RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH9 (Homo sapiens)

Ensembl gene IDs: ENSG00000184226

Ensembl transcript IDs: ENST00000377861.4, ENST00000377865.7, ENST00000456367.5, ENST00000544246.5, ENST00000614931.1, ENST00000617020.1

Found 1114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGAAGAGGGTGTGAGATCAGGGTTCCACTACCCACCGGCTCATaGTCTCCTAGACCACTGTCACTGCAGCTTTCCTGGGAGCCATCA +
Preference number: 1 (lower is better)
Translates to: RGRGCEIRVPLPTGS*SPRPLSLQLSWEPS
Trigger: TGATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR GCA 90 bp TCGGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTaGTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTC +
Preference number: 1 (lower is better)
Translates to: SGTQRPIRVGIRVAI*FSPLVRRGLVIEFV
Trigger: GACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR GCA 90 bp GGAGGAGGGCCTATACTGATCTTAGCTGGCAAATTTGTGCAGAGATaGCTGGTGGTTGCTTCTGAACCATTCAGGCACAGGGGCTGGAAT +
Preference number: 1 (lower is better)
Translates to: GGGPILILAGKFVQR*LVVASEPFRHRGWN
Trigger: ATTCCAGCCCCTGTGCCTGAATGGTTCAGAAGCAACCACCAGGCATCTCTGCACAAATTTGCCAGCTAAGATCAGTATAGGCCCTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp AGACCAAAAGATCATCAGGAACCAGGGCCATGTGAGGAACAATCCTaGAATACGCCTGGGTTCACACAGTATCAGCTGGAGAGGATGCAC +
Preference number: 1 (lower is better)
Translates to: RPKDHQEPGPCEEQS*NTPGFTQYQLERMH
Trigger: GTGCATCCTCTCCAGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATTGTTCCTCACATGGCCCTGGTTCCTGATGATCTTTTGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp CCTAGACCACTGTCACTGCAGCTTTCCTGGGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGCGAATTTGTGGCTCATATTACAATT +
Preference number: 1 (lower is better)
Translates to: PRPLSLQLSWEPSGR*NVTRRCEFVAHITI
Trigger: AATTGTAATATGAGCCACAAATTCGCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR CCA 90 bp GTGAGGAACAATCCTGAAATACGCCTGGGTTCACACAGTATCAGCTaGAGAGGATGCACAGTCCCTGCAAATAACAGATGGTCCTGCAAG +
Preference number: 1 (lower is better)
Translates to: VRNNPEIRLGSHSIS*RGCTVPANNRWSCK
Trigger: CTTGCAGGACCATCTGTTATTTGCAGGGACTGTGCATCCTCTCCAGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATTGTTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp CACAGTATCAGCTGGAGAGGATGCACAGTCCCTGCAAATAACAGATaGTCCTGCAAGAATAGTTTAAACCCTGAGGAGTGTTGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: HSISWRGCTVPANNR*SCKNSLNPEECCSQ
Trigger: CTGGGAGCAACACTCCTCAGGGTTTAAACTATTCTTGCAGGACCATCTGTTATTTGCAGGGACTGTGCATCCTCTCCAGCTGATACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp TCTCCTTGCTACTGCGGGATTGGCACCTGGCCAGCACAAGCGACATaGTACCCTAGTGCCATCTACAGGCTATTATCGATATTCAAATTT +
Preference number: 1 (lower is better)
Translates to: SPCYCGIGTWPAQAT*YPSAIYRLLSIFKF
Trigger: AAATTTGAATATCGATAATAGCCTGTAGATGGCACTAGGGTATCATGTCGCTTGTGCTGGCCAGGTGCCAATCCCGCAGTAGCAAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp GAGTTGCCATTTGAGACCAAAAGATCATCAGGAACCAGGGCCATGTaGGGAACAATCCTGAAATACGCCTGGGTTCACACAGTATCAGCT +
Preference number: 1 (lower is better)
Translates to: ELPFETKRSSGTRAM*GTILKYAWVHTVSA
Trigger: AGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATTGTTCCTCACATGGCCCTGGTTCCTGATGATCTTTTGGTCTCAAATGGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp ATACAGACATCTGACTTGGCCCTGAAACCCTGTAAACACCCAGACTaGTATAGTGGGACCAAGGCTACAACTGTAACGTTCAGCATTTGG +
Preference number: 1 (lower is better)
Translates to: IQTSDLALKPCKHPD*YSGTKATTVTFSIW
Trigger: CCAAATGCTGAACGTTACAGTTGTAGCCTTGGTCCCACTATACCAGTCTGGGTGTTTACAGGGTTTCAGGGCCAAGTCAGATGTCTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp AATCCTGAAATACGCCTGGGTTCACACAGTATCAGCTGGAGAGGATaGACAGTCCCTGCAAATAACAGATGGTCCTGCAAGAATAGTTTA +
Preference number: 1 (lower is better)
Translates to: NPEIRLGSHSISWRG*TVPANNRWSCKNSL
Trigger: TAAACTATTCTTGCAGGACCATCTGTTATTTGCAGGGACTGTGCATCCTCTCCAGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp GCTACAATAAAACAGCTGTCAATAAGTGGGCTGAGAGTTGGGCTGTaGAAAAACAGGTTCTCTGGATATGATAATACGAGAGGGAAAGAG +
Preference number: 1 (lower is better)
Translates to: ATIKQLSISGLRVGL*KNRFSGYDNTRGKE
Trigger: CTCTTTCCCTCTCGTATTATCATATCCAGAGAACCTGTTTTTGCACAGCCCAACTCTCAGCCCACTTATTGACAGCTGTTTTATTGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp GCACCACATGTCAAGCACCCAGTCAATCTCTATAACTCACCAAGTTaGCTCTTATTGGTCAGAATGAAAAGCATATACACCTTCTGCAAG +
Preference number: 1 (lower is better)
Translates to: APHVKHPVNLYNSPS*LLLVRMKSIYTFCK
Trigger: CTTGCAGAAGGTGTATATGCTTTTCATTCTGACCAATAAGAGGCAACTTGGTGAGTTATAGAGATTGACTGGGTGCTTGACATGTGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp TTAGCTGGTTTGATTACACCATGGATGCCATTACTTCAACAGGGATaGTTTCCAGTCTATGGAATAATTGGAAGCAAGAACCAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: LAGLITPWMPLLQQG*FPVYGIIGSKNQQV
Trigger: AACCTGCTGGTTCTTGCTTCCAATTATTCCATAGACTGGAAAGCATCCCTGTTGAAGTAATGGCATCCATGGTGTAATCAAACCAGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp TTCACACTGTATTGTCCCTGGAATGCTCACTCTGACAATGCTCTATaGACTCACAGAATTTTCTTTATCTGTCCATCTTCTAACCTTGCC +
Preference number: 1 (lower is better)
Translates to: FTLYCPWNAHSDNAL*THRIFFICPSSNLA
Trigger: GGCAAGGTTAGAAGATGGACAGATAAAGAAAATTCTGTGAGTTCATAGAGCATTGTCAGAGTGAGCATTCCAGGGACAATACAGTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp TTTCCAATGCTCAGACTATTTAATTTGGCTCTTGTAATGTCCATTTaGATCCAGTCTGCCTGCCTGTCACAATCACAACCAATAGGCATA +
Preference number: 1 (lower is better)
Translates to: FPMLRLFNLALVMSI*IQSACLSQSQPIGI
Trigger: TATGCCTATTGGTTGTGATTGTGACAGGCAGGCAGACTGGATCCAAATGGACATTACAAGAGCCAAATTAAATAGTCTGAGCATTGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp GTTATAGGTATCCCTGCTAGAAGGGGCATAGTTGTAGAGATCTATTaGATACATAAAGCTCTGACGCACACGGTATTAGCATGTCTATTT +
Preference number: 1 (lower is better)
Translates to: VIGIPARRGIVVEIY*IHKALTHTVLACLF
Trigger: AAATAGACATGCTAATACCGTGTGCGTCAGAGCTTTATGTATTCAATAGATCTCTACAACTATGCCCCTTCTAGCAGGGATACCTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR CCA 90 bp TGCTCTTCTATTAGGGAAACACTCATACCTTCCCCTGAAAAACACTaGAGTATTGTTCTGAAAGCCAACACAATGTATTACAAGAGCAGA +
Preference number: 1 (lower is better)
Translates to: CSSIRETLIPSPEKH*SIVLKANTMYYKSR
Trigger: TCTGCTCTTGTAATACATTGTGTTGGCTTTCAGAACAATACTCCAGTGTTTTTCAGGGGAAGGTATGAGTGTTTCCCTAATAGAAGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp ACCCTAAGAGGTCTGATATTCAAGATAATATCCACACTATGTCCCTaGCCTGTTTGGTATCCCAATGCTATAAAATGGATATCACATCTT +
Preference number: 1 (lower is better)
Translates to: TLRGLIFKIISTLCP*PVWYPNAIKWISHL
Trigger: AAGATGTGATATCCATTTTATAGCATTGGGATACCAAACAGGGCAGGGACATAGTGTGGATATTATCTTGAATATCAGACCTCTTAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp CTATTTAATTTGGCTCTTGTAATGTCCATTTGGATCCAGTCTGCCTaGCTGTCACAATCACAACCAATAGGCATAATGTCACTACAAATT +
Preference number: 1 (lower is better)
Translates to: LFNLALVMSIWIQSA*LSQSQPIGIMSLQI
Trigger: AATTTGTAGTGACATTATGCCTATTGGTTGTGATTGTGACAGGCAGGCAGACTGGATCCAAATGGACATTACAAGAGCCAAATTAAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 90 bp TTATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATaGAGGCACAACACATTAAATATTTTGTGGCTATGGTCTAATAAC +
Preference number: 1 (lower is better)
Translates to: LFPPTTLPGECSVTS*RHNTLNILWLWSNN
Trigger: GTTATTAGACCATAGCCACAAAATATTTAATGTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR TCA 90 bp ATCAGATGTATTAACAACATACATGAATATAGTCCACCTAGTGAATaGCAAGAAATGGAGCAAAGAAAAGTAGCCAGTCCAGGTGTGTTC +
Preference number: 1 (lower is better)
Translates to: IRCINNIHEYSPPSE*QEMEQRKVASPGVF
Trigger: GAACACACCTGGACTGGCTACTTTTCTTTGCTCCATTTCTTGTCATTCACTAGGTGGACTATATTCATGTATGTTGTTAATACATCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp AATTTCAAGATCACTGATCTTCAGGTTGCATCAAAATTTACTGAATaGCTACTAAGTTCACTCTTTTCAGCACTGTTGTGGGTTCAGTGT +
Preference number: 1 (lower is better)
Translates to: NFKITDLQVASKFTE*LLSSLFSALLWVQC
Trigger: ACACTGAACCCACAACAGTGCTGAAAAGAGTGAACTTAGTAGGCATTCAGTAAATTTTGATGCAACCTGAAGATCAGTGATCTTGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp AAGTATTATATATCTTTCCTACCTCTCAGTATTGGCTACAACATCTaGTCTTCTATTAGGGAAACACTCATACCTTCCCCTGAAAAACAC +
Preference number: 1 (lower is better)
Translates to: KYYISFLPLSIGYNI*SSIRETLIPSPEKH
Trigger: GTGTTTTTCAGGGGAAGGTATGAGTGTTTCCCTAATAGAAGAGCAGATGTTGTAGCCAATACTGAGAGGTAGGAAAGATATATAATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp AAATCAAGAAAGCATTCACTAAATGAATGTGCAAACATCTGTCAATaGCAAGCTGGTATTCTTGGACAGGAGGTAGAAAAACAGGTAACA +
Preference number: 1 (lower is better)
Translates to: KSRKHSLNECANICQ*QAGILGQEVEKQVT
Trigger: TGTTACCTGTTTTTCTACCTCCTGTCCAAGAATACCAGCTTGCCATTGACAGATGTTTGCACATTCATTTAGTGAATGCTTTCTTGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 90 bp GATGGCATTCATCTGGAGGTGAATCCCAAATTTCTATCACTGGCATaGTTATTTCCGACTAAAATAAATATTCTCAGAATGAAAGCTGAA +
Preference number: 1 (lower is better)
Translates to: DGIHLEVNPKFLSLA*LFPTKINILRMKAE
Trigger: TTCAGCTTTCATTCTGAGAATATTTATTTTAGTCGGAAATAAGCATGCCAGTGATAGAAATTTGGGATTCACCTCCAGATGAATGCCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp AATCAATCTCAGAAATATGATCCATATACTTTGAGGCATTTTAGCTaGTTTGATTACACCATGGATGCCATTACTTCAACAGGGATGCTT +
Preference number: 1 (lower is better)
Translates to: NQSQKYDPYTLRHFS*FDYTMDAITSTGML
Trigger: AAGCATCCCTGTTGAAGTAATGGCATCCATGGTGTAATCAAACCAGCTAAAATGCCTCAAAGTATATGGATCATATTTCTGAGATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp GGTCTGATATTCAAGATAATATCCACACTATGTCCCTGCCCTGTTTaGTATCCCAATGCTATAAAATGGATATCACATCTTAGCATAAAA +
Preference number: 1 (lower is better)
Translates to: GLIFKIISTLCPCPV*YPNAIKWISHLSIK
Trigger: TTTTATGCTAAGATGTGATATCCATTTTATAGCATTGGGATACCAAACAGGGCAGGGACATAGTGTGGATATTATCTTGAATATCAGACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 90 bp GATTTTCTAAAATCTATGTGTTCCTTATTTATAAACAAGTACAGATaGGCCATCACCATAGGTGAACTCCATATCGACAAAGACAGAACT +
Preference number: 1 (lower is better)
Translates to: DFLKSMCSLFINKYR*AITIGELHIDKDRT
Trigger: AGTTCTGTCTTTGTCGATATGGAGTTCACCTATGGTGATGGCCCATCTGTACTTGTTTATAAATAAGGAACACATAGATTTTAGAAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp GGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: GTQRPIRVGIRVAICFSPEPSGR*NVTRRC
Trigger: GCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTC...AGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR GCA 90 bp GGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTAGACCACTGTCACTaGAGCTTTCCTGGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: GTQRPIRVGIRVAICFSPLDHCH*SFPGSH
Trigger: ATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAG...AGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR CCA 90 bp GACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTCTACCCACCGGCTCATaGTCTCCTAGACCACTGTCA +
Preference number: 2 (lower is better)
Translates to: DPKAHQSWDQSCHLLQSSLPTGS*SPRPLS
Trigger: TGACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAG...AGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACCCCTGTGCCTACTGTaGGCTGCATATGGATTACAC +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRPLCLL*AAYGLH
Trigger: GTGTAATCCATATGCAGCCCACAGTAGGCACAGGGG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACCCAGGAGCAGAATTTaGCATATCAGGACAGGTTTT +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRPRSRI*HIRTGF
Trigger: AAAACCTGTCCTGATATGCCAAATTCTGCTCCTGGG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAGCAATACAGACATCTaGCTTGGCCCTGAAACCCTG +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSNTDI*LGPETL
Trigger: CAGGGTTTCAGGGCCAAGTCAGATGTCTGTATTGCT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACAATCTAAGAGCTTATaGAGGGTTCACTGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRQSKSL*RVHCVH
Trigger: ATGAACACAGTGAACCCTTCATAAGCTCTTAGATTG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACCTCCCCCTTCTCCTTaGTACTGCGGGATTGGCACC +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIPPPSP*YCGIGT
Trigger: GGTGCCAATCCCGCAGTAGCAAGGAGAAGGGGGAGG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACTGGGAGTATCTGTATaGCTCATTGTCAAAATTACT +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLGVSV*LIVKIT
Trigger: AGTAATTTTGACAATGAGTCATACAGATACTCCCAG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAGATCCAAATAGTCTaGAATCCATTAGCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKIQIV*NPLAPQ
Trigger: TTGAGGAGCTAATGGATTGCAGACTATTTGGATCTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CAGAGTTGCCATCTGCTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTGGCGCTGCGAATTTGTaGCTCATATTACAATTCTAT +
Preference number: 2 (lower is better)
Translates to: QSCHLLQSSCPERPGHRIGAANL*LILQFY
Trigger: ATAGAATTGTAATATGAGCCACAAATTCGCAGCGCC...AATTCTATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGCTGTACTACCAGCTTaGTCCTTCCCTCCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIAVLPA*SFPPPS
Trigger: AGAAGGGGGAGGGAAGGATCAAGCTGGTAGTACAGC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACAGGTAACATTTTCTaGGTGTCTGGCTATTGCGAG +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTGNIF*VSGYCE
Trigger: CTCGCAATAGCCAGACACTCAGAAAATGTTACCTGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACCTTCTCCTTGCTACTaGGGGATTGGCACCTGGCCA +
Preference number: 2 (lower is better)
Translates to: KSKRMNLNASCSRATIIKPSPCY*GIGTWP
Trigger: TGGCCAGGTGCCAATCCCGCAGTAGCAAGGAGAAGG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTCCTCAGCATGCAGCTaGTATCACACAGAGGCACAG +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSSACS*YHTEAQ
Trigger: CTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAGAAGACTTCCTATATaGCTTAGTTGCAATCTATCA +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRRRLPI*LSCNLS
Trigger: TGATAGATTGCAACTAAGCCATATAGGAAGTCTTCT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATTATACTTGATGTTCTaGGAGTATCTGTATGACTCA +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLYLMF*EYLYDS
Trigger: TGAGTCATACAGATACTCCCAGAACATCAAGTATAA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATTTTCACTAATACCTaGCCTGTGATTAGAGTCATA +
Preference number: 2 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRIFTNT*PVIRVI
Trigger: TATGACTCTAATCACAGGCCAGGTATTAGTGAAAAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 90 bp AGTCAAACTGAGAAGTATTGTAAAAGAGCAATACAGACATCTGACTaGGCCCTGAAACCCTGTAAACACCCAGACTGGTATAGTGGGACC +
Preference number: 2 (lower is better)
Translates to: SQTEKYCKRAIQTSD*ALKPCKHPDWYSGT
Trigger: GGTCCCACTATACCAGTCTGGGTGTTTACAGGGTTTCAGGGCCAAGTCAGATGTCTGTATTGCTCTTTTACAATACTTCTCAGTTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACAGACAAGCACCAGTaGAATAAATTAGACAGCGCT +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTDKHQ*NKLDSA
Trigger: AGCGCTGTCTAATTTATTTCACTGGTGCTTGTCTGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACATTCCTCAAAGACCTTaGCTGTGCTTCTATCTTTGC +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNIPQRP*LCFYLC
Trigger: GCAAAGATAGAAGCACAGTCAAGGTCTTTGAGGAAT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGACAGCTGTCAATAAGTaGGCTGAGAGTTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMTAVNK*AESWAV
Trigger: CACAGCCCAACTCTCAGCCCACTTATTGACAGCTGT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGCAAACATCTGTCAATaGCAAGCTGGTATTCTTGGA +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNANICQ*QAGILG
Trigger: TCCAAGAATACCAGCTTGCCATTGACAGATGTTTGC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAATGAAAAGATGGTGTaGGCAATAGTCGTCACACAA +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNNEKMV*AIVVTQ
Trigger: TTGTGTGACGACTATTGCTCACACCATCTTTTCATT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACATCTGACTTGGCCCTaGAACCCTGTAAACACCCAG +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREHLTWP*NPVNTQ
Trigger: CTGGGTGTTTACAGGGTTTCAGGGCCAAGTCAGATG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGATCAACACAGACTCTaGCATTTCAACAAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHDQHRL*HFNKVV
Trigger: TACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACGAAATCAGAGCCTCTaGGGTAGAACCCAACAATCC +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRNQSL*GRTQQS
Trigger: GGATTGTTGGGTTCTACCCCAGAGGCTCTGATTTCG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACTCAAATGCAGAGATaGTTGGATAGAGAGACAAAC +
Preference number: 2 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTQMQR*LDRETN
Trigger: GTTTGTCTCTCTATCCAACCATCTCTGCATTTGAGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGGCCATCACCATAGGTaGACTCCATATCGACAAAGA +
Preference number: 2 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQGHHHR*TPYRQR
Trigger: TCTTTGTCGATATGGAGTTCACCTATGGTGATGGCC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGAGAGGGAAAGAGGCTaGCACTTCCTGTTTCAATAT +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMERERG*HFLFQY
Trigger: ATATTGAAACAGGAAGTGTCAGCCTCTTTCCCTCTC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCAAAGTGTGGGCCCTaGACTAGCAGCATCAGTACC +
Preference number: 2 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASKCGP*TSSIST
Trigger: GGTACTGATGCTGCTAGTCCAGGGCCCACACTTTGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATCCTGAAATACGCCTaGGTTCACACAGTATCAGCT +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMILKYA*VHTVSA
Trigger: AGCTGATACTGTGTGAACCCAGGCGTATTTCAGGAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGTGCTTGAGATTGTTTaGACAATGTGTGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQVLEIV*TMCVKT
Trigger: TGTCTTGACACACATTGTTCAAACAATCTCAAGCAC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACAACATTATTGTATATaGGGATCAACACAGACTCTG +
Preference number: 2 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTQHYCI*GSTQTL
Trigger: CAGAGTCTGTGTTGATCCTCATATACAATAATGTTG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGTATATTTTCAGTCCTaGCCTCAGTGGTACGAAATC +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMVYFQS*PQWYEI
Trigger: GATTTCGTACCACTGAGGTCAGGACTGAAAATATAC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCCAAACTTACAAAGTaGCTCCTAGACCGATCCATC +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISKLTK*LLDRSI
Trigger: GATGGATCGGTCTAGGAGTCACTTTGTAAGTTTGGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATGGCAAGAGAAAACCTaGCAAGGAGTAATGTTTCCC +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIWQEKT*QGVMFP
Trigger: GGGAAACATTACTCCTTGGCAGGTTTTCTCTTGCCA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAAGTGGGCTGAGAGTTaGGCTGTGCAAAAACAGGTT +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREKWAES*AVQKQV
Trigger: AACCTGTTTTTGCACAGCCCAACTCTCAGCCCACTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGCCAGTTTGAATGGGTaGCCTATCCTCATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMASLNG*PILISK
Trigger: TTTTGAAATGAGGATAGGCCACCCATTCAAACTGGC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGACGTTCAGCATTTGGTaGATTTCTGAATTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMTFSIW*ISEFPQ
Trigger: TTGGGGGAATTCAGAAATCCACCAAATGCTGAACGT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAATGGAAGCATTCACTTaGTACCCAGGCCTCTTCATT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIMEAFT*YPGLFI
Trigger: AATGAAGAGGCCTGGGTACCAAGTGAATGCTTCCAT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGTTGTAGAGATCTATTaGATACATAAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQVVEIY*IHKALT
Trigger: CGTCAGAGCTTTATGTATTCAATAGATCTCTACAAC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTGTTCTAAAAATTCTTaGCTGAGCCCCAGAGGAATA +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMCSKNS*LSPRGI
Trigger: TATTCCTCTGGGGCTCAGTCAAGAATTTTTAGAACA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGACTTACGAAAGAGTCTaGCTTTTATGCCTCCATGAA +
Preference number: 2 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMTYERV*LLCLHE
Trigger: TTCATGGAGGCATAAAAGTCAGACTCTTTCGTAAGT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGAAGAGGCTTGGAAGTaGAGGAATTTGATCCTGTTT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIEEAWK*RNLILF
Trigger: AAACAGGATCAAATTCCTTCACTTCCAAGCCTCTTC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAACTCATACCTTCCCCTaGAAAACACTGGAGTATTGT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTITHTFP*KTLEYC
Trigger: ACAATACTCCAGTGTTTTTCAGGGGAAGGTATGAGT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTGAAGCAGTCAATTTaGAAACCCCCAGGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELKQSI*KPPGAE
Trigger: TTCTGCTCCTGGGGGTTTCCAAATTGACTGCTTCAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGATAGCCAGTTTGAATaGGTGGCCTATCCTCATTTC +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREDSQFE*VAYPHF
Trigger: GAAATGAGGATAGGCCACCCATTCAAACTGGCTATC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTCAGAACCATCCTGTaGGTTCTTATTTCTGCAGTG +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIFRTIL*VLISAV
Trigger: CACTGCAGAAATAAGAACCCACAGGATGGTTCTGAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 90 bp GAATCAATCAAATATTCCTCAAAGACCTTGACTGTGCTTCTATCTTaGCCATTCTTAGCTGTACAGGTGGTCTCAAGCCCATCATTTAAA +
Preference number: 2 (lower is better)
Translates to: ESIKYSSKTLTVLLS*PFLAVQVVSSPSFK
Trigger: TTTAAATGATGGGCTTGAGACCACCTGTACAGCTAAGAATGGCAAAGATAGAAGCACAGTCAAGGTCTTTGAGGAATATTTGATTGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGTGCTTGAGATTGTTTaGACAATGTGTGTCAAGACA +
Preference number: 2 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCVLEIV*TMCVKT
Trigger: TGTCTTGACACACATTGTTCAAACAATCTCAAGCAC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
3UTR-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACATTTGGTGGATTTCTaGATTCCCCCAACCGAAAAA +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREHLVDF*IPPTEK
Trigger: TTTTTCGGTTGGGGGAATTCAGAAATCCACCAAATG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATAAACAAGTACAGATaGGCCATCACCATAGGTGAA +
Preference number: 2 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQINKYR*AITIGE
Trigger: TTCACCTATGGTGATGGCCCATCTGTACTTGTTTAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTCTGGCATACTGTCTaGATGGCTCAAAAGTCTATT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIFWHTV*MAQKSI
Trigger: AATAGACTTTTGAGCCATCCAGACAGTATGCCAGAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCAACATTATTGTATATaGGGATCAACACAGACTCTG +
Preference number: 2 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCQHYCI*GSTQTL
Trigger: CAGAGTCTGTGTTGATCCTCATATACAATAATGTTG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
3UTR-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAATTCTGGATTTGGTTaGAATATGAGTTTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQANSGFG*NMSFSA
Trigger: GGCTGAGAAACTCATATTTCAACCAAATCCAGAATT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTAGTAGCCTCCAAATaGCCATATATTTGTTGGATG +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILVASK*PYICWM
Trigger: CATCCAACAAATATATGGTCATTTGGAGGCTACTAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGATCAACACAGACTCTaGCATTTCAACAAAGTTGTA +
Preference number: 2 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCDQHRL*HFNKVV
Trigger: TACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
3UTR-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTTAGCAACCATAGCTaGAACATAATTGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAFSNHS*NIIAVT
Trigger: TGTGACTGCAATTATGTTGCAGCTATGGTTGCTAAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACTATCAACGATCATGTaGTTCACAGCTGATGTACAT +
Preference number: 2 (lower is better)
Translates to: KSKRMNLNASCSRATIIKLSTIM*FTADVH
Trigger: ATGTACATCAGCTGTGAAGCACATGATCGTTGATAG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACCTATATGGCTTAGTTaGAATCTATCAACGATCATG +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIPIWLS*NLSTIM
Trigger: CATGATCGTTGATAGATTGCAACTAAGCCATATAGG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGCTTCATTTCATAACTaGTTCTGTGTTTCCGTTCTT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIASFHN*FCVSVL
Trigger: AAGAACGGAAACACAGAAGCAGTTATGAAATGAAGC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATATAGGTTCAACTTTTaGGGAGGTCAGAAAAAGTGG +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREYRFNF*GGQKKW
Trigger: CCACTTTTTCTGACCTCCCCAAAAGTTGAACCTATA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAAAACAATTTGCATTTaGGGGATCAGTTGTCACCTG +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREKTICI*GISCHL
Trigger: CAGGTGACAACTGATCCCCCAAATGCAAATTGTTTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACGTGATATGTGCTTATaGCACTCTAATCAATCAAAC +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRDMCL*HSNQSN
Trigger: GTTTGATTGATTAGAGTGCCATAAGCACATATCACG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTGAGGCATTTTAGCTaGTTTGATTACACCATGGAT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILRHFS*FDYTMD
Trigger: ATCCATGGTGTAATCAAACCAGCTAAAATGCCTCAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 90 bp TTTCTTGAAATTCTAAAGGTGCAAAGTCTAGGAGCTGATGCCCATTaGCCTTGTCTACTACATCACCTCAGAAAAATCATTACAGAATTT +
Preference number: 2 (lower is better)
Translates to: FLEILKVQSLGADAH*PCLLHHLRKIITEF
Trigger: AAATTCTGTAATGATTTTTCTGAGGTGATGTAGTAGACAAGGCAAATGGGCATCAGCTCCTAGACTTTGCACCTTTAGAATTTCAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATCATCTTTTGCCATTTaGAGGAAACTGAAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRESSFAI*RKLKGE
Trigger: TTCTCCTTTCAGTTTCCTTCAAATGGCAAAAGATGA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAACTTAAATGCTAGTTaGTCCAGAGCAACTATCATT +
Preference number: 2 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQNLNAS*SRATII
Trigger: AATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACATTAGTTAACATTTaGCCCCTTCACTTTCAATTG +
Preference number: 2 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTLVNI*PLHFQL
Trigger: CAATTGAAAGTGAAGGGGGCAAATGTTAACTAATGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAATGGAAGGCCAAAATaGGTCTTGAATTTTATAGCT +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTINGRPK*VLNFIA
Trigger: AGCTATAAAATTCAAGACGCATTTTGGCCTTCCATT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACAAACATGTACTATATaGCATGCTACAATCCTTGTA +
Preference number: 2 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIQTCTI*HATILV
Trigger: TACAAGGATTGTAGCATGGCATATAGTACATGTTTG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAATAAAAGGTATCTTTaGCTGTACTACCAGCTTGAT +
Preference number: 2 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQNKRYL*LYYQLD
Trigger: ATCAAGCTGGTAGTACAGCCAAAGATACCTTTTATT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTTGTAGAGATCTATTaGATACATAAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVVEIY*IHKALT
Trigger: CGTCAGAGCTTTATGTATTCAATAGATCTCTACAAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTTGTAGAGATCTATTaGATACATAAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVVEIY*IHKALT
Trigger: CGTCAGAGCTTTATGTATTCAATAGATCTCTACAAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGATATTCAAATTTTGTaGCAACAGACAAGCACCAGT +
Preference number: 2 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLADIQIL*QQTSTS
Trigger: ACTGGTGCTTGTCTGTTGCCACAAAATTTGAATATC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGTTCCATATGAACATTaGAATACCCATAGGAGAACT +
Preference number: 2 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAVPYEH*NTHRRT
Trigger: AGTTCTCCTATGGGTATTCCAATGTTCATATGGAAC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAAAGCCTTGTTGGAATaGATAATGTTGTCGTTTTCA +
Preference number: 2 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREKALLE*IMLSFS
Trigger: TGAAAACGACAACATTATCCATTCCAACAAGGCTTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAAATGCAGAGATGGTTaGATAGAGAGACAAACTATA +
Preference number: 2 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAKCRDG*IERQTI
Trigger: TATAGTTTGTCTCTCTATCCAACCATCTCTGCATTT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp GGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTaGCATCTGCTTCAGTCCTCTTGTCCGGAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: GDPKAHQSWDQS*HLLQSSCPERP
Trigger: AGGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACTTGCTACTGCGGGATaGGCACCTGGCCAGCACAAG +
Preference number: 3 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLATAG*APGQHK
Trigger: CTTGTGCTGGCCAGGTGCCAATCCCGCAGTAGCAAG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp GAATTCGTCCTGTGGCTGAACCAGAGGAAGAGGGTGTaGGATCAGGGTTCCACTACCCACCGGCTCATGGTC +
Preference number: 3 (lower is better)
Translates to: EFVLWLNQRKRV*DQGSTTHRLMV
Trigger: GACCATGAGCCGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCTGGTTCAGCCACAGGACGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR GCA 72 bp CAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTaGTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATA +
Preference number: 3 (lower is better)
Translates to: QRPIRVGIRVAI*FSPLVRRGLVI
Trigger: TATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR CAA 90 bp GGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCCACGGCGCTGCGAATTaGTGGCTCATATTACAATTC +
Preference number: 3 (lower is better)
Translates to: GDPKAHQSWDQSCHLLQSHGAAN*WLILQF
Trigger: GAATTGTAATATGAGCCACAAATTCGCAGCGCCGTG...GGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
3UTR-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGATGGAAGCATTCACTaGGTACCCAGGCCTCTTCAT +
Preference number: 3 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRDGSIH*VPRPLH
Trigger: ATGAAGAGGCCTGGGTACCAAGTGAATGCTTCCATC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp TACTGCGGGATTGGCACCTGGCCAGCACAAGCGACATaGTACCCTAGTGCCATCTACAGGCTATTATCGATA +
Preference number: 3 (lower is better)
Translates to: YCGIGTWPAQAT*YPSAIYRLLSI
Trigger: TATCGATAATAGCCTGTAGATGGCACTAGGGTATCATGTCGCTTGTGCTGGCCAGGTGCCAATCCCGCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp GATCATCAGGAACCAGGGCCATGTGAGGAACAATCCTaGAATACGCCTGGGTTCACACAGTATCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: DHQEPGPCEEQS*NTPGFTQYQLE
Trigger: CTCCAGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATTGTTCCTCACATGGCCCTGGTTCCTGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp TCTGACTTGGCCCTGAAACCCTGTAAACACCCAGACTaGTATAGTGGGACCAAGGCTACAACTGTAACGTTC +
Preference number: 3 (lower is better)
Translates to: SDLALKPCKHPD*YSGTKATTVTF
Trigger: GAACGTTACAGTTGTAGCCTTGGTCCCACTATACCAGTCTGGGTGTTTACAGGGTTTCAGGGCCAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACACAGAGGCACAGATaGGTTGCATCCACCGAATCC +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTQRHR*VASTES
Trigger: GGATTCGGTGGATGCAACCAATCTGTGCCTCTGTGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp AAAGCATATACACCTTCTGCAAGAAGTCAGGCGGCATaGGGGAGGCTGAGTAGAGGACACATACAAATGCAG +
Preference number: 3 (lower is better)
Translates to: KAYTPSARSQAA*GRLSRGHIQMQ
