPTGGDTSPASG Trigger: ACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | TCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATGAATTaGTCGGGCAACTCACCGGGACCGGATTGTTTGGGGTTGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: SCRMEMIAGDPGIMN*SGNSPGPDCLGLPG Trigger: ACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | CCTGGGATAATGAATTTGTCGGGCAACTCACCGGGACCGGATTGTTaGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PGIMNLSGNSPGPDC*GLPGPYLKVQLLLL Trigger: CAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | ATAATGAATTTGTCGGGCAACTCACCGGGACCGGATTGTTTGGGGTaGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTTGACACCC | + |
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Preference number: 2 (lower is better) Translates to: IMNLSGNSPGPDCLG*PGPYLKVQLLLLTP Trigger: GGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | AGATCCTGGGATAATGAATTTGTCGGGCAACTCACCGGGACCGGATaGTTTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RSWDNEFVGQLTGTG*FGVAWSVFKGPAVA Trigger: AGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCAATTTGGCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGAAGGGGACACTTCTCCTaGCTCTGGTTCTTCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: FVNLAVSRLLPDGDDCRRRGHFS*LWFFPD Trigger: ATCTGGGAAGAACCAGAGGCAGGAGAAGTGTCCCCT...TCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 90 bp | GGTCTCCTCCTTTTTGCCGAAGGTTATGAAGTCACTTTTGTCAATTaGGCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GLLLFAEGYEVTFVN*AVSRLLPDGDDCRR Trigger: TCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTCTGGTTCTTCCCAGATaGCTCCACATCCTGCAACAC | + |
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Preference number: 2 (lower is better) Translates to: CYMGEICHYYKNWLSGLFLVLPR*LHILQH Trigger: GTGTTGCAGGATGTGGAGGCATCTGGGAAGAACCAG...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CCA 72 bp | AAAGGTCCAGCTGTTGCTGTTGACACCCGCACCGACTaGAGGGGACACTTCTCCTGCCTCTGGTTCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: KGPAVAVDTRTD*RGHFSCLWFFP Trigger: TGGGAAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR GCA 72 bp | TCCTGCCTCTGGTTCTTCCCAGATGCCTCCACATCCTaGAACACTTGGCAGTCTAAAACCACTTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SCLWFFPDASTS*NTWQSKTTSSS Trigger: GGAGGAGGAAGTGGTTTTAGACTGCCAAGTGTTGCAGGATGTGGAGGCATCTGGGAAGAACCAGAGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR-3UTR CAA 90 bp | TCAGCCAATATCTGGCACTCGCATACCCGCGGTAGCCACACATACCCAGTGGCCTTTTTCTCCTGGGTCTaGTTACCCTTCTTCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: SANIWHSHTRGSHTYPVAFFSWV*LPFFFF Trigger: GAAAAAGAAGAAGGGTAACAAGACCCAGGAGAAAAA...GGCCACTGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCCAGATATTGGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR-3UTR CAA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTGTGGCTTGTTTCCATTaGAGGACCTCACTGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: KTALSIPLPAEVLARDGSVACFH*RTSLVT Trigger: AGTGACCAGTGAGGTCCTCAAATGGAAACAAGCCAC...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR-3UTR CAA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGAACTGGCTAAGTGGCTaGTTTCCATTTGAGGACCTC | + |
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Preference number: 3 (lower is better) Translates to: VPLSLHFPSILITSAVYLNWLSG*FPFEDL Trigger: GAGGTCCTCAAATGGAAACAAGCCACTTAGCCAGTT...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CCA 72 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTaGCTAAGTGGCTTGTTTCCATTTGAGGACCTCACT | + |
