RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH19 (Homo sapiens)

Ensembl gene IDs: ENSG00000165194

Ensembl transcript IDs: ENST00000255531.8, ENST00000373034.8, ENST00000420881.6, ENST00000464981.1

Found 1060 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCTTTTCCACTCTGGATGCCCAATCGAGCTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCTTTGTCCTTGCTGCTTCAAGTGGAC +
Preference number: 1 (lower is better)
Translates to: ILFHSGCPIELSPSP*LSLNCPLSLLLQVD
Trigger: GTCCACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 90 bp GTAAGAGGCATGGCAGCCAGTGGCCTCTCTGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTTTCCACAATCTTTTCTGCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: VRGMAASGLSGSTAT*QLMFPLSTIFSAPW
Trigger: CCAGGGAGCAGAAAAGATTGTGGAAAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCTGCCATGCCTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp CCAGAACTGCTATTATGTACAATAATAATCCTTTTCCACTCTGGATaGCCAATCGAGCTATCCCCTTCACCCTGCCTCTCCCTAAACTGC +
Preference number: 1 (lower is better)
Translates to: PELLLCTIIILFHSG*PIELSPSPCLSLNC
Trigger: GCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATTATTATTGTACATAATAGCAGTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 90 bp CCAGCCAGAACTGCTATTATGTACAATAATAATCCTTTTCCACTCTaGATGCCCAATCGAGCTATCCCCTTCACCCTGCCTCTCCCTAAA +
Preference number: 1 (lower is better)
Translates to: PARTAIMYNNNPFPL*MPNRAIPFTLPLPK
Trigger: TTTAGGGAGAGGCAGGGTGAAGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATTATTATTGTACATAATAGCAGTTCTGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp AGGTACAGCCTGCCTACAAAACCAGTTTACAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGG +
Preference number: 1 (lower is better)
Translates to: RYSLPTKPVYKAFLV*TCASERTHTSDNCG
Trigger: CCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTTGTAAACTGGTTTTGTAGGCAGGCTGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp AACAGCCACGTGACAATTAATGTTCCCACTTTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAGCATAGCAAGAAATACACCTGTAGA +
Preference number: 1 (lower is better)
Translates to: NSHVTINVPTFHNLF*SLVPTEHSKKYTCR
Trigger: TCTACAGGTGTATTTCTTGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAAAGTGGGAACATTAATTGTCACGTGGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp CATGAGCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACAAAACCAGTTTACAAAGCCTTCCTA +
Preference number: 1 (lower is better)
Translates to: HEPKGNLGSLLRMPI*RYSLPTKPVYKAFL
Trigger: TAGGAAGGCTTTGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp GTGACCCACAAGCCAATTCCAGCGGCACAAGAAAACGAAGAGAGCTaGAACAACTTCATTAGGACAATGTGTTTTGCTCTGGAATATTTC +
Preference number: 1 (lower is better)
Translates to: VTHKPIPAAQENEES*NNFIRTMCFALEYF
Trigger: GAAATATTCCAGAGCAAAACACATTGTCCTAATGAAGTTGTTGCAGCTCTCTTCGTTTTCTTGTGCCGCTGGAATTGGCTTGTGGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 90 bp AAAATGACTTTCTGCAATGATCTATCATGGACCTGGGCAGACCACTaGAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTAC +
Preference number: 1 (lower is better)
Translates to: KMTFCNDLSWTWADH*KAGKILCKVVSNHY
Trigger: GTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCTGCCCAGGTCCATGATAGATCATTGCAGAAAGTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 90 bp TTAGGAAAAGCTCTGAAATATAGCCACTCAAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGT +
Preference number: 1 (lower is better)
Translates to: LGKALKYSHSRTNHW*AIKTRSSCFFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCTTGAGTGGCTATATTTCAGAGCTTTTCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp CTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAATGACCTACAATaGTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAA +
Preference number: 1 (lower is better)
Translates to: LEQQSASSVFPNDLQ*FPIKIRCLWVILYQ
Trigger: TTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGGGAAAACTGATGATGCTGACTGTTGCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 90 bp CAACTTTCAGTTAGTAACAAGGTCATCTTGAATTGCCAACACAGCTaGAGCAACAGTCAGCATCATCAGTTTTCCCTAATGACCTACAAT +
Preference number: 1 (lower is better)
Translates to: QLSVSNKVILNCQHS*SNSQHHQFSLMTYN
Trigger: ATTGTAGGTCATTAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTTGTTACTAACTGAAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 90 bp CCACTGAGCATAGCAAGAAATACACCTGTAGAAAACTGTGAAGTCTaGCTTCAAAGTGACCTTGAAATCGTAGCTAATAACATAATATCA +
Preference number: 1 (lower is better)
Translates to: PLSIARNTPVENCEV*LQSDLEIVANNIIS
Trigger: TGATATTATGTTATTAGCTACGATTTCAAGGTCACTTTGAAGTCAGACTTCACAGTTTTCTACAGGTGTATTTCTTGCTATGCTCAGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 90 bp GTTTCACAAAAGCAATATGATTCCTATTTGAAATTAATTCACTTTTaGACAACAAGTGACCCACAAGCCAATTCCAGCGGCACAAGAAAA +
Preference number: 1 (lower is better)
Translates to: VSQKQYDSYLKLIHF*TTSDPQANSSGTRK
Trigger: TTTTCTTGTGCCGCTGGAATTGGCTTGTGGGTCACTTGTTGTGCAAAAGTGAATTAATTTCAAATAGGAATCATATTGCTTTTGTGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGCCAGTGGCCTCTCTaGCTCAACAGCCACGTGACA +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSQWPL*LNSHVT
Trigger: TGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCT +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLSPSP*LSLNCP
Trigger: AGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATACCCCTGCTGCCTGTTaGAACAAGGGACTGTCACAG +
Preference number: 2 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHTPAAC*NKGLSQ
Trigger: CTGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACTAATTTGCTCCAACTaGACACCCCTGCTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLICSN*TPLLPV
Trigger: AACAGGCAGCAGGGGTGTTCAGTTGGAGCAAATTAG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAAT +
Preference number: 2 (lower is better)
Translates to: LVCTCASERTHTSDNCGELNPSP*RALQSN
Trigger: ATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCT +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLSPSP*LSLNCP
Trigger: AGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGACCCCTGCTGCCTGTTaGAACAAGGGACTGTCACAG +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQETPAAC*NKGLSQ
Trigger: CTGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: LVCTCASERTHTSDNCGEGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTATGCACTTGTGCTTCTaGGAGGACTCATACATCAGA +
Preference number: 2 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPMHLCF*EDSYIR
Trigger: TCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCAT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPKAFLV*TCASER
Trigger: CCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGCCCTTTGTCCTTGCTaGTTCAAGTGGACCACTTTT +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLALCPC*FKWTTF
Trigger: AAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATGCCTCTCCCTAAACTaGCCTTTGTCCTTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKCLSLN*PLSLLL
Trigger: AAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGATACAGAGCAACATaGAGTTCTCAATCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLRYRAT*SSQSQP
Trigger: GGGCTGGGATTGAGAACTCCATGTTGCTCTGTATCT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACCCCAGAAAGTGGATTaGAATTCCAGCCAGAACTGC +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKPQKVD*NSSQNC
Trigger: GCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKNIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCAACTGAACACCCCTaGTGCCTGTTGAAACAAGGG +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPTEHP*CLLKQG
Trigger: CCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGTTGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKFHNLF*SLVPTE
Trigger: CTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACA +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLRMPI*RYSLPT
Trigger: TGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGCCCTTTGTCCTTGCTaGTTCAAGTGGACCACTTTT +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYALCPC*FKWTTF
Trigger: AAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTACTGCCCTTTGTCCTTaGTGCTTCAAGTGGACCACT +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSTALCP*CFKWTT
Trigger: AGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCT +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLSPSP*LSLNCP
Trigger: AGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTAATTTGCTCCAACTaGACACCCCTGCTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELICSN*TPLLPV
Trigger: AACAGGCAGCAGGGGTGTTCAGTTGGAGCAAATTAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSNIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCAGGAAGTGTGTGTCTaGAGAGATGCTAATTTAGAT +
Preference number: 2 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPQEVCV*RDANLD
Trigger: ATCTAAATTAGCATCTCTTCAGACACACACTTCCTG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACTGAACACCCCTGCTaGCTGTTGAAACAAGGGACT +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTEHPC*LLKQGT
Trigger: AGTCCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCAACTGAACACCCCTaGTGCCTGTTGAAACAAGGG +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPTEHP*CLLKQG
Trigger: CCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGTTGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGATCCTTGCTCAGAATaGCTATTTGCAGGTACAGCC +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSDPCSE*LFAGTA
Trigger: GGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTGCCTCTCCCTAAACTaGCCTTTGTCCTTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLCLSLN*PLSLLL
Trigger: AAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTCAGAAACAACCTTTTaGGGGCTCAATTTCACATCA +
Preference number: 2 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSETTF*GLNFTS
Trigger: TGATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGATACAGAGCAACATaGAGTTCTCAATCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRYRAT*SSQSQP
Trigger: GGGCTGGGATTGAGAACTCCATGTTGCTCTGTATCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTAATTTGCTCCAACTaGACACCCCTGCTGCCTGTT +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLICSN*TPLLPV
Trigger: AACAGGCAGCAGGGGTGTTCAGTTGGAGCAAATTAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLNIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAATCTGACTGCCCACTaGGAACAAAGTATTTGGATA +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLNLTAH*EQSIWI
Trigger: TATCCAAATACTTTGTTCTCAGTGGGCAGTCAGATT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACATTCAACATCAAAATaGTCCCCAGAAAGTGGATTG +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHSTSK*SPESGL
Trigger: CAATCCACTTTCTGGGGATCATTTTGATGTTGAATG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 2 (lower is better)
Translates to: LVCTCASERTHTSDNCGELQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTTTGCAGGTACAGCCTaGCTACAAAACCAGTTTACA +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYFAGTA*LQNQFT
Trigger: TGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGATCCTTGCTCAGAATaGCTATTTGCAGGTACAGCC +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSDPCSE*LFAGTA
Trigger: GGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATCAGAAACAACCTTTTaGGGGCTCAATTTCACATCA +
Preference number: 2 (lower is better)
Translates to: LVCTCASERTHTSDNCGESETTF*GLNFTS
Trigger: TGATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAGATACAGAGCAACATaGAGTTCTCAATCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLRYRAT*SSQSQP
Trigger: GGGCTGGGATTGAGAACTCCATGTTGCTCTGTATCT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGAAGGCACAGTAATTaGATTAGCGATGCTGTTACC +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRRHSN*ISDAVT
Trigger: GGTAACAGCATCGCTAATCCAATTACTGTGCCTTCT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATCTTTTCTGCTCCCTaGTTCCCACTGAGCATAGCA +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLIFSAP*FPLSIA
Trigger: TGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGATAGGGAAGAAGGATaGATCTATAGCTTGAAGATG +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLDREEG*IYSLKM
Trigger: CATCTTCAAGCTATAGATCCATCCTTCTTCCCTATC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGAAGTATACCTGTCTaGGGAATTGCCAAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRSIPV*GIAKAV
Trigger: AACTGCTTTGGCAATTCCCCAGACAGGTATACTTCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAATCCTTTTCCACTCTaGATGCCCAATCGAGCTATC +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSNPFPL*MPNRAI
Trigger: GATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACAGCCTATCCAAAAATaGCTTTCTGCAATGATCTAT +
Preference number: 2 (lower is better)
Translates to: LVCTCASERTHTSDNCGEQPIQK*LSAMIY
Trigger: ATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAAT +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELNPSP*RALQSN
Trigger: ATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATGAGTTCAAGTGTCTaGGTGTCTCCGTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLMSSSV*VSPFRR
Trigger: CCTTCTAAACGGAGACACTCAGACACTTGAACTCAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAATCTGACTGCCCACTaGGAACAAAGTATTTGGATA +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKNLTAH*EQSIWI
Trigger: TATCCAAATACTTTGTTCTCAGTGGGCAGTCAGATT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGATGCACTTGTGCTTCTaGGAGGACTCATACATCAGA +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEMHLCF*EDSYIR
Trigger: TCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCAT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACTGAACACCCCTGCTaGCTGTTGAAACAAGGGACT +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETEHPC*LLKQGT
Trigger: AGTCCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTATATGCATGGTGTTaGTCATTCATTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLYAWC*SFICCL
Trigger: GAGACAGCAAATGAATGAGCAACACCATGCATATAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGCAGGAAAAATACTTTaGAAAGTGGTGAGCAATCAC +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYAGKIL*KVVSNH
Trigger: GTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACCAAAAATGACTTTCTaGAATGATCTATCATGGACC +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLPKMTF*NDLSWT
Trigger: GGTCCATGATAGATCATTGCAGAAAGTCATTTTTGG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACA +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLRMPI*RYSLPT
Trigger: TGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGAAGGCACAGTAATTaGATTAGCGATGCTGTTACC +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRRHSN*ISDAVT
Trigger: GGTAACAGCATCGCTAATCCAATTACTGTGCCTTCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATCTTTTCTGCTCCCTaGTTCCCACTGAGCATAGCA +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYIFSAP*FPLSIA
Trigger: TGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAATCCTTTTCCACTCTaGATGCCCAATCGAGCTATC +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSNPFPL*MPNRAI
Trigger: GATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAAGATCAGGTGTTTGTaGGTTATTCTTTACCAAGAG +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLKIRCL*VILYQE
Trigger: CTCTTGGTAAAGAATAACCCACAAACACCTGATCTT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 90 bp ACCTTAGGTGCAATTTTGGATGAAGAAGTATACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTAAAGCATGTCACACTTCAACACCAA +
Preference number: 2 (lower is better)
Translates to: TLGAILDEEVYLSGE*PKQLSLKHVTLQHQ
Trigger: TTGGTGTTGAAGTGTGACATGCTTTAATGATAACTGCTTTGGCAATTCCCCAGACAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 90 bp GTTTTCCCTAATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTaGTGGGTTATTCTTTACCAAGAGCGCCTTCCAATCTATGTATCA +
Preference number: 2 (lower is better)
Translates to: VFPNDLQCFPIKIRC*WVILYQERLPIYVS
Trigger: TGATACATAGATTGGAAGGCGCTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGGGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 2 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHRTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCAGCCTATCCAAAAATaGCTTTCTGCAATGATCTAT +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYQPIQK*LSAMIY
Trigger: ATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATGAGTTCAAGTGTCTaGGTGTCTCCGTTTAGAAGG +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYMSSSV*VSPFRR
Trigger: CCTTCTAAACGGAGACACTCAGACACTTGAACTCAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCGAAATCACTCCCTTaGGTTTATGTGTGCAACATG +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPKSLP*VYVCNM
Trigger: CATGTTGCACACATAAACTCAAGGGAGTGATTTCGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAAAACAAGAAGCTCCTaGTTCTTCACTAGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELKTRSS*FFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGTATTTCTGACAACTaGAAATTAGATAGCAGCCTA +
Preference number: 2 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSISDN*KLDSSL
Trigger: TAGGCTGCTATCTAATTTGCAGTTGTCAGAAATACT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAG +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEFHNLF*SLVPTE
Trigger: CTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYKAFLV*TCASER
Trigger: CCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCAAACTTGTCAGAATaGTTTGGGGGAACATTCAAC +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPNLSE*FGGTFN
Trigger: GTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCCTAATGACCTACAATaGTTTCCAATCAAGATCAGG +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSPNDLQ*FPIKIR
Trigger: CCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTCAATCTATATGCATaGTGTTGCTCATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLNLYA*CCSFIC
Trigger: GCAAATGAATGAGCAACACCATGCATATAGATTGAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAGAAGGCACAGTAATTaGATTAGCGATGCTGTTACC +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSRRHSN*ISDAVT
Trigger: GGTAACAGCATCGCTAATCCAATTACTGTGCCTTCT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGATAGGGAAGAAGGATaGATCTATAGCTTGAAGATG +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSDREEG*IYSLKM
Trigger: CATCTTCAAGCTATAGATCCATCCTTCTTCCCTATC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAAAAGGGAGAATATTTaGCCCTGTGAACCTTGTAGC +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEKRENI*PCEPCS
Trigger: GCTACAAGGTTCACAGGGCCAAATATTCTCCCTTTT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAGAAGTATACCTGTCTaGGGAATTGCCAAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLRSIPV*GIAKAV
Trigger: AACTGCTTTGGCAATTCCCCAGACAGGTATACTTCT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTGATTAGAGATCAGTaGATCACTAAGCGAACAATT +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLIRDQ*ITKRTI
Trigger: AATTGTTCGCTTAGTGATCCACTGATCTCTAATCAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGATGATACTCTTGAGTaGTTCCAATTTTCAGAGATC +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYDDTLE*FQFSEI
Trigger: GATCTCTGAAAATTGGAACCACTCAAGAGTATCATC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTTGTCAGAATGCTTTaGGGGAACATTCAACATCAA +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLVRML*GNIQHQ
Trigger: TTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 90 bp CCAGTAAAAATCTACTTAACCAGTGCTGTAATGGTGTTAGCTGGTTaGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCA +
Preference number: 2 (lower is better)
Translates to: PVKIYLTSAVMVLAG*FAKVDSNFQLVTRS