Trigger: CTGCATTTGTATGTGTCCTCTACTCAGCCTCCCTCATGCCGCCTGACTTCTTGCAGAAGGTGTATATGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp AATCCTGAAATACGCCTGGGTTCACACAGTATCAGCTaGAGAGGATGCACAGTCCCTGCAAATAACAGATGG +
Preference number: 3 (lower is better)
Translates to: NPEIRLGSHSIS*RGCTVPANNRW
Trigger: CCATCTGTTATTTGCAGGGACTGTGCATCCTCTCCAGCTGATACTGTGTGAACCCAGGCGTATTTCAGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp CAGATAAGTTGGAGGAGGGCCTATACTGATCTTAGCTaGCAAATTTGTGCAGAGATGCCTGGTGGTTGCTTC +
Preference number: 3 (lower is better)
Translates to: QISWRRAYTDLS*QICAEMPGGCF
Trigger: GAAGCAACCACCAGGCATCTCTGCACAAATTTGCCAGCTAAGATCAGTATAGGCCCTCCTCCAACTTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGGCTGTACTACCAGCTaGATCCTTCCCTCCCCCTTC +
Preference number: 3 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMGCTTS*ILPSPF
Trigger: GAAGGGGGAGGGAAGGATCAAGCTGGTAGTACAGCC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp TTTGAGACCAAAAGATCATCAGGAACCAGGGCCATGTaGGGAACAATCCTGAAATACGCCTGGGTTCACACA +
Preference number: 3 (lower is better)
Translates to: FETKRSSGTRAM*GTILKYAWVHT
Trigger: TGTGTGAACCCAGGCGTATTTCAGGATTGTTCCTCACATGGCCCTGGTTCCTGATGATCTTTTGGTCTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp CACCTTCTGCAAGAAGTCAGGCGGCATGAGGGAGGCTaGGTAGAGGACACATACAAATGCAGATTTATCTAT +
Preference number: 3 (lower is better)
Translates to: HLLQEVRRHEGG*VEDTYKCRFIY
Trigger: ATAGATAAATCTGCATTTGTATGTGTCCTCTACTCAGCCTCCCTCATGCCGCCTGACTTCTTGCAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp AGCTGGAGAGGATGCACAGTCCCTGCAAATAACAGATaGTCCTGCAAGAATAGTTTAAACCCTGAGGAGTGT +
Preference number: 3 (lower is better)
Translates to: SWRGCTVPANNR*SCKNSLNPEEC
Trigger: ACACTCCTCAGGGTTTAAACTATTCTTGCAGGACCATCTGTTATTTGCAGGGACTGTGCATCCTCTCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp AGGGTTCACTGTGTTCATACAGATCTATGCAAAATGTaGCAGAGCTTCCCTGTCTGTGATGGCATTCATCTG +
Preference number: 3 (lower is better)
Translates to: RVHCVHTDLCKM*QSFPVCDGIHL
Trigger: CAGATGAATGCCATCACAGACAGGGAAGCTCTGGCACATTTTGCATAGATCTGTATGAACACAGTGAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp GTAATAGGAGTGATGGATACGGTGAAAATTCCCAGATaGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAA +
Preference number: 3 (lower is better)
Translates to: VIGVMDTVKIPR*VELLGNLWGRK
Trigger: TTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGGAATTTTCACCGTATCCATCACTCCTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCAAATGCATATTCTATaGTTCATAGCAGCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHQMHIL*FIAAVQ
Trigger: CTGGACTGCTGCTATGAACAATAGAATATGCATTTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR TCA 72 bp AGATCTATGCAAAATGTGCCAGAGCTTCCCTGTCTGTaGTGGCATTCATCTGGAGGTGAATCCCAAATTTCT +
Preference number: 3 (lower is better)
Translates to: RSMQNVPELPCL*WHSSGGESQIS
Trigger: AGAAATTTGGGATTCACCTCCAGATGAATGCCATCACAGACAGGGAAGCTCTGGCACATTTTGCATAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp TTGGCTCTTGTAATGTCCATTTGGATCCAGTCTGCCTaGCTGTCACAATCACAACCAATAGGCATAATGTCA +
Preference number: 3 (lower is better)
Translates to: LALVMSIWIQSA*LSQSQPIGIMS
Trigger: TGACATTATGCCTATTGGTTGTGATTGTGACAGGCAGGCAGACTGGATCCAAATGGACATTACAAGAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACCCCAGGAGCAGAATTaGGCATATCAGGACAGGTTT +
Preference number: 3 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQPQEQN*AYQDRF
Trigger: AAACCTGTCCTGATATGCCAAATTCTGCTCCTGGGG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGCATGGCAGAAAATCTaGCCATTTAAGACCAAGAAT +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNAWQKI*PFKTKN
Trigger: ATTCTTGGTCTTAAATGGCAAGATTTTCTGCCATGC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp ATCCCTGCTAGAAGGGGCATAGTTGTAGAGATCTATTaGATACATAAAGCTCTGACGCACACGGTATTAGCA +
Preference number: 3 (lower is better)
Translates to: IPARRGIVVEIY*IHKALTHTVLA
Trigger: TGCTAATACCGTGTGCGTCAGAGCTTTATGTATTCAATAGATCTCTACAACTATGCCCCTTCTAGCAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR GCA 72 bp AAACAGCTGTCAATAAGTGGGCTGAGAGTTGGGCTGTaGAAAAACAGGTTCTCTGGATATGATAATACGAGA +
Preference number: 3 (lower is better)
Translates to: KQLSISGLRVGL*KNRFSGYDNTR
Trigger: TCTCGTATTATCATATCCAGAGAACCTGTTTTTGCACAGCCCAACTCTCAGCCCACTTATTGACAGCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp AAATCAATCATCTATTATGACTCTCACAGGCCCCTGTaGCTACTGTGGGCTGCATATGGATTACACACTTTT +
Preference number: 3 (lower is better)
Translates to: KSIIYYDSHRPL*LLWAAYGLHTF
Trigger: AAAAGTGTGTAATCCATATGCAGCCCACAGTAGGCACAGGGGCCTGTGAGAGTCATAATAGATGATTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp CAACTGATAATAGAAAGAAGTAGGCCAGATGGATGTTaGGTGGCAAGAGAAAACCTGCCAAGGAGTAATGTT +
Preference number: 3 (lower is better)
Translates to: QLIIERSRPDGC*VARENLPRSNV
Trigger: AACATTACTCCTTGGCAGGTTTTCTCTTGCCACCCAACATCCATCTGGCCTACTTCTTTCTATTATCAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTCAAGAAAAGATCTCTaGCATACTTTGCTGAAATGC +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSRKDL*HTLLKC
Trigger: GCATTTCAGCAAAGTATGCAAGAGATCTTTTCTTGA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTTGGAATGGATAATGTaGTCGTTTTCATCCTCTTCA +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNLEWIM*SFSSSS
Trigger: TGAAGAGGATGAAAACGACAACATTATCCATTCCAA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACATTTGGGGGATCAGTaGTCACCTGTGTTCAACTGT +
Preference number: 3 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQHLGDQ*SPVFNC
Trigger: ACAGTTGAACACAGGTGACAACTGATCCCCCAAATG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGGAAAGATAGCCAGTTaGAATGGGTGGCCTATCCTC +
Preference number: 3 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREGKIAS*NGWPIL
Trigger: GAGGATAGGCCACCCATTCAAACTGGCTATCTTTCC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGCAGTTGCTATTGTCTaGCACAAAAACTGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNAVAIV*HKNCFL
Trigger: AAGAAAACAGTTTTTGTGCAAGACAATAGCAACTGC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGTCTCCATTTGTCATTaGCACCTTCTACAAAAAGTT +
Preference number: 3 (lower is better)
Translates to: PRWVELLGNLWGRKFITNVSICH*HLLQKV
Trigger: AACTTTTTGTAGAAGGTGCAAATGACAAATGGAGAC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp ACCGTAAACTATTCTCCCCTGACTAGAACTGTGACCTaGAGCAAATCATTCAACTTCTCCTCAGCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: TVNYSPLTRTVT*SKSFNFSSAVK
Trigger: TTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACAGTTCTAGTCAGGGGAGAATAGTTTACGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp ATATCTTTCCTACCTCTCAGTATTGGCTACAACATCTaGTCTTCTATTAGGGAAACACTCATACCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: ISFLPLSIGYNI*SSIRETLIPSP
Trigger: AGGGGAAGGTATGAGTGTTTCCCTAATAGAAGAGCAGATGTTGTAGCCAATACTGAGAGGTAGGAAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp GTCAAGCACCCAGTCAATCTCTATAACTCACCAAGTTaGCTCTTATTGGTCAGAATGAAAAGCATATACACC +
Preference number: 3 (lower is better)
Translates to: VKHPVNLYNSPS*LLLVRMKSIYT
Trigger: GGTGTATATGCTTTTCATTCTGACCAATAAGAGGCAACTTGGTGAGTTATAGAGATTGACTGGGTGCTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp ATGAAGATATATTCTCCCAGTGCATTGCAGATAAGTTaGAGGAGGGCCTATACTGATCTTAGCTGGCAAATT +
Preference number: 3 (lower is better)
Translates to: MKIYSPSALQIS*RRAYTDLSWQI
Trigger: AATTTGCCAGCTAAGATCAGTATAGGCCCTCCTCCAACTTATCTGCAATGCACTGGGAGAATATATCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGGTAAGGTGAAAGTCTaGAAGCAGTCAATTTGGAAA +
Preference number: 3 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMGKVKV*KQSIWK
Trigger: TTTCCAAATTGACTGCTTCAAGACTTTCACCTTACC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGACAGCCCAATAGGTTaGTATCAAACAAAGGCAAAA +
Preference number: 3 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMDSPIG*YQTKAK
Trigger: TTTTGCCTTTGTTTGATACAAACCTATTGGGCTGTC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGTGGCATACCAGTATTaGGATTTACTGAGTTGCCAT +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIVAYQY*DLLSCH
Trigger: ATGGCAACTCAGTAAATCCAAATACTGGTATGCCAC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp GAACTAGCATTACGAAATCCTAGAAAGTTGGTGTGCTaGGAGCTAATCACAAAAGAGCAAGCGAATGAACTT +
Preference number: 3 (lower is better)
Translates to: ELALRNPRKLVC*ELITKEQANEL
Trigger: AAGTTCATTCGCTTGCTCTTTTGTGATTAGCTCTCAGCACACCAACTTTCTAGGATTTCGTAATGCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp TTGATTACACCATGGATGCCATTACTTCAACAGGGATaGTTTCCAGTCTATGGAATAATTGGAAGCAAGAAC +
Preference number: 3 (lower is better)
Translates to: LITPWMPLLQQG*FPVYGIIGSKN
Trigger: GTTCTTGCTTCCAATTATTCCATAGACTGGAAAGCATCCCTGTTGAAGTAATGGCATCCATGGTGTAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCACAAGTGCTTGAGATaGTTTGAACAATGTGTGTCA +
Preference number: 3 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCHKCLR*FEQCVS
Trigger: TGACACACATTGTTCAAACAATCTCAAGCACTTGTG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
3UTR-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTTACTCTTTCAAAATaGTGTAGCTTCAGGAGCACA +
Preference number: 3 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVTLSK*CSFRST
Trigger: TGTGCTCCTGAAGCTACACAATTTTGAAAGAGTAAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAAAAACAATTTGCATTaGGGGGATCAGTTGTCACCT +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIKNNLH*GDQLSP
Trigger: AGGTGACAACTGATCCCCCAAATGCAAATTGTTTTT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATACAGACATCTGACTaGGCCCTGAAACCCTGTAAA +
Preference number: 3 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAIQTSD*ALKPCK
Trigger: TTTACAGGGTTTCAGGGCCAAGTCAGATGTCTGTAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAAGCCTCTTCCTGACTaGCATTTCCAAATTTTCACT +
Preference number: 3 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQKPLPD*HFQIFT
Trigger: AGTGAAAATTTGGAAATGCAAGTCAGGAAGAGGCTT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAATTGCAAATCATTCATaGTCAGGAGAGACTGAACCA +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIIANHS*SGETEP
Trigger: TGGTTCAGTCTCTCCTGACAATGAATGATTTGCAAT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAATCATTAGCTGGTGTTaGACATCTACTTTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIIISWC*TSTFKA
Trigger: TGCCTTGAAAGTAGATGTCAAACACCAGCTAATGAT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp ATCACTGATCTTCAGGTTGCATCAAAATTTACTGAATaGCTACTAAGTTCACTCTTTTCAGCACTGTTGTGG +
Preference number: 3 (lower is better)
Translates to: ITDLQVASKFTE*LLSSLFSALLW
Trigger: CCACAACAGTGCTGAAAAGAGTGAACTTAGTAGGCATTCAGTAAATTTTGATGCAACCTGAAGATCAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp GGTCTGATATTCAAGATAATATCCACACTATGTCCCTaGCCTGTTTGGTATCCCAATGCTATAAAATGGATA +
Preference number: 3 (lower is better)
Translates to: GLIFKIISTLCP*PVWYPNAIKWI
Trigger: TATCCATTTTATAGCATTGGGATACCAAACAGGGCAGGGACATAGTGTGGATATTATCTTGAATATCAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp AAGCATTCACTAAATGAATGTGCAAACATCTGTCAATaGCAAGCTGGTATTCTTGGACAGGAGGTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: KHSLNECANICQ*QAGILGQEVEK
Trigger: TTTTTCTACCTCCTGTCCAAGAATACCAGCTTGCCATTGACAGATGTTTGCACATTCATTTAGTGAATGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCAAATGCATATTCTATaGTTCATAGCAGCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNQMHIL*FIAAVQ
Trigger: CTGGACTGCTGCTATGAACAATAGAATATGCATTTG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATTTTTGAAAGAGTATTaGGCCACTGCGGACACTAAA +
Preference number: 3 (lower is better)
Translates to: KSKRMNLNASCSRATIIKFLKEY*ATADTK
Trigger: TTTAGTGTCCGCAGTGGCCAAATACTCTTTCAAAAA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAATCGATATTCAAATTTaGTGGCAACAGACAAGCACC +
Preference number: 3 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREIDIQI*WQQTST
Trigger: GGTGCTTGTCTGTTGCCACAAAATTTGAATATCGAT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATCATTTAAAGCCTTGTaGGAATGGATAATGTTGTCG +
Preference number: 3 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQSFKAL*EWIMLS
Trigger: CGACAACATTATCCATTCCAACAAGGCTTTAAATGA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGAATTGCAGTTGCTATaGTCTTGCACAAAAACTGTT +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIELQLL*SCTKTV
Trigger: AACAGTTTTTGTGCAAGACAATAGCAACTGCAATTC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGATTTTATGGTGAAGTaGGTCATTACAGACAACAGA +
Preference number: 3 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIDFMVK*VITDNR
Trigger: TCTGTTGTCTGTAATGACCAACTTCACCATAAAATC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp ATTTTCAGCACTGATTTCCTGCAATCTAAGAGCTTATaGAGGGTTCACTGTGTTCATACAGATCTATGCAAA +
Preference number: 3 (lower is better)
Translates to: IFSTDFLQSKSL*RVHCVHTDLCK
Trigger: TTTGCATAGATCTGTATGAACACAGTGAACCCTTCATAAGCTCTTAGATTGCAGGAAATCAGTGCTGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp CACTTAATCTTAGGACAACTTTATATGGATTTGGCATaGTTACACCCATTTTGCAGACAAGGAAAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: HLILGQLYMDLA*LHPFCRQGKQG
Trigger: TCCTTGCTTTCCTTGTCTGCAAAATGGGTGTAATCATGCCAAATCCATATAAAGTTGTCCTAAGATTAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp CAATTTATGAGAGGAAGAAATGGACTGATGTATAAGTaGGGGTGTTCATTTTGTCCATATTTGCATCAGGGT +
Preference number: 3 (lower is better)
Translates to: QFMRGRNGLMYK*GCSFCPYLHQG
Trigger: ACCCTGATGCAAATATGGACAAAATGAACACCCTCACTTATACATCAGTCCATTTCTTCCTCTCATAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp AACAACATTATTGTATATGAGGATCAACACAGACTCTaGCATTTCAACAAAGTTGTAGACACACATTTGCCC +
Preference number: 3 (lower is better)
Translates to: NNIIVYEDQHRL*HFNKVVDTHLP
Trigger: GGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR GCA 72 bp TTGAAATCAAAGAGAAGACTTCCTATATGGCTTAGTTaGAATCTATCAACGATCATGTGCTTCACAGCTGAT +
Preference number: 3 (lower is better)
Translates to: LKSKRRLPIWLS*NLSTIMCFTAD
Trigger: ATCAGCTGTGAAGCACATGATCGTTGATAGATTGCAACTAAGCCATATAGGAAGTCTTCTCTTTGATTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp ACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTaGAATCCATTAGCTCCTCAATATCCTGAAAGGGAT +
Preference number: 3 (lower is better)
Translates to: TVYNRSLKIQIV*NPLAPQYPERD
Trigger: ATCCCTTTCAGGATATTGAGGAGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp GCAGACATAATGATATGTCCAAAATTACTGAGAAAATaGGACCCACAGACATCTCTAAGTGATGGAAGAATA +
Preference number: 3 (lower is better)
Translates to: ADIMICPKLLRK*DPQTSLSDGRI
Trigger: TATTCTTCCATCACTTAGAGATGTCTGTGGGTCCCATTTTCTCAGTAATTTTGGACATATCATTATGTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCACAAGTGCTTGAGATaGTTTGAACAATGTGTGTCA +
Preference number: 3 (lower is better)
Translates to: TTTLLYMRINTDSAISTKHKCLR*FEQCVS
Trigger: TGACACACATTGTTCAAACAATCTCAAGCACTTGTG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATTCTGCCACTATTCTaGTCTATCAGAGACAAACTG +
Preference number: 3 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAILPLF*SIRDKL
Trigger: CAGTTTGTCTCTGATAGACAAGAATAGTGGCAGAAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGTACCACCTAGGAACTaGTTAGCAATGTATATTTTC +
Preference number: 3 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAVPPRN*LAMYIF
Trigger: GAAAATATACATTGCTAACAAGTTCCTAGGTGGTAC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR TCA 72 bp TATTACTTACGAAAGAGTCTGACTTTTATGCCTCCATaGAACTTTAGAATAAGCCTCTTCCTGACTTGCATT +
Preference number: 3 (lower is better)
Translates to: YYLRKSLTFMPP*NFRISLFLTCI
Trigger: AATGCAAGTCAGGAAGAGGCTTATTCTAAAGTTTCATGGAGGCATAAAAGTCAGACTCTTTCGTAAGTAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp CATCTGGAGGTGAATCCCAAATTTCTATCACTGGCATaGTTATTTCCGACTAAAATAAATATTCTCAGAATG +
Preference number: 3 (lower is better)
Translates to: HLEVNPKFLSLA*LFPTKINILRM
Trigger: CATTCTGAGAATATTTATTTTAGTCGGAAATAAGCATGCCAGTGATAGAAATTTGGGATTCACCTCCAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CCA 72 bp TCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATaGCACTCTAATCAATCAAACTGTAAAAGATCAAGG +
Preference number: 3 (lower is better)
Translates to: SQAHHLKRDMCL*HSNQSNCKRSR
Trigger: CCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp TCTCTGGAGAGTGTAATCAATTCTAGTAAACAAAATTaGATGGCTAGAACTATCTTCTCTCATATGTTGCAA +
Preference number: 3 (lower is better)
Translates to: SLESVINSSKQN*MARTIFSHMLQ
Trigger: TTGCAACATATGAGAGAAGATAGTTCTAGCCATGCAATTTTGTTTACTAGAATTGATTACACTCTCCAGAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR GCA 72 bp CCTATATGGCTTAGTTGCAATCTATCAACGATCATGTaGTTCACAGCTGATGTACATTTAATATTCTACTAT +
Preference number: 3 (lower is better)
Translates to: PIWLSCNLSTIM*FTADVHLIFYY
Trigger: ATAGTAGAATATTAAATGTACATCAGCTGTGAAGCACATGATCGTTGATAGATTGCAACTAAGCCATATAGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR GCA 72 bp ATAAAGAGATTAAATATAATTCAGGTAACACGTGATTaGCAAAGAGGATCTTATTTCTTGCCCTGCGAAATG +
Preference number: 3 (lower is better)
Translates to: IKRLNIIQVTRD*QRGSYFLPCEM
Trigger: CATTTCGCAGGGCAAGAAATAAGATCCTCTTTGGCAATCACGTGTTACCTGAATTATATTTAATCTCTTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp CGGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTaGCCATCTGCTTCAGTCCTCTTGTCCGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RGPKGPSELGSE*PSASVLLSGEA
Trigger: GGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGATTGGCCTGCATCTTaGGGCGCGGGCGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHDWPAS*GAGGRS
Trigger: GCTGCGGCCGCCCGCGCCGCAAGATGCAGGCCAATC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544246.5
3UTR CAA 72 bp GATCCTTCCCTCCCCCTTCTCCTTGCTACTGCGGGATaGGCACCTGGCCAGCACAAGCGACATGATACCCTA +
Preference number: 4 (lower is better)
Translates to: DPSLPLLLATAG*APGQHKRHDTL
Trigger: TAGGGTATCATGTCGCTTGTGCTGGCCAGGTGCCAATCCCGCAGTAGCAAGGAGAAGGGGGAGGGAAGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTTGTCCGGGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RPIRVGIRVAICFSPLVREPSGR*NVTRRC
Trigger: GCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTC...CCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATCTCACAGGCCCCTGTaGCTACTGTGGGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRSHRPL*LLWAAY
Trigger: ATATGCAGCCCACAGTAGGCACAGGGGCCTGTGAGA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTCCTGTGGCTGAACCACTAGACCACTGTCACTaGAGCTTTCCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QSSCPERPGHRIRPVAEPLDHCH*SFPGSH
Trigger: ATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAG...TGGTTCAGCCACAGGACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR GCA 90 bp GGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCATCAGAGTTGCCATCTaGTTCAGTCCTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GDPKAHQSWDQSCHLLQSIRVAI*FSPLVR
Trigger: CCGGACAAGAGGACTGAAGCAGATGGCAACTCTGAT...GGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CCA 90 bp CCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTTGCTACCCACCGGCTCATaGTCTCCTAGACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: PKGPSELGSELPSASVLLLPTGS*SPRPLS
Trigger: TGACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAG...CAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR TCA 90 bp GGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCCTTTCTTCATTCTCCTaGATGTGGAAACCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GDPKAHQSWDQSCHLLQSLSSFS*MWKPVE
Trigger: CTCCACGGGTTTCCACATTCAGGAGAATGAAGAAAG...GGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRSRGTR*LSSISG
Trigger: GCCACTGATGGAGGACAACCACCTCGTTCCTCTACT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCCACGGAGCCAGGAATaGCTGAGAGGGGCACCAACT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHPRSQE*LRGAPT
Trigger: AGTTGGTGCCCCTCTCAGCCATTCCTGGCTCCGTGG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGCTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTCCTGTGGCTGGAATGTGGAAACCCGTaGAGCTGGGACATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CFSPLVRRGLVIEFVLWLECGNP*SWDISE
Trigger: CTCAGAAATGTCCCAGCTCCACGGGTTTCCACATTC...CAGCCACAGGACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CCA 90 bp GAACCAGAGGAAGAGGGTGTGAGATCAGGGTTCCACTACCCACCGGCTCATGGTATAGAATTCGTCCTGTaGCTGAACCAGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: EPEEEGVRSGFHYPPAHGIEFVL*LNQRKR
Trigger: CCTCTTCCTCTGGTTCAGCCACAGGACGAATTCTAT...ACCATGAGCCGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCTGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCCGGGAGGCGGAGCTTaGAGTGAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNPGGGA*SEPRSH
Trigger: GTGTGATCTTGGCTCACTGCAAGCTCCGCCTCCCGG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACAGCCGCTTGGCTTTaGAGGGGAGGGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTAAWL*RGGVPL
Trigger: CAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACACAATCACAGCCGCTTaGCTTTGGAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHTITAA*LWRGGV
Trigger: GACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHRLECC*RCRAPV
Trigger: GACTGGGGCCCGGCACCTCCAACAACATTCAAGCCT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGTGCTTCAGAGACTCTaGGGCGCTCCTTTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNVLQRL*GAPFRL
Trigger: GAGACGGAAAGGAGCGCCTCAGAGTCTCTGAAGCAC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACTGCATCTGTCACTGTaGTTACCCCCACAGTACTAT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLHLSL*LPPQYY
Trigger: ATAGTACTGTGGGGGTAATCACAGTGACAGATGCAG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGAGCCAGGAATGGCTaGGAGGGGCACCAACTTAAA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGARNG*EGHQLK
Trigger: TTTAAGTTGGTGCCCCTCTCAGCCATTCCTGGCTCC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSCFEP*CMATAH
Trigger: GTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGGCACTGAAGTGATCTaGACTAGTGGAAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRGTEVI*TSGRAF
Trigger: AAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAGGGGCCCTTTGTCTTaGAGCCTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNRGPLS*SLLGNC
Trigger: GCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCTGTGGCTGAACCAGAGGAAGAGGGTGTGAGATCAGGGTTCCACTACCCACCGGACATTTCTGAGGAGTaGCAGGAATATTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: PVAEPEEEGVRSGFHYPPDISEE*QEYCHF
Trigger: AAAGTGACAATATTCCTGTCACTCCTCAGAAATGTC...CGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCTGGTTCAGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR TCA 90 bp GATCAGAGTTGCCATCTGCTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAGAGCTGGGACATTTCTaGGGAGTGACAGGAATATTG +
Preference number: 4 (lower is better)
Translates to: DQSCHLLQSSCPERPGHRELGHF*GVTGIL
Trigger: CAATATTCCTGTCACTCCTCAGAAATGTCCCAGCTC...TCTATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR TCA 90 bp TGCTTCAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTCCTGTGGCTGAAAACCAAGCACTCTTaGGTGCACATCTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: CFSPLVRRGLVIEFVLWLKTKHS*VHISVA
Trigger: AGCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTT...CAGCCACAGGACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATCACTTACTGTGACCTaGAGTATGGCCGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRSLTVT*SMAVLD
Trigger: ATCCAGTACGGCCATACTGCAGGTCACAGTAAGTGA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAATCTTCCTATACTTTaGTCCTCCAGTTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRNLPIL*SSSSAG
Trigger: GCCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCCTTCTCCTTGCTACTaGGGGATTGGCACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNPSPCY*GIGTWP
Trigger: TGGCCAGGTGCCAATCCCGCAGTAGCAAGGAGAAGG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATCAGCTGGAGAGGATaGACAGTCCCTGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRISWRG*TVPANN
Trigger: GTTATTTGCAGGGACTGTGCATCCTCTCCAGCTGAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGAGCTGATGCCCATTTaGCTTGTCTACTACATCACC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRELMPI*LVYYIT
Trigger: GGTGATGTAGTAGACAAGGCAAATGGGCATCAGCTC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCCCCCGGGCTCTGATTaGCCTGCATCTTGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCPPGSD*PASCGA
Trigger: CGCGCCGCAAGATGCAGGCCAATCAGAGCCCGGGGG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACAGCCGCTTGGCTTTaGAGGGGAGGGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTTAAWL*RGGVPL
Trigger: CAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCCTCTGAGCTGCTTTaGACCTTGATGCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSSELL*TLMHGD
Trigger: GTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGGGGCCCTTTGTCTTaGAGCCTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRGPLS*SLLGNC
Trigger: GCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGATTGGCCTGCATCTTaGGGCGCGGGCGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLADWPAS*GAGGRS
Trigger: GCTGCGGCCGCCCGCGCCGCAAGATGCAGGCCAATC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACCTTTCCGTCTCGCGTaGTCTCCCTCTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQPFRLA*SPSLPS
Trigger: GGAAGGGAGAGAGGGAGAGCACGCGAGACGGAAAGG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGATAGGTTCATGAACTaGATCATCGGGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRDRFMN*IIGFGL
Trigger: GAGTCCAAACCCGATGATGCAGTTCATGAACCTATC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGAATGTTGTTGGAGGTaGCGGGCCCCAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHECCWR*RAPVKS
Trigger: AGATTTGACTGGGGCCCGGCACCTCCAACAACATTC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAAAGCAGCAGGAGCTaGCAATACAGAAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKSSRS*QYRRLY
Trigger: GTAAAGCCTTCTGTATTGGCAGCTCCTGCTGCTTTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGTCTGTAGACAAGGCTaGCGCTGGTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQVCRQG*RWSLWQ
Trigger: CTGCCACAGGGACCAGCGCCAGCCTTGTCTACAGAC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAACAGCCGCTTGGCTTTaGAGGGGAGGGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQTAAWL*RGGVPL
Trigger: CAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSRGTR*LSSISG
Trigger: GCCACTGATGGAGGACAACCACCTCGTTCCTCTACT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACCACGGAGCCAGGAATaGCTGAGAGGGGCACCAACT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQPRSQE*LRGAPT
Trigger: AGTTGGTGCCCCTCTCAGCCATTCCTGGCTCCGTGG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTTGTTCTCCTGGTTTaGGGACATCCATTCGGCACC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLVLLV*GHPFGT
Trigger: GGTGCCGAATGGATGTCCCCAAACCAGGAGAACAAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRLECC*RCRAPV
Trigger: GACTGGGGCCCGGCACCTCCAACAACATTCAAGCCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATTGAAGCAGTCAATTTaGAAACCCCCAGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLKQSI*KPPGAE
Trigger: TTCTGCTCCTGGGGGTTTCCAAATTGACTGCTTCAA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATGAAGGCCAGATCATaGGCATCAGAGATACCACAA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRMKARS*ASEIPQ
Trigger: TTGTGGTATCTCTGATGCCCATGATCTGGCCTTCAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGTGTGAGATCAGGGTTCCACTACCCACCGGCTCATGGTCTCCTAGACCACTGTGGCGCTGCGAATTTGTaGCTCATATTACAATTCTAT +
Preference number: 4 (lower is better)
Translates to: GVRSGFHYPPAHGLLDHCGAANL*LILQFY
Trigger: ATAGAATTGTAATATGAGCCACAAATTCGCAGCGCC...ACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAGTGGAACCCTGATCTCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHILLSI*GASTEF
Trigger: AAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAAT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTTACCAGGGCAGTCTaGTTTAAACTGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLTRAV*FKLGFP
Trigger: TGGGAAGCCCAGTTTAAATCAGACTGCCCTGGTAAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACGAAGATCACAACAATaGCCACCATGGCACCGGCGA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRRSQQ*PPWHRR
Trigger: TCGCCGGTGCCATGGTGGTCATTGTTGTGATCTTCG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSCFEP*CMATAH
Trigger: GTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGAT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHPCLLL*AALNLD
Trigger: ATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTGGAGTGTCTGGTTTaGGATGAAAAGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLECLV*DEKQAV
Trigger: CACAGCCTGCTTTTCATCTCAAACCAGACACTCCAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATTCCTCAAAGACCTTaGCTGTGCTTCTATCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRIPQRP*LCFYLC
Trigger: GCAAAGATAGAAGCACAGTCAAGGTCTTTGAGGAAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAACTCATACCTTCCCCTaGAAAACACTGGAGTATTGT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRTHTFP*KTLEYC
Trigger: ACAATACTCCAGTGTTTTTCAGGGGAAGGTATGAGT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQEPSGR*NVTRRC
Trigger: GCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACTGGGGTGCAAAGGTTaGGAGAGGAGATTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLGCKG*ERRFGV
Trigger: CACCCCAAATCTCCTCTCTCAACCTTTGCACCCCAG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTGTGGCTGCCATTGTTaGAATGGCCTTCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHCGCHC*NGLHWS
Trigger: GCTCCAATGAAGGCCATTTCAACAATGGCAGCCACA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAAGAGTCTTTTGGTTaGAGGGGCGACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKESFG*RGDLGT
Trigger: GGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACATTGATGGTAACCGTTaGTCGAGCAGGAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHIDGNR*SSRSGA
Trigger: AGCTCCACTCCTGCTCGAGCAACGGTTACCATCAAT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTCCTCAGCATGCAGCTaGTATCACACAGAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSSACS*YHTEAQ
Trigger: CTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCCCCCGGGCTCTGATTaGCCTGCATCTTGCGGCGCG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAPPGSD*PASCGA
Trigger: CGCGCCGCAAGATGCAGGCCAATCAGAGCCCGGGGG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGTCTCTCTTACCCACTaGGTCTGGGTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTVSLTH*VWVLLG
Trigger: GCCCAGAAGAACCCAGACCCAGTGGGTAAGAGAGAC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATCTCATCACTTATTTaGAGACAGCCGGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRISSLI*RQPVSC
Trigger: GCAACTAACCGGCTGTCTCCAAATAAGTGATGAGAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTTCCCCAGTGCTGCTaGAAACTTTCACCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHFPQCC*KLSPKG
Trigger: CCCCTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCGTACTGGATTTCTGTaGAGTGCCTCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHRTGFL*SASILY