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Preference number: 3 (lower is better) Translates to: CYMGEICHYYKN*LSGLFPFEDLT Trigger: AGTGAGGTCCTCAAATGGAAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGATCCACAGCGCCCACTaGGGCCCGCGACGACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLIHSAH*GPRRRL Trigger: AAGACGTCGTCGCGGGCCTCAGTGGGCGCTGTGGAT...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGATGACGGTACCCACCTaGGCATCCTCTTGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLMTVPT*ASSCTG Trigger: CCCTGTGCAAGAGGATGCTCAGGTGGGTACCGTCAT...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGCACCATTGCAGAAAATaGGGGCCTCTGAGTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLHHCRK*GPLSWD Trigger: GTCCCAACTCAGAGGCCCTCATTTTCTGCAATGGTG...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGTTTGTTCCCTTTCTCTaGACACCGGCGGGTTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLFVPFL*TPAGCR Trigger: ACGACAACCCGCCGGTGTTCAGAGAAAGGGAACAAA...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR GCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGCTGGTTCTTCCCAGATaGCTCCACATCCTGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLLVLPR*LHILQH Trigger: GTGTTGCAGGATGTGGAGGCATCTGGGAAGAACCAG...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTCGCACCGGCTCACGGTaGGCGGCGCTGAGCAACGCA | + |
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Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALRTGSR*AALSNA Trigger: TGCGTTGCTCAGCGCCGCCCACCGTGAGCCGGTGCG...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGTCCAGGACGGTTATTTaGATCTGGACAGACCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: HRAESPTSHWRGWEASPLSRTVI*IWTDPV Trigger: AACAGGGTCTGTCCAGATTCAAATAACCGTCCTGGA...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| 3UTR CAA 72 bp | TTGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTGTaGCTGTTGACACCCGCACCGACTGGAGGGGACACT | + |
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Preference number: 4 (lower is better) Translates to: LGLPGPYLKVQL*LLTPAPTGGDT Trigger: AGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTATCCACAGCGCCCACTaGGGCCCGCGACGACGTCTT | + |
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Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSIHSAH*GPRRRL Trigger: AAGACGTCGTCGCGGGCCTCAGTGGGCGCTGTGGAT...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACCGCACCGGCTCACGGTaGGCGGCGCTGAGCAACGCA | + |
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Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHRTGSR*AALSNA Trigger: TGCGTTGCTCAGCGCCGCCCACCGTGAGCCGGTGCG...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| 3UTR CAA 72 bp | TTGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTGTaGACACCCGCACCGACTGGAGGGGACACTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPGPYLKVQLLL*TPAPTGGDTSP Trigger: AGGAGAAGTGTCCCCTCCAGTCGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 72 bp | TTGTCGGGCAACTCACCGGGACCGGATTGTTTGGGGTaGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSGNSPGPDCLG*PGPYLKVQLLL Trigger: CAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | TCAGCCAATATCTGGCACTCGCATACCCGCGGTAGCCACACATACCCAGTGGCCAACATGAGGTGTCAGTaGGCAGATGACCTGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SANIWHSHTRGSHTYPVANMRCQ*ADDLSI Trigger: AATGGACAGGTCATCTGCTCACTGACACCTCATGTT...GGCCACTGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCCAGATATTGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| 3UTR CAA 72 bp | ATGAATTTGTCGGGCAACTCACCGGGACCGGATTGTTaGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MNLSGNSPGPDC*GLPGPYLKVQL Trigger: CAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTATGACGGTACCCACCTaGGCATCCTCTTGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALMTVPT*ASSCTG Trigger: CCCTGTGCAAGAGGATGCTCAGGTGGGTACCGTCAT...