Trigger: TGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGCTAACACCATTACAGCACTGGTTAAGTAGATTTTTACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGTAGTATTCAGCACTaGATAAGAAATAAGGATGGA +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGSIQH*IRNKDG
Trigger: TCCATCCTTATTTCTTATTCAGTGCTGAATACTACC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCAGTCAGTCATATGCTaGAGTAACACTATCAAGATG +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLQSVIC*SNTIKM
Trigger: CATCTTGATAGTGTTACTTCAGCATATGACTGACTG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCATTCAACATCAAAATaGTCCCCAGAAAGTGGATTG +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSHSTSK*SPESGL
Trigger: CAATCCACTTTCTGGGGATCATTTTGATGTTGAATG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGCTGTCTCAGTTGTTTaGACTTTGTTTTTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSAVSVV*TLFLSV
Trigger: TACAGACAAAAACAAAGTGCAAACAACTGAGACAGC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTATATGCATGGTGTTaGTCATTCATTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLYAWC*SFICCL
Trigger: GAGACAGCAAATGAATGAGCAACACCATGCATATAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATATACACTTTGTACTaGTTACTCTATCCCTACGTA +
Preference number: 2 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKIYTLY*LLYPYV
Trigger: TACGTAGGGATAGAGTAAGCAGTACAAAGTGTATAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAATGAACTCTTAGGCTaGAAAAATACTATGTTGGCT +
Preference number: 2 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYNELLG*KNTMLA
Trigger: AGCCAACATAGTATTTTTGCAGCCTAAGAGTTCATT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 2 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTCAATCTATATGCATaGTGTTGCTCATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLNLYA*CCSFIC
Trigger: GCAAATGAATGAGCAACACCATGCATATAGATTGAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCAGCCTATCCAAAAATaGCTTTCTGCAATGATCTAT +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSQPIQK*LSAMIY
Trigger: ATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAGGAAGTGTGTGTCTaGAGAGATGCTAATTTAGAT +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYQEVCV*RDANLD
Trigger: ATCTAAATTAGCATCTCTTCAGACACACACTTCCTG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGCTGTCTCAGTTGTTTaGACTTTGTTTTTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELAVSVV*TLFLSV
Trigger: TACAGACAAAAACAAAGTGCAAACAACTGAGACAGC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTATATGCATGGTGTTaGTCATTCATTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLYAWC*SFICCL
Trigger: GAGACAGCAAATGAATGAGCAACACCATGCATATAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTCAATCTATATGCATaGTGTTGCTCATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLNLYA*CCSFIC
Trigger: GCAAATGAATGAGCAACACCATGCATATAGATTGAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTGATTAGAGATCAGTaGATCACTAAGCGAACAATT +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLIRDQ*ITKRTI
Trigger: AATTGTTCGCTTAGTGATCCACTGATCTCTAATCAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGCTGTCTCAGTTGTTTaGACTTTGTTTTTGTCTGTA +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYAVSVV*TLFLSV
Trigger: TACAGACAAAAACAAAGTGCAAACAACTGAGACAGC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAGTACTCAATCTATATaGATGGTGTTGCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSTQSI*MVLLIH
Trigger: ATGAATGAGCAACACCATGCATATAGATTGAGTACT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGCAGGAAAAATACTTTaGAAAGTGGTGAGCAATCAC +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEAGKIL*KVVSNH
Trigger: GTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCAAAAATGACTTTCTaGAATGATCTATCATGGACC +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPKMTF*NDLSWT
Trigger: GGTCCATGATAGATCATTGCAGAAAGTCATTTTTGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAGTATTTCTGACAACTaGAAATTAGATAGCAGCCTA +
Preference number: 2 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSISDN*KLDSSL
Trigger: TAGGCTGCTATCTAATTTGCAGTTGTCAGAAATACT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTTGTCAGAATGCTTTaGGGGAACATTCAACATCAA +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELVRML*GNIQHQ
Trigger: TTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGTACTCAATCTATATaGATGGTGTTGCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSTQSI*MVLLIH
Trigger: ATGAATGAGCAACACCATGCATATAGATTGAGTACT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGTATTTCTGACAACTaGAAATTAGATAGCAGCCTA +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSISDN*KLDSSL
Trigger: TAGGCTGCTATCTAATTTGCAGTTGTCAGAAATACT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATATACACTTTGTACTaGTTACTCTATCCCTACGTA +
Preference number: 2 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYIYTLY*LLYPYV
Trigger: TACGTAGGGATAGAGTAAGCAGTACAAAGTGTATAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGTACTCAATCTATATaGATGGTGTTGCTCATTCAT +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESTQSI*MVLLIH
Trigger: ATGAATGAGCAACACCATGCATATAGATTGAGTACT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAATGAACTCTTAGGCTaGAAAAATACTATGTTGGCT +
Preference number: 2 (lower is better)
Translates to: KNNISIHFSVSRYNLTHENELLG*KNTMLA
Trigger: AGCCAACATAGTATTTTTGCAGCCTAAGAGTTCATT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 72 bp TTGGCTGGTAAGAGGCATGGCAGCCAGTGGCCTCTCTaGCTCAACAGCCACGTGACAATTAATGTTCCCACT +
Preference number: 3 (lower is better)
Translates to: LAGKRHGSQWPL*LNSHVTINVPT
Trigger: AGTGGGAACATTAATTGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCTGCCATGCCTCTTACCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCAC +
Preference number: 3 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLNCPLS*LLQVDH
Trigger: GTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKAQNAY*QVQPAY
Trigger: GTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 3 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSAQNAY*QVQPAY
Trigger: GTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCAC +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSNCPLS*LLQVDH
Trigger: GTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATCCCCAGAAAGTGGATaGGAATTCCAGCCAGAACTG +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSPESG*EFQPEL
Trigger: CAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp CTATTATGTACAATAATAATCCTTTTCCACTCTGGATaGCCAATCGAGCTATCCCCTTCACCCTGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: LLCTIIILFHSG*PIELSPSPCLS
Trigger: GGAGAGGCAGGGTGAAGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATTATTATTGTACATAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 72 bp ATCCCTACGTATATAAGCCTAAGATACAGAGCAACATaGAGTTCTCAATCCCAGCCCATGACGTGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: IPTYISLRYRAT*SSQSQPMTCFA
Trigger: TGCAAAGCACGTCATGGGCTGGGATTGAGAACTCCATGTTGCTCTGTATCTTAGGCTTATATACGTAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 3 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAGCAAAGTAGCGGCATaGGGAAGTACTCGAGCTTCA +
Preference number: 3 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSKVAA*GSTRAS
Trigger: TGAAGCTCGAGTACTTCCCAATGCCGCTACTTTGCT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAGCCACACCAATATTTaGCATGAGGTAGTATTCAGC +
Preference number: 3 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSHTNI*HEVVFS
Trigger: GCTGAATACTACCTCATGCAAAATATTGGTGTGGCT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 3 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCCCCAGAAAGTGGATaGGAATTCCAGCCAGAACTG +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSPESG*EFQPEL
Trigger: CAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp TTAGATAGCAGCCTATCCAAAAATGACTTTCTGCAATaGTCTATCATGGACCTGGGCAGACCACTGAAAGGC +
Preference number: 3 (lower is better)
Translates to: LDSSLSKNDFLQ*SIMDLGRPLKG
Trigger: GCCTTTCAGTGGTCTGCCCAGGTCCATGATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTGCTATCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp GATACAGAGCAACATGGAGTTCTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAATTCTAATCATGATTGG +
Preference number: 3 (lower is better)
Translates to: DTEQHGVLNPSP*RALQSNSNHDW
Trigger: CCAATCATGATTAGAATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAGAACTCCATGTTGCTCTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp CTGCCTACAAAACCAGTTTACAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGGACTCATACATCAGAC +
Preference number: 3 (lower is better)
Translates to: LPTKPVYKAFLV*TCASERTHTSD
Trigger: GTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTTGTAAACTGGTTTTGTAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp CAGCAACAGAGACTGCTTAATGAGACATACTGTACTTaGATCCCTCTAAATTTCCACCCTGGTTTGACAGGT +
Preference number: 3 (lower is better)
Translates to: QQQRLLNETYCT*IPLNFHPGLTG
Trigger: ACCTGTCAAACCAGGGTGGAAATTTAGAGGGATGCAAGTACAGTATGTCTCATTAAGCAGTCTCTGTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGGAAATTTAGGATCCTaGCTCAGAATGCCTATTTGC +
Preference number: 3 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLGNLGS*LRMPIC
Trigger: GCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTCCCCAGAAAGTGGATaGGAATTCCAGCCAGAACTG +
Preference number: 3 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESPESG*EFQPEL
Trigger: CAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp CTTAGCATTCAAATAGCACAAGGAGGTATTTGTTGCTaGTTTCTAGCTCGAGCTAGTCTGGCTCTTGGTCAT +
Preference number: 3 (lower is better)
Translates to: LSIQIAQGGICC*FLARASLALGH
Trigger: ATGACCAAGAGCCAGACTAGCTCGAGCTAGAAATCAGCAACAAATACCTCCTTGTGCTATTTGAATGCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp GTGACAATTAATGTTCCCACTTTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAGCATAGCAAGAAATAC +
Preference number: 3 (lower is better)
Translates to: VTINVPTFHNLF*SLVPTEHSKKY
Trigger: GTATTTCTTGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAAAGTGGGAACATTAATTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 72 bp GTTAGTAACAAGGTCATCTTGAATTGCCAACACAGCTaGAGCAACAGTCAGCATCATCAGTTTTCCCTAATG +
Preference number: 3 (lower is better)
Translates to: VSNKVILNCQHS*SNSQHHQFSLM
Trigger: CATTAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTTGTTACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATTCAGAAACAACCTTTaGGGGGCTCAATTTCACATC +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKFRNNL*GAQFHI
Trigger: GATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGAA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGCAAAGTAGCGGCATaGGGAAGTACTCGAGCTTCA +
Preference number: 3 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSKVAA*GSTRAS
Trigger: TGAAGCTCGAGTACTTCCCAATGCCGCTACTTTGCT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGTGTTGCTCATTCATTaGCTGTCTCAGTTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKVLLIH*LSQLFA
Trigger: TGCAAACAACTGAGACAGCAAATGAATGAGCAACAC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGGCAGGAAAAATACTTaGCAAAGTGGTGAGCAATCA +
Preference number: 3 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYGRKNT*QSGEQS
Trigger: TGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTACAGCAAAAAGAGTaGGCTAAATCGAAAGGATTT +
Preference number: 3 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLQQKE*AKSKGF
Trigger: AAATCCTTTCGATTTAGCCAACTCTTTTTGCTGTAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTGAGAACAAAGTATTaGGATAGGGAAGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLRTKY*DREEGW
Trigger: CCATCCTTCTTCCCTATCCAAATACTTTGTTCTCAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGGAAATTTAGGATCCTaGCTCAGAATGCCTATTTGC +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKGNLGS*LRMPIC
Trigger: GCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACCTTAGGTGCAATTTaGGATGAAGAAGTATACCTG +
Preference number: 3 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTLGAI*DEEVYL
Trigger: CAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp GCTCTGAAATATAGCCACTCAAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGCTCCTGCTTCTTCACT +
Preference number: 3 (lower is better)
Translates to: ALKYSHSRTNHW*AIKTRSSCFFT
Trigger: AGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCTTGAGTGGCTATATTTCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp AGTTTACAAAGCCTTCCTAGTATGCACTTGTGCTTCTaGGAGGACTCATACATCAGACAATTGTGGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SLQSLPSMHLCF*EDSYIRQLWGK
Trigger: TTTTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTTGTAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp AAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACAAAACCAGTTTACAAA +
Preference number: 3 (lower is better)
Translates to: KGNLGSLLRMPI*RYSLPTKPVYK
Trigger: TTTGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAACCTTAGGTGCAATTTaGGATGAAGAAGTATACCTG +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKTLGAI*DEEVYL
Trigger: CAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACCCCAAACATCCCCTTaGAATATTACTTTGTTACAT +
Preference number: 3 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLPQTSP*NITLLH
Trigger: ATGTAACAAAGTAATATTCAAAGGGGATGTTTGGGG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATTCAGAAACAACCTTTaGGGGGCTCAATTTCACATC +
Preference number: 3 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELFRNNL*GAQFHI
Trigger: GATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGAA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGTGTTGCTCATTCATTaGCTGTCTCAGTTGTTTGCA +
Preference number: 3 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELVLLIH*LSQLFA
Trigger: TGCAAACAACTGAGACAGCAAATGAATGAGCAACAC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCTATATGCATGGTGTaGCTCATTCATTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSICMV*LIHLLS
Trigger: AGACAGCAAATGAATGAGCAACACCATGCATATAGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGGCAGGAAAAATACTTaGCAAAGTGGTGAGCAATCA +
Preference number: 3 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSGRKNT*QSGEQS
Trigger: TGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATCCAAAATATACACTTaGTACTGCTTACTCTATCCC +
Preference number: 3 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSKIYT*YCLLYP
Trigger: GGGATAGAGTAAGCAGTACAAAGTGTATATTTTGGA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGCCACACCAATATTTaGCATGAGGTAGTATTCAGC +
Preference number: 3 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESHTNI*HEVVFS
Trigger: GCTGAATACTACCTCATGCAAAATATTGGTGTGGCT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 3 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTGAGAACAAAGTATTaGGATAGGGAAGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLRTKY*DREEGW
Trigger: CCATCCTTCTTCCCTATCCAAATACTTTGTTCTCAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTA +
Preference number: 3 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSYLSGE*PKQLSL
Trigger: TAATGATAACTGCTTTGGCAATTCCCCAGACAGGTA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp TTCCTATTTGAAATTAATTCACTTTTGCACAACAAGTaGCCCACAAGCCAATTCCAGCGGCACAAGAAAACG +
Preference number: 3 (lower is better)
Translates to: FLFEINSLLHNK*PTSQFQRHKKT
Trigger: CGTTTTCTTGTGCCGCTGGAATTGGCTTGTGGGTCACTTGTTGTGCAAAAGTGAATTAATTTCAAATAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp CAGTCAGCATCATCAGTTTTCCCTAATGACCTACAATaGTTTCCAATCAAGATCAGGTGTTTGTGGGTTATT +
Preference number: 3 (lower is better)
Translates to: QSASSVFPNDLQ*FPIKIRCLWVI
Trigger: AATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGGGAAAACTGATGATGCTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCTATATGCATGGTGTaGCTCATTCATTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSICMV*LIHLLS
Trigger: AGACAGCAAATGAATGAGCAACACCATGCATATAGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTACAGCAAAAAGAGTaGGCTAAATCGAAAGGATTT +
Preference number: 3 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLQQKE*AKSKGF
Trigger: AAATCCTTTCGATTTAGCCAACTCTTTTTGCTGTAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACCTTAGGTGCAATTTaGGATGAAGAAGTATACCTG +
Preference number: 3 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTLGAI*DEEVYL
Trigger: CAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGTCAGCAGATACAATTaGACTCATGAAATGACATCC +
Preference number: 3 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLVSRYN*THEMTS
Trigger: GGATGTCATTTCATGAGTCAAATTGTATCTGCTGAC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CCA 72 bp AACGTGAGTATTCTCCAAGTACTCAATCTATATGCATaGTGTTGCTCATTCATTTGCTGTCTCAGTTGTTTG +
Preference number: 3 (lower is better)
Translates to: NVSILQVLNLYA*CCSFICCLSCL
Trigger: CAAACAACTGAGACAGCAAATGAATGAGCAACACCATGCATATAGATTGAGTACTTGGAGAATACTCACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTGAGAACAAAGTATTaGGATAGGGAAGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELRTKY*DREEGW
Trigger: CCATCCTTCTTCCCTATCCAAATACTTTGTTCTCAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCCCCAAACATCCCCTTaGAATATTACTTTGTTACAT +
Preference number: 3 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSPQTSP*NITLLH
Trigger: ATGTAACAAAGTAATATTCAAAGGGGATGTTTGGGG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR GCA 72 bp AGTATTCTCCAAGTACTCAATCTATATGCATGGTGTTaGTCATTCATTTGCTGTCTCAGTTGTTTGCACTTT +
Preference number: 3 (lower is better)
Translates to: SILQVLNLYAWC*SFICCLSCLHF
Trigger: AAAGTGCAAACAACTGAGACAGCAAATGAATGAGCAACACCATGCATATAGATTGAGTACTTGGAGAATACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATCTATATGCATGGTGTaGCTCATTCATTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESICMV*LIHLLS
Trigger: AGACAGCAAATGAATGAGCAACACCATGCATATAGA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAATCAAGATGATACTCTaGAGTGGTTCCAATTTTCAG +
Preference number: 3 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEIKMIL*SGSNFQ
Trigger: CTGAAAATTGGAACCACTCAAGAGTATCATCTTGAT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR TCA 72 bp AAAACTATTAGTCATAAAAAGATGAGTTCAAGTGTCTaGGTGTCTCCGTTTAGAAGGCACAGTAATTGGATT +
Preference number: 3 (lower is better)
Translates to: KTISHKKMSSSV*VSPFRRHSNWI
Trigger: AATCCAATTACTGTGCCTTCTAAACGGAGACACTCAGACACTTGAACTCATCTTTTTATGACTAATAGTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTTCCCGGAGAGGCGCTaGCCGCGCTGCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPFPERR*PRCVGL
Trigger: GAGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGCGGGGCCGCCGCCGTaGGTACCGGGTGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPAGPPP*VPGASL
Trigger: AAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCCAGCGGGATGCGCGTaGCAGGGCTGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFPAGCA*QGWLPP
Trigger: CGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACGCTGTCCAGCGGGATaGGCGTGCCAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLRCPAG*ACQGWL
Trigger: CAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACACCACGCGAAAGGCTaGAGCCTGCCGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHHAKG*SLPGVQ
Trigger: CTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTGTGCGGGTCGATCTaGAAGAGCTCGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLCGSI*KSSRVR
Trigger: CCGCACGCGCGAGCTCTTTCAGATCGACCCGCACAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCAGCGGGATGCGCGTaGCAGGGCTGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPAGCA*QGWLPP