Trigger: GTAGAGGATGGAGGCACTCCACAGAAATCCAGTACG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAAGCAAAGAGTCTTTTaGTTGCAGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNKQRVF*LQGRPG
Trigger: CCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGCTCGTTTACCTGTCTaGTGTGTAAGGGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNARLPV*CVRGPL
Trigger: CAAAGGGCCCCTTACACACCAGACAGGTAAACGAGC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGCAAGCTGGTATTCTTaGACAGGAGGTAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRASWYS*TGGRKT
Trigger: TGTTTTTCTACCTCCTGTCCAAGAATACCAGCTTGC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAATTCCCAGATGGGTaGAGCTTCTGGGTAATCTAT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKFPDG*SFWVIY
Trigger: ATAGATTACCCAGAAGCTCCACCCATCTGGGAATTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACTACCCACCGGCTCATaGTCTCCTAGACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLPTGS*SPRPLS
Trigger: TGACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp CCTGTGGCTGAACCAGAGGAAGAGGGTGTGAGATCAGGGTTCCACTACCCACCGTCTATTTTACAGCATTaGTCTGGAGTTTATTCAGAG +
Preference number: 4 (lower is better)
Translates to: PVAEPEEEGVRSGFHYPPSILQH*SGVYSE
Trigger: CTCTGAATAAACTCCAGACCAATGCTGTAAAATAGA...CGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCTGGTTCAGCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAATGCTGTACACCATTaGAGCCTGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHNAVHH*SLCQDL
Trigger: CAGATCCTGACACAGGCTTCAATGGTGTACAGCATT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTGCATCTGTCACTGTaGTTACCCCCACAGTACTAT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLHLSL*LPPQYY
Trigger: ATAGTACTGTGGGGGTAATCACAGTGACAGATGCAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACGAAGATCACAACAATaGCCACCATGGCACCGGCGA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQRRSQQ*PPWHRR
Trigger: TCGCCGGTGCCATGGTGGTCATTGTTGTGATCTTCG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSCFEP*CMATAH
Trigger: GTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCCAAAGGGAGTTCCTaGATCACGTGGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSKGSS*ITWCFF
Trigger: GAAAAAGCACCACGTGATTCAGGAACTCCCTTTGGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAACTAGAACTGTGACCTaGAGCAAATCATTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRTRTVT*SKSFNF
Trigger: GAAGTTGAATGATTTGCTTCAGGTCACAGTTCTAGT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACTGGTCTCGAACTCCTaGGCTCATGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQLVSNS*AHDLPA
Trigger: GGCGGGCAGATCATGAGCTCAGGAGTTCGAGACCAG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGTCACTTTTGCTGTGTaGGTTACACTGTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHVTFAV*VTLSGV
Trigger: CACACCAGACAGTGTAACTCACACAGCAAAAGTGAC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGAGCTGGGACATTTCTaGGGAGTGACAGGAATATTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHELGHF*GVTGIL
Trigger: CAATATTCCTGTCACTCCTCAGAAATGTCCCAGCTC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTTTCTTCATTCTCCTaGATGTGGAAACCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLSSFS*MWKPVE
Trigger: CTCCACGGGTTTCCACATTCAGGAGAATGAAGAAAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACACTGCTTACGGTCATTaGACTGGTTCCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHTAYGH*TGSCCC
Trigger: ACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCACTTACTGTGACCTaGAGTATGGCCGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSLTVT*SMAVLD
Trigger: ATCCAGTACGGCCATACTGCAGGTCACAGTAAGTGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAAGAGTCTTTTGGTTaGAGGGGCGACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKESFG*RGDLGT
Trigger: GGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCACTGCAAAAACTTCTaGTACCACGGAGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHHCKNF*YHGARN
Trigger: ATTCCTGGCTCCGTGGTAGCAGAAGTTTTTGCAGTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGAATGTTGTTGGAGGTaGCGGGCCCCAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTECCWR*RAPVKS
Trigger: AGATTTGACTGGGGCCCGGCACCTCCAACAACATTC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGCAGTATGGCCGTACTaGATTTCTGTGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTAVWPY*ISVECL
Trigger: GAGGCACTCCACAGAAATCCAGTACGGCCATACTGC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAGCAAAGAGTCTTTTaGTTGCAGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKQRVF*LQGRPG
Trigger: CCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSRGTR*LSSISG
Trigger: GCCACTGATGGAGGACAACCACCTCGTTCCTCTACT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTGAACCTTGATGCATaGCGACAGCGCACCAGAACG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLNLDA*RQRTRT
Trigger: CGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCACAGAGGCACAGATTaGTTGCATCCACCGAATCCA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNHRGTD*LHPPNP
Trigger: TGGATTCGGTGGATGCAACCAATCTGTGCCTCTGTG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGATGGGTGGAGCTTCTaGGTAATCTATGGGGACGTA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNDGWSF*VIYGDV
Trigger: TACGTCCCCATAGATTACCCAGAAGCTCCACCCATC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGGTTTGATTACACCATaGATGCCATTACTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRGLITP*MPLLQQ
Trigger: CTGTTGAAGTAATGGCATCCATGGTGTAATCAAACC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAGTCTCCCGAGTAGCTaGGACTACAGGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASLPSS*DYRRAP
Trigger: TGGTGCGCGCCTGTAGTCCCAGCTACTCGGGAGACT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGTGCTTCAGAGACTCTaGGGCGCTCCTTTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCVLQRL*GAPFRL
Trigger: GAGACGGAAAGGAGCGCCTCAGAGTCTCTGAAGCAC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTILLSI*GASTEF
Trigger: AAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAAT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTCCATCAGTGGCTTTaGCATCAAAAGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLHQWL*HQKCRN
Trigger: GTTCCTACACTTTTGATGTCAAAGCCACTGATGGAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAACTTTTATGCCTCCATaGAACTTTAGAATAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRTFMPP*NFRISL
Trigger: GAGGCTTATTCTAAAGTTTCATGGAGGCATAAAAGT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAACAAGAATGTGCAGGTaGGGCATTATATGCATTATT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRTRMCR*GIICII
Trigger: AATAATGCATATAATGCCTCACCTGCACATTCTTGT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAGAGCAACTATCATGTaGCTTCTATACCAACCTTTA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRRATIM*LLYQPL
Trigger: TAAAGGTTGGTATAGAAGTCACATGATAGTTGCTCT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATTAGTAGCCTCCAAATaGCCATATATTTGTTGGATG +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLVASK*PYICWM
Trigger: CATCCAACAAATATATGGTCATTTGGAGGCTACTAA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGAACTCCTGAGCTCATaGTCTGCCCGCCTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQELLSS*SARLPK
Trigger: CTTTGGGAGGCGGGCAGATCATGAGCTCAGGAGTTC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACTCCTGAACTCAAGTaGTCCATCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTPELK*SIRLGL
Trigger: GAGGCCGAGGCGGATGGATCACTTGAGTTCAGGAGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATCTCTAGGTTGTTTTaGTACAGGGTTTTAAGACCT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRISRLF*YRVLRP
Trigger: AGGTCTTAAAACCCTGTATCAAAACAACCTAGAGAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCAGCAATTATCAGAGTaGCCCAAAACCAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHQQLSE*PKTKHS
Trigger: AGAGTGCTTGGTTTTGGGTCACTCTGATAATTGCTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGGAGATTTGGGGTGTTaGTATGGACCCAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQGDLGC*YGPKPG
Trigger: TCCTGGCTTGGGTCCATATCAACACCCCAAATCTCC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATGTGGCTGCCATTGTTaGAATGGCCTTCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTCGCHC*NGLHWS
Trigger: GCTCCAATGAAGGCCATTTCAACAATGGCAGCCACA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGACAGCCGGTTAGTTaGCTCAACCTTTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRQPVS*LNLSPF
Trigger: GAAAGGGGAAAGGTTGAGGCAACTAACCGGCTGTCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACATTACTGCCTATATCTaGATCAGTGGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHITAYI*ISGMEL
Trigger: CAGCTCCATGCCACTGATGCAGATATAGGCAGTAAT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGTTTCCTATGTTCTTTaGAGGTTAACACAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRVSYVL*RLTQGK
Trigger: TTTCCCTTGTGTTAACCTGCAAAGAACATAGGAAAC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGCTTCATTTCATAACTaGTTCTGTGTTTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRASFHN*FCVSVL
Trigger: AAGAACGGAAACACAGAAGCAGTTATGAAATGAAGC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATTGGCTACAACATCTaGTCTTCTATTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRIGYNI*SSIRET
Trigger: TGTTTCCCTAATAGAAGAGCAGATGTTGTAGCCAAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGATAAAATCATACACTaGACACAGTACTGGCTTACT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRDKIIH*TQYWLT
Trigger: AGTAAGCCAGTACTGTGTGCAGTGTATGATTTTATC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTAGACCACTGTCACTaGAGCTTTCCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLDHCH*SFPGSH
Trigger: ATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCATTGGAGCCATACTaGTTACGGTCATTGAACTGG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSLEPY*LRSLNW
Trigger: CCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTCAGTAGCACCTCCTaGTTGCTTATAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLSSTS*LLIRLQ
Trigger: CTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCAATATGCTGGTACCTaGCAGGCATTGACCAACTAT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHQYAGT*QALTNY
Trigger: ATAGTTGGTCAATGCCTGGCAGGTACCAGCATATTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGTCTGTAGACAAGGCTaGCGCTGGTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKVCRQG*RWSLWQ
Trigger: CTGCCACAGGGACCAGCGCCAGCCTTGTCTACAGAC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTCTGTAGACAAGGCTaGCGCTGGTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVCRQG*RWSLWQ
Trigger: CTGCCACAGGGACCAGCGCCAGCCTTGTCTACAGAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTCTGTCAAATACTCTaGAGGCTGTCAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLCQIL*RLSKLL
Trigger: CAGGAGTTTTGACAGCCTCCAGAGTATTTGACAGAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAACAATCACAGCCGCTTaGCTTTGGAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTITITAA*LWRGGV
Trigger: GACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCACAATCACAGCCGCTTaGCTTTGGAGGGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCTITAA*LWRGGV
Trigger: GACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACCACGGAGCCAGGAATaGCTGAGAGGGGCACCAACT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKPRSQE*LRGAPT
Trigger: AGTTGGTGCCCCTCTCAGCCATTCCTGGCTCCGTGG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTGAACCTTGATGCATaGCGACAGCGCACCAGAACG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLNLDA*RQRTRT
Trigger: CGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTTTGCTTGTTCTCCTaGTTTGGGGACATCCATTCG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHFCLFS*FGDIHS
Trigger: CGAATGGATGTCCCCAAACCAGGAGAACAAGCAAAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRLECC*RCRAPV
Trigger: GACTGGGGCCCGGCACCTCCAACAACATTCAAGCCT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAAGTGGGCTGAGAGTTaGGCTGTGCAAAAACAGGTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNKWAES*AVQKQV
Trigger: AACCTGTTTTTGCACAGCCCAACTCTCAGCCCACTT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACTTCTGGGTAATCTATaGGGACGTAAATTCATTACA +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRLLGNL*GRKFIT
Trigger: TGTAATGAATTTACGTCCCCATAGATTACCCAGAAG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGTGAGTTACACTGTCTaGTGTGTAAGGGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTVSYTV*CVRGPL
Trigger: CAAAGGGCCCCTTACACACCAGACAGTGTAACTCAC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGGCGCTGCGACTGTCTaGTGTGTAAGGGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNGAATV*CVRGPL
Trigger: CAAAGGGCCCCTTACACACCAGACAGTCGCAGCGCC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544246.5
3UTR CAA 72 bp GGCCCTGGACTAGCAGCATCAGTACCACCTAGGAACTaGTTAGCAATGTATATTTTCAGTCCTGACCTCAGT +
Preference number: 4 (lower is better)
Translates to: GPGLAASVPPRN*LAMYIFSPDLS
Trigger: ACTGAGGTCAGGACTGAAAATATACATTGCTAACAAGTTCCTAGGTGGTACTGATGCTGCTAGTCCAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTGGAAAGCGGCTGTTaGTCAAAGTGTTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLESGC*SKCFLE
Trigger: TTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQVRICC*WNWKAA
Trigger: AGCCGCTTTCCAATTCCATCAGCAACAGATCCTGAC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTATACCGCCTTCAAATaGAATGGGACCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHYTAFK*NGTSLS
Trigger: TGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCTCCATCAGTGGCTTTaGCATCAAAAGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNLHQWL*HQKCRN
Trigger: GTTCCTACACTTTTGATGTCAAAGCCACTGATGGAG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACGAAGATCACAACAATaGCCACCATGGCACCGGCGA +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQARRSQQ*PPWHRR
Trigger: TCGCCGGTGCCATGGTGGTCATTGTTGTGATCTTCG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCCATTGATAGGTTCATaGACTGCATCATCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNPLIGS*TASSGL
Trigger: CAAACCCGATGATGCAGTTCATGAACCTATCAATGG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTGGAGTGTCTGGTTTaGGATGAAAAGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLECLV*DEKQAV
Trigger: CACAGCCTGCTTTTCATCTCAAACCAGACACTCCAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGGCACTGAAGTGATCTaGACTAGTGGAAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTGTEVI*TSGRAF
Trigger: AAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATCTGAGGCACTGAAGTaGTCTGAACTAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSEALK*SELVEE
Trigger: CTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCATCTGACTTGGCCCTaGAACCCTGTAAACACCCAG +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMHLTWP*NPVNTQ
Trigger: CTGGGTGTTTACAGGGTTTCAGGGCCAAGTCAGATG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCCTGGGGTGTTAATCTaGTTTAGGTTCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNPGVLI*FRFRRE
Trigger: CTCTCTTCTGAACCTAAATCAGATTAACACCCCAGG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACATCAATCATCTATTATaGCTCTCACAGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNINHLL*LSQAPV
Trigger: CACAGGGGCCTGTGAGAGTCATAATAGATGATTGAT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTCCTGGCTAACACGATaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSWLTR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCATCGTGTTAGCCAGGA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAGAAGTCAGGCGGCATaGGGGAGGCTGAGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKRSQAA*GRLSRG
Trigger: TCCTCTACTCAGCCTCCCTCATGCCGCCTGACTTCT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACTGCTTACGGTCATTaGACTGGTTCCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTTAYGH*TGSCCC
Trigger: ACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCCTTTCCGTCTCGCGTaGTCTCCCTCTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAPFRLA*SPSLPS
Trigger: GGAAGGGAGAGAGGGAGAGCACGCGAGACGGAAAGG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGATTTCAGCATTACTaGCTATATCTGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGFQHY*LYLHQW
Trigger: CCACTGATGCAGATATAGGCAGTAATGCTGAAATCC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATTGATGGTAACCGTTaGTCGAGCAGGAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQIDGNR*SSRSGA
Trigger: AGCTCCACTCCTGCTCGAGCAACGGTTACCATCAAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACATTCTCTCCAGCATCTaGATCTGTCACTGTGATTAC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHILSSI*ICHCDY
Trigger: GTAATCACAGTGACAGATGCAGATGCTGGAGAGAAT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAACAAGCACAAGCGTGTaGAAAGACTTAGGGTACCCC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQTSTSV*KDLGYP
Trigger: GGGGTACCCTAAGTCTTTGCACACGCTTGTGCTTGT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAATCTTCCTATACTTTaGTCCTCCAGTTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTNLPIL*SSSSAG
Trigger: GCCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGAATGTTGTTGGAGGTaGCGGGCCCCAGTCAAATCT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMECCWR*RAPVKS
Trigger: AGATTTGACTGGGGCCCGGCACCTCCAACAACATTC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAACTTAAATGCTAGTTaGTCCAGAGCAACTATCATT +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRNLNAS*SRATII
Trigger: AATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAACCCTGAGGAGTGTTaGTCCCAGTATCATACAGAA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNNPEEC*SQYHTE
Trigger: TTCTGTATGATACTGGGAGCAACACTCCTCAGGGTT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGCTCACTGCAAGCTCTaGCTCCTGGATTCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMAHCKL*LLDSSD
Trigger: ATCGCTTGAATCCAGGAGGCAGAGCTTGCAGTGAGC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATCAGAGTTGCCATCTaGTTCAGTCCTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQIRVAI*FSPLVR
Trigger: CCGGACAAGAGGACTGAAGCAGATGGCAACTCTGAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTGGTAGCACCAGTTTaGGGAGAAATCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLVAPV*GEIRSS
Trigger: GCTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGAAGCGTGCATGGACTaGAGGATGCATTATATCTCA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNEACMD*RMHYIS
Trigger: TGAGATATAATGCATCCTCCAGTCCATGCACGCTTC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTCTGTAGACAAGGCTaGCGCTGGTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVCRQG*RWSLWQ
Trigger: CTGCCACAGGGACCAGCGCCAGCCTTGTCTACAGAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTTCCCCAGTGCTGCTaGAAACTTTCACCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQFPQCC*KLSPKG
Trigger: CCCCTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATACGGGAGCATTCTCTaGAATATGCACCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTYGSIL*NMHLHL
Trigger: CAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTATATCTGCATCAGTaGCATGGAGCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLYLHQ*HGAELQ
Trigger: CTGTAATTCAGCTCCATGCCACTGATGCAGATATAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGTTGCAGGGGCGACCTaGGCACCAAAAATGTACCGG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKVAGAT*APKMYR
Trigger: CCGGTACATTTTTGGTGCCCAGGTCGCCCCTGCAAC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTTTTTCACGGAAACTaGAGTGTCTGGTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLFHGN*SVWFEM
Trigger: CATCTCAAACCAGACACTCCAGTTTCCGTGAAAAAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCCCAGGAGCAGAATTTaGCATATCAGGACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNPRSRI*HIRTGF
Trigger: AAAACCTGTCCTGATATGCCAAATTCTGCTCCTGGG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTCAAAGTGTGGGCCCTaGACTAGCAGCATCAGTACC +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSKCGP*TSSIST
Trigger: GGTACTGATGCTGCTAGTCCAGGGCCCACACTTTGA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCCCCTGTGCCTACTGTaGGCTGCATATGGATTACAC +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMPLCLL*AAYGLH
Trigger: GTGTAATCCATATGCAGCCCACAGTAGGCACAGGGG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACCATCTCTTTTATGTTaGAAATTTGAATGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRPSLLC*KFEWVE
Trigger: CTCAACCCATTCAAATTTCCAACATAAAAGAGATGG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGCATTGCAGATAAGTTaGAGGAGGGCCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNALQIS*RRAYTD
Trigger: ATCAGTATAGGCCCTCCTCCAACTTATCTGCAATGC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGAATGTGGAAACCCGTaGAGCTGGGACATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQECGNP*SWDISE
Trigger: CTCAGAAATGTCCCAGCTCCACGGGTTTCCACATTC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTGCTTCAGAGACTCTaGGGCGCTCCTTTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVLQRL*GAPFRL
Trigger: GAGACGGAAAGGAGCGCCTCAGAGTCTCTGAAGCAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGTGGCAGCATTGATGTaGGAAATGTTCAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNVAALM*EMFRSF
Trigger: AAAGGATCTGAACATTTCTCACATCAATGCTGCCAC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAATGCTGTACACCATTaGAGCCTGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQNAVHH*SLCQDL
Trigger: CAGATCCTGACACAGGCTTCAATGGTGTACAGCATT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACTATCTAAGGACCTCTaGACTGTAATCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLSKDL*TVISPV
Trigger: TACTGGGCTGATTACAGTTCAGAGGTCCTTAGATAG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGGCAATCTTTGTATTaGCAGGATCTTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGQSLY*QDLSQI
Trigger: TATCTGAGAAAGATCCTGTCAATACAAAGATTGCCC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCTTACCAGGGCAGTCTaGTTTAAACTGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMLTRAV*FKLGFP
Trigger: TGGGAAGCCCAGTTTAAATCAGACTGCCCTGGTAAG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGGAGCCAGGAATGGCTaGGAGGGGCACCAACTTAAA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKGARNG*EGHQLK
Trigger: TTTAAGTTGGTGCCCCTCTCAGCCATTCCTGGCTCC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGGAGCCAGGAATGGCTaGGAGGGGCACCAACTTAAA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNGARNG*EGHQLK
Trigger: TTTAAGTTGGTGCCCCTCTCAGCCATTCCTGGCTCC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKSCFEP*CMATAH
Trigger: GTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATCCTCTGAGCTGCTTTaGACCTTGATGCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQSSELL*TLMHGD
Trigger: GTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACCATTGATAGGTTCATaGACTGCATCATCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTPLIGS*TASSGL
Trigger: CAAACCCGATGATGCAGTTCATGAACCTATCAATGG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATCTGAGGCACTGAAGTaGTCTGAACTAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSEALK*SELVEE
Trigger: CTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGGGGCCCTTTGTCTTaGAGCCTCCTTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRGPLS*SLLGNC
Trigger: GCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGCTGTACTACCAGCTTaGTCCTTCCCTCCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKAVLPA*SFPPPS
Trigger: AGAAGGGGGAGGGAAGGATCAAGCTGGTAGTACAGC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGCAATACAGACATCTaGCTTGGCCCTGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSNTDI*LGPETL
Trigger: CAGGGTTTCAGGGCCAAGTCAGATGTCTGTATTGCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGAGCTTCCCTGTCTGTaGTGGCATTCATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAELPCL*WHSSGG
Trigger: ACCTCCAGATGAATGCCATCACAGACAGGGAAGCTC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACATCGGTTCAATGACATaGATATATGACACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNIGSMT*IYDTGG
Trigger: CCCTCCTGTGTCATATATTCATGTCATTGAACCGAT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGAAGAGGCTTGGAAGTaGAGGAATTTGATCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNEEAWK*RNLILF
Trigger: AAACAGGATCAAATTCCTTCACTTCCAAGCCTCTTC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGAGGAAGAAATGGACTaGTGTATAAGTGAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNEEEMD*CISEGV
Trigger: AACACCCTCACTTATACATCAGTCCATTTCTTCCTC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACGGCATGAGGGAGGCTaGGTAGAGGACACATACAAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQRHEGG*VEDTYK
Trigger: TTTGTATGTGTCCTCTACTCAGCCTCCCTCATGCCG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTTTCTTCATTCTCCTaGATGTGGAAACCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLSSFS*MWKPVE
Trigger: CTCCACGGGTTTCCACATTCAGGAGAATGAAGAAAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIEPSGR*NVTRRC
Trigger: GCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAAACCAAGCACTCTTaGGTGCACATCTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKTKHS*VHISVA
Trigger: AGCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGGAGATTTGGGGTGTTaGTATGGACCCAAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCGDLGC*YGPKPG
Trigger: TCCTGGCTTGGGTCCATATCAACACCCCAAATCTCC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTGGGGTGCAAAGGTTaGGAGAGGAGATTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLGCKG*ERRFGV
Trigger: CACCCCAAATCTCCTCTCTCAACCTTTGCACCCCAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAACTGCTTACGGTCATTaGACTGGTTCCTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQTAYGH*TGSCCC
Trigger: ACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACGGTTATCTCTTGCGTaGTTCAGAGACTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRLSLA*FRDSEA
Trigger: CGCCTCAGAGTCTCTGAAGCACGCAAGAGATAACCG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGGAAACGTCAGAGTTaGGGTGATGATGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRKRQS*GDDDSL
Trigger: CAGAGAATCATCATCACCGCAACTCTGACGTTTCCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAATTACTGCCTATATCTaGATCAGTGGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTITAYI*ISGMEL
Trigger: CAGCTCCATGCCACTGATGCAGATATAGGCAGTAAT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAAAGAGTCTTTTGGTTaGAGGGGCGACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREKESFG*RGDLGT
Trigger: GGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATTGATGGTAACCGTTaGTCGAGCAGGAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMIDGNR*SSRSGA
Trigger: AGCTCCACTCCTGCTCGAGCAACGGTTACCATCAAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSHISR*WFFFQS
Trigger: ACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTGACCACCAAACGATaGAATCCCACATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLTTKR*NPTSVG
Trigger: ACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGATAGGTTCATGAACTaGATCATCGGGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTDRFMN*IIGFGL
Trigger: GAGTCCAAACCCGATGATGCAGTTCATGAACCTATC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAATCTTCCTATACTTTaGTCCTCCAGTTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQNLPIL*SSSSAG
Trigger: GCCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATCATTGGAGCCATACTaGTTACGGTCATTGAACTGG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSLEPY*LRSLNW
Trigger: CCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTCTCTCTTACCCACTaGGTCTGGGTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVSLTH*VWVLLG
Trigger: GCCCAGAAGAACCCAGACCCAGTGGGTAAGAGAGAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGAAGCGTGCATGGACTaGAGGATGCATTATATCTCA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTEACMD*RMHYIS
Trigger: TGAGATATAATGCATCCTCCAGTCCATGCACGCTTC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGCAGTATGGCCGTACTaGATTTCTGTGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAAVWPY*ISVECL
Trigger: GAGGCACTCCACAGAAATCCAGTACGGCCATACTGC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTTGCAGGGGCGACCTaGGCACCAAAAATGTACCGG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVAGAT*APKMYR
Trigger: CCGGTACATTTTTGGTGCCCAGGTCGCCCCTGCAAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACAGTCTGATTTAAACTaGGCTTCCCAGAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTQSDLN*ASQNQR
Trigger: CCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACTTGTTCTCCTGGTTTaGGGACATCCATTCGGCACC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQALVLLV*GHPFGT
Trigger: GGTGCCGAATGGATGTCCCCAAACCAGGAGAACAAG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTTGTTCTCCTGGTTTaGGGACATCCATTCGGCACC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLVLLV*GHPFGT
Trigger: GGTGCCGAATGGATGTCCCCAAACCAGGAGAACAAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKRLECC*RCRAPV
Trigger: GACTGGGGCCCGGCACCTCCAACAACATTCAAGCCT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATAGAATTCGTCCTGTaGCTGAACCAGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQIEFVL*LNQRKR
Trigger: CCTCTTCCTCTGGTTCAGCCACAGGACGAATTCTAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACCCAACTACCCTACCTaGAGAATGTTCTGTTACATC +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTPNYPT*RMFCYI
Trigger: GATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATCCCTGTGGCAGCATTaGTGTGAGAAATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSLWQH*CEKCSD
Trigger: ATCTGAACATTTCTCACATCAATGCTGCCACAGGGA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQILLSI*GASTEF
Trigger: AAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTGGAAAGCGGCTGTTaGTCAAAGTGTTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLESGC*SKCFLE
Trigger: TTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCAGTGGCATGGAGCTaGATTACAGAGGTACCTACG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASVAWS*ITEVPT
Trigger: CGTAGGTACCTCTGTAATTCAGCTCCATGCCACTGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTCAGTGGCATGGAGCTaGATTACAGAGGTACCTACG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCSVAWS*ITEVPT
Trigger: CGTAGGTACCTCTGTAATTCAGCTCCATGCCACTGA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGTTGTTTTCAGAAACTaGCAGCTCAATTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTVVFRN*QLNYRL
Trigger: CAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAAC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGGAGCCAGGAATGGCTaGGAGGGGCACCAACTTAAA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKGARNG*EGHQLK
Trigger: TTTAAGTTGGTGCCCCTCTCAGCCATTCCTGGCTCC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCGAAGATCACAACAATaGCCACCATGGCACCGGCGA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKRRSQQ*PPWHRR
Trigger: TCGCCGGTGCCATGGTGGTCATTGTTGTGATCTTCG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGAT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIPCLLL*AALNLD
Trigger: ATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGAT +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCPCLLL*AALNLD
Trigger: ATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACTGGAGTGTCTGGTTTaGGATGAAAAGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQLECLV*DEKQAV
