Pregenerated sensors for PCDHA11 (Homo sapiens)
Ensembl gene IDs: ENSG00000249158Ensembl transcript IDs: ENST00000398640.7, ENST00000616325.1, ENST00000617408.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCACACCAGCGCAGCCTCTaGGCTCGCGGCGCCCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CPASVIKTGSPEHRAESPHQRSL*ARGARQ Trigger: TTGGCGGGCGCCGCGAGCCCAGAGGCTGCGCTGGTG...TGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | CCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCATGACCGTGCTGGGCTaGGCGTCCTCTCGTACTGGG | + |
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Preference number: 4 (lower is better) Translates to: PALQVSSRQDPRSTGQRVMTVLG*ASSRTG Trigger: CCCAGTACGAGAGGACGCTCAGCCCAGCACGGTCAT...GACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | CCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAACCGTGGCTGTCCGGGGTaGTTTGACCCTGGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PCKCHQDRIPGAQGRESNRGCPG*FDPGSC Trigger: ACAGGAGCCAGGGTCAAATCACCCCGGACAGCCACG...GTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000617408.1 |
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| CDS-3UTR CCA 90 bp | CCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAACCAACGCCAGTCAGGGTTaGGCTGTCGTGGCTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: PASVIKTGSPEHRAESPTNASQG*AVVAVR Trigger: CCGGACAGCCACGACAGCCCAACCCTGACTGGCGTT...GGTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000617408.1 |
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| CDS-3UTR TCA 90 bp | CCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCACCCAGACTGTACAGTaGCCTGCCATTGGGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PALQVSSRQDPRSTGQRVTQTVQ*PAIGGV Trigger: GACTCCCCCAATGGCAGGTCACTGTACAGTCTGGGT...GACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | CTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAACCTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LQVSSRQDPRSTGQRVQPNASQG*AVVAVR Trigger: CCGGACAGCCACGACAGCCCAACCCTGACTGGCGTT...AGGTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000617408.1 |
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| CDS-3UTR TCA 90 bp | TGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAGCAGCTTTTGTTCTCTaGGCGAGAACACCGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: CPASVIKTGSPEHRAESPAAFVL*ARTPAG Trigger: ACCCGCCGGTGTTCTCGCTCAGAGAACAAAAGCTGC...TGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | CCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCGGTGCCAGTAAGCTCTaGTTTTCCCCCGTCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PALQVSSRQDPRSTGQRVGASKL*FSPVCS Trigger: GCTACAGACGGGGGAAAACCAGAGCTTACTGGCACC...GACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR GCA 90 bp | AACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGACTGTACAGTGACCTaGCATTGGGGGAGTCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: NFSACPASVIKTGSPEHRDCTVT*HWGSPL Trigger: AAGGGGACTCCCCCAATGGCAGGTCACTGTACAGTC...CCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGGCTGAAAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | CCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAACCCCCAATCCCCTTCTCTaGAAACCAAACATCGCATAC | + |
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Preference number: 4 (lower is better) Translates to: PASVIKTGSPEHRAESPTPNPLL*KPNIAY Trigger: GTATGCGATGTTTGGTTTTCAGAGAAGGGGATTGGG...GGTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | GCCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCTGGATCATTGTCGTTaGCATCCAAGACTTGGACTA | + |
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Preference number: 4 (lower is better) Translates to: ACPASVIKTGSPEHRAESLDHCR*HPRLGL Trigger: TAGTCCAAGTCTTGGATGTCAACGACAATGATCCAG...ACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | AACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCCGTGGCTGTCCGGGGTaGTTTGACCCTGGCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: NSQAAQSQNFSACPASVIRGCPG*FDPGSC Trigger: ACAGGAGCCAGGGTCAAATCACCCCGGACAGCCACG...GATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000617408.1 |