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTAACGCCAGTCAGGGTTaGGCTGTCGTGGTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALNASQG*AVVVHW Trigger: CCAGTGAACCACGACAGCCCAACCCTGACTGGCGTT...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTAACGCCAGTCAGGGTTaGGCTGTCGTGGTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSNASQG*AVVVHW Trigger: CCAGTGAACCACGACAGCCCAACCCTGACTGGCGTT...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR GCA 90 bp | GCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATGACCATGCTGTGACCTaGCATGGAAGGAATCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: AVSRLLPDGDDCRRSWDNDHAVT*HGRNPF Trigger: AAAGGGATTCCTTCCATGGCAGGTCACAGCATGGTC...ATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR GCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTCTTCCACCAGGACCATaGTGTGACCTGCCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSLPPGP*CDLPWK Trigger: CTTCCATGGCAGGTCACAGCATGGTCCTGGTGGAAG...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTGGATCCCGGGCCTCTTaGTCCGATAATCACCATTGC | + |
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Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALGSRAS*SDNHHC Trigger: GCAATGGTGATTATCGGACCAAGAGGCCCGGGATCC...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| 3UTR CAA 72 bp | ATGGAGATGATTGCAGGAGATCCTGGGATAATGAATTaGTCGGGCAACTCACCGGGACCGGATTGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: MEMIAGDPGIMN*SGNSPGPDCLG Trigger: CCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | GCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATAACATGAGGTGTCAGTaGGCAGATGACCTGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: AVSRLLPDGDDCRRSWDNNMRCQ*ADDLSI Trigger: AATGGACAGGTCATCTGCTCACTGACACCTCATGTT...ATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR GCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTAGGGGACACTTCTCCTaGCTCTGGTTCTTCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSRGHFS*LWFFPD Trigger: ATCTGGGAAGAACCAGAGGCAGGAGAAGTGTCCCCT...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | TCAGCCAATATCTGGCACTCGCATACCCGCGGTAGCCACACATACCCAGTGGCCACATTTCTCACTCACTaGCAAAATCATTTTGATCCC | + |
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Preference number: 4 (lower is better) Translates to: SANIWHSHTRGSHTYPVATFLTH*QNHFDP Trigger: GGGATCAAAATGATTTTGCCAGTGAGTGAGAAATGT...GGCCACTGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCCAGATATTGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | TTTGTCAATTTGGCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGAGCACTGGTGTTGCACTaGATACTGTTGGCCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: FVNLAVSRLLPDGDDCRRALVLH*ILLATA Trigger: AGCAGTGGCCAACAGTATCCAGTGCAACACCAGTGC...TCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| 3UTR CAA 72 bp | GATAATGAATTTGTCGGGCAACTCACCGGGACCGGATaGTTTGGGGTTGCCTGGTCCGTATTTAAAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DNEFVGQLTGTG*FGVAWSVFKGP Trigger: TGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTTGCCCGACAAATTCATTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACACCAGGACCATGCTGTaGCCTGCCATGGAAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHTRTML*PAMEGI Trigger: GATTCCTTCCATGGCAGGTCACAGCATGGTCCTGGT...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTCACAGGGAGCGACAGTaGAGTAACCATTACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALHRERQ*SNHYFR Trigger: CCTGAAGTAATGGTTACTTCACTGTCGCTCCCTGTG...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTCACAGGGAGCGACAGTaGAGTAACCATTACTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSHRERQ*SNHYFR Trigger: CCTGAAGTAATGGTTACTTCACTGTCGCTCCCTGTG...