Trigger: CACAGCCTGCTTTTCATCTCAAACCAGACACTCCAG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTGTTCTAAAAATTCTTaGCTGAGCCCCAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNCSKNS*LSPRGI
Trigger: TATTCCTCTGGGGCTCAGTCAAGAATTTTTAGAACA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACAACTGCTAACAGGCTaGAAAAGGCCCAGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKQLLTG*KRPREW
Trigger: CCACTCTCTGGGCCTTTTTCAGCCTGTTAGCAGTTG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAATGACATGAATATATaGCACAGGAGGGCATCAACT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNNDMNI*HRRAST
Trigger: AGTTGATGCCCTCCTGTGTCATATATTCATGTCATT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAGGTGTGTTCCCAGCTaGCACACAGAAGGAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRERCVPS*HTEGRL
Trigger: TAGCCTTCCTTCTGTGTGTCAGCTGGGAACACACCT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTGTGAGGAACAATCCTaGAATACGCCTGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMCEEQS*NTPGFT
Trigger: TGTGAACCCAGGCGTATTTCAGGATTGTTCCTCACA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACAGCTCTCAAACTCCTaGACTCAAGTGATCCATCCG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAQLSNS*TQVIHP
Trigger: CGGATGGATCACTTGAGTTCAGGAGTTTGAGAGCTG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGCAAAGTCTAGGAGCTaGTGCCCATTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAAKSRS*CPFALS
Trigger: AGACAAGGCAAATGGGCATCAGCTCCTAGACTTTGC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAAACCAAGCACTCTTaGGTGCACATCTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKTKHS*VHISVA
Trigger: AGCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTGTGGCTGCCATTGTTaGAATGGCCTTCATTGGAGC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCCGCHC*NGLHWS
Trigger: GCTCCAATGAAGGCCATTTCAACAATGGCAGCCACA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCAACATTATTGTATATaGGGATCAACACAGACTCTG +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHQHYCI*GSTQTL
Trigger: CAGAGTCTGTGTTGATCCTCATATACAATAATGTTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAGACAGCCGGTTAGTTaGCTCAACCTTTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRQPVS*LNLSPF
Trigger: GAAAGGGGAAAGGTTGAGGCAACTAACCGGCTGTCT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCAGACAGCCGGTTAGTTaGCTCAACCTTTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCRQPVS*LNLSPF
Trigger: GAAAGGGGAAAGGTTGAGGCAACTAACCGGCTGTCT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGGATTTCAGCATTACTaGCTATATCTGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTGFQHY*LYLHQW
Trigger: CCACTGATGCAGATATAGGCAGTAATGCTGAAATCC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAAAGAGTCTTTTGGTTaGAGGGGCGACCTGGGCACC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIKESFG*RGDLGT
Trigger: GGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSHISR*WFFFQS
Trigger: ACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTGACCACCAAACGATaGAATCCCACATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLTTKR*NPTSVG
Trigger: ACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAACAAGCACAAGCGTGTaGAAAGACTTAGGGTACCCC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTITSTSV*KDLGYP
Trigger: GGGGTACCCTAAGTCTTTGCACACGCTTGTGCTTGT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGATAGGTTCATGAACTaGATCATCGGGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQDRFMN*IIGFGL
Trigger: GAGTCCAAACCCGATGATGCAGTTCATGAACCTATC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTTACCTCCAAATAAGTaGTCAGCAGGCAGAAAAAGT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNLPPNK*SAGRKS
Trigger: ACTTTTTCTGCCTGCTGAGCACTTATTTGGAGGTAA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATGGATCCAGTCTGCCTaGCTGTCACAATCACAACCA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQWIQSA*LSQSQP
Trigger: TGGTTGTGATTGTGACAGGCAGGCAGACTGGATCCA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGAATATTGTCACTTTTaGTGTGTGAGTTACACTGTC +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHEYCHF*CVSYTV
Trigger: GACAGTGTAACTCACACAGCAAAAGTGACAATATTC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR GCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCATCAGAGTTGCCATCTaGTTCAGTCCTCTTGTCCGG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCIRVAI*FSPLVR
Trigger: CCGGACAAGAGGACTGAAGCAGATGGCAACTCTGAT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGTCTCTCTTACCCACTaGGTCTGGGTTCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAVSLTH*VWVLLG
Trigger: GCCCAGAAGAACCCAGACCCAGTGGGTAAGAGAGAC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACTGGTAGCACCAGTTTaGGGAGAAATCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILVAPV*GEIRSS
Trigger: GCTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTGGTAGCACCAGTTTaGGGAGAAATCAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLVAPV*GEIRSS
Trigger: GCTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGAAGCGTGCATGGACTaGAGGATGCATTATATCTCA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQEACMD*RMHYIS
Trigger: TGAGATATAATGCATCCTCCAGTCCATGCACGCTTC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATTTCCCCAGTGCTGCTaGAAACTTTCACCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQFPQCC*KLSPKG
Trigger: CCCCTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACGTACTGGATTTCTGTaGAGTGCCTCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQRTGFL*SASILY
Trigger: GTAGAGGATGGAGGCACTCCACAGAAATCCAGTACG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCGTACTGGATTTCTGTaGAGTGCCTCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCRTGFL*SASILY
Trigger: GTAGAGGATGGAGGCACTCCACAGAAATCCAGTACG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGCAGTATGGCCGTACTaGATTTCTGTGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNAVWPY*ISVECL
Trigger: GAGGCACTCCACAGAAATCCAGTACGGCCATACTGC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAGCAAAGAGTCTTTTaGTTGCAGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKQRVF*LQGRPG
Trigger: CCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCGCCTTCAAATGAAATaGGACCTCTCTTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHRLQMK*DLSFNK
Trigger: TTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACAGTCTGATTTAAACTaGGCTTCCCAGAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQQSDLN*ASQNQR
Trigger: CCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTGAACCTTGATGCATaGCGACAGCGCACCAGAACG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELNLDA*RQRTRT
Trigger: CGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACTTTTTCACGGAAACTaGAGTGTCTGGTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLFHGN*SVWFEM
Trigger: CATCTCAAACCAGACACTCCAGTTTCCGTGAAAAAG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTTTGCTACCACTGCATaGCAGAAAATCTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNFATTA*QKILPF
Trigger: AAATGGCAAGATTTTCTGCCATGCAGTGGTAGCAAA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCACACAGTATCAGCTaGAGAGGATGCACAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASHSIS*RGCTVP
Trigger: AGGGACTGTGCATCCTCTCCAGCTGATACTGTGTGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTACCCACCGGCTCATaGTCTCCTAGACCACTGTCA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLPTGS*SPRPLS
Trigger: TGACAGTGGTCTAGGAGACCATGAGCCGGTGGGTAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTGAGAGAGGAGATTTaGGGTGTTGATATGGACCCA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLREEI*GVDMDP
Trigger: TGGGTCCATATCAACACCCCAAATCTCCTCTCTCAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR CAA 72 bp AAATATTCCTCAAAGACCTTGACTGTGCTTCTATCTTaGCCATTCTTAGCTGTACAGGTGGTCTCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KYSSKTLTVLLS*PFLAVQVVSSP
Trigger: TGGGCTTGAGACCACCTGTACAGCTAAGAATGGCAAAGATAGAAGCACAGTCAAGGTCTTTGAGGAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNILLSI*GASTEF
Trigger: AAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAAT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTGGAAAGCGGCTGTTaGTCAAAGTGTTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLESGC*SKCFLE
Trigger: TTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREVRICC*WNWKAA
Trigger: AGCCGCTTTCCAATTCCATCAGCAACAGATCCTGAC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVRICC*WNWKAA
Trigger: AGCCGCTTTCCAATTCCATCAGCAACAGATCCTGAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGGGCAATCTTTGTATTaGCAGGATCTTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTGQSLY*QDLSQI
Trigger: TATCTGAGAAAGATCCTGTCAATACAAAGATTGCCC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTTACCAGGGCAGTCTaGTTTAAACTGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLTRAV*FKLGFP
Trigger: TGGGAAGCCCAGTTTAAATCAGACTGCCCTGGTAAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGACATTTGACTTTATaGCTCCAGAATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRHLTL*LQNRDP
Trigger: TGGATCCCTATTCTGGAGTCATAAAGTCAAATGTCT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCCTCTGAGCTGCTTTaGACCTTGATGCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSSELL*TLMHGD
Trigger: GTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTGGAGTGTCTGGTTTaGGATGAAAAGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLECLV*DEKQAV
Trigger: CACAGCCTGCTTTTCATCTCAAACCAGACACTCCAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCCAAAGGGAGTTCCTaGATCACGTGGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISKGSS*ITWCFF
Trigger: GAAAAAGCACCACGTGATTCAGGAACTCCCTTTGGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGGCACTGAAGTGATCTaGACTAGTGGAAGAGCGTTT +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCGTEVI*TSGRAF
Trigger: AAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACACGTTAATACTGGTTaGCTGGGCACTTGTATGCAG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAHVNTG*LGTCMQ
Trigger: CTGCATACAAGTGCCCAGTCAACCAGTATTAACGTG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCCAGCACAAGCGACATaGTACCCTAGTGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAPAQAT*YPSAIY
Trigger: GTAGATGGCACTAGGGTATCATGTCGCTTGTGCTGG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCTGGGAGTATCTGTATaGCTCATTGTCAAAATTACT +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNLGVSV*LIVKIT
Trigger: AGTAATTTTGACAATGAGTCATACAGATACTCCCAG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGGAACCAGGGCCATGTaGGGAACAATCCTGAAATAC +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREGTRAM*GTILKY
Trigger: GTATTTCAGGATTGTTCCTCACATGGCCCTGGTTCC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGCATGGACTGGAGGATaGATTATATCTCATCACTTA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTAWTGG*IISHHL
Trigger: TAAGTGATGAGATATAATGCATCCTCCAGTCCATGC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGTTGATAGTTACTTTTaGAGTAGAGGAACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQVDSYF*SRGTRW
Trigger: CCACCTCGTTCCTCTACTGCAAAAGTAACTATCAAC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACACTGCAAAAACTTCTaGTACCACGGAGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIHCKNF*YHGARN
Trigger: ATTCCTGGCTCCGTGGTAGCAGAAGTTTTTGCAGTG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGTGTCAACATCCACTaGAAAAACTTCTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSVNIH*KNFCYH
Trigger: GTGGTAGCAGAAGTTTTTGCAGTGGATGTTGACACT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACTGAGAGTTGGGCTGTaGAAAAACAGGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILRVGL*KNRFSG
Trigger: TCCAGAGAACCTGTTTTTGCACAGCCCAACTCTCAG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACACTGGGAGAGATATATaGAAATATCAGCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNTGRDI*KYQLND
Trigger: GTCATTGAGCTGATATTTGCATATATCTCTCCCAGT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCCACACTATGTCCCTaGCCTGTTTGGTATCCCAAT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASTLCP*PVWYPN
Trigger: ATTGGGATACCAAACAGGGCAGGGACATAGTGTGGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGCCATTACACAGAATaGCTCACCTTAGCACCACAT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSHYTE*LTLAPH
Trigger: ATGTGGTGCTAAGGTGAGGCATTCTGTGTAATGGCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTAGACCACTGTCACTaGAGCTTTCCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLDHCH*SFPGSH
Trigger: ATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTACTTCAATAAGCAATaGACCCCTACCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHYFNKQ*TPTHYF
Trigger: AAAATAATGGGTAGGGGTGCATTGCTTATTGAAGTA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATCTCATCACTTATTTaGAGACAGCCGGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQISSLI*RQPVSC
Trigger: GCAACTAACCGGCTGTCTCCAAATAAGTGATGAGAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCGTACTGGATTTCTGTaGAGTGCCTCCATCCTCTAC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRTGFL*SASILY
Trigger: GTAGAGGATGGAGGCACTCCACAGAAATCCAGTACG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAAGCAAAGAGTCTTTTaGTTGCAGGGGCGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIKQRVF*LQGRPG
Trigger: CCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGCTCAATTACAGGCTaGTTGAAAATTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSSITG*LKIGGL
Trigger: CAACCCACCAATTTTCAACCAGCCTGTAATTGAGCT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISRGTR*LSSISG
Trigger: GCCACTGATGGAGGACAACCACCTCGTTCCTCTACT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTTGTTCTCCTGGTTTaGGGACATCCATTCGGCACC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILVLLV*GHPFGT
Trigger: GGTGCCGAATGGATGTCCCCAAACCAGGAGAACAAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACGAAATCAGAGCCTCTaGGGTAGAACCCAACAATCC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKRNQSL*GRTQQS
Trigger: GGATTGTTGGGTTCTACCCCAGAGGCTCTGATTTCG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGATAGCCAGTTTGAATaGGTGGCCTATCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMDSQFE*VAYPHF
Trigger: GAAATGAGGATAGGCCACCCATTCAAACTGGCTATC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATGTAAACACCCAGACTaGTATAGTGGGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQCKHPD*YSGTKA
Trigger: AGCCTTGGTCCCACTATACCAGTCTGGGTGTTTACA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCGTGATATGTGCTTATaGCACTCTAATCAATCAAAC +
Preference number: 4 (lower is better)
Translates to: PRWVELLGNLWGRKFITNRDMCL*HSNQSN
Trigger: GTTTGATTGATTAGAGTGCCATAAGCACATATCACG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACAGATGGATGTTGGGTaGCAAGAGAAAACCTGCCAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQQMDVG*QEKTCQ
Trigger: TTGGCAGGTTTTCTCTTGCCACCCAACATCCATCTG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTACTTCCGATGTCATTaGCGCACTTGGAAGACCATA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMYFRCH*RTWKTI
Trigger: TATGGTCTTCCAAGTGCGCCAATGACATCGGAAGTA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACATACCAACCTATCTTaGTGTGGTGAGGTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIHTNLS*CGEVRR
Trigger: TCTCCTCACCTCACCACACCAAGATAGGTTGGTATG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCATAGAATTCGTCCTGTaGCTGAACCAGAGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCIEFVL*LNQRKR
Trigger: CCTCTTCCTCTGGTTCAGCCACAGGACGAATTCTAT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTACGGTCATTGAACTaGTTCCTGTTGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLRSLN*FLLLSS
Trigger: AGAAGACAGCAACAGGAACCAGTTCAATGACCGTAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTTAAAGGTTTCCACTaGGGAATGATGCACAAATTG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTFKGFH*GMMHKL
Trigger: CAATTTGTGCATCATTCCTCAGTGGAAACCTTTAAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCCCTGTGGCAGCATTaGTGTGAGAAATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASLWQH*CEKCSD
Trigger: ATCTGAACATTTCTCACATCAATGCTGCCACAGGGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVRICC*WNWKAA
Trigger: AGCCGCTTTCCAATTCCATCAGCAACAGATCCTGAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAGTGGCATGGAGCTaGATTACAGAGGTACCTACG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISVAWS*ITEVPT
Trigger: CGTAGGTACCTCTGTAATTCAGCTCCATGCCACTGA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACTATCTAAGGACCTCTaGACTGTAATCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILSKDL*TVISPV
Trigger: TACTGGGCTGATTACAGTTCAGAGGTCCTTAGATAG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTATACCGCCTTCAAATaGAATGGGACCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMYTAFK*NGTSLS
Trigger: TGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTTACCAGGGCAGTCTaGTTTAAACTGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLTRAV*FKLGFP
Trigger: TGGGAAGCCCAGTTTAAATCAGACTGCCCTGGTAAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTGCATCTGTCACTGTaGTTACCCCCACAGTACTAT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLHLSL*LPPQYY
Trigger: ATAGTACTGTGGGGGTAATCACAGTGACAGATGCAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACCAGGTCACTTATGTTaGCCACCAAACGATGCAATC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKPGHLC*PPNDAI
Trigger: GATTGCATCGTTTGGTGGTCAACATAAGTGACCTGG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCCAGGTCACTTATGTTaGCCACCAAACGATGCAATC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNPGHLC*PPNDAI
Trigger: GATTGCATCGTTTGGTGGTCAACATAAGTGACCTGG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKPCLLL*AALNLD
Trigger: ATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATCTGAGGCACTGAAGTaGTCTGAACTAGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRESEALK*SELVEE
Trigger: CTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGAGAGGGAAAGAGGCTaGCACTTCCTGTTTCAATAT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIERERG*HFLFQY
Trigger: ATATTGAAACAGGAAGTGTCAGCCTCTTTCCCTCTC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACAGGTAACATTTTCTaGGTGTCTGGCTATTGCGAG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTGNIF*VSGYCE
Trigger: CTCGCAATAGCCAGACACTCAGAAAATGTTACCTGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCCAAACTTACAAAGTaGCTCCTAGACCGATCCATC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASKLTK*LLDRSI
Trigger: GATGGATCGGTCTAGGAGTCACTTTGTAAGTTTGGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCTTGCCCTGCGAAATaGACAGGAGTTAATGAAGCA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISCPAK*TGVNEA
Trigger: TGCTTCATTAACTCCTGTTCATTTCGCAGGGCAAGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGACATTTCTGAGGAGTaGCAGGAATATTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQDISEE*QEYCHF
Trigger: AAAGTGACAATATTCCTGTCACTCCTCAGAAATGTC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGTTGTAGAGATCTATTaGATACATAAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTVVEIY*IHKALT
Trigger: CGTCAGAGCTTTATGTATTCAATAGATCTCTACAAC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAGTTTGCACGTGCAACTaGGATCTTATTAACATTAGT +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTVCTCN*DLINIS
Trigger: ACTAATGTTAATAAGATCTCAGTTGCACGTGCAAAC...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCAGGAAACGTCAGAGTTaGGGTGATGATGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCRKRQS*GDDDSL
Trigger: CAGAGAATCATCATCACCGCAACTCTGACGTTTCCT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGACAGCCGGTTAGTTaGCTCAACCTTTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRQPVS*LNLSPF
Trigger: GAAAGGGGAAAGGTTGAGGCAACTAACCGGCTGTCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGCATGGACTGGAGGATaGATTATATCTCATCACTTA +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQAWTGG*IISHHL
Trigger: TAAGTGATGAGATATAATGCATCCTCCAGTCCATGC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATTCTCTCCAGCATCTaGATCTGTCACTGTGATTAC +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMILSSI*ICHCDY
Trigger: GTAATCACAGTGACAGATGCAGATGCTGGAGAGAAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCACTGCAAAAACTTCTaGTACCACGGAGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNHCKNF*YHGARN
Trigger: ATTCCTGGCTCCGTGGTAGCAGAAGTTTTTGCAGTG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTACAAGCACAAGCGTGTaGAAAGACTTAGGGTACCCC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAITSTSV*KDLGYP
Trigger: GGGGTACCCTAAGTCTTTGCACACGCTTGTGCTTGT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGTGCCTACTGTGGGCTaGATATGGATTACACACTTT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIVPTVG*IWITHF
Trigger: AAAGTGTGTAATCCATATGCAGCCCACAGTAGGCAC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATGGCAAGAGAAAACCTaGCAAGGAGTAATGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAWQEKT*QGVMFP
Trigger: GGGAAACATTACTCCTTGGCAGGTTTTCTCTTGCCA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACATTTGGATCCAGTCTaGCTGCCTGTCACAATCACA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKHLDPV*LPVTIT
Trigger: TGTGATTGTGACAGGCAGGCAGACTGGATCCAAATG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATGTGTTGCTTCGGGCTaGCAAATTAGCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKCVASG*QISNSR
Trigger: TCTGGAGTTGCTAATTTGCCAGCCCGAAGCAACACA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTTCCCCAGTGCTGCTaGAAACTTTCACCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKFPQCC*KLSPKG
Trigger: CCCCTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATACGGGAGCATTCTCTaGAATATGCACCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREYGSIL*NMHLHL
Trigger: CAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTACGGGAGCATTCTCTaGAATATGCACCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNYGSIL*NMHLHL
Trigger: CAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACACAGTACTATACTTTaGCAGATTCTCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTHSTIL*QILRHK
Trigger: TTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTTTTGCTTGTTCTCCTaGTTTGGGGACATCCATTCG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCFCLFS*FGDIHS
Trigger: CGAATGGATGTCCCCAAACCAGGAGAACAAGCAAAA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTACAGCTGTCAATAAGTaGGCTGAGAGTTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLATAVNK*AESWAV
Trigger: CACAGCCCAACTCTCAGCCCACTTATTGACAGCTGT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATGGAAGCATTCACTTaGTACCCAGGCCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQMEAFT*YPGLFI
Trigger: AATGAAGAGGCCTGGGTACCAAGTGAATGCTTCCAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTGTCAATGGCAAGCTaGTATTCTTGGACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELSMAS*YSWTGG
Trigger: ACCTCCTGTCCAAGAATACCAGCTTGCCATTGACAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGTGAAAATTCCCAGATaGGTGGAGCTTCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIVKIPR*VELLGN
Trigger: ATTACCCAGAAGCTCCACCCATCTGGGAATTTTCAC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATGCAGAGATGCCTGGTaGTTGCTTCTGAACCATTCA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKCRDAW*LLLNHS
Trigger: TGAATGGTTCAGAAGCAACCACCAGGCATCTCTGCA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTTGTAATGTCCATTTaGATCCAGTCTGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELVMSI*IQSACL
Trigger: CAGGCAGGCAGACTGGATCCAAATGGACATTACAAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTGAGTTACACTGTCTaGTGTGTAAGGGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVSYTV*CVRGPL
Trigger: CAAAGGGCCCCTTACACACCAGACAGTGTAACTCAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGAATGTGGAAACCCGTaGAGCTGGGACATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKECGNP*SWDISE
Trigger: CTCAGAAATGTCCCAGCTCCACGGGTTTCCACATTC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTTGGGGTGTTGATATaGACCCAAGCCAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKFGVLI*TQARRH
Trigger: ATGCCTCCTGGCTTGGGTCCATATCAACACCCCAAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTTTGGGGTGTTGATATaGACCCAAGCCAGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIFGVLI*TQARRH
Trigger: ATGCCTCCTGGCTTGGGTCCATATCAACACCCCAAA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTGCCATTGTTGAAATaGCCTTCATTGGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLPLLK*PSLEPY
Trigger: GTATGGCTCCAATGAAGGCCATTTCAACAATGGCAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTCCCTGTGGCAGCATTaGTGTGAGAAATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSLWQH*CEKCSD
Trigger: ATCTGAACATTTCTCACATCAATGCTGCCACAGGGA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAATGCTGTACACCATTaGAGCCTGTGTCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLANAVHH*SLCQDL
Trigger: CAGATCCTGACACAGGCTTCAATGGTGTACAGCATT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTATCTAAGGACCTCTaGACTGTAATCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLSKDL*TVISPV
Trigger: TACTGGGCTGATTACAGTTCAGAGGTCCTTAGATAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTTGTTTTCAGAAACTaGCAGCTCAATTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVVFRN*QLNYRL
Trigger: CAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTGCATCTGTCACTGTaGTTACCCCCACAGTACTAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLHLSL*LPPQYY
Trigger: ATAGTACTGTGGGGGTAATCACAGTGACAGATGCAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGACATTTGACTTTATaGCTCCAGAATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMRHLTL*LQNRDP
Trigger: TGGATCCCTATTCTGGAGTCATAAAGTCAAATGTCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTCCATCAGTGGCTTTaGCATCAAAAGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLHQWL*HQKCRN
Trigger: GTTCCTACACTTTTGATGTCAAAGCCACTGATGGAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCCAGGTCACTTATGTTaGCCACCAAACGATGCAATC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKPGHLC*PPNDAI
Trigger: GATTGCATCGTTTGGTGGTCAACATAAGTGACCTGG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCCAGGTCACTTATGTTaGCCACCAAACGATGCAATC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIPGHLC*PPNDAI
Trigger: GATTGCATCGTTTGGTGGTCAACATAAGTGACCTGG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCCAAAGGGAGTTCCTaGATCACGTGGTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSKGSS*ITWCFF
Trigger: GAAAAAGCACCACGTGATTCAGGAACTCCCTTTGGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACAGACAAGCACCAGTaGAATAAATTAGACAGCGCT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTDKHQ*NKLDSA
Trigger: AGCGCTGTCTAATTTATTTCACTGGTGCTTGTCTGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTATATTTTCAGTCCTaGCCTCAGTGGTACGAAATC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVYFQS*PQWYEI
Trigger: GATTTCGTACCACTGAGGTCAGGACTGAAAATATAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATATGTTTCTGGTGACTaGCAGCCCAATAGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAYVSGD*QPNRFV
Trigger: TACAAACCTATTGGGCTGTCAGTCACCAGAAACATA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAGCTCCTCAATATCCTaGAAGGGATTAGAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQSSSIS*KGLECF
Trigger: GAAACACTCTAATCCCTTTCAGGATATTGAGGAGCT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCAATCTAAGAGCTTATaGAGGGTTCACTGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMQSKSL*RVHCVH
Trigger: ATGAACACAGTGAACCCTTCATAAGCTCTTAGATTG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAATAAAAGGTTGGGGTaGAGAGGCTTGGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKNKRLG*RGLEVK
Trigger: CTTCACTTCCAAGCCTCTTCACCCCAACCTTTTATT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAAGGCATTCAGGGTGTaGGCATTAAAGAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKKAFRV*ALKRLL
Trigger: AAGCAGTCTCTTTAATGCTCACACCCTGAATGCCTT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCTTTGCATATGCCATaGGCTAAAAGTAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASLHMP*AKSKPA
Trigger: GGCAGGTTTACTTTTAGCTCATGGCATATGCAAAGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATACCATTGCCTAAGTaGGCTGGGTCTGTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAIPLPK*AGSVKV
Trigger: CACCTTTACAGACCCAGCTCACTTAGGCAATGGTAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATGTGCTGTGTGTATGTaGATATGTGAGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQCAVCM*ICECLG
Trigger: ACCAAGACACTCACATATTCACATACACACAGCACA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGGACTGATGTATAAGTaGGGGTGTTCATTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIGLMYK*GCSFCP
Trigger: TGGACAAAATGAACACCCTCACTTATACATCAGTCC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTCACTTTTGCTGTGTaGGTTACACTGTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVTFAV*VTLSGV
Trigger: CACACCAGACAGTGTAACTCACACAGCAAAAGTGAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGAGCTGGGACATTTCTaGGGAGTGACAGGAATATTG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKELGHF*GVTGIL
Trigger: CAATATTCCTGTCACTCCTCAGAAATGTCCCAGCTC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCAGCAATTATCAGAGTaGCCCAAAACCAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNQQLSE*PKTKHS
Trigger: AGAGTGCTTGGTTTTGGGTCACTCTGATAATTGCTG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACAACATTATTGTATATaGGGATCAACACAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQQHYCI*GSTQTL
Trigger: CAGAGTCTGTGTTGATCCTCATATACAATAATGTTG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAGGAAACGTCAGAGTTaGGGTGATGATGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKRKRQS*GDDDSL
Trigger: CAGAGAATCATCATCACCGCAACTCTGACGTTTCCT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTTTCCACAGCAGCATaGATACCATTTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAFSTAA*IPFPSD
Trigger: ATCGGATGGAAATGGTATGCATGCTGCTGTGGAAAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTTTTCCACAGCAGCATaGATACCATTTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCFSTAA*IPFPSD
Trigger: ATCGGATGGAAATGGTATGCATGCTGCTGTGGAAAA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAATTACTGCCTATATCTaGATCAGTGGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREITAYI*ISGMEL
Trigger: CAGCTCCATGCCACTGATGCAGATATAGGCAGTAAT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGGATTTCAGCATTACTaGCTATATCTGCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQGFQHY*LYLHQW
Trigger: CCACTGATGCAGATATAGGCAGTAATGCTGAAATCC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTTGATAGTTACTTTTaGAGTAGAGGAACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVDSYF*SRGTRW
Trigger: CCACCTCGTTCCTCTACTGCAAAAGTAACTATCAAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAGTGTCAACATCCACTaGAAAAACTTCTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQSVNIH*KNFCYH
Trigger: GTGGTAGCAGAAGTTTTTGCAGTGGATGTTGACACT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTGACCACCAAACGATaGAATCCCACATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELTTKR*NPTSVG