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| CDS-3UTR GCA 90 bp | CTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCAACCTAAACGCGAGTCCGATTaGTTAGATTCCGCAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: LQVSSRQDPRSTGQRVQPKRESD*LDSAIS Trigger: GCTGATTGCGGAATCTAAGCAATCGGACTCGCGTTT...AGGTTGGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | GCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGACAGGAAGTACTAGAAGTCGGTaGCGCGGCGAGTCTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: AAQSQNFSACPASVIKTGSTRSR*RGESAS Trigger: CGAGGCAGACTCGCCGCGCCACCGACTTCTAGTACT...TCCTGTCTTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | CCACAAACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGAGCGTCCTCTCGTACTaGGAGGGACAAGGAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PQTPKLLNLKTFQPALQVSVLSY*EGQGSH Trigger: GTGACTTCCTTGTCCCTCCCAGTACGAGAGGACGCT...CACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | GCCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTGCTCACCTTATATTCTaGTTTATCAAACTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ACPASVIKTGSPEHRAESAHLIF*FIKLWI Trigger: GATCCAGAGTTTGATAAATCAGAATATAAGGTGAGC...ACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR GCA 90 bp | CCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGAGCTGTAGTCGTGGGGTaGCCAATCCCCTTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PKLLNLKTFQPALQVSSRAVVVG*PIPFSE Trigger: TTCAGAGAAGGGGATTGGGCACCCCACGACTACAGC...TCTTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR GCA 90 bp | CTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCCGACAGTCTTTTAATCTaGTTACCATTTGTTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPCKCHQDRIPGAQGRESDSLLI*LPFVGE Trigger: TTCACCAACAAATGGTAAGCAGATTAAAAGACTGTC...GGACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | AACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCACAGTGACCTGCCATTaGGGGAGTCCCCTTATCTGT | + |
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Preference number: 4 (lower is better) Translates to: NSQAAQSQNFSACPASVITVTCH*GSPLIC Trigger: ACAGATAAGGGGACTCCCCCAATGGCAGGTCACTGT...GATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR TCA 90 bp | GCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGACAGGATCCATGTTACCTCTCCATTaGCTCCTTCGTCTCGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AQSQNFSACPASVIKTGSMLPLH*LLRLGL Trigger: CAGACCGAGACGAAGGAGTCAATGGAGAGGTAACAT...GGATCCTGTCTTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CCA 90 bp | AACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCTTGACATCCAAGACTTaGACTAACAGCCGAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: NSQAAQSQNFSACPASVILTSKT*TNSRTV Trigger: CACCGTTCGGCTGTTAGTCCAAGTCTTGGATGTCAA...GATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCAAAACGCGAGTCCGATaGCTTAGATTCCGCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: PALQVSSRQDPRSTGQRVKTRVR*LRFRNQ Trigger: CTGATTGCGGAATCTAAGCAATCGGACTCGCGTTTT...GACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCCTGCAAGTGTCATCAAGACAGGATCCCCGGAGCACAGGGCAGAGAGTCACATCGCATACGAAATaGGCTTCCAAAATAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PALQVSSRQDPRSTGQRVTSHTK*ASKISF Trigger: GAAGCTTATTTTGGAAGCCAATTTCGTATGCGATGT...GACTCTCTGCCCTGTGCTCCGGGGATCCTGTCTTGATGACACTTGCAGGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | AACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCTACAGTGACCTGCCATaGGGGGAGTCCCCTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: NSQAAQSQNFSACPASVIYSDLP*GESPYL Trigger: CAGATAAGGGGACTCCCCCAATGGCAGGTCACTGTA...GATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | CTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAACGCAATCAGCAGCTTTaGTTCTCTGAGCGAGAACAC | + |
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Preference number: 5 (lower is better) Translates to: LPSCSISKLFSLPCKCHQRNQQL*FSEREH Trigger: GTGTTCTCGCTCAGAGAACAAAAGCTGCTGATTGCG...TTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | AACTCCCAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCTCAGGAGAGTTATCGTaGGTGTCCAAGATTTCCACC | + |
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Preference number: 5 (lower is better) Translates to: NSQAAQSQNFSACPASVISGELS*VSKIST Trigger: GGTGGAAATCTTGGACACCAACGATAACTCTCCTGA...GATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTGGGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | GCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGACAGGATCCTCTGGATCATTGTCGTaGACATCCAAGACTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: AQSQNFSACPASVIKTGSSGSLS*TSKTWT Trigger: AGTCCAAGTCTTGGATGTCAACGACAATGATCCAGA...GGATCCTGTCTTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS-3UTR CAA 90 bp | CAAGCTGCTCAATCTCAAAACTTTTCAGCCTGCCCTGCAAGTGTCATCAAGACATATGTTACCTCTCCATaGACTCCTTCGTCTCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QAAQSQNFSACPASVIKTYVTSP*TPSSRS Trigger: AGACCGAGACGAAGGAGTCAATGGAGAGGTAACATA...TGTCTTGATGACACTTGCAGGGCAGGCTGAAAAGTTTTGAGATTGAGCAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398640.7 |