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR TCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTTCTTCTCGAGACAGCTaGAGGCTTGGGCTGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLSSRDS*RLGLKA Trigger: GGCCTTCAGCCCAAGCCTTCAGCTGTCTCGAGAAGA...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS-3UTR CCA 90 bp | ATGATTGCAGGAGATCCTGGGATAATGAATTTGTCGGGCAACTCACCGGGACCGGCATCACAGTCATTATaGAGTCGATCCTATTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MIAGDPGIMNLSGNSPGPASQSL*SRSYSV Trigger: CACGGAATAGGATCGACTCCATAATGACTGTGATGC...CGGTCCCGGTGAGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTTCTTCACTCCATCGTTaGCACTGGTGTTGCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQLYPFPCQQKSWHEMALSSLHR*HWCCTG Trigger: TCCAGTGCAACACCAGTGCCAACGATGGAGTGAAGA...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACCACCATTGCAGAAAATaGGGGCCTCTGAGTTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHHHCRK*GPLSWD Trigger: GTCCCAACTCAGAGGCCCTCATTTTCTGCAATGGTG...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACCCCTCTAGAGGAAAATaGGAGTCCAGAGGCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHPSRGK*ESRGAD Trigger: ATCTGCGCCTCTGGACTCTCATTTTCCTCTAGAGGG...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTACCAGGACCATGCTGTaGCCTGCCATGGAAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLTRTML*PAMEGI Trigger: GATTCCTTCCATGGCAGGTCACAGCATGGTCCTGGT...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGTCTTCTCGAGACAGCTaGAGGCTTGGGCTGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLHFPSILITSAVYLSSRDS*RLGLKA Trigger: GGCCTTCAGCCCAAGCCTTCAGCTGTCTCGAGAAGA...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTGGATCCCGGGCCTCTTaGTCCGATAATCACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLGSRAS*SDNHHC Trigger: GCAATGGTGATTATCGGACCAAGAGGCCCGGGATCC...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | CTCTGGTTCTTCCCAGATGCCTCCACATCCTGCAACACTTGGCAGTCTAAAACCGCTGTCGTGGTTCACTaGGAGGATTTAAACAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWFFPDASTSCNTWQSKTAVVVH*EDLNNL Trigger: AAGATTGTTTAAATCCTCCCAGTGAACCACGACAGC...GGTTTTAGACTGCCAAGTGTTGCAGGATGTGGAGGCATCTGGGAAGAACCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTCCCTCTAGAGGAAAATaGGAGTCCAGAGGCGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLPSRGK*ESRGAD Trigger: ATCTGCGCCTCTGGACTCTCATTTTCCTCTAGAGGG...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR GCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACGACCATGCTGTGACCTaGCATGGAAGGAATCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHDHAVT*HGRNPF Trigger: AAAGGGATTCCTTCCATGGCAGGTCACAGCATGGTC...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| 3UTR CAA 72 bp | GTCTCCTCCTTTTTGCCGAAGGTTATGAAGTCACTTTaGTCAATTTGGCTGTTAGTAGGCTCCTGCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSFLPKVMKSL*SIWLLVGSCRM Trigger: CATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTCTCCATCGTTGGCACTaGTGTTGCACTGGATACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLLHRWH*CCTGYC Trigger: ACAGTATCCAGTGCAACACCAGTGCCAACGATGGAG...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| 3UTR CAA 72 bp | CTTTTTGCCGAAGGTTATGAAGTCACTTTTGTCAATTaGGCTGTTAGTAGGCTCCTGCCGGATGGAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LFAEGYEVTFVN*AVSRLLPDGDD Trigger: ATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTCTGGCAAAATCATTTTaGTCCCATAGGAAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSLAKSF*SHRKFL Trigger: GAGAAATTTCCTATGGGATCAAAATGATTTTGCCAG...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTACTCTTGTGTCGTTTTaGACATTTTCAGACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: KTALSIPLPAEVLARDGSTLVSF*TFSDNT Trigger: AGTGTTGTCTGAAAATGTCCAAAACGACACAAGAGT...