Trigger: ACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTTGACCACCAAACGATaGAATCCCACATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLTTKR*NPTSVG
Trigger: ACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAATCTTCCTATACTTTaGTCCTCCAGTTCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAINLPIL*SSSSAG
Trigger: GCCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATTACTTGGTGATAGTTaGCTAAGCCTAAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQLLGDS*LSLSIH
Trigger: GTGGATGCTTAGGCTTAGGCAACTATCACCAAGTAA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGAGGTAGAAAACAAGTaGATGCTGAAAAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIEVENK*MLKSFC
Trigger: GCAGAAGCTTTTCAGCATGCACTTGTTTTCTACCTC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAGCATATACACCTTCTaGAAGAAGTCAGGCGGCATG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASIYTF*KKSGGM
Trigger: CATGCCGCCTGACTTCTTGCAGAAGGTGTATATGCT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTCAGTAGCACCTCCTaGTTGCTTATAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLSSTS*LLIRLQ
Trigger: CTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTGTGTTGCTTCGGGCTaGCAAATTAGCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKCVASG*QISNSR
Trigger: TCTGGAGTTGCTAATTTGCCAGCCCGAAGCAACACA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTGTGTTGCTTCGGGCTaGCAAATTAGCAACTCCAGA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAICVASG*QISNSR
Trigger: TCTGGAGTTGCTAATTTGCCAGCCCGAAGCAACACA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCATCTCATCACTTATTTaGAGACAGCCGGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCISSLI*RQPVSC
Trigger: GCAACTAACCGGCTGTCTCCAAATAAGTGATGAGAT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGAAGCGTGCATGGACTaGAGGATGCATTATATCTCA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNEACMD*RMHYIS
Trigger: TGAGATATAATGCATCCTCCAGTCCATGCACGCTTC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAATTGATGACAGGAGATaGAAACATGGGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIIDDRR*KHGGII
Trigger: GATAATGCCCCCATGTTTCCATCTCCTGTCATCAAT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCATTGATGACAGGAGATaGAAACATGGGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCIDDRR*KHGGII
Trigger: GATAATGCCCCCATGTTTCCATCTCCTGTCATCAAT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTACGGGAGCATTCTCTaGAATATGCACCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIYGSIL*NMHLHL
Trigger: CAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTATATCTGCATCAGTaGCATGGAGCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLYLHQ*HGAELQ
Trigger: CTGTAATTCAGCTCCATGCCACTGATGCAGATATAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAGCTCAATTACAGGCTaGTTGAAAATTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASSITG*LKIGGL
Trigger: CAACCCACCAATTTTCAACCAGCCTGTAATTGAGCT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTCTGTCAAATACTCTaGAGGCTGTCAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLCQIL*RLSKLL
Trigger: CAGGAGTTTTGACAGCCTCCAGAGTATTTGACAGAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTTTGCTTGTTCTCCTaGTTTGGGGACATCCATTCG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREFCLFS*FGDIHS
Trigger: CGAATGGATGTCCCCAAACCAGGAGAACAAGCAAAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACTTTTTCACGGAAACTaGAGTGTCTGGTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQALFHGN*SVWFEM
Trigger: CATCTCAAACCAGACACTCCAGTTTCCGTGAAAAAG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATAAACAAGTACAGATaGGCCATCACCATAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMINKYR*AITIGE
Trigger: TTCACCTATGGTGATGGCCCATCTGTACTTGTTTAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTATAGGTTCAACTTTTaGGGAGGTCAGAAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMYRFNF*GGQKKW
Trigger: CCACTTTTTCTGACCTCCCCAAAAGTTGAACCTATA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGCCAGTTTGAATGGGTaGCCTATCCTCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIASLNG*PILISK
Trigger: TTTTGAAATGAGGATAGGCCACCCATTCAAACTGGC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACGTTCAGCATTTGGTaGATTTCTGAATTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTFSIW*ISEFPQ
Trigger: TTGGGGGAATTCAGAAATCCACCAAATGCTGAACGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGACTCAAATGCAGAGATaGTTGGATAGAGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMTQMQR*LDRETN
Trigger: GTTTGTCTCTCTATCCAACCATCTCTGCATTTGAGT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAATCCTGAAATACGCCTaGGTTCACACAGTATCAGCT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKILKYA*VHTVSA
Trigger: AGCTGATACTGTGTGAACCCAGGCGTATTTCAGGAT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACATTTTCTGAGTGTCTaGCTATTGCGAGCCAGATAT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAHFLSV*LLRARY
Trigger: ATATCTGGCTCGCAATAGCCAGACACTCAGAAAATG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATTCAGAACCATCCTGTaGGTTCTTATTTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQFRTIL*VLISAV
Trigger: CACTGCAGAAATAAGAACCCACAGGATGGTTCTGAA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTGAATGTTAGTCCCTaGATAAAGGAAAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILNVSP*IKENPS
Trigger: GCTGGGGTTTTCCTTTATCCAGGGACTAACATTCAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAACAGGGGTTTTGCATaGAGTAAGCATGGCACCTTA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRENRGFA*SKHGTL
Trigger: TAAGGTGCCATGCTTACTCCATGCAAAACCCCTGTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTTGAGAGAGGAGATTTaGGGTGTTGATATGGACCCA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLREEI*GVDMDP
Trigger: TGGGTCCATATCAACACCCCAAATCTCCTCTCTCAA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTTCACCCATTCTTTCTaGGGTGCAAAGGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNFTHSF*GAKVER
Trigger: TCTCTCAACCTTTGCACCCCAGAAAGAATGGGTGAA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTGCCATTGTTGAAATaGCCTTCATTGGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLPLLK*PSLEPY
Trigger: GTATGGCTCCAATGAAGGCCATTTCAACAATGGCAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAGAATGTTCGAATTTaGATTTGTTTGCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKNVRI*ICLHVQ
Trigger: TTGCACGTGCAAACAAATCCAAATTCGAACATTCTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
3UTR CAA 72 bp TTAAGTAGTGGCATACCAGTATTTGGATTTACTGAGTaGCCATTTGAGACCAAAAGATCATCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: LSSGIPVFGFTE*PFETKRSSGTR
Trigger: CCTGGTTCCTGATGATCTTTTGGTCTCAAATGGCAACTCAGTAAATCCAAATACTGGTATGCCACTACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp ATTCTAAAGGTGCAAAGTCTAGGAGCTGATGCCCATTaGCCTTGTCTACTACATCACCTCAGAAAAATCATT +
Preference number: 4 (lower is better)
Translates to: ILKVQSLGADAH*PCLLHHLRKII
Trigger: AATGATTTTTCTGAGGTGATGTAGTAGACAAGGCAAATGGGCATCAGCTCCTAGACTTTGCACCTTTAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCCCTGTGGCAGCATTaGTGTGAGAAATGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSLWQH*CEKCSD
Trigger: ATCTGAACATTTCTCACATCAATGCTGCCACAGGGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTATCTAAGGACCTCTaGACTGTAATCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILSKDL*TVISPV
Trigger: TACTGGGCTGATTACAGTTCAGAGGTCCTTAGATAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTATACCGCCTTCAAATaGAATGGGACCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNYTAFK*NGTSLS
Trigger: TGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTTGTTTTCAGAAACTaGCAGCTCAATTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVVFRN*QLNYRL
Trigger: CAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTCCATCAGTGGCTTTaGCATCAAAAGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILHQWL*HQKCRN
Trigger: GTTCCTACACTTTTGATGTCAAAGCCACTGATGGAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCCATTGATAGGTTCATaGACTGCATCATCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKPLIGS*TASSGL
Trigger: CAAACCCGATGATGCAGTTCATGAACCTATCAATGG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAATGAAAAGATGGTGTaGGCAATAGTCGTCACACAA +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQANEKMV*AIVVTQ
Trigger: TTGTGTGACGACTATTGCTCACACCATCTTTTCATT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACTTACGAAAGAGTCTaGCTTTTATGCCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTYERV*LLCLHE
Trigger: TTCATGGAGGCATAAAAGTCAGACTCTTTCGTAAGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACCATCATTTAAAACGTaGTATGTGCTTATGGCACTC +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAPSFKT*YVLMAL
Trigger: GAGTGCCATAAGCACATATCACGTTTTAAATGATGG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGGGTGCATTGGAAACTTaGGAATGTGTAACTATTCTA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMGALET*ECVTIL
Trigger: TAGAATAGTTACACATTCTCAAGTTTCCAATGCACC...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGCAGATGAACACAGGTaGGTCGTGAAAAAGATACAA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREADEHR*VVKKIQ
Trigger: TTGTATCTTTTTCACGACTCACCTGTGTTCATCTGC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCAGTAACTTTATCGTaGTGGTTTCAGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISVTLS*WFQLFQ
Trigger: TTGGAACAGCTGAAACCATCACGATAAAGTTACTGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATCTTATTACCCCATTaGAAGATCAAGTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQILLPH*KIKSPA
Trigger: TGCTGGAGACTTGATCTTTCAATGGGGTAATAAGAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAATCCTCACCACAAATTaGTGCCTATCTTTGCATATG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAILTTN*CLSLHM
Trigger: CATATGCAAAGATAGGCATCAATTTGTGGTGAGGAT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAAAACAAGTGCATGCTaGAAAGCTTCTGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQKTSAC*KASAFL
Trigger: AAGGAAAGCAGAAGCTTTTCAGCATGCACTTGTTTT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACTGGCTTACTCAGTTaGATAACTCCTCCTTATTTG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTGLLS*ITPPYL
Trigger: CAAATAAGGAGGAGTTATTCAACTGAGTAAGCCAGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAATTCAGGTAACACGTaGTTGCCAAAGAGGATCTTA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTINSGNT*LPKRIL
Trigger: TAAGATCCTCTTTGGCAATCACGTGTTACCTGAATT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAAAACCAAGCACTCTTaGGTGCACATCTCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKKTKHS*VHISVA
Trigger: AGCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCAGCAATTATCAGAGTaGCCCAAAACCAAGCACTCT +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIQQLSE*PKTKHS
Trigger: AGAGTGCTTGGTTTTGGGTCACTCTGATAATTGCTG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAACCATTTCCATCCGATaGCAATACTGCTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRETISIR*QYCLSL
Trigger: GAGACTTAAGCAGTATTGGCATCGGATGGAAATGGT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACACCATTTCCATCCGATaGCAATACTGCTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNTISIR*QYCLSL
Trigger: GAGACTTAAGCAGTATTGGCATCGGATGGAAATGGT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGCATGGACTGGAGGATaGATTATATCTCATCACTTA +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAAWTGG*IISHHL
Trigger: TAAGTGATGAGATATAATGCATCCTCCAGTCCATGC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAAATTTCCCCAGTGCTaGTGGAAACTTTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKKFPQC*WKLSPK
Trigger: CTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAATTT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAATTTCCCCAGTGCTaGTGGAAACTTTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKFPQC*WKLSPK
Trigger: CTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAATTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTATTACTGCCTATATCTaGATCAGTGGCATGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIITAYI*ISGMEL
Trigger: CAGCTCCATGCCACTGATGCAGATATAGGCAGTAAT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACATTCTCTCCAGCATCTaGATCTGTCACTGTGATTAC +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNILSSI*ICHCDY
Trigger: GTAATCACAGTGACAGATGCAGATGCTGGAGAGAAT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASHISR*WFFFQS
Trigger: ACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSHISR*WFFFQS
Trigger: ACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGACTGGGCACTTGTATaGAGTACTTATAGACCAGTA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKDWALV*STYRPV
Trigger: TACTGGTCTATAAGTACTGCATACAAGTGCCCAGTC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGTGTAATACTCAAATaGAGAGATGGTTGGATAGAG +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSVILK*RDGWIE
Trigger: CTCTATCCAACCATCTCTGCATTTGAGTATTACACT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTACTAGAATACCATTaGCTAAGTGAGCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELLEYH*LSELGL
Trigger: CAGACCCAGCTCACTTAGGCAATGGTATTCTAGTAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCATTTTGTCCATATTTaGATCAGGGTTGTATGTGTG +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMHFVHI*IRVVCV
Trigger: CACACATACAACCCTGATGCAAATATGGACAAAATG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTCAGTAGCACCTCCTaGTTGCTTATAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLSSTS*LLIRLQ
Trigger: CTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCTGTCACTTTGTGAATaGCTGTCTCCTCTCTATCTA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLSLCE*LSPLYL
Trigger: TAGATAGAGAGGAGACAGCCATTCACAAAGTGACAG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCGCCTTCAAATGAAATaGGACCTCTCTTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMRLQMK*DLSFNK
Trigger: TTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCAGTCTGATTTAAACTaGGCTTCCCAGAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAQSDLN*ASQNQR
Trigger: CCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCAGTCTGATTTAAACTaGGCTTCCCAGAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKQSDLN*ASQNQR
Trigger: CCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCTCTGTCAAATACTCTaGAGGCTGTCAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALCQIL*RLSKLL
Trigger: CAGGAGTTTTGACAGCCTCCAGAGTATTTGACAGAG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTCTGTCAAATACTCTaGAGGCTGTCAAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILCQIL*RLSKLL
Trigger: CAGGAGTTTTGACAGCCTCCAGAGTATTTGACAGAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTTTTGCTTGTTCTCCTaGTTTGGGGACATCCATTCG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIFCLFS*FGDIHS
Trigger: CGAATGGATGTCCCCAAACCAGGAGAACAAGCAAAA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATTAATACTGGTTGACTaGGCACTTGTATGCAGTACT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQLILVD*ALVCST
Trigger: AGTACTGCATACAAGTGCCCAGTCAACCAGTATTAA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAAAACAATTTGCATTTaGGGGATCAGTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIKTICI*GISCHL
Trigger: CAGGTGACAACTGATCCCCCAAATGCAAATTGTTTT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGTAACGTTCAGCATTTaGTGGATTTCTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKVTFSI*WISEFP
Trigger: GGGGAATTCAGAAATCCACCAAATGCTGAACGTTAC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTCTGGCATACTGTCTaGATGGCTCAAAAGTCTATT +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAFWHTV*MAQKSI
Trigger: AATAGACTTTTGAGCCATCCAGACAGTATGCCAGAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGCAAACATCTGTCAATaGCAAGCTGGTATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKANICQ*QAGILG
Trigger: TCCAAGAATACCAGCTTGCCATTGACAGATGTTTGC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAGTCTATGGAATAATTaGAAGCAAGAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQSLWNN*KQEPAG
Trigger: ACCTGCTGGTTCTTGCTTCCAATTATTCCATAGACT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTTGAGGCATTTTAGCTaGTTTGATTACACCATGGAT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMLRHFS*FDYTMD
Trigger: ATCCATGGTGTAATCAAACCAGCTAAAATGCCTCAA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGTTCAGAGAGCCATATaGTTATTCCCCAATGACATA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIVQRAI*LFPNDI
Trigger: TATGTCATTGGGGAATAACCATATGGCTCTCTGAAC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAACACTGTATTGTCCCTaGAATGCTCACTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKTLYCP*NAHSDN
Trigger: ATTGTCAGAGTGAGCATTCCAGGGACAATACAGTGT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACACTGCACACAGTACTaGCTTACTCAGTTGAATAAC +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREHCTQY*LTQLNN
Trigger: GTTATTCAACTGAGTAAGCCAGTACTGTGTGCAGTG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGCACATAGTTACACATaGCGATTTATTTGGGGTATG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQAHSYT*RFIWGM
Trigger: CATACCCCAAATAAATCGCCATGTGTAACTATGTGC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTGAGAGAGGAGATTTaGGGTGTTGATATGGACCCA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLREEI*GVDMDP
Trigger: TGGGTCCATATCAACACCCCAAATCTCCTCTCTCAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTTCACCCATTCTTTCTaGGGTGCAAAGGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIFTHSF*GAKVER
Trigger: TCTCTCAACCTTTGCACCCCAGAAAGAATGGGTGAA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTCACCCATTCTTTCTaGGGTGCAAAGGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKFTHSF*GAKVER
Trigger: TCTCTCAACCTTTGCACCCCAGAAAGAATGGGTGAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTGCCATTGTTGAAATaGCCTTCATTGGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILPLLK*PSLEPY
Trigger: GTATGGCTCCAATGAAGGCCATTTCAACAATGGCAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCCCAACTACCCTACCTaGAGAATGTTCTGTTACATC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKPNYPT*RMFCYI
Trigger: GATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR CAA 72 bp TGTTCTATGTTTCTGGTGACTGACAGCCCAATAGGTTaGTATCAAACAAAGGCAAAAAGCATGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSMFLVTDSPIG*YQTKAKSMCSF
Trigger: AAAGGAACACATGCTTTTTGCCTTTGTTTGATACAAACCTATTGGGCTGTCAGTCACCAGAAACATAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp AATGGCTCTCTCCAGTTCTCAGGTTTAAGGGGAATCTaGAGAATTCAACACGCGGTTGATGAATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: NGSLQFSGLRGI*RIQHAVDEFYF
Trigger: AAAATAAAATTCATCAACCGCGTGTTGAATTCTCAAGATTCCCCTTAAACCTGAGAACTGGAGAGAGCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTTAAAGGTTTCCACTaGGGAATGATGCACAAATTG +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIFKGFH*GMMHKL
Trigger: CAATTTGTGCATCATTCCTCAGTGGAAACCTTTAAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTGGCAGCATTGATGTaGGAAATGTTCAGATCCTTT +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVAALM*EMFRSF
Trigger: AAAGGATCTGAACATTTCTCACATCAATGCTGCCAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTTGGAAAGCGGCTGTTaGTCAAAGTGTTTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALESGC*SKCFLE
Trigger: TTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGGGCAATCTTTGTATTaGCAGGATCTTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREGQSLY*QDLSQI
Trigger: TATCTGAGAAAGATCCTGTCAATACAAAGATTGCCC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGGGCAATCTTTGTATTaGCAGGATCTTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNGQSLY*QDLSQI
Trigger: TATCTGAGAAAGATCCTGTCAATACAAAGATTGCCC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTATACCGCCTTCAAATaGAATGGGACCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKYTAFK*NGTSLS
Trigger: TGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTTGTTTTCAGAAACTaGCAGCTCAATTACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVVFRN*QLNYRL
Trigger: CAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAACTAGTGCATTTAAATaGTGTGCCCAGTATCACAGT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRETSAFK*CAQYHS
Trigger: ACTGTGATACTGGGCACATCATTTAAATGCACTAGT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTCAGAGGAGAAAACTaGATTCTCAAGATGCTAAGT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIFRGEN*ILKMLS
Trigger: ACTTAGCATCTTGAGAATTCAGTTTTCTCCTCTGAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTTATCATTAGAGTTTaGCTTTCCCCTCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVIIRV*LSPLLD
Trigger: ATCTAGAAGAGGGGAAAGTCAAACTCTAATGATAAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAATATATTGCTACATTaGACTTCTTACCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTINILLH*TSYLLC
Trigger: GCAGAGCAGGTAAGAAGTTCAATGTAGCAATATATT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGACCATTTCCATCCGATaGCAATACTGCTTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKTISIR*QYCLSL
Trigger: GAGACTTAAGCAGTATTGGCATCGGATGGAAATGGT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTTTCCACAGCAGCATaGATACCATTTCCATCCGAT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKFSTAA*IPFPSD
Trigger: ATCGGATGGAAATGGTATGCATGCTGCTGTGGAAAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAAATTTCCCCAGTGCTaGTGGAAACTTTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIKFPQC*WKLSPK
Trigger: CTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAATTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAAATTTCCCCAGTGCTaGTGGAAACTTTCACCAAAG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKKFPQC*WKLSPK
Trigger: CTTTGGTGAAAGTTTCCAGCAGCACTGGGGAAATTT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTTGATAGTTACTTTTaGAGTAGAGGAACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVDSYF*SRGTRW
Trigger: CCACCTCGTTCCTCTACTGCAAAAGTAACTATCAAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTTGATAGTTACTTTTaGAGTAGAGGAACGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVDSYF*SRGTRW
Trigger: CCACCTCGTTCCTCTACTGCAAAAGTAACTATCAAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGTGTCAACATCCACTaGAAAAACTTCTGCTACCAC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISVNIH*KNFCYH
Trigger: GTGGTAGCAGAAGTTTTTGCAGTGGATGTTGACACT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACCTATATGGCTTAGTTaGAATCTATCAACGATCATG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAPIWLS*NLSTIM
Trigger: CATGATCGTTGATAGATTGCAACTAAGCCATATAGG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAAGATCCAAATAGTCTaGAATCCATTAGCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQKIQIV*NPLAPQ
Trigger: TTGAGGAGCTAATGGATTGCAGACTATTTGGATCTT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACTAATGTGTGTCTTATaGAAAAATCCTTGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQLMCVL*KNPCVF
Trigger: GAACACGCAAGGATTTTTGCATAAGACACACATTAG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATGGTACCAAGGTGAATaGTGTGATCTTCTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREWYQGE*CDLLFT
Trigger: TGTAAAGAGAAGATCACAGCATTCACCTTGGTACCA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAAATTTGTGCAGAGATaGCTGGTGGTTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAKFVQR*LVVASE
Trigger: TTCAGAAGCAACCACCAGGCATCTCTGCACAAATTT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGATATATTCTCCCAGTaGATTGCAGATAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKDIFSQ*IADKLE
Trigger: CTCCAACTTATCTGCAATGCACTGGGAGAATATATC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATTCCATCATCCATATaGACTACACATAGTGGACAA +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQIPSSI*TTHSGQ
Trigger: TTGTCCACTATGTGTAGTGCATATGGATGATGGAAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAACTTCAAGAAAAAGCTaGTGCCTGAAAATAGCTCTC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKTSRKS*CLKIAL
Trigger: GAGAGCTATTTTCAGGCAGCAGCTTTTTCTTGAAGT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATCAGTCAGAGAGAAATaGCATCAGAGCTATTCACAT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKSVREK*HQSYSH
Trigger: ATGTGAATAGCTCTGATGGCATTTCTCTCTGACTGA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATATAACTCACCAAGTTaGCTCTTATTGGTCAGAATG +
Preference number: 4 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAYNSPS*LLLVRM
Trigger: CATTCTGACCAATAAGAGGCAACTTGGTGAGTTATA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGATCTCATCACTTATTTaGAGACAGCCGGTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKISSLI*RQPVSC
Trigger: GCAACTAACCGGCTGTCTCCAAATAAGTGATGAGAT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGATTGATGACAGGAGATaGAAACATGGGGGCATTATC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKIDDRR*KHGGII
Trigger: GATAATGCCCCCATGTTTCCATCTCCTGTCATCAAT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCTATATCTGCATCAGTaGCATGGAGCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALYLHQ*HGAELQ
Trigger: CTGTAATTCAGCTCCATGCCACTGATGCAGATATAG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTATATCTGCATCAGTaGCATGGAGCTGAATTACAG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILYLHQ*HGAELQ
Trigger: CTGTAATTCAGCTCCATGCCACTGATGCAGATATAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCTGTCACTTTGTGAATaGCTGTCTCCTCTCTATCTA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALSLCE*LSPLYL
Trigger: TAGATAGAGAGGAGACAGCCATTCACAAAGTGACAG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCTGTCACTTTGTGAATaGCTGTCTCCTCTCTATCTA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLSLCE*LSPLYL
Trigger: TAGATAGAGAGGAGACAGCCATTCACAAAGTGACAG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTCTCTAACAAATATTaGTTGTCATATACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVSNKY*LSYTAF
Trigger: GAAGGCGGTATATGACAACCAATATTTGTTAGAGAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGTCTCTAACAAATATTaGTTGTCATATACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCVSNKY*LSYTAF
Trigger: GAAGGCGGTATATGACAACCAATATTTGTTAGAGAC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGCTCAATTACAGGCTaGTTGAAAATTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISSITG*LKIGGL
Trigger: CAACCCACCAATTTTCAACCAGCCTGTAATTGAGCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAGCTCAATTACAGGCTaGTTGAAAATTGGTGGGTTG +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSSITG*LKIGGL
Trigger: CAACCCACCAATTTTCAACCAGCCTGTAATTGAGCT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACACAGTACTATACTTTaGCAGATTCTCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIHSTIL*QILRHK
Trigger: TTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTTTTTCACGGAAACTaGAGTGTCTGGTTTGAGATG +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILFHGN*SVWFEM
Trigger: CATCTCAAACCAGACACTCCAGTTTCCGTGAAAAAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGTTCCATATGAACATTaGAATACCCATAGGAGAACT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIVPYEH*NTHRRT
Trigger: AGTTCTCCTATGGGTATTCCAATGTTCATATGGAAC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAAAGCCTTGTTGGAATaGATAATGTTGTCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMKALLE*IMLSFS
Trigger: TGAAAACGACAACATTATCCATTCCAACAAGGCTTT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAAATGCAGAGATGGTTaGATAGAGAGACAAACTATA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMKCRDG*IERQTI
Trigger: TATAGTTTGTCTCTCTATCCAACCATCTCTGCATTT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATCAAAAGGTATTTTTaGGGTACTACCGTAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQIKRYF*GTTVVC
Trigger: ACACACTACGGTAGTACCCCAAAAATACCTTTTGAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTGTCCCTGCCCTGTTTaGTATCCCAATGCTATAAAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLACPCPV*YPNAIK
Trigger: TTTTATAGCATTGGGATACCAAACAGGGCAGGGACA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCATCCACAGAACAGTTaGAAAGATCCTTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMHPQNS*KDPFRF
Trigger: AAATCTAAAAGGATCTTTCCAACTGTTCTGTGGATG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATATACTGATCTTAGCTaGCAAATTTGTGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQYTDLS*QICAEM
Trigger: CATCTCTGCACAAATTTGCCAGCTAAGATCAGTATA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTTTTCAAATCCCAACTaGGAATTCTATCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMFSNPN*EFYQKT
Trigger: AGTCTTCTGATAGAATTCCCAGTTGGGATTTGAAAA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGCAATAGGGTTATCTaGCTCTGTCTACAAAAATTA +
Preference number: 4 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMSNRVI*LCLQKL
Trigger: TAATTTTTGTAGACAGAGCCAGATAACCCTATTGCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTACGGTCATTGAACTaGTTCCTGTTGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKLRSLN*FLLLSS
Trigger: AGAAGACAGCAACAGGAACCAGTTCAATGACCGTAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTTACGGTCATTGAACTaGTTCCTGTTGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILRSLN*FLLLSS
Trigger: AGAAGACAGCAACAGGAACCAGTTCAATGACCGTAA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR CAA 72 bp ATTCAAGATAATATCCACACTATGTCCCTGCCCTGTTaGGTATCCCAATGCTATAAAATGGATATCACATCT +
Preference number: 4 (lower is better)
Translates to: IQDNIHTMSLPC*VSQCYKMDITS
Trigger: AGATGTGATATCCATTTTATAGCATTGGGATACCAAACAGGGCAGGGACATAGTGTGGATATTATCTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp CTGCCAATACAGAAGGCTTTACCAGAACATACATCTTaGATACGAGTAGTTGGAGGAATATCCATAGAAAAA +
Preference number: 4 (lower is better)
Translates to: LPIQKALPEHTS*IRVVGGISIEK
Trigger: TTTTTCTATGGATATTCCTCCAACTACTCGTATCAAAGATGTATGTTCTGGTAAAGCCTTCTGTATTGGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGACATTTGACTTTATaGCTCCAGAATAGGGATCCA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRHLTL*LQNRDP
Trigger: TGGATCCCTATTCTGGAGTCATAAAGTCAAATGTCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAACTGGAGTATTGTTCTaGAAGCCAACACAATGTATT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKTGVLF*KPTQCI
Trigger: AATACATTGTGTTGGCTTTCAGAACAATACTCCAGT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTACATTGCCACCTTTCTaGTTTTATGGTGAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLATLPPF*FYGEVG
Trigger: ACCAACTTCACCATAAAATCAGAAAGGTGGCAATGT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCATTAGCTGGTGTTTaGCATCTACTTTCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASLAGV*HLLSRH
Trigger: ATGCCTTGAAAGTAGATGTCAAACACCAGCTAATGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTAAGTGTTTGTAATTaGAAGTCAGTCTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELSVCN*KSVCLS
Trigger: AGACAAGCAGACTGACTTTCAATTACAAACACTTAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATTTGGCACTCTTCCATaGAAATCTGCTAAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREFGTLP*KSAKKR
Trigger: TCTCTTTTTAGCAGATTTTCATGGAAGAGTGCCAAA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGTGTATGTGAATATGTaGGTGTCTTGGTATATTTCC +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKVYVNM*VSWYIS