Trigger: CGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGCTGTCCAGCGGGATaGGCGTGCCAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRCPAG*ACQGWL
Trigger: CAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGGTGCACGGGAGCTGTaGTGCCGTCTGTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEGAREL*CRLCPL
Trigger: GAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGGCGCTGGCCGCGCTaGGTTGGGCTCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRRWPR*VGLPSS
Trigger: GGAGGAAGGGAGCCCAACGCAGCGCGGCCAGCGCCT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTGCGCGTGCCAGGGCTaGCTGCCTCCGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPCACQG*LPPRSP
Trigger: TGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTCCAGCTCGATCTGTaGTGCCGGGAAACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLQLDL*CRETGR
Trigger: GCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACGTGCCAGGGCTGGCTaGCTCCGAGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGERARAG*LRDLQL
Trigger: GAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCAGCGGGATGCGCGTaGCAGGGCTGGCTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPAGCA*QGWLPP
Trigger: CGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACCACCTGGCCGTTGGTaGCCTCGTCTGGATCGCTGG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEPPGRW*PRLDRW
Trigger: CCAGCGATCCAGACGAGGGCACCAACGGCCAGGTGG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGCCGCTACTGCTGCTaGTGCTCCTCCGGATGCCGC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRRYCC*CSSGCR
Trigger: GCGGCATCCGGAGGAGCAGCAGCAGCAGTAGCGGCG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCGTCTTTGGCCACGTTaGCAATCACCGTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPRLWPR*QSPSRR
Trigger: GCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATGGCACTCTGCAGCATaGGCACGCCGCCGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKWHSAA*ARRRRV
Trigger: CACGCGACGGCGGCGTGCCCATGCTGCAGAGTGCCA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTGGCACTCTGCAGCATaGGCACGCCGCCGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFWHSAA*ARRRRV
Trigger: CACGCGACGGCGGCGTGCCCATGCTGCAGAGTGCCA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTCCAGATCACGGGCTaGGGGAGCCAGGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLQITG*GSQGNG
Trigger: ACCATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTGGCCGCGCTGCGTTaGGCTCCCTTCCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLAALR*APFLPG
Trigger: GCCCGGGAGGAAGGGAGCCCAACGCAGCGCGGCCAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACGGGAGTCAGTTACTaGCAAGCGCCGCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTGVSY*QAPRAP
Trigger: GGGTGCCCGCGGCGCTTGCCAGTAACTGACTCCCGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCACCACGCGAAAGGCTaGAGCCTGCCGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHHAKG*SLPGVQ
Trigger: CTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACGTCGCCGCGCGTCTTaGTCTCCAGGCCGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRRRAS*SPGRTA
Trigger: AGCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCGGCGGCTCCAATGCTaGGGTTGCGGCGGACGCGGC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYRRLQC*GCGGRG
Trigger: GCCGCGTCCGCCGCAACCTCAGCATTGGAGCCGCCG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCGTGCCAGGGCTGGCTaGCTCCGAGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRARAG*LRDLQL
Trigger: GAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACGTGCCAGGGCTGGCTaGCTCCGAGATCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRARAG*LRDLQL
Trigger: GAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCCACCTGGCCGTTGGTaGCCTCGTCTGGATCGCTGG +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYPPGRW*PRLDRW
Trigger: CCAGCGATCCAGACGAGGGCACCAACGGCCAGGTGG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGCAAGCCAGGCATGGTaGACGGGAGCTGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKASQAW*TGAVLP
Trigger: CGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGCTCAGCCGGAATGCTaGGGAGCGCAACGCGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKAQPEC*GAQRAK
Trigger: CTTGGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGCTGCACGGGGCTCTaGCTGGCCTCGCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGCTGL*LASPLH
Trigger: GTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCTCTCGCGCGTCTTTaGCCACGTTGGCAATCACCG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPLARL*PRWQSP
Trigger: CGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGGGCAAGCCAGGCATaGTGCACGGGAGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRASQA*CTGAVL
Trigger: CAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCGTCGCCGCGCGTCTTaGTCTCCAGGCCGAACAGCT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRRRAS*SPGRTA
Trigger: AGCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTGTGCGGGTCGATCTaGAAGAGCTCGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLCGSI*KSSRVR
Trigger: CCGCACGCGCGAGCTCTTTCAGATCGACCCGCACAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGCGTTGCTTTGCAGTaGGGGAAGGCCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSVALQ*GKAAVL
Trigger: AAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCGGTCATGTCGTAGGTaGCTCGGCCATTTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPRSCRR*LGHFRP
Trigger: AGGGCGAAAATGGCCGAGTCACCTACGACATGACCG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCAGCCGGGTGGTCGCTaGCATCTTTCCCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPQPGGR*HLSQRL
Trigger: CAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTAGCCTTCCTCAGCTaGACGCCAGCCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELAFLS*TPASAS
Trigger: ACTGGCACTGGCTGGCGTTCAGCTGAGGAAGGCTAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGCGGTGCACCGGCACTaGGGCTGGCGAACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEAVHRH*GWRTRC
Trigger: ACAGCGAGTTCGCCAGCCTCAGTGCCGGTGCACCGC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCGAAAGGCTGAAGCCTaGCGGGGGTCCAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRKAEA*RGSSAK
Trigger: CTTCGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTCCAGCTCGATCTGTaGTGCCGGGAAACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLQLDL*CRETGR
Trigger: GCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATTGTATTGGTCGTGCTaGTCGCGGTCCAGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELYWSC*SRSSRP
Trigger: CGGACGGCTGGACCGCGAGCAGCACGACCAATACAA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTGTGCTGCCGTCTGTaGCCGCTCGTCCGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLCCRL*PLVRLR
Trigger: GCGGAGACGGACGAGCGGGCACAGACGGCAGCACAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGCACGGGAGCTGTGCTaGCGTCTGTGCCCGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLARELC*RLCPLV
Trigger: GACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATCGCTCAGCCGGAATaGTGCGGAGCGCAACGCGCC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSIAQPE*CGAQRA
Trigger: GGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGCGAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAGCCTTTCAGGCACTaGCCGGCCCGCCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYQPFRH*PARRGA
Trigger: TGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGTCTTTGGCCACGTTaGCAATCACCGTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRLWPR*QSPSRR
Trigger: GCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTGCGCGTGCCAGGGCTaGCTGCCTCCGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSCACQG*LPPRSP
Trigger: TGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTGGCACTCTGCAGCATaGGCACGCCGCCGTCGCGTG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEWHSAA*ARRRRV
Trigger: CACGCGACGGCGGCGTGCCCATGCTGCAGAGTGCCA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTCTCCTCAGCCGGGTaGTCGCTGACATCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLSSAG*SLTSFP
Trigger: TGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAGCCAGTGGCCTCTCTaGCTCAACAGCCACGTGACA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSQWPL*LNSHVT
Trigger: TGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCACGCCAAAGCTTCCTaGGTCTGGATCGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPHAKAS*VWIVSA
Trigger: AGCGCTTACGATCCAGACTCAGGAAGCTTTGGCGTG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAACAGCTCGTTGGGCGTaGGCTCGTAAGTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKTARWA*ARKSAR
Trigger: GCGTGCAGACTTACGAGCTCACGCCCAACGAGCTGT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGCGCGTGCGGTCGTTaGCGTAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRACGR*RSHRRS
Trigger: ACTCCTTCTATGGCTACGTCAACGACCGCACGCGCG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGCGTTGCTTTGCAGTaGGGGAAGGCCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYSVALQ*GKAAVL
Trigger: AAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACGGTCATGTCGTAGGTaGCTCGGCCATTTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLRSCRR*LGHFRP
Trigger: AGGGCGAAAATGGCCGAGTCACCTACGACATGACCG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGTCTTGCCGTGGTCGTaGGCCACCACGATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEVLPWS*ATTISS
Trigger: TGAGCTTATCGTGGTGGCTCACGACCACGGCAAGAC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGTCTTGCCGTGGTCGTaGGCCACCACGATAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLVLPWS*ATTISS
Trigger: TGAGCTTATCGTGGTGGCTCACGACCACGGCAAGAC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGAGGCTGCCAGAGCTTaGGCGCGCTCCCTCGCGCTA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYEAARA*ARSLAL
Trigger: TAGCGCGAGGGAGCGCGCTCAAGCTCTGGCAGCCTC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACAGCTCGATCTGTGCTaGCGGGAAACTGGGCGCATT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLQLDLC*RETGRI
Trigger: AATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCTCCAGCTCGATCTGTaGTGCCGGGAAACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLQLDL*CRETGR
Trigger: GCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACGCTGTCCAGCGGGATaGGCGTGCCAGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERCPAG*ACQGWL
Trigger: CAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCACCTGGCCGTTGGTaGCCTCGTCTGGATCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPPGRW*PRLDRW
Trigger: CCAGCGATCCAGACGAGGGCACCAACGGCCAGGTGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTTGTATTGGTCGTGCTaGTCGCGGTCCAGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLYWSC*SRSSRP
Trigger: CGGACGGCTGGACCGCGAGCAGCACGACCAATACAA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAAGGACTTGGCACTCTaGAGCATGGGCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSKDLAL*SMGTPP
Trigger: CGGCGGCGTGCCCATGCTGCAGAGTGCCAAGTCCTT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATACCGTAGCGTTGCTTTaGAGTGAGGGAAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYTVALL*SEGRPP
Trigger: CGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACCACATTCAGGAAAGTaGTCTCAGAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEPHSGK*SQSGGS
Trigger: GCTGCCGCCGCTCTGAGAGCACTTTCCTGAATGTGG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCGCTACTGCTGCTGCTaGTCCTCCGGATGCCGCAAA +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRYCCC*SSGCRK
Trigger: TTTGCGGCATCCGGAGGAGCAGCAGCAGCAGTAGCG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGAGCAGTTGAGGGTCTaGGGGCGTTTTCGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPEQLRV*GRFRLG
Trigger: TCCTAGACGAAAACGCCCGCAGACCCTCAACTGCTC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGTACCCGCTTGGAATaGGCCCTCCGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESTRLE*ALRGLG
Trigger: CCCCAGACCCCGGAGGGCGCATTCCAAGCGGGTACT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCGTCTTTGGCCACGTTaGCAATCACCGTCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRLWPR*QSPSRR
Trigger: GCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATGCACTTGGGGCTCTaGCGGCACAGCAGATCACGG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKMHLGL*RHSRSR
Trigger: CCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGGGAGGCGAGTTTTCTaGCACGCTCACCGCGTAGGT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYGRRVF*HAHRVG
Trigger: ACCTACGCGGTGAGCGTGCCAGAAAACTCGCCTCCC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGCTCATAGGAGGACTTaGAGCTCTCCCCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEAHRRT*SSPRRC
Trigger: GCACCTTCGGGGAGAGCTCCAAGTCCTCCTATGAGC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAATCAGGTCAGGCTGCTaGGGCCCCTGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEIRSGC*GPWLLK
Trigger: TTTCAACAGCCAGGGGCCCCAGCAGCCTGACCTGAT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACATGCTCAGGGGACTTaGAACGGATGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHAQGT*NGWAWG
Trigger: ACCCCATGCCCATCCGTTCCAAGTCCCCTGAGCATG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCTTGGGGCTGCAGATaGTCACATCGACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPWGCR*SHRQSS
Trigger: AGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTCCAGATCACGGGCTaGGGGAGCCAGGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLQITG*GSQGNG
Trigger: ACCATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCTCTCCGTTTGGGCTaGGGTGTCGCTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSLRLG*GVAPRS
Trigger: GGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTCTCTTCTCTCCGTTTaGGCTGGGGTGTCGCTCCAA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSLLSV*AGVSLQ
Trigger: TTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCGCTGTCTGTGCACCTaGCATGCGCAAAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRCLCT*HAQRPP
Trigger: GGGAGGTCTTTGCGCATGCCAGGTGCACAGACAGCG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGCACGGGGCTCTGCCTaGCCTCGCCTCTCCACACCC +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEARGSA*PRLSTP
Trigger: GGGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGCAGGAGCGACTCCATaGCTGCACGGGGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEAGATP*LHGALP
Trigger: AGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
3UTR CAA 72 bp CTATCCCCTTCACCCTGCCTCTCCCTAAACTGCCCTTaGTCCTTGCTGCTTCAAGTGGACCACTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSPSPCLSLNCP*SLLLQVDHFLF
Trigger: AAACAAAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACACCACGCGAAAGGCTaGAGCCTGCCGGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEHHAKG*SLPGVQ
Trigger: CTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCAATCTTCTGCTTGGTaGCCAGCAGGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFQSSAW*PAGQSW
Trigger: CCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACAATCTTCTGCTTGGTaGCCAGCAGGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKQSSAW*PAGQSW
Trigger: CCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCGTCGCCGCGCGTCTTaGTCTCCAGGCCGAACAGCT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYRRRAS*SPGRTA
Trigger: AGCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAAGCTCACTGTTGACTaGCAGCAGGTTGATGACCGG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPKLTVD*QQVDDR
Trigger: CCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCTT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCGCGTGCCTGAATTGTaGGGTTGTATTGGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPRVPEL*GCIGRA
Trigger: AGCACGACCAATACAACCTCACAATTCAGGCACGCG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTGTTCTCCTGCACAATaGCCTGGTAGTAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPCSPAQ*PGSRAW
Trigger: CCAAGCCCTACTACCAGGTCATTGTGCAGGAGAACA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGTTCACAGAGCCCATTaGCTCTTGGGCATCGAGAGC +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLVHRAH*LLGIES
Trigger: GCTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAAC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGTTCACAGAGCCCATTaGCTCTTGGGCATCGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEVHRAH*LLGIES
Trigger: GCTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAAC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCAGCCGGGTGGTCGCTaGCATCTTTCCCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYQPGGR*HLSQRL
Trigger: CAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACCCCTGCTGCCTGTTaGAACAAGGGACTGTCACAG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTPAAC*NKGLSQ
Trigger: CTGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTGTGAGTGTGGAGTATaGGCAAGCAGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPCECGV*ASRRQW
Trigger: CCATTGCCTCCTGCTTGCTCATACTCCACACTCACA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTACCGTCCCGGCGCGCTaGTCCTCTTCTACCGAGTAC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSTVPAR*SSSTEY
Trigger: GTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCGAAAGGCTGAAGCCTaGCGGGGGTCCAGCGCGAAG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYRKAEA*RGSSAK
Trigger: CTTCGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCACGCCGCCGTCGCGTaGCTGAATTGTGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYHAAVA*LNCEVV
Trigger: TACAACCTCACAATTCAGGCACGCGACGGCGGCGTG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAGCCTATGCCAGAGTTaGGGGGTATGTAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGESLCQS*GVCRPR
Trigger: CCGAGGTCTACATACCCCGCAACTCTGGCATAGGCT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTCACCAGGTAGCCTATaGCAGAGTTGCGGGGTATGT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSPGSL*QSCGVC
Trigger: ACATACCCCGCAACTCTGGCATAGGCTACCTGGTGA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACCACATTCAGGAAAGTaGTCTCAGAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKPHSGK*SQSGGS
Trigger: GCTGCCGCCGCTCTGAGAGCACTTTCCTGAATGTGG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCATAATCAGGTCAGGCTaGTGGGGCCCCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFIIRSG*WGPWLL
Trigger: CAACAGCCAGGGGCCCCAGCAGCCTGACCTGATTAT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACTCACAGCCATTGCCTaGCTCCCGGATAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLTAIA*LPDNAV
Trigger: AACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELSPSP*LSLNCP
Trigger: AGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGCCGTGGGTACCGGGTaGTTCTCTTCTCTCCGTTTG +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYAVGTG*FSSLRL
Trigger: CAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCTGCGTCCACAGTATaGCCAGCAGCAGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPASTV*PAAAAP
Trigger: CGGTGCTGCTGCTGCTGGCCATACTGTGGACGCAGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCTGCGTCCACAGTATaGCCAGCAGCAGCAGCACCG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPASTV*PAAAAP
Trigger: CGGTGCTGCTGCTGCTGGCCATACTGTGGACGCAGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGTGTGGAGCCGAGTTaGACACCACGCGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGVEPS*TPRERL
Trigger: CAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATGCACTTGGGGCTCTaGCGGCACAGCAGATCACGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSMHLGL*RHSRSR
Trigger: CCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGGAGGCGAGTTTTCTaGCACGCTCACCGCGTAGGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGRRVF*HAHRVG