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTTGCTGTGACCTGCCATaGAAGGAATCCCTTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLCCDLP*KESLYQ Trigger: TTGATAAAGGGATTCCTTCCATGGCAGGTCACAGCA...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACGCTGTCGTGGTTCACTaGGAGGATTTAAACAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHAVVVH*EDLNNL Trigger: AAGATTGTTTAAATCCTCCCAGTGAACCACGACAGC...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGGAAAATGAGGGCCTCTaGGTTGGGACAATCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLHFPSILITSAVYLENEGL*VGTISF Trigger: AAAACTGATTGTCCCAACTCAGAGGCCCTCATTTTC...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTCCATCAGCAATAAATTaGGTTTTGGCGTTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACRYDADFRYNDVTANRLPSAIN*VLAFAL Trigger: GAGAGCAAACGCCAAAACTCAATTTATTGCTGATGG...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTTCCAGGACGGTTATTTaGATCTGGACAGACCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFSRTVI*IWTDPV Trigger: AACAGGGTCTGTCCAGATTCAAATAACCGTCCTGGA...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTGAAAATGAGGGCCTCTaGGTTGGGACAATCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFENEGL*VGTISF Trigger: AAAACTGATTGTCCCAACTCAGAGGCCCTCATTTTC...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGCCATCAGCAATAAATTaGGTTTTGGCGTTTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLHFPSILITSAVYLPSAIN*VLAFAL Trigger: GAGAGCAAACGCCAAAACTCAATTTATTGCTGATGG...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACCTGGCAAAATCATTTTaGTCCCATAGGAAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHLAKSF*SHRKFL Trigger: GAGAAATTTCCTATGGGATCAAAATGATTTTGCCAG...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTGCATCACAGTCATTATaGAGTCGATCCTATTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFASQSL*SRSYSV Trigger: CACGGAATAGGATCGACTCCATAATGACTGTGATGC...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTACACTACTTTATAGCTaGGCTTATCAAACGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFTLLYS*AYQTPD Trigger: GTCCGGCGTTTGATAAGCCCAGCTATAAAGTAGTGT...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTTGCTGTGACCTGCCATaGAAGGAATCCCTTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFCCDLP*KESLYQ Trigger: TTGATAAAGGGATTCCTTCCATGGCAGGTCACAGCA...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTACATCCTGCAACACTTaGCAGTCTAAAACCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFTSCNT*QSKTTS Trigger: GGAAGTGGTTTTAGACTGCCAAGTGTTGCAGGATGT...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGTTGAGTTTTGGCGTTTaGTCTCTGTCCAATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLHFPSILITSAVYLLSFGV*SLSNNF Trigger: GAAGTTATTGGACAGAGAGCAAACGCCAAAACTCAA...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTTAAGTTTACACTTCCCCTCCATACTGATAACTTCCGCTGTTTATTTGTCGGAAGCATTTAGTTaGATCACTCTTGTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLHFPSILITSAVYLSEAFS*ITLVSF Trigger: AAACGACACAAGAGTGATCCAACTAAATGCTTCCGA...CAAATAAACAGCGGAAGTTATCAGTATGGAGGGGAAGTGTAAACTTAAAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR GCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTTTGAGTTTTGGCGTTTaGTCTCTGTCCAATAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFLSFGV*SLSNNF Trigger: GAAGTTATTGGACAGAGAGCAAACGCCAAAACTCAA...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CCA 90 bp | TGCTACATGGGAGAGATTTGCCATTATTACAAAAACTGGCTAAGTGGCTTGTTTTCGGAAGCATTTAGTTaGATCACTCTTGTGTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CYMGEICHYYKNWLSGLFSEAFS*ITLVSF Trigger: AAACGACACAAGAGTGATCCAACTAAATGCTTCCGA...AAACAAGCCACTTAGCCAGTTTTTGTAATAATGGCAAATCTCTCCCATGTAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGTCAAACGCCGGACCATaGTCATTCACATCCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: HRAESPTSHWRGWEASPLSNAGP*SFTSRT Trigger: CGTCCTGGATGTGAATGACAATGGTCCGGCGTTTGA...