Trigger: GGAAATATACCAAGACACTCACATATTCACATACAC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTTGTAGAGATCTATTaGATACATAAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVVEIY*IHKALT
Trigger: CGTCAGAGCTTTATGTATTCAATAGATCTCTACAAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTGCTTGAGATTGTTTaGACAATGTGTGTCAAGACA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVLEIV*TMCVKT
Trigger: TGTCTTGACACACATTGTTCAAACAATCTCAAGCAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGCATGGACTGGAGGATaGATTATATCTCATCACTTA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKAWTGG*IISHHL
Trigger: TAAGTGATGAGATATAATGCATCCTCCAGTCCATGC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAATAACAGATGGTCCTaGAAGAATAGTTTAAACCCT +
Preference number: 4 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQNNRWS*KNSLNP
Trigger: AGGGTTTAAACTATTCTTGCAGGACCATCTGTTATT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCACAGTACTATACTTTaGCAGATTCTCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNHSTIL*QILRHK
Trigger: TTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAATAAAAGGTATCTTTaGCTGTACTACCAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTINKRYL*LYYQLD
Trigger: ATCAAGCTGGTAGTACAGCCAAAGATACCTTTTATT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCTTACAAACCCAAATaGAAAGATAGCCAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISYKPK*KDSQFE
Trigger: TTCAAACTGGCTATCTTTCCATTTGGGTTTGTAAGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACCTGCAAATAACAGATaGTCCTGCAAGAATAGTTTA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREPANNR*SCKNSL
Trigger: TAAACTATTCTTGCAGGACCATCTGTTATTTGCAGG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAAATTACTGAGAAAATaGGACCCACAGACATCTCTA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKKLLRK*DPQTSL
Trigger: TAGAGATGTCTGTGGGTCCCATTTTCTCAGTAATTT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATTGCACTGAGAGGGTaGTTAAGTTCAACAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAIALRG*LSSTRS
Trigger: ACTTCTTGTTGAACTTAACCACCCTCTCAGTGCAAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATGTAAGCCACCACACTaGCATTTACAAAATACTGTT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKCKPPH*HLQNTV
Trigger: AACAGTATTTTGTAAATGCCAGTGTGGTGGCTTACA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCATCTTTTGCCATTTaGAGGAAACTGAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASSFAI*RKLKGE
Trigger: TTCTCCTTTCAGTTTCCTTCAAATGGCAAAAGATGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAATTCTGGATTTGGTTaGAATATGAGTTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLANSGFG*NMSFSA
Trigger: GGCTGAGAAACTCATATTTCAACCAAATCCAGAATT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR TCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTTTGCACGTGCAACTaGGATCTTATTAACATTAGT +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVCTCN*DLINIS
Trigger: ACTAATGTTAATAAGATCTCAGTTGCACGTGCAAAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTTTAGCAACCATAGCTaGAACATAATTGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAFSNHS*NIIAVT
Trigger: TGTGACTGCAATTATGTTGCAGCTATGGTTGCTAAA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAACATTAGTTAACATTTaGCCCCTTCACTTTCAATTG +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKTLVNI*PLHFQL
Trigger: CAATTGAAAGTGAAGGGGGCAAATGTTAACTAATGT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAATGGAAGGCCAAAATaGGTCTTGAATTTTATAGCT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKNGRPK*VLNFIA
Trigger: AGCTATAAAATTCAAGACGCATTTTGGCCTTCCATT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGAATTCAACATATTTTaGTACCACTGCATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAEFNIF*YHCMAE
Trigger: TTCTGCCATGCAGTGGTAGCAAAATATGTTGAATTC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATTGGATTTACTGAGTTaGCATTTGAGACCAAAAGAT +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKLDLLS*HLRPKD
Trigger: ATCTTTTGGTCTCAAATGGCAACTCAGTAAATCCAA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTTACTTCAACAGGGATaGTTTCCAGTCTATGGAATA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALLQQG*FPVYGI
Trigger: TATTCCATAGACTGGAAAGCATCCCTGTTGAAGTAA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACAAACATGTACTATATaGCATGCTACAATCCTTGTA +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREQTCTI*HATILV
Trigger: TACAAGGATTGTAGCATGGCATATAGTACATGTTTG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAATGTGTTTAACATTTTaGCTGATTAGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREMCLTF*LIRSMS
Trigger: AGACATGGACCTAATCAGGCAAAATGTTAAACACAT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACAACGTTTATATCATTaGATTGGTTCCTTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREQRLYH*IGSLKY
Trigger: GTACTTCAAGGAACCAATGCAATGATATAAACGTTG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGTGGGTTCTTATTTCTaGAGTGTTGTGAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAVGSYF*SVVKKM
Trigger: CATTTTCTTCACAACACTGCAGAAATAAGAACCCAC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACAATATGGAAAGCTGTaGATCCATAACTCTCTATTT +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREQYGKL*IHNSLF
Trigger: AAATAGAGAGTTATGGATGCACAGCTTTCCATATTG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCAAGAAAAAGCTGCTaGCTGAAAATAGCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASRKSC*LKIALK
Trigger: TTTGAGAGCTATTTTCAGGCAGCAGCTTTTTCTTGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAATTGATGCCTATCTTTaGATATGCCATGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: KSKRMNLNASCSRATIIKIDAYL*ICHELK
Trigger: TTTTAGCTCATGGCATATGCAAAGATAGGCATCAAT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGGCAGAAATTTCCAATaGTCAGACTATTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREGRNFQ*SDYLIW
Trigger: CCAAATTAAATAGTCTGAGCATTGGAAATTTCTGCC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGAATATTGTCACTTTTaGTGTGTGAGTTACACTGTC +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIEYCHF*CVSYTV
Trigger: GACAGTGTAACTCACACAGCAAAAGTGACAATATTC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR GCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGATCAACACAGACTCTaGCATTTCAACAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKDQHRL*HFNKVV
Trigger: TACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGATCAACACAGACTCTaGCATTTCAACAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIDQHRL*HFNKVV
Trigger: TACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR GCA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTACTTCAATAAGCAATaGACCCCTACCCATTATTTT +
Preference number: 4 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNYFNKQ*TPTHYF
Trigger: AAAATAATGGGTAGGGGTGCATTGCTTATTGAAGTA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCGCCTTCAAATGAAATaGGACCTCTCTTTCAATAAA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRLQMK*DLSFNK
Trigger: TTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTCTCTAACAAATATTaGTTGTCATATACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVSNKY*LSYTAF
Trigger: GAAGGCGGTATATGACAACCAATATTTGTTAGAGAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCACAGTACTATACTTTaGCAGATTCTCAGACACAAA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIHSTIL*QILRHK
Trigger: TTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
3UTR CAA 72 bp ATTTATCTTACAAACCCAAATGGAAAGATAGCCAGTTaGAATGGGTGGCCTATCCTCATTTCAAAAATCTGT +
Preference number: 4 (lower is better)
Translates to: IYLTNPNGKIAS*NGWPILISKIC
Trigger: ACAGATTTTTGAAATGAGGATAGGCCACCCATTCAAACTGGCTATCTTTCCATTTGGGTTTGTAAGATAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp ATGCCTCAGAAAATTCTACTGATTCTGCCACTATTCTaGTCTATCAGAGACAAACTGTCTATAGGACAAAAA +
Preference number: 4 (lower is better)
Translates to: MPQKILLILPLF*SIRDKLSIGQK
Trigger: TTTTTGTCCTATAGACAGTTTGTCTCTGATAGACAAGAATAGTGGCAGAATCAGTAGAATTTTCTGAGGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp ACAACTTTATATGGATTTGGCATGATTACACCCATTTaGCAGACAAGGAAAGCAAGGACTAGTGCATTTAAA +
Preference number: 4 (lower is better)
Translates to: TTLYGFGMITPI*QTRKARTSAFK
Trigger: TTTAAATGCACTAGTCCTTGCTTTCCTTGTCTGCAAAATGGGTGTAATCATGCCAAATCCATATAAAGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
3UTR CAA 72 bp TGTGTAAGTATTATATATCTTTCCTACCTCTCAGTATaGGCTACAACATCTGCTCTTCTATTAGGGAAACAC +
Preference number: 4 (lower is better)
Translates to: CVSIIYLSYLSV*ATTSALLLGKH
Trigger: GTGTTTCCCTAATAGAAGAGCAGATGTTGTAGCCAATACTGAGAGGTAGGAAAGATATATAATACTTACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATGTCTAGAACAAAATaGTGTGCTACAAATACACAC +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAMSRTK*CATNTH
Trigger: GTGTGTATTTGTAGCACAGCATTTTGTTCTAGACAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR GCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTGTCATAATGCTATGTaGTCAGTGGCAAAATTTGTA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLACHNAM*SVAKFV
Trigger: TACAAATTTTGCCACTGAGCACATAGCATTATGACA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAGAAGACTTCCTATATaGCTTAGTTGCAATCTATCA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLARRLPI*LSCNLS
Trigger: TGATAGATTGCAACTAAGCCATATAGGAAGTCTTCT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATGCTTTCCAGTCTATaGAATAATTGGAAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAMLSSL*NNWKQE
Trigger: TTCTTGCTTCCAATTATTCCATAGACTGGAAAGCAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CCA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAAGAATGTTCGAATTTaGATTTGTTTGCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIKNVRI*ICLHVQ
Trigger: TTGCACGTGCAAACAAATCCAAATTCGAACATTCTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS TCA 90 bp CCTAGACCACTGTCACTGCAGCTTTCCTGGGAGCCATCAGGGAGATaGAACGTAACACGGCGCTGCGACTGTCTGGTGTGTAAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PRPLSLQLSWEPSGR*NVTRRCDCLVCKGP
Trigger: GGGCCCCTTACACACCAGACAGTCGCAGCGCCGTGTTACGTTTCATCTCCCTGATGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544246.5
CDS-3UTR CAA 90 bp CAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTCCTGTGGCTGAACCATCTGCTTCAGTCCTCTaGTCCGGAGAGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: QSSCPERPGHRIRPVAEPSASVL*SGEAWS
Trigger: TGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGA...TGGTTCAGCCACAGGACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS TCA 90 bp TTCTCCTGGTTTGGGGACATCCATTCGGCACCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGATGCATGGCGACAGCGCACCAGAACG +
Preference number: 5 (lower is better)
Translates to: FSWFGDIHSAPCLLL*AALNLDAWRQRTRT
Trigger: CGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATGTCCCCAAACCAGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGACATCCATTCGGCACCTaGCTTGCTCCTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRHPFGT*LAPLSC
Trigger: GCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATG...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS TCA 90 bp CATCCATTCGGCACCTTGCTTGCTCCTCTGAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCACCAGAACGGTGACGAAGATCACAAC +
Preference number: 5 (lower is better)
Translates to: HPFGTLLAPLSCFEP*CMATAHQNGDEDHN
Trigger: GTTGTGATCTTCGTCACCGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp CGGGTGACAGTTGCCCGAAAAATTCCTAATCGGTTATCTCTTGCGTaGTTCAGAGACTCTGAGGCGCTCCTTTCCGTCTCGCGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: RVTVARKIPNRLSLA*FRDSEALLSVSRAL
Trigger: GAGAGCACGCGAGACGGAAAGGAGCGCCTCAGAGTCTCTGAAGCACGCAAGAGATAACCGATTAGGAATTTTTCGGGCAACTGTCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGCTTGTTCTCCTGGTTaGGGGACATCCATTCGGCAC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRACSPG*GTSIRH
Trigger: GTGCCGAATGGATGTCCCCAAACCAGGAGAACAAGC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS GCA 90 bp GTGCTTGGCCAGGTCAGGACTGTTAGGCTTGAATGTTGTTGGAGGTaGCGGGCCCCAGTCAAATCTTCCTATACTTTGCTCCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: VLGQVRTVRLECCWR*RAPVKSSYTLLLQF
Trigger: GAACTGGAGGAGCAAAGTATAGGAAGATTTGACTGGGGCCCGGCACCTCCAACAACATTCAAGCCTAACAGTCCTGACCTGGCCAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAAGCAAAGAGTCTTTaGGTTGCAGGGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKAKSL*VAGATW
Trigger: CCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTTGTCCGGAGAGGCGAGTTGGGATCAGAGTaGCCATCTGCTTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: IRVGIRVAICFSPLVRRGELGSE*PSASVL
Trigger: GAGGACTGAAGCAGATGGCAACTCTGATCCCAACTC...GCCTCTCCGGACAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CAA 90 bp GGGGACCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCCAAAACCAAGCACTCTaGAGTGCACATCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GDPKAHQSWDQSCHLLQSQNQAL*SAHLCS
Trigger: GCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTTG...GGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGGGGAGGGGTCCCATaGTCCCTGGCAGTTACTGTA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHRGGVP*SLAVTV
Trigger: TACAGTAACTGCCAGGGACAATGGGACCCCTCCCCT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCTGCTTCAGTCCTCTaGTCCGGAGAGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSASVL*SGEAWS
Trigger: TGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CCCAAAGGCCCATCAGAGTTGGGATCAGAGTTGCCATCTGCTTCAGTCCTCTTGAAAGGCCCATCAGAGTaGGGATCAGAGTTGCCATCT +
Preference number: 5 (lower is better)
Translates to: PKGPSELGSELPSASVLLKGPSE*GSELPS
Trigger: AGATGGCAACTCTGATCCCAACTCTGATGGGCCTTT...CAAGAGGACTGAAGCAGATGGCAACTCTGATCCCAACTCTGATGGGCCTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CAA 90 bp CAGTCCTCTTGTCCGGAGAGGCCTGGTCATAGAATTCGTCCTGTGGCTGAACCACACGGCGCTGCGAATTaGTGGCTCATATTACAATTC +
Preference number: 5 (lower is better)
Translates to: QSSCPERPGHRIRPVAEPHGAAN*WLILQF
Trigger: GAATTGTAATATGAGCCACAAATTCGCAGCGCCGTG...TGGTTCAGCCACAGGACGAATTCTATGACCAGGCCTCTCCGGACAAGAGGACTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS TCA 90 bp CACAAGCTTGTCCTTCTTCACCCATTCTTTCTGGGGTGCAAAGGTTaGGAGAGGAGATTTGGGGTGTTGATATGGACCCAAGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: HKLVLLHPFFLGCKG*ERRFGVLIWTQARR
Trigger: CCTCCTGGCTTGGGTCCATATCAACACCCCAAATCTCCTCTCTCAACCTTTGCACCCCAGAAAGAATGGGTGAAGAAGGACAAGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS GCA 90 bp ATTAGGAGGGTTATCATTTACATCGGTGACATTGATGGTAACCGTTaGTCGAGCAGGAGTGGAGCTGCCGTCACTAGCCAGCACTGTCAC +
Preference number: 5 (lower is better)
Translates to: IRRVIIYIGDIDGNR*SSRSGAAVTSQHCH
Trigger: GTGACAGTGCTGGCTAGTGACGGCAGCTCCACTCCTGCTCGAGCAACGGTTACCATCAATGTCACCGATGTAAATGATAACCCTCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp AATGTTGTTGGAGGTGCCGGGCCCCAGTCAAATCTTCCTATACTTTaGTCCTCCAGTTCAGCCGGCAGGCTTATTGTCCCATTGATAGGT +
Preference number: 5 (lower is better)
Translates to: NVVGGAGPQSNLPIL*SSSSAGRLIVPLIG
Trigger: ACCTATCAATGGGACAATAAGCCTGCCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATTTGACTGGGGCCCGGCACCTCCAACAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CCA 90 bp TTTGTAGTGCTTGGCCAGGTCAGGACTGTTAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTCAAATCTTCCTATACTTTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FVVLGQVRTVRLECC*RCRAPVKSSYTLLL
Trigger: GAGGAGCAAAGTATAGGAAGATTTGACTGGGGCCCGGCACCTCCAACAACATTCAAGCCTAACAGTCCTGACCTGGCCAAGCACTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACACAGCCGCTTGGCTTaGGAGGGGAGGGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQHSRLA*EGRGPI
Trigger: AATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAATCTTCCTATACTTaGCTCCTCCAGTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKSSYT*LLQFSR
Trigger: CCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATATTCTCCCAGTGCATaGCAGATAAGTTGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRYSPSA*QISWRR
Trigger: CCTCCTCCAACTTATCTGCAATGCACTGGGAGAATA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATCTTGTAATGTCCATTaGGATCCAGTCTGCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRSCNVH*DPVCLP
Trigger: AGGCAGGCAGACTGGATCCAAATGGACATTACAAGA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACAAAGAGTCTTTTGGTaGCAGGGGCGACCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTQRVFW*QGRPGH
Trigger: GTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCACAGCCGCTTGGCTTaGGAGGGGAGGGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMHSRLA*EGRGPI
Trigger: AATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAACAATCACAGCCGCTaGGCTTTGGAGGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTNNHSR*ALEGRG
Trigger: ACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATGGTTGACTGGGCACTaGTATGCAGTACTTATAGAC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRWLTGH*YAVLID
Trigger: GTCTATAAGTACTGCATACAAGTGCCCAGTCAACCA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGTAATTCACACTGTATaGTCCCTGGAATGCTCACTC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRVIHTV*SLECSL
Trigger: GAGTGAGCATTCCAGGGACAATACAGTGTGAATTAC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATCTGCTTCAGTCCTCTaGTCCGGAGAGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSASVL*SGEAWS
Trigger: TGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp TTTGTCTTGAAGCCTCCTTGGGAACTGCACTCTGAGGCACTGAAGTaGTCTGAACTAGTGGAAGAGCGTTTAGAAAGGGTGTCACAACCC +
Preference number: 5 (lower is better)
Translates to: FVLKPPWELHSEALK*SELVEERLERVSQP
Trigger: GGGTTGTGACACCCTTTCTAAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTTCAAGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGCCTGAAGAAATCATaGGGGAGGATCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSLKKS*GRITTS
Trigger: TGAGGTGGTGATCCTCCCCAATGATTTCTTCAGGCT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACAGAGGAACGAGGTGGTaGTCCTCCATCAGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNRGTRW*SSISGF
Trigger: AAAGCCACTGATGGAGGACAACCACCTCGTTCCTCT...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACATCCATTCGGCACCTaGCTTGCTCCTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQHPFGT*LAPLSC
Trigger: GCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKGPFV*KPPWEL
Trigger: CAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAACTGTGCTTCTATCTTaGCCATTCTTAGCTGTACAG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRTVLLS*PFLAVQ
Trigger: CTGTACAGCTAAGAATGGCAAAGATAGAAGCACAGT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATATGTAGCTGTGTATTaGAAAGTCCTCAGCATGCAG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRYVAVY*KVLSMQ
Trigger: CTGCATGCTGAGGACTTTCAAATACACAGCTACATA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAATGATTACACCCATTTaGCAGACAAGGAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRMITPI*QTRKAR
Trigger: CCTTGCTTTCCTTGTCTGCAAAATGGGTGTAATCAT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS GCA 90 bp GTCATGTGGCTGCCATTGTTGAAATGGCCTTCATTGGAGCCATACTaGTTACGGTCATTGAACTGGTTCCTGTTGCTGTCTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VMWLPLLKWPSLEPY*LRSLNWFLLLSSFQ
Trigger: CTGGAAAGAAGACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAACAATGGCAGCCACATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTCTGGTAGCACCAGTTaGGGGAGAAATCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSGSTS*GRNQKQ
Trigger: CTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAGA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGCAGTTAGGAATGATTaGTTCCAACACATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRAVRND*FQHIES
Trigger: GCTTTCTATGTGTTGGAACAAATCATTCCTAACTGC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGAATGATGCACAAATaGCAAGAGGAAGCGTGCATG +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGMMHK*QEEACM
Trigger: CATGCACGCTTCCTCTTGCAATTTGTGCATCATTCC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAGTGTAAATAAGTTCTaGAGCTATTGCGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRSVNKF*SYCGIQ
Trigger: CTGGATTCCGCAATAGCTCAAGAACTTATTTACACT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATTCTCTATCCAAGTTTaGCTGAACAATCAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRFSIQV*LNNQLW
Trigger: CCACAACTGATTGTTCAGCAAAACTTGGATAGAGAA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAAGCAAAGAGTCTTTaGGTTGCAGGGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKAKSL*VAGATW
Trigger: CCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAGGGCAATCTTTGTATaGACAGGATCTTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRRAIFV*TGSFSD
Trigger: ATCTGAGAAAGATCCTGTCAATACAAAGATTGCCCT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGCTTGTTCTCCTGGTTaGGGGACATCCATTCGGCAC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQACSPG*GTSIRH
Trigger: GTGCCGAATGGATGTCCCCAAACCAGGAGAACAAGC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGTTACTCTTTCAAAATaGTGTAGCTTCAGGAGCACA +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRVTLSK*CSFRST
Trigger: TGTGCTCCTGAAGCTACACAATTTTGAAAGAGTAAC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGATGTTTAGCTCACCTCTaGCCTTCTCATTATTTCCTA +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRCLAHL*PSHYFL
Trigger: TAGGAAATAATGAGAAGGCAAGAGGTGAGCTAAACA...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTGAAATGGCCTTCATaGGAGCCATACTGCTTACGG +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLKWPS*EPYCLR
Trigger: CCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACATGTGGCTGCCATTGTaGAAATGGCCTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHMWLPL*KWPSLE
Trigger: CTCCAATGAAGGCCATTTCAACAATGGCAGCCACAT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAGCCTTTTCTTAGAGTaGGTGCTCCTTAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSLFLE*VLLRTL
Trigger: GAGAGTCCTAAGGAGCACCAACTCTAAGAAAAGGCT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp TCCTCCAGTTCAGCCGGCAGGCTTATTGTCCCATTGATAGGTTCATaGACTGCATCATCGGGTTTGGACTCTTCGATAGTAACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: SSSSAGRLIVPLIGS*TASSGLDSSIVTKF
Trigger: GAACTTTGTTACTATCGAAGAGTCCAAACCCGATGATGCAGTTCATGAACCTATCAATGGGACAATAAGCCTGCCGGCTGAACTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp CCAATACTGCTTAAGTCTCTAACTTCTTGTAGGAAACGTCAGAGTTaGGGTGATGATGATTCTCTGACAGCTATCCGGGTGACAGTTGCC +
Preference number: 5 (lower is better)
Translates to: PILLKSLTSCRKRQS*GDDDSLTAIRVTVA
Trigger: GGCAACTGTCACCCGGATAGCTGTCAGAGAATCATCATCACCGCAACTCTGACGTTTCCTACAAGAAGTTAGAGACTTAAGCAGTATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCAAAGAGTCTTTTGGTaGCAGGGGCGACCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCQRVFW*QGRPGH
Trigger: GTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAAGCAAAGAGTCTTTaGGTTGCAGGGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKAKSL*VAGATW
Trigger: CCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTTACATCGGTGACATaGATGGTAACCGTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHFTSVT*MVTVAR
Trigger: TCGAGCAACGGTTACCATCAATGTCACCGATGTAAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCACAGCCGCTTGGCTTaGGAGGGGAGGGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKHSRLA*EGRGPI
Trigger: AATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCACAGCCGCTTGGCTTaGGAGGGGAGGGGTCCCATT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIHSRLA*EGRGPI
Trigger: AATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCATCCATTCGGCACCTaGCTTGCTCCTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCHPFGT*LAPLSC
Trigger: GCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATCAGGACTGTTAGGCTaGAATGTTGTTGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSGLLG*NVVGGA
Trigger: GGCACCTCCAACAACATTCAAGCCTAACAGTCCTGA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTTGCTACTGCGGGATaGGCACCTGGCCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELATAG*APGQHK
Trigger: CTTGTGCTGGCCAGGTGCCAATCCCGCAGTAGCAAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCCCTCCCCCTTCTCCTaGCTACTGCGGGATTGGCAC +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAPSPFS*LLRDWH
Trigger: GTGCCAATCCCGCAGTAGCAAGGAGAAGGGGGAGGG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAGGCTGTACTACCAGCTaGATCCTTCCCTCCCCCTTC +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIGCTTS*ILPSPF
Trigger: GAAGGGGGAGGGAAGGATCAAGCTGGTAGTACAGCC...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCATTTGGGGGATCAGTaGTCACCTGTGTTCAACTGT +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNHLGDQ*SPVFNC
Trigger: ACAGTTGAACACAGGTGACAACTGATCCCCCAAATG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGCAGTTGCTATTGTCTaGCACAAAAACTGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRAVAIV*HKNCFL
Trigger: AAGAAAACAGTTTTTGTGCAAGACAATAGCAACTGC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAGAATTTTCACTTCACTaGTGTAATGTTGTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHREFSLH*CNVVQF
Trigger: GAACTGGACAACATTACACAAGTGAAGTGAAAATTC...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCTCAGCATGCAGCTGCTATCACACAGAGGCACAGATTGGTTGCATCCACCGAAAGTGGCCACAATTTTaGGATAAAATCATACACTGC +
Preference number: 5 (lower is better)
Translates to: SSACSCYHTEAQIGCIHRKWPQF*DKIIHC
Trigger: GCAGTGTATGATTTTATCCAAAAATTGTGGCCACTT...TCGGTGGATGCAACCAATCTGTGCCTCTGTGTGATAGCAGCTGCATGCTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTCTGCTTCAGTCCTCTaGTCCGGAGAGGCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCSASVL*SGEAWS
Trigger: TGACCAGGCCTCTCCGGACAAGAGGACTGAAGCAGA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGAGTTGGGATCAGAGTaGCCATCTGCTTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQELGSE*PSASVL
Trigger: GAGGACTGAAGCAGATGGCAACTCTGATCCCAACTC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAAGGCCCATCAGAGTaGGGATCAGAGTTGCCATCT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKGPSE*GSELPS
Trigger: AGATGGCAACTCTGATCCCAACTCTGATGGGCCTTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGGAGATTTGGGGTGTaGATATGGACCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQRRFGV*IWTQAR
Trigger: CCTGGCTTGGGTCCATATCAACACCCCAAATCTCCT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGTACCTGCCAGGCATaGACCAACTATGATAACAAA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGTCQA*TNYDNK
Trigger: TTTGTTATCATAGTTGGTCAATGCCTGGCAGGTACC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp GATCACCACCTCAAGTTCAAAGAAACACTCATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTTTTCTCTGTCTATTCTGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DHHLKFKETLILLSI*GASTEFFSVYSVGG
Trigger: ACCTCCAACAGAATAGACAGAGAAAAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAATGAGTGTTTCTTTGAACTTGAGGTGGTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp AAAGACTTAGGGTACCCCAGGTCACTTATGTTGACCACCAAACGATaGAATCCCACATCAGTAGGTGCTGGTTTTTCTTCCAGAGTAATG +
Preference number: 5 (lower is better)
Translates to: KDLGYPRSLMLTTKR*NPTSVGAGFSSRVM
Trigger: CATTACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGGGTACCCTAAGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CCA 90 bp AGCATTCTCTGGAATATGCACCTCCACTTGACCCTCTTTAAACACTaGCCTGTTGTCATTTACATCACTTACTGTGACCTGCAGTATGGC +
Preference number: 5 (lower is better)
Translates to: SILWNMHLHLTLFKH*PVVIYITYCDLQYG
Trigger: GCCATACTGCAGGTCACAGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAAAGAGGGTCAAGTGGAGGTGCATATTCCAGAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATCTGGTAGCACCAGTTaGGGGAGAAATCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSGSTS*GRNQKQ
Trigger: CTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAGA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACAAAGAGTCTTTTGGTaGCAGGGGCGACCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKQRVFW*QGRPGH
Trigger: GTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCAAAGAGTCTTTTGGTaGCAGGGGCGACCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNQRVFW*QGRPGH
Trigger: GTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTCAATTACAGGCTGGTaGAAAATTGGTGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHSITGW*KIGGLS
Trigger: TGACAACCCACCAATTTTCAACCAGCCTGTAATTGA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAGGGGAGGGGTCCCATaGTCCCTGGCAGTTACTGTA +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKRGGVP*SLAVTV
Trigger: TACAGTAACTGCCAGGGACAATGGGACCCCTCCCCT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGGGGAGGGGTCCCATaGTCCCTGGCAGTTACTGTA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRGGVP*SLAVTV
Trigger: TACAGTAACTGCCAGGGACAATGGGACCCCTCCCCT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAAACAATCACAGCCGCTaGGCTTTGGAGGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKNNHSR*ALEGRG
Trigger: ACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGTT...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAACAATCACAGCCGCTaGGCTTTGGAGGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNNNHSR*ALEGRG
Trigger: ACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGTAAACTTGGGGCTATaGTCATTCTCATCCAGAACA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHVNLGL*SFSSRT
Trigger: TGTTCTGGATGAGAATGACAATAGCCCCAAGTTTAC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCCACAGTACTATACTTaGGCAGATTCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHPQYYT*ADSQTQ
Trigger: TTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCTCATTTTGATAGGGTaGGCTACTATCCCCTATGTT +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLILIG*ATIPYV
Trigger: AACATAGGGGATAGTAGCCAACCCTATCAAAATGAG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCATCCATTCGGCACCTaGCTTGCTCCTCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNHPFGT*LAPLSC
Trigger: GCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAATCTTCCTATACTTaGCTCCTCCAGTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKSSYT*LLQFSR
Trigger: CCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAKGPFV*KPPWEL
Trigger: CAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGAGATGCCTGGTGGTaGCTTCTGAACCATTCAGGC +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMRDAWW*LLNHSG
Trigger: GCCTGAATGGTTCAGAAGCAACCACCAGGCATCTCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAAGGCCCATCAGAGTaGGGATCAGAGTTGCCATCT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKGPSE*GSELPS
Trigger: AGATGGCAACTCTGATCCCAACTCTGATGGGCCTTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp CAGTTCAGCCGGCAGGCTTATTGTCCCATTGATAGGTTCATGAACTaGATCATCGGGTTTGGACTCTTCGATAGTAACAAAGTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: QFSRQAYCPIDRFMN*IIGFGLFDSNKVQK
Trigger: CTTTTGAACTTTGTTACTATCGAAGAGTCCAAACCCGATGATGCAGTTCATGAACCTATCAATGGGACAATAAGCCTGCCGGCTGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp CTTTTCTTAGAGTTGGTGCTCCTTAGGACTCTCAGTAGCACCTCCTaGTTGCTTATAAGACTTCAGATTTGCCAGAGGAATGTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: LFLELVLLRTLSSTS*LLIRLQICQRNVCH