Trigger: ACCTACGCGGTGAGCGTGCCAGAAAACTCGCCTCCC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTGCAGTGTGCCGGGATaGAATTGGGCCCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYCSVPG*NWAPSP
Trigger: AGGACTTGGGGCCCAATTCCATCCCGGCACACTGCA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTGCAGTGTGCCGGGATaGAATTGGGCCCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFCSVPG*NWAPSP
Trigger: AGGACTTGGGGCCCAATTCCATCCCGGCACACTGCA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGCTCATAGGAGGACTTaGAGCTCTCCCCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFAHRRT*SSPRRC
Trigger: GCACCTTCGGGGAGAGCTCCAAGTCCTCCTATGAGC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGAGCCCATTGACTCTTaGGCATCGAGAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFEPIDS*ASRAGD
Trigger: GTCCCCTGCTCTCGATGCCCAAGAGTCAATGGGCTC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATCAGGTCAGGCTGCTaGGGCCCCTGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKIRSGC*GPWLLK
Trigger: TTTCAACAGCCAGGGGCCCCAGCAGCCTGACCTGAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGGGACTTGGAACGGATaGGCATGGGGTTCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLGTWNG*AWGSGA
Trigger: TGCCCCGGAACCCCATGCCCATCCGTTCCAAGTCCC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGGACTTGGAACGGATaGGCATGGGGTTCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGTWNG*AWGSGA
Trigger: TGCCCCGGAACCCCATGCCCATCCGTTCCAAGTCCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACGAAAGTCCGTTTGGTaGGGCCGCAGTCGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGERKSVW*GRSRHK
Trigger: CTTATGACGACTGCGGCCCCACCAAACGGACTTTCG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTATTGCGAAAGTCCGTTTaGTGGGGCCGCAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLRKSV*WGRSRH
Trigger: ATGACGACTGCGGCCCCACCAAACGGACTTTCGCAA...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGCCAGTGGCCTCTCTaGCTCAACAGCCACGTGACA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSQWPL*LNSHVT
Trigger: TGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTGGCTTCGAAGGGCTTaGGGGCGCGTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSWLRRA*GRVCPG
Trigger: TCCTGGACAGACGCGCCCCCAAGCCCTTCGAAGCCA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGAGAGAGTACCCGCTTaGAATGCGCCCTCCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLERVPA*NAPSGV
Trigger: GACCCCGGAGGGCGCATTCCAAGCGGGTACTCTCTC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAACAGCTCGTTGGGCGTaGGCTCGTAAGTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELTARWA*ARKSAR
Trigger: GCGTGCAGACTTACGAGCTCACGCCCAACGAGCTGT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCACCGTCTAGCGCAGTaGTTCGGAAGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHRLAQ*FGSCSA
Trigger: CGCACTACAGCTTCCGAATCACTGCGCTAGACGGTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCGCGCGTGCGGTCGTTaGCGTAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQERACGR*RSHRRS
Trigger: ACTCCTTCTATGGCTACGTCAACGACCGCACGCGCG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTGTGCGGGTCGATCTaGAAGAGCTCGCGCGTGCGG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELCGSI*KSSRVR
Trigger: CCGCACGCGCGAGCTCTTTCAGATCGACCCGCACAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGACGTCCATTGAGGCCTaGGTCGCGATCAGACACCCG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQETSIEA*VAIRHP
Trigger: CGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACGTCCATTGAGGCCTaGGTCGCGATCAGACACCCG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTSIEA*VAIRHP
Trigger: CGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCGCCGTCGCGTGCCTaGATTGTGAGGTTGTATTGG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPPSRA*IVRLYW
Trigger: CCAATACAACCTCACAATTCAGGCACGCGACGGCGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCCGCCGTCGCGTGCCTaGATTGTGAGGTTGTATTGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSPPSRA*IVRLYW
Trigger: CCAATACAACCTCACAATTCAGGCACGCGACGGCGG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCCTTGGCCAGCACCTTaGATTCGAACGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFPWPAP*IRTPWS
Trigger: AGACCAAGGCGTTCGAATTCAAGGTGCTGGCCAAGG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGGTAGTCAAAATAGTTaGGGGAGGAGGTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPGSQNS*GRRSGK
Trigger: CTTCCCTGACCTCCTCCCTCAACTATTTTGACTACC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGGGGCCCCTGGCTGTTaGAAGAGTGATGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFGAPGC*KSDGRC
Trigger: ACATCTACCATCACTCTTTCAACAGCCAGGGGCCCC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTAGCCTTCCTCAGCTaGACGCCAGCCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLAFLS*TPASAS
Trigger: ACTGGCACTGGCTGGCGTTCAGCTGAGGAAGGCTAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTTGCAGGAGCGTCTTaGTTTCATCTTCCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELAGAS*FHLPGE
Trigger: CTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATGGAGGACGCACCGCTaGGTCCGGACAGTACTTGAG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELWRTHR*VRTVLE
Trigger: CTCAAGTACTGTCCGGACTCAGCGGTGCGTCCTCCA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCAGCTCGATCTGTGCTaGCGGGAAACTGGGCGCATT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHQLDLC*RETGRI
Trigger: AATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGGTGACCTTGCAGTGTaGCGGGATGGAATTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSGDLAV*RDGIGP
Trigger: GGGCCCAATTCCATCCCGGCACACTGCAAGGTCACC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGGTGACCTTGCAGTGTaGCGGGATGGAATTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLGDLAV*RDGIGP
Trigger: GGGCCCAATTCCATCCCGGCACACTGCAAGGTCACC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGTCGAAAGGGCACATTaGCCAGCAAACGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKVERAH*PANGTA
Trigger: TGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGAC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGTCGAAAGGGCACATTaGCCAGCAAACGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFVERAH*PANGTA
Trigger: TGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGAC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGGTTGTATTGGTCGTaGTGCTCGCGGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRLYWS*CSRSSR
Trigger: ACGGCTGGACCGCGAGCAGCACGACCAATACAACCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCACGCCGCCGTCGCGTaGCTGAATTGTGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHAAVA*LNCEVV
Trigger: TACAACCTCACAATTCAGGCACGCGACGGCGGCGTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAAGGACTTGGCACTCTaGAGCATGGGCACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYKDLAL*SMGTPP
Trigger: CGGCGGCGTGCCCATGCTGCAGAGTGCCAAGTCCTT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAACCGTAGCGTTGCTTTaGAGTGAGGGAAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELTVALL*SEGRPP
Trigger: CGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTCCGCTGGACATCATaGTCACTGTCAGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLRWTS*SLSVWS
Trigger: TGACCAAACTGACAGTGAGCATGATGTCCAGCGGAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCTCACAGCCATTGCCTaGCTCCCGGATAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLTAIA*LPDNAV
Trigger: AACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTACTGAACACCCCTGCTaGCTGTTGAAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPTEHPC*LLKQGT
Trigger: AGTCCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACCAACTGAACACCCCTaGTGCCTGTTGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLPTEHP*CLLKQG
Trigger: CCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGTTGG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTTTTCCACTCTGGATaGCCAATCGAGCTATCCCCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLFHSG*PIELSP
Trigger: AGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGTCCGCCTCAGCAGCTaGCACAGTCGACGATTTTGT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFVRLSS*HSRRFC
Trigger: ACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGAC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGCGCTCCCAGTTCACTaGGGAGAGAGTACCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEALPVH*GESTRL
Trigger: CAAGCGGGTACTCTCTCCGCAGTGAACTGGGAGCGC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCGAACTCGCTGTCTGTaGACCTGGCATGCGCAAAGA +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRTRCL*TWHAQR
Trigger: TCTTTGCGCATGCCAGGTGCACAGACAGCGAGTTCG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGGTGTGGAGCCGAGTTaGACACCACGCGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLGVEPS*TPRERL
Trigger: CAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATGCGCGTGCCAGGGCTaGCTGCCTCCGAGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHECACQG*LPPRSP
Trigger: TGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAATTGTGAGGTTGTATTaGTCGTGCTGCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEIVRLY*SCCSRS
Trigger: GGACCGCGAGCAGCACGACCAATACAACCTCACAAT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATCAGGTCAGGCTGCTaGGGCCCCTGGCTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSIRSGC*GPWLLK
Trigger: TTTCAACAGCCAGGGGCCCCAGCAGCCTGACCTGAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCATGCTCAGGGGACTTaGAACGGATGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSHAQGT*NGWAWG
Trigger: ACCCCATGCCCATCCGTTCCAAGTCCCCTGAGCATG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCATGCTCAGGGGACTTaGAACGGATGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHAQGT*NGWAWG
Trigger: ACCCCATGCCCATCCGTTCCAAGTCCCCTGAGCATG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCGAAAGTCCGTTTGGTaGGGCCGCAGTCGTCATAAG +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRKSVW*GRSRHK
Trigger: CTTATGACGACTGCGGCCCCACCAAACGGACTTTCG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCCCAGAAAGTGGATTaGAATTCCAGCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPQKVD*NSSQNC
Trigger: GCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGGCCAGAGCTGGGATTaGTGTCCACTAGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSGQSWD*CPLGVE
Trigger: CTCCACACCTAGTGGACATCAATCCCAGCTCTGGCC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGGCCAGAGCTGGGATTaGTGTCCACTAGGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLGQSWD*CPLGVE
Trigger: CTCCACACCTAGTGGACATCAATCCCAGCTCTGGCC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCAATCTTCTGCTTGGTaGCCAGCAGGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSQSSAW*PAGQSW
Trigger: CCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCACGCCAAAGCTTCCTaGGTCTGGATCGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHAKAS*VWIVSA
Trigger: AGCGCTTACGATCCAGACTCAGGAAGCTTTGGCGTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACAGCTCGTTGGGCGTaGGCTCGTAAGTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTARWA*ARKSAR
Trigger: GCGTGCAGACTTACGAGCTCACGCCCAACGAGCTGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACACCGTCTAGCGCAGTaGTTCGGAAGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELHRLAQ*FGSCSA
Trigger: CGCACTACAGCTTCCGAATCACTGCGCTAGACGGTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCACCGTCTAGCGCAGTaGTTCGGAAGCTGTAGTGCG +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSHRLAQ*FGSCSA
Trigger: CGCACTACAGCTTCCGAATCACTGCGCTAGACGGTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAACTGCACACGTCCATTaGGGCCTGAGTCGCGATCAG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELTAHVH*GLSRDQ
Trigger: CTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGCGTTGCTTTGCAGTaGGGGAAGGCCGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSVALQ*GKAAVL
Trigger: AAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGTTCACAGAGCCCATTaGCTCTTGGGCATCGAGAGC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSVHRAH*LLGIES
Trigger: GCTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAAC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTCAGGGAAGAGCAACTaGCAACGTTCATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSGKSN*QRSSCL
Trigger: CAGACAAGATGAACGTTGTCAGTTGCTCTTCCCTGA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGGGCCCCTGGCTGTTaGAAGAGTGATGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGAPGC*KSDGRC
Trigger: ACATCTACCATCACTCTTTCAACAGCCAGGGGCCCC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCAGCCGGGTGGTCGCTaGCATCTTTCCCAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEQPGGR*HLSQRL
Trigger: CAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTAGCCTTCCTCAGCTaGACGCCAGCCAGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLAFLS*TPASAS
Trigger: ACTGGCACTGGCTGGCGTTCAGCTGAGGAAGGCTAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACCGTCCCGGCGCGCTaGTCCTCTTCTACCGAGTAC +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETVPAR*SSSTEY
Trigger: GTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACAGCTCGATCTGTGCTaGCGGGAAACTGGGCGCATT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELQLDLC*RETGRI
Trigger: AATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACCCAGCAAACGGCACTaGACACGTCCATTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELPSKRH*TRPLRP
Trigger: AGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCCAGCAAACGGCACTaGACACGTCCATTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPSKRH*TRPLRP
Trigger: AGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTTGTATTGGTCGTGCTaGTCGCGGTCCAGCCGTCCG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLYWSC*SRSSRP
Trigger: CGGACGGCTGGACCGCGAGCAGCACGACCAATACAA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAGGTTGTATTGGTCGTaGTGCTCGCGGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSRLYWS*CSRSSR
Trigger: ACGGCTGGACCGCGAGCAGCACGACCAATACAACCT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACACGCCGCCGTCGCGTaGCTGAATTGTGAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELHAAVA*LNCEVV
Trigger: TACAACCTCACAATTCAGGCACGCGACGGCGGCGTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCGAACGCCTTGGTCTaGTCGTGGTTAAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSNALV*SWLKDR
Trigger: GCGATCCTTTAACCACGAGCAGACCAAGGCGTTCGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACCGTAGCGTTGCTTTaGAGTGAGGGAAGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTVALL*SEGRPP
Trigger: CGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGCCTATGCCAGAGTTaGGGGGTATGTAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSLCQS*GVCRPR
Trigger: CCGAGGTCTACATACCCCGCAACTCTGGCATAGGCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCACCAGGTAGCCTATaGCAGAGTTGCGGGGTATGT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSPGSL*QSCGVC
Trigger: ACATACCCCGCAACTCTGGCATAGGCTACCTGGTGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCAGAGAGAGATGTCTTaGCGTGGTCGTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSQREMS*RGREPP
Trigger: TGGTGGCTCACGACCACGGCAAGACATCTCTCTCTG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAATAATCAGGTCAGGCTaGTGGGGCCCCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELIIRSG*WGPWLL
Trigger: CAACAGCCAGGGGCCCCAGCAGCCTGACCTGATTAT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACATTGTTGACATACTaGTCCAGATCACGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTLLTY*SRSRAG
Trigger: CCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACAGGGGACTCTTTGTTaGGACCTTCCTTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLQGTLC*DLPSEW
Trigger: CCATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACTGCCCTTTGTCCTTaGTGCTTCAAGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTALCP*CFKWTT
Trigger: AGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCTCTCGCGCGTCTTTaGCCACGTTGGCAATCACCG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPLARL*PRWQSP
Trigger: CGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGTGCTGCCGGGAAACTaGGCGCATTGTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLVLPGN*AHCRSG
Trigger: ACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCAC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGGGAGGCGAGTTTTCTaGCACGCTCACCGCGTAGGT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYGRRVF*HAHRVG
Trigger: ACCTACGCGGTGAGCGTGCCAGAAAACTCGCCTCCC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATGCAGTGTGCCGGGATaGAATTGGGCCCCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELCSVPG*NWAPSP
Trigger: AGGACTTGGGGCCCAATTCCATCCCGGCACACTGCA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCATTGTGAGGTTGTATTaGTCGTGCTGCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFIVRLY*SCCSRS
Trigger: GGACCGCGAGCAGCACGACCAATACAACCTCACAAT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGCTCATAGGAGGACTTaGAGCTCTCCCCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLAHRRT*SSPRRC
Trigger: GCACCTTCGGGGAGAGCTCCAAGTCCTCCTATGAGC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGAGCCCATTGACTCTTaGGCATCGAGAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELEPIDS*ASRAGD
Trigger: GTCCCCTGCTCTCGATGCCCAAGAGTCAATGGGCTC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTCTCCTCAGCCGGGTaGTCGCTGACATCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLSSAG*SLTSFP
Trigger: TGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTCTCCTCAGCCGGGTaGTCGCTGACATCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELSSAG*SLTSFP
Trigger: TGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCTTGGGGCTGCAGATaGTCACATCGACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPWGCR*SHRQSS
Trigger: AGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGGGGAGCCAGGGCAATaGTGTAAGACACGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELGEPGQ*CKTRKA
Trigger: AGCCTTCCGTGTCTTACACCATTGCCCTGGCTCCCC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTCCAGATCACGGGCTaGGGGAGCCAGGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELQITG*GSQGNG
Trigger: ACCATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATCAGTTGCACGTCGCTaGGGTCCGCCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESVARR*GPPQQL
Trigger: CAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCACGCAGATTTCCATTaGGCTGGACATGACCTCGAG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHHADFH*AGHDLE
Trigger: CTCGAGGTCATGTCCAGCTCAATGGAAATCTGCGTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATGTCGTTCAGGTCCTTaGTCTCCACCTTTATCACGC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKCRSGP*SPPLSR
Trigger: GCGTGATAAAGGTGGAGATCAAGGACCTGAACGACA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACACGCCAAAGCTTCCTaGGTCTGGATCGTAAGCGCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELHAKAS*VWIVSA
Trigger: AGCGCTTACGATCCAGACTCAGGAAGCTTTGGCGTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACGCGCGTGCGGTCGTTaGCGTAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERACGR*RSHRRS
Trigger: ACTCCTTCTATGGCTACGTCAACGACCGCACGCGCG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACGTCCATTGAGGCCTaGGTCGCGATCAGACACCCG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETSIEA*VAIRHP
Trigger: CGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCCTTGGCCAGCACCTTaGATTCGAACGCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSPWPAP*IRTPWS
Trigger: AGACCAAGGCGTTCGAATTCAAGGTGCTGGCCAAGG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCGGTCATGTCGTAGGTaGCTCGGCCATTTTCGCCCT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYRSCRR*LGHFRP