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGATGAGGGCCTCTGAGTaGGGACAATCAGTTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HRAESPTSHWRGWEASPLMRASE*GQSVLR Trigger: CCTTAAAACTGATTGTCCCAACTCAGAGGCCCTCAT...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGATCCAGGACGGTTATTaGAATCTGGACAGACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRAESPTSHWRGWEASPLIQDGY*NLDRPC Trigger: ACAGGGTCTGTCCAGATTCAAATAACCGTCCTGGAT...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTGCCGACCGCCGCCGGTaGCAACTCGTAGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KQLYPFPCQQKSWHEMALADRRR*QLVGQP Trigger: TGGCTGTCCTACGAGTTGCAACCGGCGGCGGTCGGC...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAATATCTGGCACTCGCATACCCGCGGTAGCCACACATACCCAGTGGCCATCCAGGACGGTTATTaGAATCTGGACAGACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SANIWHSHTRGSHTYPVAIQDGY*NLDRPC Trigger: ACAGGGTCTGTCCAGATTCAAATAACCGTCCTGGAT...GGCCACTGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCCAGATATTGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTTGCACTCTTGTGTCGTTTaGGACATTTTCAGACAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HRAESPTSHWRGWEASPLHSCVV*DIFRQH Trigger: GTGTTGTCTGAAAATGTCCAAAACGACACAAGAGTG...CAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTGCCGACCGCCGCCGGTaGCAACTCGTAGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACRYDADFRYNDVTANRLADRRR*QLVGQP Trigger: TGGCTGTCCTACGAGTTGCAACCGGCGGCGGTCGGC...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | GCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATGTTTTAAGGGATCGCTaGCCTGAGGTATTTTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVSRLLPDGDDCRRSWDNVLRDR*PEVFYE Trigger: CTCATAAAATACCTCAGGCAAGCGATCCCTTAAAAC...ATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | TGTGTTGGTAACAAGTTTTACCCCATGCAATCCTGCAGAGCTGAAGTTACACACTCAAACGCCGGACCATaGTCATTCACATCCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CVGNKFYPMQSCRAEVTHSNAGP*SFTSRT Trigger: CGTCCTGGATGTGAATGACAATGGTCCGGCGTTTGA...GTGTGTAACTTCAGCTCTGCAGGATTGCATGGGGTAAAACTTGTTACCAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | GCTGTTAGTAGGCTCCTGCCGGATGGAGATGATTGCAGGAGATCCTGGGATAATCACTCTTGTGTCGTTTaGGACATTTTCAGACAACAC | + |
|
Preference number: 5 (lower is better) Translates to: AVSRLLPDGDDCRRSWDNHSCVV*DIFRQH Trigger: GTGTTGTCTGAAAATGTCCAAAACGACACAAGAGTG...ATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTGTTTTAAGGGATCGCTaGCCTGAGGTATTTTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KQLYPFPCQQKSWHEMALVLRDR*PEVFYE Trigger: CTCATAAAATACCTCAGGCAAGCGATCCCTTAAAAC...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTATGAGGGCCTCTGAGTaGGGACAATCAGTTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACRYDADFRYNDVTANRLMRASE*GQSVLR Trigger: CCTTAAAACTGATTGTCCCAACTCAGAGGCCCTCAT...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | AAAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTACCATCAGCAATAAATaGAGTTTTGGCGTTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KTALSIPLPAEVLARDGSTISNK*SFGVCS Trigger: AGAGCAAACGCCAAAACTCAATTTATTGCTGATGGT...AGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
||
| CDS-3UTR CAA 90 bp | AAACAGCTTTATCCATTCCCTTGCCAGCAGAAGTCTTGGCACGAGATGGCTCTTTTAGTTGGATCACTCTaGTGTCGTTTTGGACATTTT | + |
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Preference number: 5 (lower is better) Translates to: KQLYPFPCQQKSWHEMALLVGSL*CRFGHF Trigger: AAAATGTCCAAAACGACACAAGAGTGATCCAACTAA...AAGAGCCATCTCGTGCCAAGACTTCTGCTGGCAAGGGAATGGATAAAGCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS CCA 90 bp | GAAATTTCTCCATTAAGTCCTTCGTCTGGATCGGAAGCATTTAGTTaGATCACTCTTGTGTCGTTTTGGACATTTTCAGACAACACTACT | + |