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| CDS TCA 90 bp | GTTCCTTTGTATGGGAGTGCCTCACTGTTCAGACCAACCTTTAAATaGACTTTCCACCAAGTAAAGAGCGACACCTTGCGCCTAAAACTG | + |
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Preference number: 5 (lower is better) Translates to: VPLYGSASLFRPTFK*TFHQVKSDTLRLKL Trigger: CAGTTTTAGGCGCAAGGTGTCGCTCTTTACTTGGTGGAAAGTTCATTTAAAGGTTGGTCTGAACAGTGAGGCACTCCCATACAAAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS TCA 90 bp | ATTCTTAAGAAGTTTCAAAGGATCCTTAAACGGTGGCATCCGGTATaGTGGAGTTCCTTTGTATGGGAGTGCCTCACTGTTCAGACCAAC | + |
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Preference number: 5 (lower is better) Translates to: ILKKFQRILKRWHPV*WSSFVWECLTVQTN Trigger: GTTGGTCTGAACAGTGAGGCACTCCCATACAAAGGAACTCCATCATACCGGATGCCACCGTTTAAGGATCCTTTGAAACTTCTTAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS CCA 72 bp | CTGCTCTCAGGGAGGCAGAGTAACGCCAGTCAGGGTTaGGCTGTCGTGGCTGTCCGGGGTGATTTGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLSGRQSNASQG*AVVAVRGDLTL Trigger: CAGGGTCAAATCACCCCGGACAGCCACGACAGCCCAACCCTGACTGGCGTTACTCTGCCTCCCTGAGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000617408.1 |
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| CDS CAA 72 bp | GGAAGCCTCTCCTTTGCGGCGGAGGAGAAAGGAAACTaGGGTCTGCTTTTTAGGTTCGGGACCGGATTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GSLSFAAEEKGN*GLLFRFGTGLF Trigger: AAACAATCCGGTCCCGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617408.1 |
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| CDS CAA 72 bp | GTCTGCTTTTTAGGTTCGGGACCGGATTGTTTGGGGTaGCCTGGTCCGTATTTAAAGGTCCAGCTGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VCFLGSGPDCLG*PGPYLKVQLLL Trigger: CAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGAACCTAAAAAGCAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617408.1 |
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| CDS CAA 72 bp | ACTTGGGTCTGCTTTTTAGGTTCGGGACCGGATTGTTaGGGGTTGCCTGGTCCGTATTTAAAGGTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TWVCFLGSGPDC*GLPGPYLKVQL Trigger: CAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGAACCTAAAAAGCAGACCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617408.1 |
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| CDS CAA 72 bp | TCCTTAAACGGTGGCATCCGGTATGATGGAGTTCCTTaGTATGGGAGTGCCTCACTGTTCAGACCAACCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLNGGIRYDGVP*YGSASLFRPTF Trigger: AAAGGTTGGTCTGAACAGTGAGGCACTCCCATACAAAGGAACTCCATCATACCGGATGCCACCGTTTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS TCA 72 bp | TATGGGAGTGCCTCACTGTTCAGACCAACCTTTAAATaGACTTTCCACCAAGTAAAGAGCGACACCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: YGSASLFRPTFK*TFHQVKSDTLR Trigger: GCGCAAGGTGTCGCTCTTTACTTGGTGGAAAGTTCATTTAAAGGTTGGTCTGAACAGTGAGGCACTCCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS TCA 72 bp | CACCAAGTAAAGAGCGACACCTTGCGCCTAAAACTGTaGGTACTGTGCACTGCATTTACCACCACAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: HQVKSDTLRLKL*VLCTAFTTTEF Trigger: AAATTCTGTGGTGGTAAATGCAGTGCACAGTACTCACAGTTTTAGGCGCAAGGTGTCGCTCTTTACTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS TCA 72 bp | AAGTTTCAAAGGATCCTTAAACGGTGGCATCCGGTATaGTGGAGTTCCTTTGTATGGGAGTGCCTCACTGTT | + |
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Preference number: 6 (lower is better) Translates to: KFQRILKRWHPV*WSSFVWECLTV Trigger: AACAGTGAGGCACTCCCATACAAAGGAACTCCATCATACCGGATGCCACCGTTTAAGGATCCTTTGAAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000616325.1 |
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| CDS CAA 90 bp | CTTCCATTGGGCTTAATTGACATTAAGGAGTATGTTACCTCTCCATaGACTCCTTCGTCTCGGTCTGTGGCGTTTAGTTTGAGCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPLGLIDIKEYVTSP*TPSSRSVAFSLSTR Trigger: TCTTGTGCTCAAACTAAACGCCACAGACCGAGACGAAGGAGTCAATGGAGAGGTAACATACTCCTTAATGTCAATTAAGCCCAATGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000398640.7 ENST00000616325.1 |
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