Trigger: AGGGCGAAAATGGCCGAGTCACCTACGACATGACCG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACCCCTGCTGCCTGTTaGAACAAGGGACTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTPAAC*NKGLSQ
Trigger: CTGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTAATTTGCTCCAACTaGACACCCCTGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLICSN*TPLLPV
Trigger: AACAGGCAGCAGGGGTGTTCAGTTGGAGCAAATTAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGENIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGTAACAAGGTCATCTTaGATTGCCAACACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPVTRSS*IANTAG
Trigger: TCCAGCTGTGTTGGCAATTCAAGATGACCTTGTTAC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGTGGTGTGGGGAGTGTaGGTGTGGAGTATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELVVWGV*VWSMSK
Trigger: CTTGCTCATACTCCACACTCACACTCCCCACACCAC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCCAAGTCCTTAGCCTaGACGTCCAGTTCGTACACG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPKSLA*TSSSYT
Trigger: CGTGTACGAACTGGACGTGCAGGCTAAGGACTTGGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGTCGAAAGGGCACATTaGCCAGCAAACGGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSVERAH*PANGTA
Trigger: TGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGAC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACTCATCGTAGTCTTCTaGCTTGACAACAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLIVVF*LDNSHQ
Trigger: CTGGTGACTGTTGTCAAGGCAGAAGACTACGATGAG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCAGAGAGAGATGTCTTaGCGTGGTCGTGAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEQREMS*RGREPP
Trigger: TGGTGGCTCACGACCACGGCAAGACATCTCTCTCTG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCACATTCAGGAAAGTaGTCTCAGAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPHSGK*SQSGGS
Trigger: GCTGCCGCCGCTCTGAGAGCACTTTCCTGAATGTGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATAATCAGGTCAGGCTaGTGGGGCCCCTGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYIIRSG*WGPWLL
Trigger: CAACAGCCAGGGGCCCCAGCAGCCTGACCTGATTAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATGATGTTCCTCACATaGTCAGGGGACTTGGAACGG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKMMFLT*SGDLER
Trigger: CCGTTCCAAGTCCCCTGAGCATGTGAGGAACATCAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAATCTTTCCCAAAGGTTaGGAAAGTCCGTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLIFPKG*ESPFGG
Trigger: CCCACCAAACGGACTTTCGCAACCTTTGGGAAAGAT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAACATTGTTGACATACTaGTCCAGATCACGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKTLLTY*SRSRAG
Trigger: CCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCAGGGGACTCTTTGTTaGGACCTTCCTTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFQGTLC*DLPSEW
Trigger: CCATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCACTGAACACCCCTGCTaGCTGTTGAAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFTEHPC*LLKQGT
Trigger: AGTCCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEFHNLF*SLVPTE
Trigger: CTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTATCCCCTTCACCCTaGCTCTCCCTAAACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLSPSP*LSLNCP
Trigger: AGGGCAGTTTAGGGAGAGGCAGGGTGAAGGGGATAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTTTTCCACTCTGGATaGCCAATCGAGCTATCCCCT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLFHSG*PIELSP
Trigger: AGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAAGGTCATCTTGAATTaGCAACACAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPKVILN*QHSWSN
Trigger: GTTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGGTGTGGAGCCGAGTTaGACACCACGCGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEGVEPS*TPRERL
Trigger: CAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCTGGTAGTAGGGCTTaGAAAAGTGCGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPGSRA*KSAGGC
Trigger: ACAACCACCCGCACTTTTCCAAGCCCTACTACCAGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGAGCCCATTGACTCTTaGGCATCGAGAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYEPIDS*ASRAGD
Trigger: GTCCCCTGCTCTCGATGCCCAAGAGTCAATGGGCTC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGCATCTGAGATCCCATaGAGGTCACACTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYASEIP*RSHWCS
Trigger: TGAACACCAGTGTGACCTCCATGGGATCTCAGATGC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGCATCTGAGATCCCATaGAGGTCACACTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFASEIP*RSHWCS
Trigger: TGAACACCAGTGTGACCTCCATGGGATCTCAGATGC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCGAAAGTCCGTTTGGTaGGGCCGCAGTCGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLRKSVW*GRSRHK
Trigger: CTTATGACGACTGCGGCCCCACCAAACGGACTTTCG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCGAAAGTCCGTTTaGTGGGGCCGCAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLRKSV*WGRSRH
Trigger: ATGACGACTGCGGCCCCACCAAACGGACTTTCGCAA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATTGCGAAAGTCCGTTTaGTGGGGCCGCAGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLRKSV*WGRSRH
Trigger: ATGACGACTGCGGCCCCACCAAACGGACTTTCGCAA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 72 bp CCTTCACCCTGCCTCTCCCTAAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCACTTTTTGTTTTTAATA +
Preference number: 4 (lower is better)
Translates to: PSPCLSLNCPLS*LLQVDHFLFLI
Trigger: TATTAAAAACAAAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCAGGGTGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCACGCAGATTTCCATTaGGCTGGACATGACCTCGAG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEHADFH*AGHDLE
Trigger: CTCGAGGTCATGTCCAGCTCAATGGAAATCTGCGTG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTGTCGTTCAGGTCCTTaGTCTCCACCTTTATCACGC +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHCRSGP*SPPLSR
Trigger: GCGTGATAAAGGTGGAGATCAAGGACCTGAACGACA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACGCGTGCCTGAATTGTaGGGTTGTATTGGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELRVPEL*GCIGRA
Trigger: AGCACGACCAATACAACCTCACAATTCAGGCACGCG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACCGCCGTCGCGTGCCTaGATTGTGAGGTTGTATTGG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEPPSRA*IVRLYW
Trigger: CCAATACAACCTCACAATTCAGGCACGCGACGGCGG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTGTTCTCCTGCACAATaGCCTGGTAGTAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQECSPAQ*PGSRAW
Trigger: CCAAGCCCTACTACCAGGTCATTGTGCAGGAGAACA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGGTAGTCAAAATAGTTaGGGGAGGAGGTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHGSQNS*GRRSGK
Trigger: CTTCCCTGACCTCCTCCCTCAACTATTTTGACTACC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTGTTCAGCACATCGTTaGCAGCAGTATCACAATACA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPCSAHR*QQYHNT
Trigger: TGTATTGTGATACTGCTGTCAACGATGTGCTGAACA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLNPSP*RALQSN
Trigger: ATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAATGCACTTGTGCTTCTaGGAGGACTCATACATCAGA +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEMHLCF*EDSYIR
Trigger: TCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCAT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGTCCGGACAGTACTTaGGGCGAAGGTAAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSPDST*GEGKEG
Trigger: GCCCTCTTTACCTTCGCCTCAAGTACTGTCCGGACT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAGCCGAGGAGACAAGTaGTGGTTAAACAATTACTGC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGESRGDK*WLNNYC
Trigger: GCAGTAATTGTTTAACCATCACTTGTCTCCTCGGCT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTCACGGTCAATCTTCTaGTTGGTGACCAGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESRSIF*LVTSRP
Trigger: TGGCCTGCTGGTCACCAAGCAGAAGATTGACCGTGA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAAGCTCTCATATTCCTaGAGTCGAAAGGGCACATTG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEKLSYS*SRKGTL
Trigger: CAATGTGCCCTTTCGACTGCAGGAATATGAGAGCTT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGGTTGTATTGGTCGTaGTGCTCGCGGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERLYWS*CSRSSR
Trigger: ACGGCTGGACCGCGAGCAGCACGACCAATACAACCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTCGAACGCCTTGGTCTaGTCGTGGTTAAAGGATCGC +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESNALV*SWLKDR
Trigger: GCGATCCTTTAACCACGAGCAGACCAAGGCGTTCGA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGCCTATGCCAGAGTTaGGGGGTATGTAGACCTCGG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSLCQS*GVCRPR
Trigger: CCGAGGTCTACATACCCCGCAACTCTGGCATAGGCT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCACCAGGTAGCCTATaGCAGAGTTGCGGGGTATGT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSPGSL*QSCGVC
Trigger: ACATACCCCGCAACTCTGGCATAGGCTACCTGGTGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATGATGTTCCTCACATaGTCAGGGGACTTGGAACGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSMMFLT*SGDLER
Trigger: CCGTTCCAAGTCCCCTGAGCATGTGAGGAACATCAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTACATTGTTGACATACTaGTCCAGATCACGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSTLLTY*SRSRAG
Trigger: CCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCAACTGAACACCCCTaGTGCCTGTTGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPTEHP*CLLKQG
Trigger: CCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGTTGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEKAFLV*TCASER
Trigger: CCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTTTGCAGGTACAGCCTaGCTACAAAACCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPFAGTA*LQNQFT
Trigger: TGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGATCCTTGCTCAGAATaGCTATTTGCAGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYDPCSE*LFAGTA
Trigger: GGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCAAACTTGTCAGAATaGTTTGGGGGAACATTCAAC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPNLSE*FGGTFN
Trigger: GTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGTGCTGCCGGGAAACTaGGCGCATTGTCGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEVLPGN*AHCRSG
Trigger: ACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCAC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATTGGAAAAGTGCGGGTaGTTGTCATTTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELEKCG*LSFSSV
Trigger: CACTGACGAAAATGACAACCACCCGCACTTTTCCAA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCTGGTAGTAGGGCTTaGAAAAGTGCGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPGSRA*KSAGGC
Trigger: ACAACCACCCGCACTTTTCCAAGCCCTACTACCAGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTGCTCACTGTCAGTTTaGTCACTCTCCTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFCSLSV*SLSSCP
Trigger: TGGACATGAGGAGAGTGACCAAACTGACAGTGAGCA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCAATACAGGCTCCGCTaGACATCATGCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHQYRLR*TSCSLS
Trigger: TGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCAATACAGGCTCCGCTaGACATCATGCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSQYRLR*TSCSLS
Trigger: TGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGCATCTGAGATCCCATaGAGGTCACACTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSASEIP*RSHWCS
Trigger: TGAACACCAGTGTGACCTCCATGGGATCTCAGATGC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCTTGGGGCTGCAGATaGTCACATCGACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPWGCR*SHRQSS
Trigger: AGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGGGGAGCCAGGGCAATaGTGTAAGACACGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEGEPGQ*CKTRKA
Trigger: AGCCTTCCGTGTCTTACACCATTGCCCTGGCTCCCC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCATCTTTTCTGCTCCCTaGTTCCCACTGAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFIFSAP*FPLSIA
Trigger: TGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGAT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGCCAGTGGCCTCTCTaGCTCAACAGCCACGTGACA +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESQWPL*LNSHVT
Trigger: TGTCACGTGGCTGTTGAGCCAGAGAGGCCACTGGCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAATCCTTTTCCACTCTaGATGCCCAATCGAGCTATC +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGENPFPL*MPNRAI
Trigger: GATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTGTCGTTCAGGTCCTTaGTCTCCACCTTTATCACGC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLCRSGP*SPPLSR
Trigger: GCGTGATAAAGGTGGAGATCAAGGACCTGAACGACA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAAGCTCACTGTTGACTaGCAGCAGGTTGATGACCGG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYKLTVD*QQVDDR
Trigger: CCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCTT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCGCGTGCCTGAATTGTaGGGTTGTATTGGTCGTGCT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYRVPEL*GCIGRA
Trigger: AGCACGACCAATACAACCTCACAATTCAGGCACGCG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGTAGTCAAAATAGTTaGGGGAGGAGGTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGSQNS*GRRSGK
Trigger: CTTCCCTGACCTCCTCCCTCAACTATTTTGACTACC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGGGGCCCCTGGCTGTTaGAAGAGTGATGGTAGATGT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEGAPGC*KSDGRC
Trigger: ACATCTACCATCACTCTTTCAACAGCCAGGGGCCCC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAGGTGGAGCTGCTCTTaGTTAAATGGGCTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLRWSCS*LNGLGY
Trigger: ATAGCCGAGCCCATTTAATCAAGAGCAGCTCCACCT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGGTGGAGCTGCTCTTaGTTAAATGGGCTCGGCTAT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQERWSCS*LNGLGY
Trigger: ATAGCCGAGCCCATTTAATCAAGAGCAGCTCCACCT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR TCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPRTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACCCCTGCTGCCTGTTaGAACAAGGGACTGTCACAG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETPAAC*NKGLSQ
Trigger: CTGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHNIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLNPSP*RALQSN
Trigger: ATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTCAATCCCAGCCCATaGCGTGCTTTGCAGTCTAAT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELNPSP*RALQSN
Trigger: ATTAGACTGCAAAGCACGTCATGGGCTGGGATTGAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACCGAAATCACTCCCTTaGGTTTATGTGTGCAACATG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKPKSLP*VYVCNM
Trigger: CATGTTGCACACATAAACTCAAGGGAGTGATTTCGG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCTTTTGCACAACAAGTaGCCCACAAGCCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLLHNK*PTSQFQ
Trigger: CTGGAATTGGCTTGTGGGTCACTTGTTGTGCAAAAG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGTAACAAGGTCATCTTaGATTGCCAACACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFVTRSS*IANTAG
Trigger: TCCAGCTGTGTTGGCAATTCAAGATGACCTTGTTAC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACCCAAGTCCTTAGCCTaGACGTCCAGTTCGTACACG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEPKSLA*TSSSYT
Trigger: CGTGTACGAACTGGACGTGCAGGCTAAGGACTTGGG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTCATCGTAGTCTTCTaGCTTGACAACAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLIVVF*LDNSHQ
Trigger: CTGGTGACTGTTGTCAAGGCAGAAGACTACGATGAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTCCGCTGGACATCATaGTCACTGTCAGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLRWTS*SLSVWS
Trigger: TGACCAAACTGACAGTGAGCATGATGTCCAGCGGAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTCACAGCCATTGCCTaGCTCCCGGATAACGCTGTT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELTAIA*LPDNAV
Trigger: AACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATGGGGCTGACCTCATaGATGACTTTCTCGCTATCA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSMGLTS*MTFSLS
Trigger: TGATAGCGAGAAAGTCATGCATGAGGTCAGCCCCAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCAGGGGACTCTTTGTTaGGACCTTCCTTCAGAATGG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLQGTLC*DLPSEW
Trigger: CCATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAAAACAAGAAGCTCCTaGTTCTTCACTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEKTRSS*FFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGACTGAACACCCCTGCTaGCTGTTGAAACAAGGGACT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQETEHPC*LLKQGT
Trigger: AGTCCCTTGTTTCAACAGGCAGCAGGGGTGTTCAGT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTATATGCATGGTGTTaGTCATTCATTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLYAWC*SFICCL
Trigger: GAGACAGCAAATGAATGAGCAACACCATGCATATAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFKAFLV*TCASER
Trigger: CCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTATTTGCAGGTACAGCCTaGCTACAAAACCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLFAGTA*LQNQFT
Trigger: TGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAA...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLRMPI*RYSLPT
Trigger: TGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAACTGCCCTTTGTCCTTaGTGCTTCAAGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELTALCP*CFKWTT
Trigger: AGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATGCCTCTCCCTAAACTaGCCTTTGTCCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELCLSLN*PLSLLL
Trigger: AAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTGCCTCTCCCTAAACTaGCCTTTGTCCTTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQECLSLN*PLSLLL
Trigger: AAGCAGCAAGGACAAAGGGCAGTTTAGGGAGAGGCA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTTTTCCACTCTGGATaGCCAATCGAGCTATCCCCT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLFHSG*PIELSP
Trigger: AGGGGATAGCTCGATTGGGCATCCAGAGTGGAAAAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATTGTGAGGTTGTATTaGTCGTGCTGCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYIVRLY*SCCSRS
Trigger: GGACCGCGAGCAGCACGACCAATACAACCTCACAAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTTGGAAAAGTGCGGGTaGTTGTCATTTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLEKCG*LSFSSV
Trigger: CACTGACGAAAATGACAACCACCCGCACTTTTCCAA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCTGGTAGTAGGGCTTaGAAAAGTGCGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPGSRA*KSAGGC
Trigger: ACAACCACCCGCACTTTTCCAAGCCCTACTACCAGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGTGTTGCGGGTATTCTaGTTCTCCACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKVLRVF*FSTFRK
Trigger: TTTCCTGAATGTGGAGAACCAGAATACCCGCAACAC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCAATACAGGCTCCGCTaGACATCATGCTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSQYRLR*TSCSLS
Trigger: TGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCCCCAGAAAGTGGATTaGAATTCCAGCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEPQKVD*NSSQNC
Trigger: GCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAATTGCCAACACAGCTaGAGCAACAGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKNCQHS*SNSQHH
Trigger: ATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGTGGAAACGGGGAGATaGCAATTTGTCCAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLVETGR*QFVQEN