Trigger: ATGACAGACATTCCTCTGGCAAATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAGAGTCCTAAGGAGCACCAACTCTAAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CCA 90 bp GACATCCATGACGTTGATAGTTACTTTTGCAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGCTTTGACATCAAAAGTGTAGGAACT +
Preference number: 5 (lower is better)
Translates to: DIHDVDSYFCSRGTR*LSSISGFDIKSVGT
Trigger: AGTTCCTACACTTTTGATGTCAAAGCCACTGATGGAGGACAACCACCTCGTTCCTCTACTGCAAAAGTAACTATCAACGTCATGGATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTAATCGGTTATCTCTaGCGTGCTTCAGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLIGYL*RASETL
Trigger: CAGAGTCTCTGAAGCACGCAAGAGATAACCGATTAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACAAATGTTCAGATCCTTaGGTATGTTTCCTATGGGCA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHKCSDP*VCFLWA
Trigger: TGCCCATAGGAAACATACCAAAGGATCTGAACATTT...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACTGTGTCAGGATCTGTaGCTGATGGAATTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLCQDL*LMELES
Trigger: GCTTTCCAATTCCATCAGCAACAGATCCTGACACAG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATATAACCCACGTCGGTaGTTTTCAGAAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTYNPRR*FSETDS
Trigger: GCTGTCAGTTTCTGAAAACAACCGACGTGGGTTATA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGGGGAGGGGTCCCATaGTCCCTGGCAGTTACTGTA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRGGVP*SLAVTV
Trigger: TACAGTAACTGCCAGGGACAATGGGACCCCTCCCCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAACAATCACAGCCGCTaGGCTTTGGAGGGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAINNHSR*ALEGRG
Trigger: ACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACCCAGGTCACTTATGTaGACCACCAAACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQPRSLM*TTKRCN
Trigger: ATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKGPFV*KPPWEL
Trigger: CAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAACACAGAGGCACAGATaGGTTGCATCCACCGAATCC +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTITQRHR*VASTES
Trigger: GGATTCGGTGGATGCAACCAATCTGTGCCTCTGTGT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACGGAATATTGTCACTTTaGCTGTGTGAGTTACACTGT +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHGILSL*LCELHC
Trigger: ACAGTGTAACTCACACAGCAAAAGTGACAATATTCC...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACAAAACCAAGCACTCTaGAGTGCACATCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQQNQAL*SAHLCS
Trigger: GCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTTG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCAGGAGATTTGGGGTGTaGATATGGACCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCRRFGV*IWTQAR
Trigger: CCTGGCTTGGGTCCATATCAACACCCCAAATCTCCT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATGCCCATTCACAAGCTaGTCCTTCTTCACCCATTCT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQCPFTS*SFFTHS
Trigger: AGAATGGGTGAAGAAGGACAAGCTTGTGAATGGGCA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTGAAATGGCCTTCATaGGAGCCATACTGCTTACGG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQLKWPS*EPYCLR
Trigger: CCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATGTGGCTGCCATTGTaGAAATGGCCTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQMWLPL*KWPSLE
Trigger: CTCCAATGAAGGCCATTTCAACAATGGCAGCCACAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCACAAGTGCTTGAGATaGTTTGAACAATGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHHKCLR*FEQCVS
Trigger: TGACACACATTGTTCAAACAATCTCAAGCACTTGTG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp CAAAAACACTCTGCCCATTTAACAATTCATAATGCTGTACACCATTaGAGCCTGTGTCAGGATCTGTTGCTGATGGAATTGGAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: QKHSAHLTIHNAVHH*SLCQDLLLMELESG
Trigger: GCCGCTTTCCAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAGCATTATGAATTGTTAAATGGGCAGAGTGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp GGGTTGTCATTTTCATCCTCAAGCTTAACCCTTACCAGGGCAGTCTaGTTTAAACTGGGCTTCCCAGAATCAGAGGCAACAATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: GLSFSSSSLTLTRAV*FKLGFPESEATILK
Trigger: CTTTAAAATTGTTGCCTCTGATTCTGGGAAGCCCAGTTTAAATCAGACTGCCCTGGTAAGGGTTAAGCTTGAGGATGAAAATGACAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 90 bp AAAGAGTCACAGCTTTATTCTCTCCAGCATCTGCATCTGTCACTGTaGTTACCCCCACAGTACTATACTTTGGCAGATTCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: KESQLYSLQHLHLSL*LPPQYYTLADSQTQ
Trigger: TTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGGGGGTAATCACAGTGACAGATGCAGATGCTGGAGAGAATAAAGCTGTGACTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTCTGGAATGGAAATATaGATGACAGGAGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNSGMEI*MTGDGN
Trigger: GTTTCCATCTCCTGTCATCAATATTTCCATTCCAGA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACTTAAACACTGGCCTGTaGTCATTTACATCACTTACT +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHLNTGL*SFTSLT
Trigger: AGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAA...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAAGCAAAGAGTCTTTaGGTTGCAGGGGCGACCTGG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKAKSL*VAGATW
Trigger: CCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGAGGAACGAGGTGGTaGTCCTCCATCAGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRGTRW*SSISGF
Trigger: AAAGCCACTGATGGAGGACAACCACCTCGTTCCTCT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAACACCGGAATAAGCCTTTATaGTTTCCACTCACTATAGTA +
Preference number: 5 (lower is better)
Translates to: SPNYPTWRMFCYIMKAQHRNKPL*FPLTIV
Trigger: TACTATAGTGAGTGGAAACAATAAAGGCTTATTCCG...GTGTTGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCCCAGGTCACTTATGTaGACCACCAAACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMPRSLM*TTKRCN
Trigger: ATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACTCATTTTGATAGGGTaGGCTACTATCCCCTATGTT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLILIG*ATIPYV
Trigger: AACATAGGGGATAGTAGCCAACCCTATCAAAATGAG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGCTTGTTCTCCTGGTTaGGGGACATCCATTCGGCAC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKACSPG*GTSIRH
Trigger: GTGCCGAATGGATGTCCCCAAACCAGGAGAACAAGC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGCTTGTTCTCCTGGTTaGGGGACATCCATTCGGCAC +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIACSPG*GTSIRH
Trigger: GTGCCGAATGGATGTCCCCAAACCAGGAGAACAAGC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAACTGCATCATCGGGTTaGGACTCTTCGATAGTAACA +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQTASSG*DSSIVT
Trigger: TGTTACTATCGAAGAGTCCAAACCCGATGATGCAGT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACCCCAGGAGCAGAATTaGGCATATCAGGACAGGTTT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAPQEQN*AYQDRF
Trigger: AAACCTGTCCTGATATGCCAAATTCTGCTCCTGGGG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACGGTAAGGTGAAAGTCTaGAAGCAGTCAATTTGGAAA +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNGKVKV*KQSIWK
Trigger: TTTCCAAATTGACTGCTTCAAGACTTTCACCTTACC...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGGAAAGATAGCCAGTTaGAATGGGTGGCCTATCCTC +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQGKIAS*NGWPIL
Trigger: GAGGATAGGCCACCCATTCAAACTGGCTATCTTTCC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATACTTCCGATGTCATaGGCGCACTTGGAAGACCAT +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMILPMS*AHLEDH
Trigger: ATGGTCTTCCAAGTGCGCCAATGACATCGGAAGTAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGAGTTGGGATCAGAGTaGCCATCTGCTTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNELGSE*PSASVL
Trigger: GAGGACTGAAGCAGATGGCAACTCTGATCCCAACTC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGGAGATTTGGGGTGTaGATATGGACCCAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRRFGV*IWTQAR
Trigger: CCTGGCTTGGGTCCATATCAACACCCCAAATCTCCT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAGTAGCACCTCCTGCTaGCTTATAAGACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTSSTSC*LIRLQI
Trigger: AATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAGGTACCTGCCAGGCATaGACCAACTATGATAACAAA +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQGTCQA*TNYDNK
Trigger: TTTGTTATCATAGTTGGTCAATGCCTGGCAGGTACC...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACGAATTTGGATTTGTTaGCACGTGCAACTGAGATCT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTRIWIC*HVQLRS
Trigger: AGATCTCAGTTGCACGTGCAAACAAATCCAAATTCG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS TCA 90 bp TTCATAATGCTGTACACCATTGAAGCCTGTGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCTGTTGATCAAAGTGTTTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: FIMLYTIEACVRICC*WNWKAAVDQSVFWN
Trigger: ATTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAGCATTATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp GTCACTTATGTTGACCACCAAACGATGCAATCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGTAATGTTACCTGTTACTGGATCAAT +
Preference number: 5 (lower is better)
Translates to: VTYVDHQTMQSHISR*WFFFQSNVTCYWIN
Trigger: ATTGATCCAGTAACAGGTAACATTACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAACATAAGTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 90 bp AATAGACATACTGGCACGTTAATACTGGTTGACTGGGCACTTGTATaGAGTACTTATAGACCAGTAAAAGTGCTCGTTTACCTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: NRHTGTLILVDWALV*STYRPVKVLVYLSG
Trigger: ACCAGACAGGTAAACGAGCACTTTTACTGGTCTATAAGTACTGCATACAAGTGCCCAGTCAACCAGTATTAACGTGCCAGTATGTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACTAATCGGTTATCTCTaGCGTGCTTCAGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILIGYL*RASETL
Trigger: CAGAGTCTCTGAAGCACGCAAGAGATAACCGATTAG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTAATCGGTTATCTCTaGCGTGCTTCAGAGACTCTG +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLIGYL*RASETL
Trigger: CAGAGTCTCTGAAGCACGCAAGAGATAACCGATTAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAGCCTGAAGAAATCATaGGGGAGGATCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRESLKKS*GRITTS
Trigger: TGAGGTGGTGATCCTCCCCAATGATTTCTTCAGGCT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGCCTGAAGAAATCATaGGGGAGGATCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSLKKS*GRITTS
Trigger: TGAGGTGGTGATCCTCCCCAATGATTTCTTCAGGCT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATTGGAAAGCGGCTGTaGATCAAAGTGTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQIGKRL*IKVFSG
Trigger: TCCAGAAAACACTTTGATCAACAGCCGCTTTCCAAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACTGTGTCAGGATCTGTaGCTGATGGAATTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILCQDL*LMELES
Trigger: GCTTTCCAATTCCATCAGCAACAGATCCTGACACAG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCTGTGTCAGGATCTGTaGCTGATGGAATTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCLCQDL*LMELES
Trigger: GCTTTCCAATTCCATCAGCAACAGATCCTGACACAG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTCTCTATCCAAGTTTaGCTGAACAATCAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTFSIQV*LNNQLW
Trigger: CCACAACTGATTGTTCAGCAAAACTTGGATAGAGAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAAAATACACGGTGCCATaGATGGGACTTATAATGTAC +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTKYTVP*MGLIMY
Trigger: GTACATTATAAGTCCCATCAATGGCACCGTGTATTT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACAATAAAACAGATCACTTaGCCATTCACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTIKQIT*PFTSVS
Trigger: GGACACAGATGTGAATGGCAAAGTGATCTGTTTTAT...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTATAACCCACGTCGGTaGTTTTCAGAAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMYNPRR*FSETDS
Trigger: GCTGTCAGTTTCTGAAAACAACCGACGTGGGTTATA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAACCACAGTACTATACTTaGGCAGATTCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQPQYYT*ADSQTQ
Trigger: TTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGG...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGAGGAACGAGGTGGTaGTCCTCCATCAGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIRGTRW*SSISGF
Trigger: AAAGCCACTGATGGAGGACAACCACCTCGTTCCTCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATCAGGACTGTTAGGCTaGAATGTTGTTGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRESGLLG*NVVGGA
Trigger: GGCACCTCCAACAACATTCAAGCCTAACAGTCCTGA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTCAGGACTGTTAGGCTaGAATGTTGTTGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSGLLG*NVVGGA
Trigger: GGCACCTCCAACAACATTCAAGCCTAACAGTCCTGA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGATGGAAGCATTCACTaGGTACCCAGGCCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKDGSIH*VPRPLH
Trigger: ATGAAGAGGCCTGGGTACCAAGTGAATGCTTCCATC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGATGTCCCTGCCCTGTTaGGTATCCCAATGCTATAAA +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMMSLPC*VSQCYK
Trigger: TTTATAGCATTGGGATACCAAACAGGGCAGGGACAT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAGAACAGCACCATGTTaGCTGCCACTGTTTGTGATG +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQRTAPC*LPLFVM
Trigger: CATCACAAACAGTGGCAGCAAACATGGTGCTGTTCT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACTATCCTCACCACAAATaGATGCCTATCTTTGCATAT +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNYPHHK*MPIFAY
Trigger: ATATGCAAAGATAGGCATCAATTTGTGGTGAGGATA...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CCCAGATGGGTGGAGCTTCTGGGTAATCTATGGGGACGTAAATTCATTACAAACCTTTTTCACAAAACCTaGAATGTTAGTCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: PRWVELLGNLWGRKFITNLFHKT*NVSPWI
Trigger: TATCCAGGGACTAACATTCAAGGTTTTGTGAAAAAG...GTTTGTAATGAATTTACGTCCCCATAGATTACCCAGAAGCTCCACCCATCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGGAGCTGATGCCCATTaGCCTTGTCTACTACATCAC +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKGADAH*PCLLHH
Trigger: GTGATGTAGTAGACAAGGCAAATGGGCATCAGCTCC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGAGTTGGGATCAGAGTaGCCATCTGCTTCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKELGSE*PSASVL
Trigger: GAGGACTGAAGCAGATGGCAACTCTGATCCCAACTC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAAGGCCCATCAGAGTaGGGATCAGAGTTGCCATCT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKGPSE*GSELPS
Trigger: AGATGGCAACTCTGATCCCAACTCTGATGGGCCTTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCAAAACCAAGCACTCTaGAGTGCACATCTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCQNQAL*SAHLCS
Trigger: GCTACAGAGATGTGCACTCAAGAGTGCTTGGTTTTG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGTAGCACCTCCTGCTaGCTTATAAGACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQSSTSC*LIRLQI
Trigger: AATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACACAAATGCATATTCTATaGTTCATAGCAGCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTQMHIL*FIAAVQ
Trigger: CTGGACTGCTGCTATGAACAATAGAATATGCATTTG...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATGTTCGAATTTGGATTaGTTTGCACGTGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQCSNLD*FARATE
Trigger: CTCAGTTGCACGTGCAAACAAATCCAAATTCGAACA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCTGGTAGCACCAGTTaGGGGAGAAATCAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSGSTS*GRNQKQ
Trigger: CTGCTTCTGATTTCTCCCCAAACTGGTGCTACCAGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGGAATGATGCACAAATaGCAAGAGGAAGCGTGCATG +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREGMMHK*QEEACM
Trigger: CATGCACGCTTCCTCTTGCAATTTGTGCATCATTCC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGGAATGATGCACAAATaGCAAGAGGAAGCGTGCATG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNGMMHK*QEEACM
Trigger: CATGCACGCTTCCTCTTGCAATTTGTGCATCATTCC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAATGTTCAGATCCTTaGGTATGTTTCCTATGGGCA +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKCSDP*VCFLWA
Trigger: TGCCCATAGGAAACATACCAAAGGATCTGAACATTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGCCTGAAGAAATCATaGGGGAGGATCACCACCTCA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISLKKS*GRITTS
Trigger: TGAGGTGGTGATCCTCCCCAATGATTTCTTCAGGCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAATTCTCTATCCAAGTTTaGCTGAACAATCAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQFSIQV*LNNQLW
Trigger: CCACAACTGATTGTTCAGCAAAACTTGGATAGAGAA...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TATTTCCCCCAACTACCCTACCTGGAGAATGTTCTGTTACATCATGAAGGCACATTAAACACTGGCCTGTaGTCATTTACATCACTTACT +
Preference number: 5 (lower is better)
Translates to: YFPQLPYLENVLLHHEGTLNTGL*SFTSLT
Trigger: AGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAA...TGTGCCTTCATGATGTAACAGAACATTCTCCAGGTAGGGTAGTTGGGGGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAATTTACATCGGTGACATaGATGGTAACCGTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQFTSVT*MVTVAR
Trigger: TCGAGCAACGGTTACCATCAATGTCACCGATGTAAA...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTTTACATCGGTGACATaGATGGTAACCGTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCFTSVT*MVTVAR
Trigger: TCGAGCAACGGTTACCATCAATGTCACCGATGTAAA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAAATACACGGTGCCATaGATGGGACTTATAATGTAC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQKYTVP*MGLIMY
Trigger: GTACATTATAAGTCCCATCAATGGCACCGTGTATTT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAAGGGCAATCTTTGTATaGACAGGATCTTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQRAIFV*TGSFSD
Trigger: ATCTGAGAAAGATCCTGTCAATACAAAGATTGCCCT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGATCAACACAGACTCTGCCATTTCAACAAAGTTGTAGACACACATTTGCCCAAATAAAACAGATCACTTaGCCATTCACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GSTQTLPFQQSCRHTFAQIKQIT*PFTSVS
Trigger: GGACACAGATGTGAATGGCAAAGTGATCTGTTTTAT...TTGGGCAAATGTGTGTCTACAACTTTGTTGAAATGGCAGAGTCTGTGTTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTATAACCCACGTCGGTaGTTTTCAGAAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCYNPRR*FSETDS
Trigger: GCTGTCAGTTTCTGAAAACAACCGACGTGGGTTATA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGCCACAGTACTATACTTaGGCAGATTCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMPQYYT*ADSQTQ
Trigger: TTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGG...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCCCAGGTCACTTATGTaGACCACCAAACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNPRSLM*TTKRCN
Trigger: ATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAACTGCATCATCGGGTTaGGACTCTTCGATAGTAACA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQTASSG*DSSIVT
Trigger: TGTTACTATCGAAGAGTCCAAACCCGATGATGCAGT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCACTGCATCATCGGGTTaGGACTCTTCGATAGTAACA +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCTASSG*DSSIVT
Trigger: TGTTACTATCGAAGAGTCCAAACCCGATGATGCAGT...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAATCTTCCTATACTTaGCTCCTCCAGTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKSSYT*LLQFSR
Trigger: CCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCAGGACTGTTAGGCTaGAATGTTGTTGGAGGTGCC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSGLLG*NVVGGA
Trigger: GGCACCTCCAACAACATTCAAGCCTAACAGTCCTGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAATACAGACATCTGACTaGGCCCTGAAACCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIIQTSD*ALKPCK
Trigger: TTTACAGGGTTTCAGGGCCAAGTCAGATGTCTGTAT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAGAGGCACAGATTGGTaGCATCCACCGAATCCAAAA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRERGTDW*HPPNPK
Trigger: TTTTGGATTCGGTGGATGCAACCAATCTGTGCCTCT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTGAATTCCCAGTACTaGAGTCCTGCAACTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELNSQY*SPATKP
Trigger: TGGCTTAGTTGCAGGACTCAAGTACTGGGAATTCAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCCTACCTCTCAGTATaGGCTACAACATCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASYLSV*ATTSAL
Trigger: AAGAGCAGATGTTGTAGCCAATACTGAGAGGTAGGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAGAGGATCTTATTTCTaGCCCTGCGAAATGAACAGG +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIRGSYF*PCEMNR
Trigger: CCTGTTCATTTCGCAGGGCAAGAAATAAGATCCTCT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTGCCCATTCACAAGCTaGTCCTTCTTCACCCATTCT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNCPFTS*SFFTHS
Trigger: AGAATGGGTGAAGAAGGACAAGCTTGTGAATGGGCA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACGTCATGTGGCTGCCATaGTTGAAATGGCCTTCATTG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNVMWLP*LKWPSL
Trigger: CAATGAAGGCCATTTCAACAATGGCAGCCACATGAC...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCGGTACCTGCCAGGCATaGACCAACTATGATAACAAA +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCGTCQA*TNYDNK
Trigger: TTTGTTATCATAGTTGGTCAATGCCTGGCAGGTACC...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS CCA 90 bp TTAGACCAAAACAATAGACATACTGGCACGTTAATACTGGTTGACTaGGCACTTGTATGCAGTACTTATAGACCAGTAAAAGTGCTCGTT +
Preference number: 5 (lower is better)
Translates to: LDQNNRHTGTLILVD*ALVCSTYRPVKVLV
Trigger: AACGAGCACTTTTACTGGTCTATAAGTACTGCATACAAGTGCCCAGTCAACCAGTATTAACGTGCCAGTATGTCTATTGTTTTGGTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATTGGAAAGCGGCTGTaGATCAAAGTGTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQIGKRL*IKVFSG
Trigger: TCCAGAAAACACTTTGATCAACAGCCGCTTTCCAAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTAAACTTGGGGCTATaGTCATTCTCATCCAGAACA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVNLGL*SFSSRT
Trigger: TGTTCTGGATGAGAATGACAATAGCCCCAAGTTTAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCCACAGTACTATACTTaGGCAGATTCTCAGACACAA +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCPQYYT*ADSQTQ
Trigger: TTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCCCAGGTCACTTATGTaGACCACCAAACGATGCAAT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIPRSLM*TTKRCN
Trigger: ATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAAATCTTCCTATACTTaGCTCCTCCAGTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIKSSYT*LLQFSR
Trigger: CCGGCTGAACTGGAGGAGCAAAGTATAGGAAGATTT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGTTTTTGAAAGAGTATTaGGCCACTGCGGACACTAAA +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMFLKEY*ATADTK
Trigger: TTTAGTGTCCGCAGTGGCCAAATACTCTTTCAAAAA...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGTGGCATACCAGTATTaGGATTTACTGAGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAVAYQY*DLLSCH
Trigger: ATGGCAACTCAGTAAATCCAAATACTGGTATGCCAC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAAGGCATTTTAGCTGGTTaGATTACACCATGGATGCCA +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKGILAG*ITPWMP
Trigger: TGGCATCCATGGTGTAATCAAACCAGCTAAAATGCC...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAACCAATCCAAAACAATaGTATTGCACTGAGAGGGTG +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTITNPKQ*YCTERV
Trigger: CACCCTCTCAGTGCAATACAATTGTTTTGGATTGGT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATGTCATTGGCGCACTaGGAAGACCATAACATAAGA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQMSLAH*EDHNIR
Trigger: TCTTATGTTATGGTCTTCCAAGTGCGCCAATGACAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAATGTAAAACAGGGGTTTaGCATGGAGTAAGCATGGCA +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKCKTGV*HGVSMA
Trigger: TGCCATGCTTACTCCATGCAAAACCCCTGTTTTACA...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTGCCCATTCACAAGCTaGTCCTTCTTCACCCATTCT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAICPFTS*SFFTHS
Trigger: AGAATGGGTGAAGAAGGACAAGCTTGTGAATGGGCA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTACTGCTTACGGTCATaGAACTGGTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIYCLRS*NWFLLL
Trigger: CAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTACTGCTTACGGTCATaGAACTGGTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKYCLRS*NWFLLL
Trigger: CAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTTGAAATGGCCTTCATaGGAGCCATACTGCTTACGG +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILKWPS*EPYCLR
Trigger: CCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGATGTGGCTGCCATTGTaGAAATGGCCTTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKMWLPL*KWPSLE
Trigger: CTCCAATGAAGGCCATTTCAACAATGGCAGCCACAT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTGTCATGTGGCTGCCATaGTTGAAATGGCCTTCATTG +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIVMWLP*LKWPSL
Trigger: CAATGAAGGCCATTTCAACAATGGCAGCCACATGAC...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGCCTTTTCTTAGAGTaGGTGCTCCTTAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISLFLE*VLLRTL
Trigger: GAGAGTCCTAAGGAGCACCAACTCTAAGAAAAGGCT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAGCCTTTTCTTAGAGTaGGTGCTCCTTAGGACTCTC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSLFLE*VLLRTL
Trigger: GAGAGTCCTAAGGAGCACCAACTCTAAGAAAAGGCT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCTGTTCGAATTTGGATTaGTTTGCACGTGCAACTGAG +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCCSNLD*FARATE
Trigger: CTCAGTTGCACGTGCAAACAAATCCAAATTCGAACA...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS CCA 90 bp GCGCTGCGAATTTGTGGCTCATATTACAATTCTATTTTACAGCATTaGTCTGGAGTTTATTCAGAGAGAATATCTCAAGTAAGGGAGTGT +
Preference number: 5 (lower is better)
Translates to: ALRICGSYYNSILQH*SGVYSERISQVREC
Trigger: ACACTCCCTTACTTGAGATATTCTCTCTGAATAAACTCCAGACCAATGCTGTAAAATAGAATTGTAATATGAGCCACAAATTCGCAGCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATAAAATGTTCAGATCCTTaGGTATGTTTCCTATGGGCA +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIKCSDP*VCFLWA
Trigger: TGCCCATAGGAAACATACCAAAGGATCTGAACATTT...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACATTGGAAAGCGGCTGTaGATCAAAGTGTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNIGKRL*IKVFSG
Trigger: TCCAGAAAACACTTTGATCAACAGCCGCTTTCCAAT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTTTACATCGGTGACATaGATGGTAACCGTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKFTSVT*MVTVAR
Trigger: TCGAGCAACGGTTACCATCAATGTCACCGATGTAAA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAAAATACACGGTGCCATaGATGGGACTTATAATGTAC +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQKYTVP*MGLIMY
Trigger: GTACATTATAAGTCCCATCAATGGCACCGTGTATTT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAATAAAACAGATCACTTaGCCATTCACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAIKQIT*PFTSVS
Trigger: GGACACAGATGTGAATGGCAAAGTGATCTGTTTTAT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTCAATTACAGGCTGGTaGAAAATTGGTGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSITGW*KIGGLS
Trigger: TGACAACCCACCAATTTTCAACCAGCCTGTAATTGA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTATAACCCACGTCGGTaGTTTTCAGAAACTGACAGC +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIYNPRR*FSETDS
Trigger: GCTGTCAGTTTCTGAAAACAACCGACGTGGGTTATA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTCATTTTGATAGGGTaGGCTACTATCCCCTATGTT +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELILIG*ATIPYV
Trigger: AACATAGGGGATAGTAGCCAACCCTATCAAAATGAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTACTGCATCATCGGGTTaGGACTCTTCGATAGTAACA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAITASSG*DSSIVT
Trigger: TGTTACTATCGAAGAGTCCAAACCCGATGATGCAGT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAAGCCTCTTCCTGACTaGCATTTCCAAATTTTCACT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAKPLPD*HFQIFT
Trigger: AGTGAAAATTTGGAAATGCAAGTCAGGAAGAGGCTT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAATTCTGCCACTATTCTaGTCTATCAGAGACAAACTG +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAILPLF*SIRDKL
Trigger: CAGTTTGTCTCTGATAGACAAGAATAGTGGCAGAAT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACAAATGCAGAGATGGTaGGATAGAGAGACAAACTAT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAQMQRW*DRETNY
Trigger: ATAGTTTGTCTCTCTATCCAACCATCTCTGCATTTG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGATTTAGGCACCAGCTaGATGGTTATCACAGAAGTC +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLADLGTS*MVITEV
Trigger: GACTTCTGTGATAACCATCAAGCTGGTGCCTAAATC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAGTCCATCTTCTAACCTaGCCAGATACTGCTAATATT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAVHLLT*PDTANI
Trigger: AATATTAGCAGTATCTGGCAAGGTTAGAAGATGGAC...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp GGAAAGCAAGGACTAGTGCATTTAAATGATGTGCCCAGTATCACAGTCTTTATGAGGACTGAGATACACTaGTTATCATTAGAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: GKQGLVHLNDVPSITVFMRTEIH*LSLEFD
Trigger: GTCAAACTCTAATGATAACAAGTGTATCTCAGTCCT...CATAAAGACTGTGATACTGGGCACATCATTTAAATGCACTAGTCCTTGCTTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGGTTTAAGGGGAATCTaGAGAATTCAACACGCGGTT +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAGLRGI*RIQHAV
Trigger: AACCGCGTGTTGAATTCTCAAGATTCCCCTTAAACC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCAAGACATAGCAGTCTTTaGACCATTCTCTCACAATGT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQARHSSL*TILSQC
Trigger: ACATTGTGAGAGAATGGTCAAAAGACTGCTATGTCT...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGTGAGGGTGTTCATTTaGTCCATATTTGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAVRVFI*SIFASG
Trigger: CCCTGATGCAAATATGGACAAAATGAACACCCTCAC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACCAAGTTGCCTCTTATaGGTCAGAATGAAAAGCATA +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIPSCLL*VRMKSI
Trigger: TATGCTTTTCATTCTGACCAATAAGAGGCAACTTGG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATACACATGGCGATTTATTaGGGGTATGTAAAAATGTGG +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTIHMAIY*GYVKMW
Trigger: CCACATTTTTACATACCCCAAATAAATCGCCATGTG...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGTAGCACCTCCTGCTaGCTTATAAGACTTCAGATT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSSTSC*LIRLQI
Trigger: AATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGCCTTAACAAAAACCTCCTAAGAATGTTCGAATTTGGATTTGTTTGCACGTGCCAAATGCATATTCTATaGTTCATAGCAGCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: CLNKNLLRMFEFGFVCTCQMHIL*FIAAVQ
Trigger: CTGGACTGCTGCTATGAACAATAGAATATGCATTTG...GCACGTGCAAACAAATCCAAATTCGAACATTCTTAGGAGGTTTTTGTTAAGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS TCA 90 bp GAAGAGGTCTCTAACAAATATTGGTTGTCATATACCGCCTTCAAATaGAATGGGACCTCTCTTTCAATAAAACAGATCACTTTGCCATTC +
Preference number: 5 (lower is better)
Translates to: EEVSNKYWLSYTAFK*NGTSLSIKQITLPF