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Preference number: 5 (lower is better) Translates to: EISPLSPSSGSEAFS*ITLVSFWTFSDNTT Trigger: AGTAGTGTTGTCTGAAAATGTCCAAAACGACACAAGAGTGATCCAACTAAATGCTTCCGATCCAGACGAAGGACTTAATGGAGAAATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS-3UTR CAA 90 bp | GCTTGCAGGTATGATGCAGATTTTAGGTATAATGACGTCACAGCCAACAGACTTTTAGTTGGATCACTCTaGTGTCGTTTTGGACATTTT | + |
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Preference number: 5 (lower is better) Translates to: ACRYDADFRYNDVTANRLLVGSL*CRFGHF Trigger: AAAATGTCCAAAACGACACAAGAGTGATCCAACTAA...AAGTCTGTTGGCTGTGACGTCATTATACCTAAAATCTGCATCATACCTGCAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS GCA 90 bp | TTACCGCCATCGATTACCATCAGCAATAAATTGAGTTTTGGCGTTTaGTCTCTGTCCAATAACTTCCGAAGAACTAATTCAGGCAATATA | + |
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Preference number: 5 (lower is better) Translates to: LPPSITISNKLSFGV*SLSNNFRRTNSGNI Trigger: TATATTGCCTGAATTAGTTCTTCGGAAGTTATTGGACAGAGAGCAAACGCCAAAACTCAATTTATTGCTGATGGTAATCGATGGCGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGTTCACTGGGAGGATTTAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVVHWEDLNN Trigger: ATTGTTTAAATCCTCCCAGTGAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398631.3 ENST00000673403.1 |
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| CDS GCA 72 bp | CACGTCCAGAACTTCCACCAGGACCATGCTGTGACCTaGCATGGAAGGAATCCCTTTATCAATGGCGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: HVQNFHQDHAVT*HGRNPFINGVN Trigger: GTTAACGCCATTGATAAAGGGATTCCTTCCATGGCAGGTCACAGCATGGTCCTGGTGGAAGTTCTGGACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS TCA 72 bp | ACCCACCTGAGCATCCTCTTGCACAGGGAGCGACAGTaGAGTAACCATTACTTCAGGGACATTGTCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: THLSILLHRERQ*SNHYFRDIVIH Trigger: GTGAATGACAATGTCCCTGAAGTAATGGTTACTTCACTGTCGCTCCCTGTGCAAGAGGATGCTCAGGTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS TCA 72 bp | GGTCCGATAATCACCATTGCAGAAAATGAGGGCCTCTaGGTTGGGACAATCAGTTTTAAGGGATCGCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GPIITIAENEGL*VGTISFKGSLA Trigger: GGCAAGCGATCCCTTAAAACTGATTGTCCCAACTCAGAGGCCCTCATTTTCTGCAATGGTGATTATCGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS CCA 72 bp | CGTTTTGGACATTTTCAGACAACACTACTTTATAGCTaGGCTTATCAAACGCCGGACCATTGTCATTCACAT | + |
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Preference number: 6 (lower is better) Translates to: RFGHFQTTLLYS*AYQTPDHCHSH Trigger: ATGTGAATGACAATGGTCCGGCGTTTGATAAGCCCAGCTATAAAGTAGTGTTGTCTGAAAATGTCCAAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS CAA 72 bp | CTTCGTCTGGATCGGAAGCATTTAGTTGGATCACTCTaGTGTCGTTTTGGACATTTTCAGACAACACTACTT | + |
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Preference number: 6 (lower is better) Translates to: LRLDRKHLVGSL*CRFGHFQTTLL Trigger: AAGTAGTGTTGTCTGAAAATGTCCAAAACGACACAAGAGTGATCCAACTAAATGCTTCCGATCCAGACGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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| CDS GCA 72 bp | TCGATTACCATCAGCAATAAATTGAGTTTTGGCGTTTaGTCTCTGTCCAATAACTTCCGAAGAACTAATTCA | + |
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Preference number: 6 (lower is better) Translates to: SITISNKLSFGV*SLSNNFRRTNS Trigger: TGAATTAGTTCTTCGGAAGTTATTGGACAGAGAGCAAACGCCAAAACTCAATTTATTGCTGATGGTAATCGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000398631.3 ENST00000613593.1 ENST00000673403.1 |
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