Trigger: ATTTTCTTGGACAAATTGCCATCTCCCCGTTTCCAC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAAGCTCACTGTTGACTaGCAGCAGGTTGATGACCGG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEKLTVD*QQVDDR
Trigger: CCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCTT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTGTTCAGCACATCGTTaGCAGCAGTATCACAATACA +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYCSAHR*QQYHNT
Trigger: TGTATTGTGATACTGCTGTCAACGATGTGCTGAACA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLRTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAACATCAAGGCCCCATaGACAACTCAAGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQENIKAP*TTQAKA
Trigger: AGCTTTGGCTTGAGTTGTTCATGGGGCCTTGATGTT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGCTCAACAGCCACGTaGCAATTAATGTTCCCACTT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGSTAT*QLMFPL
Trigger: AAGTGGGAACATTAATTGTCACGTGGCTGTTGAGCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATATGCACTTGTGCTTCTaGGAGGACTCATACATCAGA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHMHLCF*EDSYIR
Trigger: TCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCAT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTTTTGCACAACAAGTaGCCCACAAGCCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLLHNK*PTSQFQ
Trigger: CTGGAATTGGCTTGTGGGTCACTTGTTGTGCAAAAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTTTTGCACAACAAGTaGCCCACAAGCCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLLHNK*PTSQFQ
Trigger: CTGGAATTGGCTTGTGGGTCACTTGTTGTGCAAAAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGAGGTATTTGTTGCTaGTTTCTAGCTCGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGGICC*FLARAS
Trigger: ACTAGCTCGAGCTAGAAATCAGCAACAAATACCTCC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAATTTCCACCCTGGTTTaGCAGGTAAACAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEISTLV*QVNSNS
Trigger: ACTATTACTGTTTACCTGTCAAACCAGGGTGGAAAT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCGCTTGCACTTGATTaGCACGAAGATCATAGTTAC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSLALD*HEDHSY
Trigger: GTAACTATGATCTTCGTGGCAATCAAGTGCAAGCGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATCGCTTGCACTTGATTaGCACGAAGATCATAGTTAC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSLALD*HEDHSY
Trigger: GTAACTATGATCTTCGTGGCAATCAAGTGCAAGCGA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTCCGCTGGACATCATaGTCACTGTCAGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLRWTS*SLSVWS
Trigger: TGACCAAACTGACAGTGAGCATGATGTCCAGCGGAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATCTTTCCCAAAGGTTaGGAAAGTCCGTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSIFPKG*ESPFGG
Trigger: CCCACCAAACGGACTTTCGCAACCTTTGGGAAAGAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGATCTTTCCCAAAGGTTaGGAAAGTCCGTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEIFPKG*ESPFGG
Trigger: CCCACCAAACGGACTTTCGCAACCTTTGGGAAAGAT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAAAACAAGAAGCTCCTaGTTCTTCACTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYKTRSS*FFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTTCCACAATCTTTTCTaGTCCCTGGTTCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEFHNLF*SLVPTE
Trigger: CTCAGTGGGAACCAGGGAGCAGAAAAGATTGTGGAA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELRMPI*RYSLPT
Trigger: TGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTCAGAATGCCTATTTaGAGGTACAGCCTGCCTACA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLRMPI*RYSLPT
Trigger: TGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGATCCTTGCTCAGAATaGCTATTTGCAGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELDPCSE*LFAGTA
Trigger: GGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGCCCTTTGTCCTTGCTaGTTCAAGTGGACCACTTTT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSALCPC*FKWTTF
Trigger: AAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACTGCCCTTTGTCCTTaGTGCTTCAAGTGGACCACT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTALCP*CFKWTT
Trigger: AGTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACCTAATGACCTACAATaGTTTCCAATCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLPNDLQ*FPIKIR
Trigger: CCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGAGACATACTGTACTTaGATCCCTCTAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLETYCT*IPLNFH
Trigger: GTGGAAATTTAGAGGGATGCAAGTACAGTATGTCTC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTTGGAAAAGTGCGGGTaGTTGTCATTTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLEKCG*LSFSSV
Trigger: CACTGACGAAAATGACAACCACCCGCACTTTTCCAA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTGCTCACTGTCAGTTTaGTCACTCTCCTCATGTCCA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLCSLSV*SLSSCP
Trigger: TGGACATGAGGAGAGTGACCAAACTGACAGTGAGCA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCTTCTTCCTGGAGACTaGTTTAGAGAACGATATCCT +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLLPGD*FRERYP
Trigger: AGGATATCGTTCTCTAAACCAGTCTCCAGGAAGAAG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
ENST00000464981.1
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTATCAGAAACAACCTTTTaGGGGCTCAATTTCACATCA +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSETTF*GLNFTS
Trigger: TGATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGA...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTCAATCTATATGCATaGTGTTGCTCATTCATTTGC +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLNLYA*CCSFIC
Trigger: GCAAATGAATGAGCAACACCATGCATATAGATTGAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCAGAAGGCACAGTAATTaGATTAGCGATGCTGTTACC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFRRHSN*ISDAVT
Trigger: GGTAACAGCATCGCTAATCCAATTACTGTGCCTTCT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGAAGGCACAGTAATTaGATTAGCGATGCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRRHSN*ISDAVT
Trigger: GGTAACAGCATCGCTAATCCAATTACTGTGCCTTCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATCTTTTCTGCTCCCTaGTTCCCACTGAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSIFSAP*FPLSIA
Trigger: TGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAATCTTTTCTGCTCCCTaGTTCCCACTGAGCATAGCA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELIFSAP*FPLSIA
Trigger: TGCTATGCTCAGTGGGAACCAGGGAGCAGAAAAGAT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGATAGGGAAGAAGGATaGATCTATAGCTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGEDREEG*IYSLKM
Trigger: CATCTTCAAGCTATAGATCCATCCTTCTTCCCTATC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAAGATCAGGTGTTTGTaGGTTATTCTTTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPKIRCL*VILYQE
Trigger: CTCTTGGTAAAGAATAACCCACAAACACCTGATCTT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAGGAGGCAATGGGTTTaGGGTAGGAGGTTTAGGATT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELRRQWV*GRRFRI
Trigger: AATCCTAAACCTCCTACCCCAAACCCATTGCCTCCT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTCCACGTCAAGTTTGTaGAAACGGGGAGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSTSSL*KRGDGN
Trigger: ATTGCCATCTCCCCGTTTCCACAAACTTGACGTGGA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
3UTR CAA 72 bp AAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTACAAAACCAGTTTACAA +
Preference number: 4 (lower is better)
Translates to: KGKFRILAQNAY*QVQPAYKTSLQ
Trigger: TTGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 72 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTaGTGGGTTATTCTTTACCAAGAGCGCCTTCCAATC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRC*WVILYQERLPI
Trigger: GATTGGAAGGCGCTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTCAGGGAAGAGCAACTaGCAACGTTCATCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSGKSN*QRSSCL
Trigger: CAGACAAGATGAACGTTGTCAGTTGCTCTTCCCTGA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTAATTTGCTCCAACTaGACACCCCTGCTGCCTGTT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELICSN*TPLLPV
Trigger: AACAGGCAGCAGGGGTGTTCAGTTGGAGCAAATTAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGATGAGTTCAAGTGTCTaGGTGTCTCCGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEMSSSV*VSPFRR
Trigger: CCTTCTAAACGGAGACACTCAGACACTTGAACTCAT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATGAGTTCAAGTGTCTaGGTGTCTCCGTTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSMSSSV*VSPFRR
Trigger: CCTTCTAAACGGAGACACTCAGACACTTGAACTCAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATGCACTTGTGCTTCTaGGAGGACTCATACATCAGA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLMHLCF*EDSYIR
Trigger: TCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGTAACAAGGTCATCTTaGATTGCCAACACAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLVTRSS*IANTAG
Trigger: TCCAGCTGTGTTGGCAATTCAAGATGACCTTGTTAC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGGAGGTATTTGTTGCTaGTTTCTAGCTCGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLGGICC*FLARAS
Trigger: ACTAGCTCGAGCTAGAAATCAGCAACAAATACCTCC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTCATCGTAGTCTTCTaGCTTGACAACAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLIVVF*LDNSHQ
Trigger: CTGGTGACTGTTGTCAAGGCAGAAGACTACGATGAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTCGCTTGCACTTGATTaGCACGAAGATCATAGTTAC +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSLALD*HEDHSY
Trigger: GTAACTATGATCTTCGTGGCAATCAAGTGCAAGCGA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAATGATGTTCCTCACATaGTCAGGGGACTTGGAACGG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEMMFLT*SGDLER
Trigger: CCGTTCCAAGTCCCCTGAGCATGTGAGGAACATCAT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATGGGGCTGACCTCATaGATGACTTTCTCGCTATCA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYMGLTS*MTFSLS
Trigger: TGATAGCGAGAAAGTCATGCATGAGGTCAGCCCCAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAAAACAAGAAGCTCCTaGTTCTTCACTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHKTRSS*FFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATCACATTGGTGAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTAAAACAAGAAGCTCCTaGTTCTTCACTAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: NHIGEQLKQEAPASSLASKTRSS*FFTSQC
Trigger: ACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTT...ACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTCACCAATGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464981.1
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTATATACACTTTGTACTaGTTACTCTATCCCTACGTA +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPIYTLY*LLYPYV
Trigger: TACGTAGGGATAGAGTAAGCAGTACAAAGTGTATAT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAATGAACTCTTAGGCTaGAAAAATACTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPNELLG*KNTMLA
Trigger: AGCCAACATAGTATTTTTGCAGCCTAAGAGTTCATT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCTTCAGAGGGAAATTTaGAGCCACACCAATATTTTG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLQREI*SHTNIL
Trigger: CAAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAAAGCCTTCCTAGTATaGACTTGTGCTTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEKAFLV*TCASER
Trigger: CCTCTCAGAAGCACAAGTGCATACTAGGAAGGCTTT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGCCCTTTGTCCTTGCTaGTTCAAGTGGACCACTTTT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYALCPC*FKWTTF
Trigger: AAAAGTGGTCCACTTGAAGCAGCAAGGACAAAGGGC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCCAAACTTGTCAGAATaGTTTGGGGGAACATTCAAC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSPNLSE*FGGTFN
Trigger: GTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCGCCGAAGTTTACTTaGAGGAGCGTCTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPPKFT*RSVLIS
Trigger: TGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCTGTCTTTTTGTCTTaGTCCTCGCTAATGGGAGAA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSVFLS*SSLMGE
Trigger: TTCTCCCATTAGCGAGGAGCAAGACAAAAAGACAGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTTCTTCCTGGAGACTaGTTTAGAGAACGATATCCT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLLPGD*FRERYP
Trigger: AGGATATCGTTCTCTAAACCAGTCTCCAGGAAGAAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAAAAGGGAGAATATTTaGCCCTGTGAACCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSKRENI*PCEPCS
Trigger: GCTACAAGGTTCACAGGGCCAAATATTCTCCCTTTT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAAAAGGGAGAATATTTaGCCCTGTGAACCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHKRENI*PCEPCS
Trigger: GCTACAAGGTTCACAGGGCCAAATATTCTCCCTTTT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGAAGTATACCTGTCTaGGGAATTGCCAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSRSIPV*GIAKAV
Trigger: AACTGCTTTGGCAATTCCCCAGACAGGTATACTTCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACTGATTAGAGATCAGTaGATCACTAAGCGAACAATT +
Preference number: 4 (lower is better)
Translates to: LVCTCASERTHTSDNCGELIRDQ*ITKRTI
Trigger: AATTGTTCGCTTAGTGATCCACTGATCTCTAATCAG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGATGATACTCTTGAGTaGTTCCAATTTTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLDDTLE*FQFSEI
Trigger: GATCTCTGAAAATTGGAACCACTCAAGAGTATCATC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAATCCTTTTCCACTCTaGATGCCCAATCGAGCTATC +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELNPFPL*MPNRAI
Trigger: GATAGCTCGATTGGGCATCCAGAGTGGAAAAGGATT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACCCCAGAAAGTGGATTaGAATTCCAGCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEPQKVD*NSSQNC
Trigger: GCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAATTGCCAACACAGCTaGAGCAACAGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQENCQHS*SNSQHH
Trigger: ATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAATTGCCAACACAGCTaGAGCAACAGTCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLNCQHS*SNSQHH
Trigger: ATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTGTTCAGCACATCGTTaGCAGCAGTATCACAATACA +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQECSAHR*QQYHNT
Trigger: TGTATTGTGATACTGCTGTCAACGATGTGCTGAACA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACAGCCTATCCAAAAATaGCTTTCTGCAATGATCTAT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKQPIQK*LSAMIY
Trigger: ATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGGTAGTATTCAGCACTaGATAAGAAATAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKGSIQH*IRNKDG
Trigger: TCCATCCTTATTTCTTATTCAGTGCTGAATACTACC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCAGTCAGTCATATGCTaGAGTAACACTATCAAGATG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHQSVIC*SNTIKM
Trigger: CATCTTGATAGTGTTACTTCAGCATATGACTGACTG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATTTCCACCCTGGTTTaGCAGGTAAACAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSISTLV*QVNSNS
Trigger: ACTATTACTGTTTACCTGTCAAACCAGGGTGGAAAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAATGGGGCTGACCTCATaGATGACTTTCTCGCTATCA +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEMGLTS*MTFSLS
Trigger: TGATAGCGAGAAAGTCATGCATGAGGTCAGCCCCAT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGCTGTCTCAGTTGTTTaGACTTTGTTTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFAVSVV*TLFLSV
Trigger: TACAGACAAAAACAAAGTGCAAACAACTGAGACAGC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCCAAAAATGACTTTCTaGAATGATCTATCATGGACC +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFPKMTF*NDLSWT
Trigger: GGTCCATGATAGATCATTGCAGAAAGTCATTTTTGG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAATGAACTCTTAGGCTaGAAAAATACTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLNELLG*KNTMLA
Trigger: AGCCAACATAGTATTTTTGCAGCCTAAGAGTTCATT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATTTGCAGGTACAGCCTaGCTACAAAACCAGTTTACA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELFAGTA*LQNQFT
Trigger: TGTAAACTGGTTTTGTAGGCAGGCTGTACCTGCAAA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGATCCTTGCTCAGAATaGCTATTTGCAGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEDPCSE*LFAGTA
Trigger: GGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCCAAACTTGTCAGAATaGTTTGGGGGAACATTCAAC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSPNLSE*FGGTFN
Trigger: GTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAAGGTCATCTTGAATTaGCAACACAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYKVILN*QHSWSN
Trigger: GTTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGACATACTGTACTTaGATCCCTCTAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHETYCT*IPLNFH
Trigger: GTGGAAATTTAGAGGGATGCAAGTACAGTATGTCTC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGAGACATACTGTACTTaGATCCCTCTAAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSETYCT*IPLNFH
Trigger: GTGGAAATTTAGAGGGATGCAAGTACAGTATGTCTC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGTGTTGCGGGTATTCTaGTTCTCCACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYVLRVF*FSTFRK
Trigger: TTTCCTGAATGTGGAGAACCAGAATACCCGCAACAC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTTCTTCCTGGAGACTaGTTTAGAGAACGATATCCT +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELLPGD*FRERYP
Trigger: AGGATATCGTTCTCTAAACCAGTCTCCAGGAAGAAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTCAGAAACAACCTTTTaGGGGCTCAATTTCACATCA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSETTF*GLNFTS
Trigger: TGATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTCAATCTATATGCATaGTGTTGCTCATTCATTTGC +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLNLYA*CCSFIC
Trigger: GCAAATGAATGAGCAACACCATGCATATAGATTGAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGATAGGGAAGAAGGATaGATCTATAGCTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHDREEG*IYSLKM
Trigger: CATCTTCAAGCTATAGATCCATCCTTCTTCCCTATC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAAAAGGGAGAATATTTaGCCCTGTGAACCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSKRENI*PCEPCS
Trigger: GCTACAAGGTTCACAGGGCCAAATATTCTCCCTTTT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCAAGATCAGGTGTTTGTaGGTTATTCTTTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: EQLKQEAPASSLASVVSFKIRCL*VILYQE
Trigger: CTCTTGGTAAAGAATAACCCACAAACACCTGATCTT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAAGATCAGGTGTTTGTaGGTTATTCTTTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKKIRCL*VILYQE
Trigger: CTCTTGGTAAAGAATAACCCACAAACACCTGATCTT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAGAACCAACCATTGGTaGGCAATTAAAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSRTNHW*AIKTRS
Trigger: GCTTCTTGTTTTAATTGCTCACCAATGGTTGGTTCT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCAGCCTATCCAAAAATaGCTTTCTGCAATGATCTAT +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSQPIQK*LSAMIY
Trigger: ATAGATCATTGCAGAAAGTCATTTTTGGATAGGCTG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCAGGAAGTGTGTGTCTaGAGAGATGCTAATTTAGAT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLQEVCV*RDANLD
Trigger: ATCTAAATTAGCATCTCTTCAGACACACACTTCCTG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCAGGAAGTGTGTGTCTaGAGAGATGCTAATTTAGAT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSQEVCV*RDANLD
Trigger: ATCTAAATTAGCATCTCTTCAGACACACACTTCCTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAATCTGACTGCCCACTaGGAACAAAGTATTTGGATA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELNLTAH*EQSIWI