Trigger: GAATGGCAAAGTGATCTGTTTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATATGACAACCAATATTTGTTAGAGACCTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGTGTAAATAAGTTCTaGAGCTATTGCGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNSVNKF*SYCGIQ
Trigger: CTGGATTCCGCAATAGCTCAAGAACTTATTTACACT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTATTGGAAAGCGGCTGTaGATCAAAGTGTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIIGKRL*IKVFSG
Trigger: TCCAGAAAACACTTTGATCAACAGCCGCTTTCCAAT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTTCTCTATCCAAGTTTaGCTGAACAATCAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNFSIQV*LNNQLW
Trigger: CCACAACTGATTGTTCAGCAAAACTTGGATAGAGAA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTAAACACTGGCCTGTaGTCATTTACATCACTTACT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQALNTGL*SFTSLT
Trigger: AGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAAATACACGGTGCCATaGATGGGACTTATAATGTAC +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNKYTVP*MGLIMY
Trigger: GTACATTATAAGTCCCATCAATGGCACCGTGTATTT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACAGGGCAATCTTTGTATaGACAGGATCTTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRAIFV*TGSFSD
Trigger: ATCTGAGAAAGATCCTGTCAATACAAAGATTGCCCT...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCAATTACAGGCTGGTaGAAAATTGGTGGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASITGW*KIGGLS
Trigger: TGACAACCCACCAATTTTCAACCAGCCTGTAATTGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGTAAACTTGGGGCTATaGTCATTCTCATCCAGAACA +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKVNLGL*SFSSRT
Trigger: TGTTCTGGATGAGAATGACAATAGCCCCAAGTTTAC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAACGGAATAAGCCTTTATaGTTTCCACTCACTATAGTA +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQRNKPL*FPLTIV
Trigger: TACTATAGTGAGTGGAAACAATAAAGGCTTATTCCG...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCTCATTTTGATAGGGTaGGCTACTATCCCCTATGTT +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAILILIG*ATIPYV
Trigger: AACATAGGGGATAGTAGCCAACCCTATCAAAATGAG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATCAAGAAAAGATCTCTaGCATACTTTGCTGAAATGC +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQASRKDL*HTLLKC
Trigger: GCATTTCAGCAAAGTATGCAAGAGATCTTTTCTTGA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATTGGAATGGATAATGTaGTCGTTTTCATCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTILEWIM*SFSSSS
Trigger: TGAAGAGGATGAAAACGACAACATTATCCATTCCAA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCATTTAAAGCCTTGTaGGAATGGATAATGTTGTCG +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISFKAL*EWIMLS
Trigger: CGACAACATTATCCATTCCAACAAGGCTTTAAATGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTACCACCTAGGAACTaGTTAGCAATGTATATTTTC +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVPPRN*LAMYIF
Trigger: GAAAATATACATTGCTAACAAGTTCCTAGGTGGTAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAAAAACAATTTGCATTaGGGGGATCAGTTGTCACCT +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREKNNLH*GDQLSP
Trigger: AGGTGACAACTGATCCCCCAAATGCAAATTGTTTTT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATATTCCTCAAAGACCTaGACTGTGCTTCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREYSSKT*TVLLSL
Trigger: CAAAGATAGAAGCACAGTCAAGGTCTTTGAGGAATA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAGTCTCCATTTGTCATTaGCACCTTCTACAAAAAGTT +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQVSICH*HLLQKV
Trigger: AACTTTTTGTAGAAGGTGCAAATGACAAATGGAGAC...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTTGGATTTACTGAGTaGCCATTTGAGACCAAAAGA +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAFGFTE*PFETKR
Trigger: TCTTTTGGTCTCAAATGGCAACTCAGTAAATCCAAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCTGAGTGTCTGGCTATaGCGAGCCAGATATATATAT +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLALSVWL*RARYIY
Trigger: ATATATATATCTGGCTCGCAATAGCCAGACACTCAG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAGAGCAAGCGAATGAACTTAAATGCTAGTTGCTCCAGAGCAACTATCATTAAACATATGACAAGGTCTTaGGCAGCAGAAAATTTCACA +
Preference number: 5 (lower is better)
Translates to: KSKRMNLNASCSRATIIKHMTRS*AAENFT
Trigger: TGTGAAATTTTCTGCTGCCAAAGACCTTGTCATATG...TTTAATGATAGTTGCTCTGGAGCAACTAGCATTTAAGTTCATTCGCTTGCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAATCTTATTACCCCATaGAAAGATCAAGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRENLITP*KDQVSS
Trigger: GCTGGAGACTTGATCTTTCAATGGGGTAATAAGATT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAATTGCAAATCATTCATaGTCAGGAGAGACTGAACCA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREIANHS*SGETEP
Trigger: TGGTTCAGTCTCTCCTGACAATGAATGATTTGCAAT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGGTCTCAAGCCCATCATTTAAAACGTGATATGTGCTTATGGCACTCTAATCAAATTACAAGAGCAGAATaGACTGAATTCCCAGTACTT +
Preference number: 5 (lower is better)
Translates to: WSQAHHLKRDMCLWHSNQITRAE*TEFPVL
Trigger: AAGTACTGGGAATTCAGTCAATTCTGCTCTTGTAAT...TTGATTAGAGTGCCATAAGCACATATCACGTTTTAAATGATGGGCTTGAGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTCCAGAACATACATCTTaGATACGAGTAGTTGGAGGA +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAPEHTS*IRVVGG
Trigger: TCCTCCAACTACTCGTATCAAAGATGTATGTTCTGG...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCACTTATGCAAAAATCCTaGCGTGTTCATTTGACACAA +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQALMQKS*RVHLTQ
Trigger: TTGTGTCAAATGAACACGCAAGGATTTTTGCATAAG...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp TGTGACCTGAAGCAAATCATTCAACTTCTCCTCAGCTGTAAAATACGGACAATATCTACTTTCAAGGCATaGCAAACTGTGTTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: CDLKQIIQLLLSCKIRTISTFKA*QTVFLE
Trigger: TTCTAGAAACACAGTTTGCAATGCCTTGAAAGTAGA...TATTGTCCGTATTTTACAGCTGAGGAGAAGTTGAATGATTTGCTTCAGGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AGTGCCATCTACAGGCTATTATCGATATTCAAATTTTGTGGCAACAGACAAGCATTCACTTGTGTAATGTaGTCCAGTTCCATTAATCCT +
Preference number: 5 (lower is better)
Translates to: SAIYRLLSIFKFCGNRQAFTCVM*SSSINP
Trigger: AGGATTAATGGAACTGGACAACATTACACAAGTGAA...TGCTTGTCTGTTGCCACAAAATTTGAATATCGATAATAGCCTGTAGATGGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTATAAGACTTCAGATTaGCCAGAGGAATGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNYKTSD*PEECLS
Trigger: TGACAGACATTCCTCTGGCAAATCTGAAGTCTTATA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGCGAATTTGGATTTGTTaGCACGTGCAACTGAGATCT +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKRIWIC*HVQLRS
Trigger: AGATCTCAGTTGCACGTGCAAACAAATCCAAATTCG...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTAACAAATTCACGGATTaGTCGTTAGTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLANKFTD*SLVILS
Trigger: GGAGAGAATGACTAACGACAAATCCGTGAATTTGTT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAACAAATTCACGGATTaGTCGTTAGTCATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKNKFTD*SLVILS
Trigger: GGAGAGAATGACTAACGACAAATCCGTGAATTTGTT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGCAGTTAGGAATGATTaGTTCCAACACATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKAVRND*FQHIES
Trigger: GCTTTCTATGTGTTGGAACAAATCATTCCTAACTGC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTAGTGTAAATAAGTTCTaGAGCTATTGCGGAATCCAG +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISVNKF*SYCGIQ
Trigger: CTGGATTCCGCAATAGCTCAAGAACTTATTTACACT...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAAATGTTCAGATCCTTaGGTATGTTTCCTATGGGCA +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKKCSDP*VCFLWA
Trigger: TGCCCATAGGAAACATACCAAAGGATCTGAACATTT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCTGGAATGGAAATATaGATGACAGGAGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAISGMEI*MTGDGN
Trigger: GTTTCCATCTCCTGTCATCAATATTTCCATTCCAGA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTCTGGAATGGAAATATaGATGACAGGAGATGGAAAC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKSGMEI*MTGDGN
Trigger: GTTTCCATCTCCTGTCATCAATATTTCCATTCCAGA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACTTAAACACTGGCCTGTaGTCATTTACATCACTTACT +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNLNTGL*SFTSLT
Trigger: AGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAA...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGAGGGCAATCTTTGTATaGACAGGATCTTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKRAIFV*TGSFSD
Trigger: ATCTGAGAAAGATCCTGTCAATACAAAGATTGCCCT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGATAAAACAGATCACTTaGCCATTCACATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKIKQIT*PFTSVS
Trigger: GGACACAGATGTGAATGGCAAAGTGATCTGTTTTAT...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp AAACACAAGTGCTTGAGATTGTTTGAACAATGTGTGTCAAGACAGACTACTAACCGGAATAAGCCTTTATaGTTTCCACTCACTATAGTA +
Preference number: 5 (lower is better)
Translates to: KHKCLRLFEQCVSRQTTNRNKPL*FPLTIV
Trigger: TACTATAGTGAGTGGAAACAATAAAGGCTTATTCCG...GTTAGTAGTCTGTCTTGACACACATTGTTCAAACAATCTCAAGCACTTGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATCGATATTCAAATTTaGTGGCAACAGACAAGCACC +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAIDIQI*WQQTST
Trigger: GGTGCTTGTCTGTTGCCACAAAATTTGAATATCGAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGACAGCCCAATAGGTTaGTATCAAACAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLADSPIG*YQTKAK
Trigger: TTTTGCCTTTGTTTGATACAAACCTATTGGGCTGTC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTGCATGGCAGAAAATCTaGCCATTTAAGACCAAGAAT +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAAWQKI*PFKTKN
Trigger: ATTCTTGGTCTTAAATGGCAAGATTTTCTGCCATGC...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAAGGTGCATTGGAAACTaGAGAATGTGTAACTATTCT +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRERCIGN*RMCNYS
Trigger: AGAATAGTTACACATTCTCAAGTTTCCAATGCACCT...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAAGATTTTATGGTGAAGTaGGTCATTACAGACAACAGA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREDFMVK*VITDNR
Trigger: TCTGTTGTCTGTAATGACCAACTTCACCATAAAATC...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTATCATTAGCTGGTGTTaGACATCTACTTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLAIISWC*TSTFKA
Trigger: TGCCTTGAAAGTAGATGTCAAACACCAGCTAATGAT...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAACTTCCCAATTTCTCATaGTCTGGTGAACAACATAAA +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSRELPNFS*SGEQHK
Trigger: TTTATGTTGTTCACCAGACAATGAGAAATTGGGAAG...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp CGTGATATGTGCTTATGGCACTCTAATCAATCAAACTGTAAAAGATCAAGGGAATACTGGCTTACTCAGTaGAATAACTCCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: RDMCLWHSNQSNCKRSREYWLTQ*NNSSLF
Trigger: AAATAAGGAGGAGTTATTCAACTGAGTAAGCCAGTA...TTCCCTTGATCTTTTACAGTTTGATTGATTAGAGTGCCATAAGCACATATCACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGGGAATATTGTCACTTTaGCTGTGTGAGTTACACTGT +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKGILSL*LCELHC
Trigger: ACAGTGTAACTCACACAGCAAAAGTGACAATATTCC...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTATAAGACTTCAGATTaGCCAGAGGAATGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIYKTSD*PEECLS
Trigger: TGACAGACATTCCTCTGGCAAATCTGAAGTCTTATA...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTTCAACAAAGTATAAGACTTCAGATTaGCCAGAGGAATGTCTGTCA +
Preference number: 5 (lower is better)
Translates to: TTTLLYMRINTDSAISTKYKTSD*PEECLS
Trigger: TGACAGACATTCCTCTGGCAAATCTGAAGTCTTATA...CTTTGTTGAAATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp ACTTGTGTTACAACAACATTATTGTATATGAGGATCAACACAGACTCTGCCATTCACAAGTGCTTGAGATaGTTTGAACAATGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: TCVTTTLLYMRINTDSAIHKCLR*FEQCVS
Trigger: TGACACACATTGTTCAAACAATCTCAAGCACTTGTG...AATGGCAGAGTCTGTGTTGATCCTCATATACAATAATGTTGTTGTAACACAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS-3UTR CAA 90 bp CATACCGTTTACAATAGAAGCTTAAAGATCCAAATAGTCTGCAATCCATTAGCTTCATTTTGTCCATATTaGCATCAGGGTTGTATGTGT +
Preference number: 5 (lower is better)
Translates to: HTVYNRSLKIQIVCNPLASFCPY*HQGCMC
Trigger: ACACATACAACCCTGATGCAAATATGGACAAAATGA...AGCTAATGGATTGCAGACTATTTGGATCTTTAAGCTTCTATTGTAAACGGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS CAA 72 bp CGCTGCGACTGTCTGGTGTGTAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTGCACTCTGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: RCDCLVCKGPFV*KPPWELHSEAL
Trigger: CAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTTACACACCAGACAGTCGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544246.5
CDS TCA 72 bp GGCACCTTGCTTGCTCCTCTGAGCTGCTTTGAACCTTaGTGCATGGCGACAGCGCACCAGAACGGTGACGAA +
Preference number: 6 (lower is better)
Translates to: GTLLAPLSCFEP*CMATAHQNGDE
Trigger: TTCGTCACCGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TCCATTCGGCACCTTGCTTGCTCCTCTGAGCTGCTTTaGACCTTGATGCATGGCGACAGCGCACCAGAACGG +
Preference number: 6 (lower is better)
Translates to: SIRHLACSSELL*TLMHGDSAPER
Trigger: CCGTTCTGGTGCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TTTGGGGACATCCATTCGGCACCTTGCTTGCTCCTCTaGGCTGCTTTGAACCTTGATGCATGGCGACAGCGC +
Preference number: 6 (lower is better)
Translates to: FGDIHSAPCLLL*AALNLDAWRQR
Trigger: GCGCTGTCGCCATGCATCAAGGTTCAAAGCAGCTCAGAGGAGCAAGCAAGGTGCCGAATGGATGTCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CCA 72 bp TCATCCAGAACAGTAACAATCACAGCCGCTTGGCTTTaGAGGGGAGGGGTCCCATTGTCCCTGGCAGTTACT +
Preference number: 6 (lower is better)
Translates to: SSRTVTITAAWL*RGGVPLSLAVT
Trigger: AGTAACTGCCAGGGACAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATTGTTACTGTTCTGGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp TCGTTTACCTGTCTGGTGTGTAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTGCACTCTGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: SFTCLVCKGPFV*KPPWELHSEAL
Trigger: CAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTTACACACCAGACAGGTAAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS CAA 72 bp GAGTTACACTGTCTGGTGTGTAAGGGGCCCTTTGTCTaGAAGCCTCCTTGGGAACTGCACTCTGAGGCACTG +
Preference number: 6 (lower is better)
Translates to: ELHCLVCKGPFV*KPPWELHSEAL
Trigger: CAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTTCAAGACAAAGGGCCCCTTACACACCAGACAGTGTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377865.7
ENST00000456367.5
CDS CCA 72 bp CTTGGCCAGGTCAGGACTGTTAGGCTTGAATGTTGTTaGAGGTGCCGGGCCCCAGTCAAATCTTCCTATACT +
Preference number: 6 (lower is better)
Translates to: LGQVRTVRLECC*RCRAPVKSSYT
Trigger: AGTATAGGAAGATTTGACTGGGGCCCGGCACCTCCAACAACATTCAAGCCTAACAGTCCTGACCTGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp GAGCCATACTGCTTACGGTCATTGAACTGGTTCCTGTaGCTGTCTTCTTTCCAGGCTCTGGTCAGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: EPYCLRSLNWFL*LSSFQALVRVC
Trigger: GCACACCCTGACCAGAGCCTGGAAAGAAGACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTATGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS GCA 72 bp GTTGCCCGAAAAATTCCTAATCGGTTATCTCTTGCGTaGTTCAGAGACTCTGAGGCGCTCCTTTCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: VARKIPNRLSLA*FRDSEALLSVS
Trigger: CGAGACGGAAAGGAGCGCCTCAGAGTCTCTGAAGCACGCAAGAGATAACCGATTAGGAATTTTTCGGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS GCA 72 bp GTTATCATTTACATCGGTGACATTGATGGTAACCGTTaGTCGAGCAGGAGTGGAGCTGCCGTCACTAGCCAG +
Preference number: 6 (lower is better)
Translates to: VIIYIGDIDGNR*SSRSGAAVTSQ
Trigger: CTGGCTAGTGACGGCAGCTCCACTCCTGCTCGAGCAACGGTTACCATCAATGTCACCGATGTAAATGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp CAGGTCAGGACTGTTAGGCTTGAATGTTGTTGGAGGTaGCGGGCCCCAGTCAAATCTTCCTATACTTTGCTC +
Preference number: 6 (lower is better)
Translates to: QVRTVRLECCWR*RAPVKSSYTLL
Trigger: GAGCAAAGTATAGGAAGATTTGACTGGGGCCCGGCACCTCCAACAACATTCAAGCCTAACAGTCCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp TCACAAGCTTGTCCTTCTTCACCCATTCTTTCTGGGGTGCAAAGGTaGAGAGAGGAGATTTGGGGTGTTGATATGGACCCAAGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SQACPSSPILSGVQR*REEIWGVDMDPSQE
Trigger: CTCCTGGCTTGGGTCCATATCAACACCCCAAATCTCCTCTCTCAACCTTTGCACCCCAGAAAGAATGGGTGAAGAAGGACAAGCTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS TCA 72 bp AAGCCTCCTTGGGAACTGCACTCTGAGGCACTGAAGTaGTCTGAACTAGTGGAAGAGCGTTTAGAAAGGGTG +
Preference number: 6 (lower is better)
Translates to: KPPWELHSEALK*SELVEERLERV
Trigger: CACCCTTTCTAAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGAGTGCAGTTCCCAAGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp AGCACAAGCGTGTGCAAAGACTTAGGGTACCCCAGGTCACTTATGTaGACCACCAAACGATGCAATCCCACATCAGTAGGTGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: STSVCKDLGYPRSLM*TTKRCNPTSVGAGF
Trigger: AAAACCAGCACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGGGTACCCTAAGTCTTTGCACACGCTTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp ACAAGGCTGGCGCTGGTCCCTGTGGCAGCATTGATGTaGGAAATGTTCAGATCCTTTGGTATGTTTCCTATG +
Preference number: 6 (lower is better)
Translates to: TRLALVPVAALM*EMFRSFGMFPM
Trigger: CATAGGAAACATACCAAAGGATCTGAACATTTCTCACATCAATGCTGCCACAGGGACCAGCGCCAGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TGTAGACAAGGCTGGCGCTGGTCCCTGTGGCAGCATTaGTGTGAGAAATGTTCAGATCCTTTGGTATGTTTC +
Preference number: 6 (lower is better)
Translates to: CRQGWRWSLWQH*CEKCSDPLVCF
Trigger: GAAACATACCAAAGGATCTGAACATTTCTCACATCAATGCTGCCACAGGGACCAGCGCCAGCCTTGTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp AATGGCCTTCATTGGAGCCATACTGCTTACGGTCATTaGACTGGTTCCTGTTGCTGTCTTCTTTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: NGLHWSHTAYGH*TGSCCCLLSRL
Trigger: GAGCCTGGAAAGAAGACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGAAGGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CCA 72 bp GAGTTCCTGAATCACGTGGTGCTTTTTCACGGAAACTaGAGTGTCTGGTTTGAGATGAAAAGCAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: EFLNHVVLFHGN*SVWFEMKSRLW
Trigger: CCACAGCCTGCTTTTCATCTCAAACCAGACACTCCAGTTTCCGTGAAAAAGCACCACGTGATTCAGGAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp GTGTGCAAAGACTTAGGGTACCCCAGGTCACTTATGTaGACCACCAAACGATGCAATCCCACATCAGTAGGT +
Preference number: 6 (lower is better)
Translates to: VCKDLGYPRSLM*TTKRCNPTSVG
Trigger: ACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAACATAAGTGACCTGGGGTACCCTAAGTCTTTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp TACCTGAGGTCTATATTAGGAGGGTTATCATTTACATCGGTGACATaGATGGTAACCGTTGCTCGAGCAGGAGTGGAGCTGCCGTCACTA +
Preference number: 6 (lower is better)
Translates to: YLRSILGGLSFTSVT*MVTVARAGVELPSL
Trigger: TAGTGACGGCAGCTCCACTCCTGCTCGAGCAACGGTTACCATCAATGTCACCGATGTAAATGATAACCCTCCTAATATAGACCTCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp GCCTCAACCTTTCCCCTTTCCCAGTATGCTGCAGTTAGGAATGATTaGTTCCAACACATAGAAAGCCATGCATCTGGTAGCACCAGTTTG +
Preference number: 6 (lower is better)
Translates to: ASTFPLSQYAAVRND*FQHIESHASGSTSL
Trigger: CAAACTGGTGCTACCAGATGCATGGCTTTCTATGTGTTGGAACAAATCATTCCTAACTGCAGCATACTGGGAAAGGGGAAAGGTTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS CAA 90 bp GACTTCAGATTTGCCAGAGGAATGTCTGTCATGTGGCTGCCATTGTaGAAATGGCCTTCATTGGAGCCATACTGCTTACGGTCATTGAAC +
Preference number: 6 (lower is better)
Translates to: DFRFARGMSVMWLPL*KWPSLEPYCLRSLN
Trigger: GTTCAATGACCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAACAATGGCAGCCACATGACAGACATTCCTCTGGCAAATCTGAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS TCA 72 bp CCTACGGGAGCATTCTCTGGAATATGCACCTCCACTTaGCCCTCTTTAAACACTGGCCTGTTGTCATTTACA +
Preference number: 6 (lower is better)
Translates to: PTGAFSGICTST*PSLNTGLLSFT
Trigger: TGTAAATGACAACAGGCCAGTGTTTAAAGAGGGTCAAGTGGAGGTGCATATTCCAGAGAATGCTCCCGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TCAGCCGGCAGGCTTATTGTCCCATTGATAGGTTCATaGACTGCATCATCGGGTTTGGACTCTTCGATAGTA +
Preference number: 6 (lower is better)
Translates to: SAGRLIVPLIGS*TASSGLDSSIV
Trigger: TACTATCGAAGAGTCCAAACCCGATGATGCAGTTCATGAACCTATCAATGGGACAATAAGCCTGCCGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp CTGCCATTGTTGAAATGGCCTTCATTGGAGCCATACTaGTTACGGTCATTGAACTGGTTCCTGTTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LPLLKWPSLEPY*LRSLNWFLLLS
Trigger: AGACAGCAACAGGAACCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAACAATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS GCA 72 bp GAGTTGGTGCTCCTTAGGACTCTCAGTAGCACCTCCTaGTTGCTTATAAGACTTCAGATTTGCCAGAGGAAT +
Preference number: 6 (lower is better)
Translates to: ELVLLRTLSSTS*LLIRLQICQRN
Trigger: ATTCCTCTGGCAAATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAGAGTCCTAAGGAGCACCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CAA 72 bp TCTGTCATGTGGCTGCCATTGTTGAAATGGCCTTCATaGGAGCCATACTGCTTACGGTCATTGAACTGGTTC +
Preference number: 6 (lower is better)
Translates to: SVMWLPLLKWPS*EPYCLRSLNWF
Trigger: GAACCAGTTCAATGACCGTAAGCAGTATGGCTCCAATGAAGGCCATTTCAACAATGGCAGCCACATGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CAA 72 bp TTGGTGCTCCTTAGGACTCTCAGTAGCACCTCCTGCTaGCTTATAAGACTTCAGATTTGCCAGAGGAATGTC +
Preference number: 6 (lower is better)
Translates to: LVLLRTLSSTSC*LIRLQICQRNV
Trigger: GACATTCCTCTGGCAAATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAGAGTCCTAAGGAGCACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CAA 90 bp CTTCGGGCTGGCAAATTAGCAACTCCAGAGAACAAATTCACGGATTaGTCGTTAGTCATTCTCTCCACATTTCGTCTCTCTTACCCACTG +
Preference number: 6 (lower is better)
Translates to: LRAGKLATPENKFTD*SLVILSTFRLSYPL
Trigger: CAGTGGGTAAGAGAGACGAAATGTGGAGAGAATGACTAACGACAAATCCGTGAATTTGTTCTCTGGAGTTGCTAATTTGCCAGCCCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS CAA 90 bp TTCTTAGAGTTGGTGCTCCTTAGGACTCTCAGTAGCACCTCCTGCTaGCTTATAAGACTTCAGATTTGCCAGAGGAATGTCTGTCATGTG +
Preference number: 6 (lower is better)
Translates to: FLELVLLRTLSSTSC*LIRLQICQRNVCHV
Trigger: CACATGACAGACATTCCTCTGGCAAATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACTGAGAGTCCTAAGGAGCACCAACTCTAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS TCA 72 bp CTGTACACCATTGAAGCCTGTGTCAGGATCTGTTGCTaGTGGAATTGGAAAGCGGCTGTTGATCAAAGTGTT +
Preference number: 6 (lower is better)
Translates to: LYTIEACVRICC*WNWKAAVDQSV
Trigger: AACACTTTGATCAACAGCCGCTTTCCAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp CTTAAGTCTCTAACTTCTTGTAGGAAACGTCAGAGTTaGGGTGATGATGATTCTCTGACAGCTATCCGGGTG +
Preference number: 6 (lower is better)
Translates to: LKSLTSCRKRQS*GDDDSLTAIRV
Trigger: CACCCGGATAGCTGTCAGAGAATCATCATCACCGCAACTCTGACGTTTCCTACAAGAAGTTAGAGACTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS GCA 72 bp ACAAATTGCAAGAGGAAGCGTGCATGGACTGGAGGATaGATTATATCTCATCACTTATTTGGAGACAGCCGG +
Preference number: 6 (lower is better)
Translates to: TNCKRKRAWTGG*IISHHLFGDSR
Trigger: CCGGCTGTCTCCAAATAAGTGATGAGATATAATGCATCCTCCAGTCCATGCACGCTTCCTCTTGCAATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp AGTAGCACCTCCTGCTTGCTTATAAGACTTCAGATTTaGCAGAGGAATGTCTGTCATGTGGCTGCCATTGTT +
Preference number: 6 (lower is better)
Translates to: SSTSCLLIRLQI*QRNVCHVAAIV
Trigger: AACAATGGCAGCCACATGACAGACATTCCTCTGGCAAATCTGAAGTCTTATAAGCAAGCAGGAGGTGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
ENST00000617020.1
CDS CAA 72 bp TCTATATTAGGAGGGTTATCATTTACATCGGTGACATaGATGGTAACCGTTGCTCGAGCAGGAGTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SILGGLSFTSVT*MVTVARAGVEL
Trigger: CAGCTCCACTCCTGCTCGAGCAACGGTTACCATCAATGTCACCGATGTAAATGATAACCCTCCTAATATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp ATCCATGACGTTGATAGTTACTTTTGCAGTAGAGGAACGAGGTGGTaGTCCTCCATCAGTGGCTTTGACATCAAAAGTGTAGGAACTCTG +
Preference number: 6 (lower is better)
Translates to: IHDVDSYFCSRGTRW*SSISGFDIKSVGTL
Trigger: CAGAGTTCCTACACTTTTGATGTCAAAGCCACTGATGGAGGACAACCACCTCGTTCCTCTACTGCAAAAGTAACTATCAACGTCATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp CAGCTTTATTCTCTCCAGCATCTGCATCTGTCACTGTaGTTACCCCCACAGTACTATACTTTGGCAGATTCT +
Preference number: 6 (lower is better)
Translates to: QLYSLQHLHLSL*LPPQYYTLADS
Trigger: AGAATCTGCCAAAGTATAGTACTGTGGGGGTAATCACAGTGACAGATGCAGATGCTGGAGAGAATAAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp GTTGACCACCAAACGATGCAATCCCACATCAGTAGGTaGTGGTTTTTCTTCCAGAGTAATGTTACCTGTTAC +
Preference number: 6 (lower is better)
Translates to: VDHQTMQSHISR*WFFFQSNVTCY
Trigger: GTAACAGGTAACATTACTCTGGAAGAAAAACCAGCACCTACTGATGTGGGATTGCATCGTTTGGTGGTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp CGGCAGGCTTATTGTCCCATTGATAGGTTCATGAACTaGATCATCGGGTTTGGACTCTTCGATAGTAACAAA +
Preference number: 6 (lower is better)
Translates to: RQAYCPIDRFMN*IIGFGLFDSNK
Trigger: TTTGTTACTATCGAAGAGTCCAAACCCGATGATGCAGTTCATGAACCTATCAATGGGACAATAAGCCTGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CCA 72 bp TGGAATATGCACCTCCACTTGACCCTCTTTAAACACTaGCCTGTTGTCATTTACATCACTTACTGTGACCTG +
Preference number: 6 (lower is better)
Translates to: WNMHLHLTLFKH*PVVIYITYCDL
Trigger: CAGGTCACAGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAAAGAGGGTCAAGTGGAGGTGCATATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CCA 72 bp GACGTTGATAGTTACTTTTGCAGTAGAGGAACGAGGTaGTTGTCCTCCATCAGTGGCTTTGACATCAAAAGT +
Preference number: 6 (lower is better)
Translates to: DVDSYFCSRGTR*LSSISGFDIKS
Trigger: ACTTTTGATGTCAAAGCCACTGATGGAGGACAACCACCTCGTTCCTCTACTGCAAAAGTAACTATCAACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp TTTCCCCTTTCCCAGTATGCTGCAGTTAGGAATGATTaGTTCCAACACATAGAAAGCCATGCATCTGGTAGC +
Preference number: 6 (lower is better)
Translates to: FPLSQYAAVRND*FQHIESHASGS
Trigger: GCTACCAGATGCATGGCTTTCTATGTGTTGGAACAAATCATTCCTAACTGCAGCATACTGGGAAAGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS CAA 72 bp ATCAGCCCAGTAGTATTATTTAAAGCAAAGAGTCTTTaGGTTGCAGGGGCGACCTGGGCACCAAAAATGTAC +
Preference number: 6 (lower is better)
Translates to: ISPVVLFKAKSL*VAGATWAPKMY
Trigger: GTACATTTTTGGTGCCCAGGTCGCCCCTGCAACCAAAAGACTCTTTGCTTTAAATAATACTACTGGGCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp CTCAAGTTCAAAGAAACACTCATTCTCCTCAGCATATaGGGCGCCAGCACAGAGTTTTTCTCTGTCTATTCT +
Preference number: 6 (lower is better)
Translates to: LKFKETLILLSI*GASTEFFSVYS
Trigger: AGAATAGACAGAGAAAAACTCTGTGCTGGCGCCTCATATGCTGAGGAGAATGAGTGTTTCTTTGAACTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp AAAAATGTACCGGATTTCAGCATTACTGCCTATATCTaGATCAGTGGCATGGAGCTGAATTACAGAGGTACC +
Preference number: 6 (lower is better)
Translates to: KNVPDFSITAYI*ISGMELNYRGT
Trigger: GGTACCTCTGTAATTCAGCTCCATGCCACTGATGCAGATATAGGCAGTAATGCTGAAATCCGGTACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp AATGGAAAGAGTCACAGCTTTATTCTCTCCAGCATCTaGATCTGTCACTGTGATTACCCCCACAGTACTATA +
Preference number: 6 (lower is better)
Translates to: NGKSHSFILSSI*ICHCDYPHSTI
Trigger: TATAGTACTGTGGGGGTAATCACAGTGACAGATGCAGATGCTGGAGAGAATAAAGCTGTGACTCTTTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS GCA 72 bp ACTGGCACGTTAATACTGGTTGACTGGGCACTTGTATaGAGTACTTATAGACCAGTAAAAGTGCTCGTTTAC +
Preference number: 6 (lower is better)
Translates to: TGTLILVDWALV*STYRPVKVLVY
Trigger: GTAAACGAGCACTTTTACTGGTCTATAAGTACTGCATACAAGTGCCCAGTCAACCAGTATTAACGTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS CAA 72 bp GTTGATAGTTACTTTTGCAGTAGAGGAACGAGGTGGTaGTCCTCCATCAGTGGCTTTGACATCAAAAGTGTA +
Preference number: 6 (lower is better)
Translates to: VDSYFCSRGTRW*SSISGFDIKSV
Trigger: TACACTTTTGATGTCAAAGCCACTGATGGAGGACAACCACCTCGTTCCTCTACTGCAAAAGTAACTATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp AAGGAAGTATTAGACGGTGGAGAAATGACAACTGGGCTGTTGTCATaGACATCCATGACGTTGATAGTTACTTTTGCAGTAGAGGAACGA +
Preference number: 6 (lower is better)
Translates to: KEVLDGGEMTTGLLS*TSMTLIVTFAVEER
Trigger: TCGTTCCTCTACTGCAAAAGTAACTATCAACGTCATGGATGTCAATGACAACAGCCCAGTTGTCATTTCTCCACCGTCTAATACTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TTCTTTTCCTGGATTTTAGGGTTTAAAGGTTTCCACTaGGGAATGATGCACAAATTGCAAGAGGAAGCGTGC +
Preference number: 6 (lower is better)
Translates to: FFSWILGFKGFH*GMMHKLQEEAC
Trigger: GCACGCTTCCTCTTGCAATTTGTGCATCATTCCTCAGTGGAAACCTTTAAACCCTAAAATCCAGGAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TCTGCCCATTTAACAATTCATAATGCTGTACACCATTaGAGCCTGTGTCAGGATCTGTTGCTGATGGAATTG +
Preference number: 6 (lower is better)
Translates to: SAHLTIHNAVHH*SLCQDLLLMEL
Trigger: CAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAGCATTATGAATTGTTAAATGGGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp GGCAAATTAGCAACTCCAGAGAACAAATTCACGGATTaGTCGTTAGTCATTCTCTCCACATTTCGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: GKLATPENKFTD*SLVILSTFRLS
Trigger: AGAGAGACGAAATGTGGAGAGAATGACTAACGACAAATCCGTGAATTTGTTCTCTGGAGTTGCTAATTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000544246.5
CDS CAA 90 bp GGCGCTGCGAATTTGTGGCTCATATTACAATTCTATTTTACAGCATaGGTCTGGAGTTTATTCAGAGAGAATATCTCAAGTAAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: GAANLWLILQFYFTA*VWSLFRENISSKGV
Trigger: CACTCCCTTACTTGAGATATTCTCTCTGAATAAACTCCAGACCAATGCTGTAAAATAGAATTGTAATATGAGCCACAAATTCGCAGCGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614931.1
CDS CCA 72 bp AACAATAGACATACTGGCACGTTAATACTGGTTGACTaGGCACTTGTATGCAGTACTTATAGACCAGTAAAA +
Preference number: 6 (lower is better)
Translates to: NNRHTGTLILVD*ALVCSTYRPVK
Trigger: TTTTACTGGTCTATAAGTACTGCATACAAGTGCCCAGTCAACCAGTATTAACGTGCCAGTATGTCTATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377861.4
CDS CCA 72 bp CAAATATTGGTTGTCATATACCGCCTTCAAATGAAATaGGACCTCTCTTTCAATAAAACAGATCACTTTGCC +
Preference number: 6 (lower is better)
Translates to: QILVVIYRLQMK*DLSFNKTDHFA
Trigger: GGCAAAGTGATCTGTTTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATATGACAACCAATATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 72 bp TTACCTGTTACTGGATCAATCCGGAATAAGCCTTTATaGTTTCCACTCACTATAGTATACTTTAGTTCAGCG +
Preference number: 6 (lower is better)
Translates to: LPVTGSIRNKPL*FPLTIVYFSSA
Trigger: CGCTGAACTAAAGTATACTATAGTGAGTGGAAACAATAAAGGCTTATTCCGGATTGATCCAGTAACAGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS CAA 90 bp AGAGTAATGTTACCTGTTACTGGATCAATCCGGAATAAGCCTTTATaGTTTCCACTCACTATAGTATACTTTAGTTCAGCGTTCATTCCA +
Preference number: 6 (lower is better)
Translates to: RVMLPVTGSIRNKPL*FPLTIVYFSSAFIP
Trigger: TGGAATGAACGCTGAACTAAAGTATACTATAGTGAGTGGAAACAATAAAGGCTTATTCCGGATTGATCCAGTAACAGGTAACATTACTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5
CDS TCA 72 bp TCTAACAAATATTGGTTGTCATATACCGCCTTCAAATaGAATGGGACCTCTCTTTCAATAAAACAGATCACT +
Preference number: 6 (lower is better)
Translates to: SNKYWLSYTAFK*NGTSLSIKQIT
Trigger: AGTGATCTGTTTTATTGAAAGAGAGGTCCCATTTCATTTGAAGGCGGTATATGACAACCAATATTTGTTAGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377861.4
ENST00000377865.7
ENST00000456367.5
ENST00000544246.5