Trigger: TATCCAAATACTTTGTTCTCAGTGGGCAGTCAGATT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACAGTCAGTCATATGCTaGAGTAACACTATCAAGATG +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELQSVIC*SNTIKM
Trigger: CATCTTGATAGTGTTACTTCAGCATATGACTGACTG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCATTCAACATCAAAATaGTCCCCAGAAAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEHSTSK*SPESGL
Trigger: CAATCCACTTTCTGGGGATCATTTTGATGTTGAATG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCATTCAACATCAAAATaGTCCCCAGAAAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLHSTSK*SPESGL
Trigger: CAATCCACTTTCTGGGGATCATTTTGATGTTGAATG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATTTCCACCCTGGTTTaGCAGGTAAACAGTAATAGT +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSISTLV*QVNSNS
Trigger: ACTATTACTGTTTACCTGTCAAACCAGGGTGGAAAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAAGCTCTCATATTCCTaGAGTCGAAAGGGCACATTG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEKLSYS*SRKGTL
Trigger: CAATGTGCCCTTTCGACTGCAGGAATATGAGAGCTT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTATATGCATGGTGTTaGTCATTCATTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLYAWC*SFICCL
Trigger: GAGACAGCAAATGAATGAGCAACACCATGCATATAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGTACTCAATCTATATaGATGGTGTTGCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYSTQSI*MVLLIH
Trigger: ATGAATGAGCAACACCATGCATATAGATTGAGTACT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGTACTCAATCTATATaGATGGTGTTGCTCATTCAT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSTQSI*MVLLIH
Trigger: ATGAATGAGCAACACCATGCATATAGATTGAGTACT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGCAGGAAAAATACTTTaGAAAGTGGTGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLAGKIL*KVVSNH
Trigger: GTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGCAGGAAAAATACTTTaGAAAGTGGTGAGCAATCAC +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSAGKIL*KVVSNH
Trigger: GTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGTATTTCTGACAACTaGAAATTAGATAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSISDN*KLDSSL
Trigger: TAGGCTGCTATCTAATTTGCAGTTGTCAGAAATACT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAATGAACTCTTAGGCTaGAAAAATACTATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKNELLG*KNTMLA
Trigger: AGCCAACATAGTATTTTTGCAGCCTAAGAGTTCATT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCTAATGACCTACAATaGTTTCCAATCAAGATCAGG +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPNDLQ*FPIKIR
Trigger: CCTGATCTTGATTGGAAAGCATTGTAGGTCATTAGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAAGGTCATCTTGAATTaGCAACACAGCTGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEKVILN*QHSWSN
Trigger: GTTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATCAGCAACAGAGACTaGTTAATGAGACATACTGTA +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSISNRD*LMRHTV
Trigger: TACAGTATGTCTCATTAAGCAGTCTCTGTTGCTGAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGAAACCGAGATGCAATaGAGACACTTGCTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYETEMQ*RHLLFC
Trigger: ACAAAACAGCAAGTGTCTGCATTGCATCTCGGTTTC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGTGTTGCGGGTATTCTaGTTCTCCACATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEVLRVF*FSTFRK
Trigger: TTTCCTGAATGTGGAGAACCAGAATACCCGCAACAC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGATGATACTCTTGAGTaGTTCCAATTTTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSDDTLE*FQFSEI
Trigger: GATCTCTGAAAATTGGAACCACTCAAGAGTATCATC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 72 bp GAGTATTCTCCAAGTACTCAATCTATATGCATGGTGTaGCTCATTCATTTGCTGTCTCAGTTGTTTGCACTT +
Preference number: 4 (lower is better)
Translates to: EYSPSTQSICMV*LIHLLSQLFAL
Trigger: AAGTGCAAACAACTGAGACAGCAAATGAATGAGCAACACCATGCATATAGATTGAGTACTTGGAGAATACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
3UTR CAA 72 bp GCAATTTTGGATGAAGAAGTATACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTAAAGCATGTCACACTT +
Preference number: 4 (lower is better)
Translates to: AILDEEVYLSGE*PKQLSLKHVTL
Trigger: AAGTGTGACATGCTTTAATGATAACTGCTTTGGCAATTCCCCAGACAGGTATACTTCTTCATCCAAAATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGGTAGTATTCAGCACTaGATAAGAAATAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELGSIQH*IRNKDG
Trigger: TCCATCCTTATTTCTTATTCAGTGCTGAATACTACC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCATTCAACATCAAAATaGTCCCCAGAAAGTGGATTG +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYHSTSK*SPESGL
Trigger: CAATCCACTTTCTGGGGATCATTTTGATGTTGAATG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATATATACACTTTGTACTaGTTACTCTATCCCTACGTA +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHIYTLY*LLYPYV
Trigger: TACGTAGGGATAGAGTAAGCAGTACAAAGTGTATAT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATCAGCAACAGAGACTaGTTAATGAGACATACTGTA +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLISNRD*LMRHTV
Trigger: TACAGTATGTCTCATTAAGCAGTCTCTGTTGCTGAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGGCTATTCACGTAGTTaGAGTCAAAAGAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHGYSRS*SQKNSF
Trigger: AAAACTATTCTTTTGACTCCAACTACGTGAATAGCC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGAAGTATACCTGTCTaGGGAATTGCCAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERSIPV*GIAKAV
Trigger: AACTGCTTTGGCAATTCCCCAGACAGGTATACTTCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTGATTAGAGATCAGTaGATCACTAAGCGAACAATT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLIRDQ*ITKRTI
Trigger: AATTGTTCGCTTAGTGATCCACTGATCTCTAATCAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCTGATTAGAGATCAGTaGATCACTAAGCGAACAATT +
Preference number: 4 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLIRDQ*ITKRTI
Trigger: AATTGTTCGCTTAGTGATCCACTGATCTCTAATCAG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTTGTCAGAATGCTTTaGGGGAACATTCAACATCAA +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLVRML*GNIQHQ
Trigger: TTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACAGGAAGTGTGTGTCTaGAGAGATGCTAATTTAGAT +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEQEVCV*RDANLD
Trigger: ATCTAAATTAGCATCTCTTCAGACACACACTTCCTG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR TCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACAGTCAGTCATATGCTaGAGTAACACTATCAAGATG +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEQSVIC*SNTIKM
Trigger: CATCTTGATAGTGTTACTTCAGCATATGACTGACTG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAGTATTTCTGACAACTaGAAATTAGATAGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELSISDN*KLDSSL
Trigger: TAGGCTGCTATCTAATTTGCAGTTGTCAGAAATACT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATATACACTTTGTACTaGTTACTCTATCCCTACGTA +
Preference number: 4 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSIYTLY*LLYPYV
Trigger: TACGTAGGGATAGAGTAAGCAGTACAAAGTGTATAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGGCTATTCACGTAGTTaGAGTCAAAAGAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELGYSRS*SQKNSF
Trigger: AAAACTATTCTTTTGACTCCAACTACGTGAATAGCC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGATGATACTCTTGAGTaGTTCCAATTTTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYDDTLE*FQFSEI
Trigger: GATCTCTGAAAATTGGAACCACTCAAGAGTATCATC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR GCA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGCTGTCTCAGTTGTTTaGACTTTGTTTTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEAVSVV*TLFLSV
Trigger: TACAGACAAAAACAAAGTGCAAACAACTGAGACAGC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CCA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGGCTATTCACGTAGTTaGAGTCAAAAGAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYGYSRS*SQKNSF
Trigger: AAAACTATTCTTTTGACTCCAACTACGTGAATAGCC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GCCGCCGCCGTGGGTACCGGGTGCTTCTCTTCTCTCCGTTTGGGCTaGGGTGTCGCTCCAAGGTCCGCCGCCGCCGCCGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: AAAVGTGCFSSLRLG*GVAPRSAAAAAAAA
Trigger: GGCGGCGGCGGCGGCGGCGGCGGCGGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp GCGGGGCCGCCGCCGTGGGTACCGGGTGCTTCTCTTCTCTCCGTTTaGGCTGGGGTGTCGCTCCAAGGTCCGCCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: AGPPPWVPGASLLSV*AGVSLQGPPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGCGGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp CCCGGGCAAGCCAGGCATGGTGCACGGGAGCTGTGCTGCCGTCTGTaGCCGCTCGTCCGTCTCCGCGCTGCGCCAGCCGCCGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: PGQARHGARELCCRL*PLVRLRAAPAAAAT
Trigger: AGTAGCGGCGGCGGCTGGCGCAGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp CCAGTGCCTCCCGGGCAAGCCAGGCATGGTGCACGGGAGCTGTGCTaGCGTCTGTGCCCGCTCGTCCGTCTCCGCGCTGCGCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: PVPPGQARHGARELC*RLCPLVRLRAAPAA
Trigger: GGCGGCTGGCGCAGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGGCACTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp GTGCCAGTGCCTCCCGGGCAAGCCAGGCATGGTGCACGGGAGCTGTaGTGCCGTCTGTGCCCGCTCGTCCGTCTCCGCGCTGCGCCAGCC +
Preference number: 5 (lower is better)
Translates to: VPVPPGQARHGAREL*CRLCPLVRLRAAPA
Trigger: GGCTGGCGCAGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGGCACTGGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp GGCGGAGGAGGCGCAGCCTTTCAGGCACTGCCCGGCCCGCCGCGGTaGACCGGCACTGAGGCTGGCGAACTCGCTGTCTGTGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: GGGGAAFQALPGPPR*TGTEAGELAVCAPG
Trigger: GCCAGGTGCACAGACAGCGAGTTCGCCAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTGCGCCTCCTCCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp AGCACCGGCAGCAGGAGCGACTCCATGGCTGCACGGGGCTCTGCCTaGCCTCGCCTCTCCACACCCCTCCGAGACCGACGCCGTCGGCGC +
Preference number: 5 (lower is better)
Translates to: STGSRSDSMAARGSA*PRLSTPLRDRRRRR
Trigger: GCGCCGACGGCGTCGGTCTCGGAGGGGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGCTGCCGGTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp GCTAGGGACGCGGGTGCCAGTGCCTCCCGGGCAAGCCAGGCATGGTaGACGGGAGCTGTGCTGCCGTCTGTGCCCGCTCGTCCGTCTCCG +
Preference number: 5 (lower is better)
Translates to: ARDAGASASRASQAW*TGAVLPSVPARPSP
Trigger: CGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGGCACTGGCACCCGCGTCCCTAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp CAGCAGCACCGGCAGCAGGAGCGACTCCATGGCTGCACGGGGCTCTaGCTGGCCTCGCCTCTCCACACCCCTCCGAGACCGACGCCGTCG +
Preference number: 5 (lower is better)
Translates to: QQHRQQERLHGCTGL*LASPLHTPPRPTPS
Trigger: CGACGGCGTCGGTCTCGGAGGGGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGCTGCCGGTGCTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp CGGGCTAGGGACGCGGGTGCCAGTGCCTCCCGGGCAAGCCAGGCATaGTGCACGGGAGCTGTGCTGCCGTCTGTGCCCGCTCGTCCGTCT +
Preference number: 5 (lower is better)
Translates to: RARDAGASASRASQA*CTGAVLPSVPARPS
Trigger: AGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGGCACTGGCACCCGCGTCCCTAGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp GAGGCGAAGGTAAAGAGGGCGGAGGAGGCGCAGCCTTTCAGGCACTaGCCGGCCCGCCGCGGTGCACCGGCACTGAGGCTGGCGAACTCG +
Preference number: 5 (lower is better)
Translates to: EAKVKRAEEAQPFRH*PARRGAPALRLANS
Trigger: CGAGTTCGCCAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTGCGCCTCCTCCGCCCTCTTTACCTTCGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 90 bp GGCTGCGGGTCGGGCGGCGTCTGCGCGGCCTGGAGGACGCACCGCTaGGTCCGGACAGTACTTGAGGCGAAGGTAAAGAGGGCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GCGSGGVCAAWRTHR*VRTVLEAKVKRAEE
Trigger: CTCCTCCGCCCTCTTTACCTTCGCCTCAAGTACTGTCCGGACTCAGCGGTGCGTCCTCCAGGCCGCGCAGACGCCGCCCGACCCGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 90 bp GGCCAACGGTGCCCAGGCGCGGCGGGTCGCCACCGTCTAGCGCAGTaGTTCGGAAGCTGTAGTGCGACTGCGTCTCGCGGTCCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GQRCPGAAGRHRLAQ*FGSCSATASRGPGS
Trigger: AGAGCCTGGACCGCGAGACGCAGTCGCACTACAGCTTCCGAATCACTGCGCTAGACGGTGGCGACCCGCCGCGCCTGGGCACCGTTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp CGCAGCCTTTCAGGCACTGCCCGGCCCGCCGCGGTGCACCGGCACTaGGGCTGGCGAACTCGCTGTCTGTGCACCTGGCATGCGCAAAGA +
Preference number: 5 (lower is better)
Translates to: RSLSGTARPAAVHRH*GWRTRCLCTWHAQR
Trigger: TCTTTGCGCATGCCAGGTGCACAGACAGCGAGTTCGCCAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp CAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGCGCTGGCCGCGCTaGGTTGGGCTCCCTTCCTCCCGGGCGCTCGCGCACTCGGGAGGT +
Preference number: 5 (lower is better)
Translates to: QERLDFIFPERRWPR*VGLPSSRALAHSGG
Trigger: ACCTCCCGAGTGCGCGAGCGCCCGGGAGGAAGGGAGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp ACAGTACCGGCCAGGAGAGGCGGGGCCGCCGCCGTGGGTACCGGGTaGTTCTCTTCTCTCCGTTTGGGCTGGGGTGTCGCTCCAAGGTCC +
Preference number: 5 (lower is better)
Translates to: TVPARRGGAAAVGTG*FSSLRLGWGVAPRS
Trigger: GGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGCCTCTCCTGGCCGGTACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp AAGCCTGCCGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTTaGCCACGTTGGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: KPAGGPARSPPLARL*PRWQSPSRRAAPLL
Trigger: TAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCGGCAGGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GCCGCCGCCGCGGGAGGAAGCCCTCCTAGCTCAGTTGCACGTCGCTaGGGTCCGCCTCAGCAGCTGCCACAGTCGACGATTTTGTCGCCG +
Preference number: 5 (lower is better)
Translates to: AAAAGGSPPSSVARR*GPPQQLPQSTILSP
Trigger: CGGCGACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGAGCTAGGAGGGCTTCCTCCCGCGGCGGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp GGGAGGCAACAACAGTACCGGCCAGGAGAGGCGGGGCCGCCGCCGTaGGTACCGGGTGCTTCTCTTCTCTCCGTTTGGGCTGGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: GRQQQYRPGEAGPPP*VPGASLLSVWAGVS
Trigger: CGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGCCTCTCCTGGCCGGTACTGTTGTTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp ACTAGGTGTGGAGCCGAGTTGGACACCACGCGAAAGGCTGAAGCCTaGCGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TRCGAELDTTRKAEA*RGSSAKPASRASLA
Trigger: GGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCTAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTTGGCCACGTTaGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCTACCGAGTACT +
Preference number: 5 (lower is better)
Translates to: GGPARSPPLARLWPR*QSPSRRAAPLLPST
Trigger: AGTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp CGTCTGCGCGGCCTGGAGGACGCACCGCTGAGTCCGGACAGTACTTaGGGCGAAGGTAAAGAGGGCGGAGGAGGCGCAGCCTTTCAGGCA +
Preference number: 5 (lower is better)
Translates to: RLRGLEDAPLSPDST*GEGKEGGGGAAFQA
Trigger: TGCCTGAAAGGCTGCGCCTCCTCCGCCCTCTTTACCTTCGCCTCAAGTACTGTCCGGACTCAGCGGTGCGTCCTCCAGGCCGCGCAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp TGGATCGTAAGCGCTGTCCAGCGGGATGCGCGTGCCAGGGCTGGCTaGCTCCGAGATCTCCAGCTCGATCTGTGCTGCCGGGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: WIVSAVQRDARARAG*LRDLQLDLCCRETG
Trigger: CCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GTTTACTTGCAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGCGCTaGCCGCGCTGCGTTGGGCTCCCTTCCTCCCGGGCGCTCGCGCAC +
Preference number: 5 (lower is better)
Translates to: VYLQERLDFIFPERR*PRCVGLPSSRALAH
Trigger: GTGCGCGAGCGCCCGGGAGGAAGGGAGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp GGTAGGAGGTTTAGGATTTCGGATGAAATCGCTCAGCCGGAATGCTaGGGAGCGCAACGCGCCAAGGGCCAGCGCCGGGCTAGGGACGCG +
Preference number: 5 (lower is better)
Translates to: GRRFRISDEIAQPEC*GAQRAKGQRRARDA
Trigger: CGCGTCCCTAGCCCGGCGCTGGCCCTTGGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGCGATTTCATCCGAAATCCTAAACCTCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp AGTCTGGATCGTAAGCGCTGTCCAGCGGGATGCGCGTGCCAGGGCTaGCTGCCTCCGAGATCTCCAGCTCGATCTGTGCTGCCGGGAAAC +
Preference number: 5 (lower is better)
Translates to: SLDRKRCPAGCACQG*LPPRSPARSVLPGN
Trigger: GTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GGCCTGTTCGGGAGAAAGGGGGTGTCGCAGACGGGAGTCAGTTACTaGCAAGCGCCGCGGGCACCCGGTTATAGGGTTGAGTCGGATGGC +
Preference number: 5 (lower is better)
Translates to: GLFGRKGVSQTGVSY*QAPRAPGYRVESDG
Trigger: GCCATCCGACTCAACCCTATAACCGGGTGCCCGCGGCGCTTGCCAGTAACTGACTCCCGTCTGCGACACCCCCTTTCTCCCGAACAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 90 bp GGGCACATTGCCCAGCAAACGGCACTGCACACGTCCATTGAGGCCTaGGTCGCGATCAGACACCCGCACCAAGGCGATCACGTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: GHIAQQTALHTSIEA*VAIRHPHQGDHVAR
Trigger: CCGGGCTACGTGATCGCCTTGGTGCGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp GCGCGTGCCAGGGCTGGCTGCCTCCGAGATCTCCAGCTCGATCTGTaGTGCCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTTGATCTC +
Preference number: 5 (lower is better)
Translates to: ARARAGCLRDLQLDL*CRETGRIVVQVLDL
Trigger: GAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp AGCTTCCTGAGTCTGGATCGTAAGCGCTGTCCAGCGGGATGCGCGTaGCAGGGCTGGCTGCCTCCGAGATCTCCAGCTCGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SFLSLDRKRCPAGCA*QGWLPPRSPARSVL
Trigger: CAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACTCAGGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp CGCCAAAGCTTCCTGAGTCTGGATCGTAAGCGCTGTCCAGCGGGATaGGCGTGCCAGGGCTGGCTGCCTCCGAGATCTCCAGCTCGATCT +
Preference number: 5 (lower is better)
Translates to: RQSFLSLDRKRCPAG*ACQGWLPPRSPARS
Trigger: AGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACTCAGGAAGCTTTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp TGGGGTAGGAGGTTTAGGATTTCGGATGAAATCGCTCAGCCGGAATaGTGCGGAGCGCAACGCGCCAAGGGCCAGCGCCGGGCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: WGRRFRISDEIAQPE*CGAQRAKGQRRARD
Trigger: GTCCCTAGCCCGGCGCTGGCCCTTGGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGCGATTTCATCCGAAATCCTAAACCTCCTACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 90 bp CAGCTCGTTGGGCGTGAGCTCGTAAGTCTGCACGCCAAAGCTTCCTaGGTCTGGATCGTAAGCGCTGTCCAGCGGGATGCGCGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QLVGRELVSLHAKAS*VWIVSAVQRDARAR
Trigger: CCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACTCAGGAAGCTTTGGCGTGCAGACTTACGAGCTCACGCCCAACGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp GGCCACTGTGCGGGTCGATCTGAAAGAGCTCGCGCGTGCGGTCGTTaGCGTAGCCATAGAAGGAGTAGACCACCTGGCCGTTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GHCAGRSERARACGR*RSHRRSRPPGRWCP
Trigger: AGGGCACCAACGGCCAGGTGGTCTACTCCTTCTATGGCTACGTCAACGACCGCACGCGCGAGCTCTTTCAGATCGACCCGCACAGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp CGTGCCAGGGCTGGCTGCCTCCGAGATCTCCAGCTCGATCTGTGCTaGCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTTGATCTCCAC +
Preference number: 5 (lower is better)
Translates to: RARAGCLRDLQLDLC*RETGRIVVQVLDLH
Trigger: GTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp TCTCGCGCGTCTTTGGCCACGTTGGCAATCACCGTCCCGGCGCGCTaGTCCTCTTCTACCGAGTACTTGAGATTAATGAGGGCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SRASLATLAITVPAR*SSSTEYLRLMRAAA
Trigger: GGCTGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp GCCCTCCTAGCTCAGTTGCACGTCGCTGGGGTCCGCCTCAGCAGCTaGCACAGTCGACGATTTTGTCGCCGCCGAAGTTTACTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: ALLAQLHVAGVRLSS*HSRRFCRRRSLLAG
Trigger: TCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGAGCTAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp GCTGGCGTTGAGGCGGATGACGGGTGTGTTGGGAGGCGAGTTTTCTaGCACGCTCACCGCGTAGGTGGACTCGCTAAACACCGGGTTGTT +
Preference number: 5 (lower is better)
Translates to: AGVEADDGCVGRRVF*HAHRVGGLAKHRVV
Trigger: AACAACCCGGTGTTTAGCGAGTCCACCTACGCGGTGAGCGTGCCAGAAAACTCGCCTCCCAACACACCCGTCATCCGCCTCAACGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp AGGCCTCTCCTCAGCCGGGTGGTCGCTGACATCTTTCCCAAAGGTTaGGAAAGTCCGTTTGGTGGGGCCGCAGTCGTCATAAGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: RPLLSRVVADIFPKG*ESPFGGAAVVISLD
Trigger: GTCGAGGCTTATGACGACTGCGGCCCCACCAAACGGACTTTCGCAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp AGTCGACGATTTTGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTTaGTTTCATCTTCCCGGAGAGGCGCTGGCCGCGCTGCGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: SRRFCRRRSLLAGAS*FHLPGEALAALRWA
Trigger: AGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp CAGCAGCTGCCACAGTCGACGATTTTGTCGCCGCCGAAGTTTACTTaGAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGCGCTGGCCGC +
Preference number: 5 (lower is better)
Translates to: QQLPQSTILSPPKFT*RSVLISSSRRGAGR
Trigger: GCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 90 bp ATTGAGCTGGACATGACCTCGAGCGAGATGATGCACTTGGGGCTCTaGCGGCACAGCAGATCACGGTCAATCTTCTGCTTGGTGACCAGC +
Preference number: 5 (lower is better)
Translates to: IELDMTSSEMMHLGL*RHSRSRSIFCLVTS
Trigger: GCTGGTCACCAAGCAGAAGATTGACCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCTCGAGGTCATGTCCAGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp AGAGTTGCGGGGTATGTAGACCTCGGCAGTGCCGTTAATCAGAGGTaGGGCTGTGATGACCGGGGTGTTGTCGTTGACGTCGAGGATGAT +
Preference number: 5 (lower is better)
Translates to: RVAGYVDLGSAVNQR*GCDDRGVVVDVEDD
Trigger: ATCATCCTCGACGTCAACGACAACACCCCGGTCATCACAGCCCCACCTCTGATTAACGGCACTGCCGAGGTCTACATACCCCGCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp TCGACAGTCCTCTTGCCTTTCAGGGTAGGCCTCTCCTCAGCCGGGTaGTCGCTGACATCTTTCCCAAAGGTTGCGAAAGTCCGTTTGGTG +
Preference number: 5 (lower is better)
Translates to: STVLLPFRVGLSSAG*SLTSFPKVAKVRLV
Trigger: CACCAAACGGACTTTCGCAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAGGCCTACCCTGAAAGGCAAGAGGACTGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp AGGGCCATTGTTGACATTGTTGACATACTGCTCCAGATCACGGGCTaGGGGAGCCAGGGCAATGGTGTAAGACACGGAAGGCTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RAIVDIVDILLQITG*GSQGNGVRHGRLGG
Trigger: CCCACCAAGCCTTCCGTGTCTTACACCATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGTCAACAATGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp TCCAGCCGTCCGTCCACCAGAATAGTGGAGAAGCTCTCATATTCCTaGAGTCGAAAGGGCACATTGCCCAGCAAACGGCACTGCACACGT +
Preference number: 5 (lower is better)
Translates to: SSRPSTRIVEKLSYS*SRKGTLPSKRHCTR
Trigger: ACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACTGCAGGAATATGAGAGCTTCTCCACTATTCTGGTGGACGGACGGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 90 bp CATGTCGTAGGTGACTCGGCCATTTTCGCCCTCATCGTAGTCTTCTaGCTTGACAACAGTCACCAGGTAGCCTATGCCAGAGTTGCGGGG +
Preference number: 5 (lower is better)
Translates to: HVVGDSAIFALIVVF*LDNSHQVAYARVAG
Trigger: CCCCGCAACTCTGGCATAGGCTACCTGGTGACTGTTGTCAAGGCAGAAGACTACGATGAGGGCGAAAATGGCCGAGTCACCTACGACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGCCCTCCTAGCTCAGTaGCACGTCGCTGGGGTCCGC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPALLAQ*HVAGVR
Trigger: GCGGACCCCAGCGACGTGCAACTGAGCTAGGAGGGC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACCGTCGCCGCGCGTCTaGATCTCCAGGCCGAACAGC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLPSPRV*ISRPNS
Trigger: GCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACGG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGCTCCAATGCTGAGGTaGCGGCGGACGCGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHAPMLR*RRTRRG
Trigger: CCCCCGCCGCGTCCGCCGCAACCTCAGCATTGGAGC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGCCTCTCGCGCGTCTTaGGCCACGTTGGCAATCACC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPASRAS*ATLAIT
Trigger: GGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACCGTCGCCGCGCGTCTaGATCTCCAGGCCGAACAGC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKPSPRV*ISRPNS
Trigger: GCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACGG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCTGGCTTCGAAGGGCTaGGGGGCGCGTCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLASKG*GARLSR
Trigger: CCTGGACAGACGCGCCCCCAAGCCCTTCGAAGCCAG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 90 bp GTCGTTCAGGTCCTTGATCTCCACCTTTATCACGCAGATTTCCATTaGGCTGGACATGACCTCGAGCGAGATGATGCACTTGGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VVQVLDLHLYHADFH*AGHDLERDDALGAL
Trigger: CAGAGCCCCAAGTGCATCATCTCGCTCGAGGTCATGTCCAGCTCAATGGAAATCTGCGTGATAAAGGTGGAGATCAAGGACCTGAACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp ACACAGAGAGCAGATAGGCGCCAGGCGTGTTGTTCTCCTGCACAATaGCCTGGTAGTAGGGCTTGGAAAAGTGCGGGTGGTTGTCATTTT +
Preference number: 5 (lower is better)
Translates to: TQRADRRQACCSPAQ*PGSRAWKSAGGCHF
Trigger: AAAATGACAACCACCCGCACTTTTCCAAGCCCTACTACCAGGTCATTGTGCAGGAGAACAACACGCCTGGCGCCTATCTGCTCTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp GCATCTGAGATCCCATGGAGGTCACACTGGTGTTCAGCACATCGTTaGCAGCAGTATCACAATACAGGCTCCGCTGGACATCATGCTCAC +
Preference number: 5 (lower is better)
Translates to: ASEIPWRSHWCSAHR*QQYHNTGSAGHHAH
Trigger: GTGAGCATGATGTCCAGCGGAGCCTGTATTGTGATACTGCTGTCAACGATGTGCTGAACACCAGTGTGACCTCCATGGGATCTCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 90 bp AGAGGAAGAGTGAGTGTGTGGTGTGGGGAGTGTGAGTGTGGAGTATaGGCAAGCAGGAGGCAATGGGTTTGGGGTAGGAGGTTTAGGATT +
Preference number: 5 (lower is better)
Translates to: RGRVSVWCGECECGV*ASRRQWVWGRRFRI
Trigger: AATCCTAAACCTCCTACCCCAAACCCATTGCCTCCTGCTTGCTCATACTCCACACTCACACTCCCCACACCACACACTCACTCTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAGGTGTGGAGCCGAGTaGGACACCACGCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPRCGAE*DTTRKA
Trigger: AGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACACCCGGTTATAGGGTaGAGTCGGATGGCGGTCCCG +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHPVIG*SRMAVP
Trigger: CGGGACCGCCATCCGACTCAACCCTATAACCGGGTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCCGTCGCCGCGCGTCTaGATCTCCAGGCCGAACAGC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSPSPRV*ISRPNS
Trigger: GCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACGG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAACGGATGACGGGTGTGTaGGGAGGCGAGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGERMTGV*GGEFSG
Trigger: GCCAGAAAACTCGCCTCCCAACACACCCGTCATCCG...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAACGCTGACGGTGACCTaGCAGTGTGCCGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGETLTVT*QCAGME
Trigger: TTCCATCCCGGCACACTGCAAGGTCACCGTCAGCGT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAACCGGCGGATTGTCATaGGTGTCCAGCACGCTGACG +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLTGGLS*VSSTLT
Trigger: CGTCAGCGTGCTGGACACCAATGACAATCCGCCGGT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAGTCGAAAGGGCACATaGCCCAGCAAACGGCACTGC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSRKGT*PSKRHC
Trigger: GCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGGCAGAGGCACACCGTaGATAATCAGGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPGRGTP*IIRSGC
Trigger: GCAGCCTGACCTGATTATCAACGGTGTGCCTCTGCC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 90 bp GTGTTCAGCACATCGTTGACAGCAGTATCACAATACAGGCTCCGCTaGACATCATGCTCACTGTCAGTTTGGTCACTCTCCTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: VFSTSLTAVSQYRLR*TSCSLSVWSLSSCP
Trigger: TGGACATGAGGAGAGTGACCAAACTGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTGTGATACTGCTGTCAACGATGTGCTGAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGCGTCTTTGGCCACGTaGGCAATCACCGTCCCGGCG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEASLAT*AITVPA
Trigger: CGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGCCTCTCGCGCGTCTTaGGCCACGTTGGCAATCACC +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHASRAS*ATLAIT
Trigger: GGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGGTGTGGAGCCGAGTaGGACACCACGCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKRCGAE*DTTRKA
Trigger: AGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGGTGTGGAGCCGAGTaGGACACCACGCGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRCGAE*DTTRKA
Trigger: AGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGCGAGATGATGCACTaGGGGCTCTGGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSEMMH*GLWRHS
Trigger: GCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCGGATGACGGGTGTGTaGGGAGGCGAGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYRMTGV*GGEFSG
Trigger: GCCAGAAAACTCGCCTCCCAACACACCCGTCATCCG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTCTGGATCGCTGGCGTaGAGGCGGATGACGGGTGTG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSGSLA*RRMTGV
Trigger: CACACCCGTCATCCGCCTCAACGCCAGCGATCCAGA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATGTGCCGGGATGGAATaGGGCCCCAAGTCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKCAGME*GPKSLA
Trigger: GGCTAAGGACTTGGGGCCCAATTCCATCCCGGCACA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTGTGCCGGGATGGAATaGGGCCCCAAGTCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFCAGME*GPKSLA
Trigger: GGCTAAGGACTTGGGGCCCAATTCCATCCCGGCACA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACACTGCACACGTCCATaGAGGCCTGAGTCGCGATCA +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHCTRP*RPESRS
Trigger: TGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGTCGAAAGGGCACATaGCCCAGCAAACGGCACTGC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSRKGT*PSKRHC
Trigger: GCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTGGAAGGCCGCCGTCCTaGGCCAGCACCTTGAATTCG +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSGRPPS*ASTLNS
Trigger: CGAATTCAAGGTGCTGGCCAAGGACGGCGGCCTTCC...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGTGATGACCGGGGTGTaGTCGTTGACGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEVMTGV*SLTSRM
Trigger: CATCCTCGACGTCAACGACAACACCCCGGTCATCAC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGTTGCGAAAGTCCGTTaGGTGGGGCCGCAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFVAKVR*VGPQSS
Trigger: TGACGACTGCGGCCCCACCAAACGGACTTTCGCAAC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGTTGCGAAAGTCCGTTaGGTGGGGCCGCAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKVAKVR*VGPQSS
Trigger: TGACGACTGCGGCCCCACCAAACGGACTTTCGCAAC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATATCGCCTCACAGCCATaGCCTGCCTCCCGGATAACG +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYIASQP*PASRIT
Trigger: CGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGAT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGAGAGAGTACCCGCTaGGAATGCGCCCTCCGGGGT +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGESTR*ECALRG
Trigger: ACCCCGGAGGGCGCATTCCAAGCGGGTACTCTCTCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp ACATCGTTGACAGCAGTATCACAATACAGGCTCCGCTGGACATCATaGTCACTGTCAGTTTGGTCACTCTCCTCATGTCCACTATCCTTC +
Preference number: 5 (lower is better)
Translates to: TSLTAVSQYRLRWTS*SLSVWSLSSCPLSF
Trigger: GAAGGATAGTGGACATGAGGAGAGTGACCAAACTGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTGTGATACTGCTGTCAACGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGCCTCTCGCGCGTCTTaGGCCACGTTGGCAATCACC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSASRAS*ATLAIT
Trigger: GGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGCGAGATGATGCACTaGGGGCTCTGGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESEMMH*GLWRHS
Trigger: GCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGGGAAACTGGGCGCATaGTCGTTCAGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEGKLGA*SFRSLI
Trigger: GATCAAGGACCTGAACGACAATGCGCCCAGTTTCCC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCTGGATCGCTGGCGTaGAGGCGGATGACGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSGSLA*RRMTGV
Trigger: CACACCCGTCATCCGCCTCAACGCCAGCGATCCAGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTCTGGATCGCTGGCGTaGAGGCGGATGACGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSGSLA*RRMTGV
Trigger: CACACCCGTCATCCGCCTCAACGCCAGCGATCCAGA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTACGCTGACGGTGACCTaGCAGTGTGCCGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSTLTVT*QCAGME
Trigger: TTCCATCCCGGCACACTGCAAGGTCACCGTCAGCGT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACACTGCACACGTCCATaGAGGCCTGAGTCGCGATCA +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKHCTRP*RPESRS
Trigger: TGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGAAGGCCGCCGTCCTaGGCCAGCACCTTGAATTCG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGRPPS*ASTLNS
Trigger: CGAATTCAAGGTGCTGGCCAAGGACGGCGGCCTTCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCACCGGGGTGTTGTCGTaGACGTCGAGGATGATGACC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFTGVLS*TSRMMT
Trigger: GGTCATCATCCTCGACGTCAACGACAACACCCCGGT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTGGTTAGCACTGGTGTaGCGGGTATTCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPWLALV*RVFWFS
Trigger: GGAGAACCAGAATACCCGCAACACCAGTGCTAACCA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCCCTCCACGTCAAGTTaGTGGAAACGGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFPSTSS*WKRGDG
Trigger: GCCATCTCCCCGTTTCCACAAACTTGACGTGGAGGG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGAGGCTGCCAGAGCTaGAGCGCGCTCCCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERGCQS*SALPRA
Trigger: AGCGCGAGGGAGCGCGCTCAAGCTCTGGCAGCCTCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGCGTCTTTGGCCACGTaGGCAATCACCGTCCCGGCG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEASLAT*AITVPA
Trigger: CGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCGGTCAATCTTCTGCTaGGTGACCAGCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHRSIFC*VTSRPE
Trigger: CTCTGGCCTGCTGGTCACCAAGCAGAAGATTGACCG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACTAAACACCGGGTTGTaGTCATTGGAGTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLLNTGL*SLESVT
Trigger: GGTGACCGACTCCAATGACAACAACCCGGTGTTTAG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATCGCTAAACACCGGGTaGTTGTCATTGGAGTCGGTC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGESLNTG*LSLESV
Trigger: GACCGACTCCAATGACAACAACCCGGTGTTTAGCGA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCGGATGACGGGTGTGTaGGGAGGCGAGTTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQERMTGV*GGEFSG
Trigger: GCCAGAAAACTCGCCTCCCAACACACCCGTCATCCG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTGTGCCGGGATGGAATaGGGCCCCAAGTCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSCAGME*GPKSLA
Trigger: GGCTAAGGACTTGGGGCCCAATTCCATCCCGGCACA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACGCTGACGGTGACCTaGCAGTGTGCCGGGATGGAA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTLTVT*QCAGME
Trigger: TTCCATCCCGGCACACTGCAAGGTCACCGTCAGCGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTACCGGCGGATTGTCATaGGTGTCCAGCACGCTGACG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSTGGLS*VSSTLT
Trigger: CGTCAGCGTGCTGGACACCAATGACAATCCGCCGGT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCACTGCACACGTCCATaGAGGCCTGAGTCGCGATCA +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSHCTRP*RPESRS
Trigger: TGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAATTGTGAGGTTGTATaGGTCGTGCTGCTCGCGGTC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLNCEVV*VVLLAV
Trigger: GACCGCGAGCAGCACGACCAATACAACCTCACAATT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGGAAGGCCGCCGTCCTaGGCCAGCACCTTGAATTCG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYGRPPS*ASTLNS
Trigger: CGAATTCAAGGTGCTGGCCAAGGACGGCGGCCTTCC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGACCCGCACCGTAGCGTaGCTTTGCAGTGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQETRTVA*LCSEGR
Trigger: CCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTACCCGCACCGTAGCGTaGCTTTGCAGTGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSTRTVA*LCSEGR
Trigger: CCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTGACAACGTTCATCTaGTCTGTCTCCTCCACATCC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLTTFI*SVSSTS
Trigger: GGATGTGGAGGAGACAGACAAGATGAACGTTGTCAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTAAGGTGGAGCTGCTCTaGATTAAATGGGCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPKVELL*IKWARL
Trigger: TAGCCGAGCCCATTTAATCAAGAGCAGCTCCACCTT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGTTGCGAAAGTCCGTTaGGTGGGGCCGCAGTCGTCA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLVAKVR*VGPQSS
Trigger: TGACGACTGCGGCCCCACCAAACGGACTTTCGCAAC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAATCGCCTCACAGCCATaGCCTGCCTCCCGGATAACG +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELIASQP*PASRIT
Trigger: CGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGAT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATCGCCTCACAGCCATaGCCTGCCTCCCGGATAACG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSIASQP*PASRIT
Trigger: CGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAACACCAGGGGACTCTTaGTTGCGACCTTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGETPGDS*LRPSFR
Trigger: TCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGGTGT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLAQNAY*QVQPAY
Trigger: GTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGENCPLS*LLQVDH
Trigger: GTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTACTTGCAGGAGCGTCTaGATTTCATCTTCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPTCRSV*ISSSRR
Trigger: TCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGT...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 90 bp ATTCTCTTTCCCCTTAGGCTCACTTTCTCCTCTGTCTTTTTGTCTTaGTCCTCGCTAATGGGAGAAACCGAGATGCAATGCAGACACTTG +
Preference number: 5 (lower is better)
Translates to: ILFPLRLTFSSVFLS*SSLMGETEMQCRHL
Trigger: CAAGTGTCTGCATTGCATCTCGGTTTCTCCCATTAGCGAGGAGCAAGACAAAAAGACAGAGGAGAAAGTGAGCCTAAGGGGAAAGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTCTTCTACCGAGTACTaGAGATTAATGAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPSSTEY*RLMRAA
Trigger: TGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAGGCCAGAGCTGGGATaGATGTCCACTAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHRPELG*MSTRCG
Trigger: TCCACACCTAGTGGACATCAATCCCAGCTCTGGCCT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCGGTCAATCTTCTGCTaGGTGACCAGCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSRSIFC*VTSRPE
Trigger: CTCTGGCCTGCTGGTCACCAAGCAGAAGATTGACCG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGCGAGATGATGCACTaGGGGCTCTGGCGGCACAGC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESEMMH*GLWRHS
Trigger: GCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTTGGAGTCGGTCACCTaGATACTAAGGCCAACGGTG +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLESVT*ILRPTV
Trigger: CACCGTTGGCCTTAGTATCAAGGTGACCGACTCCAA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATCTAAACACCGGGTTGTaGTCATTGGAGTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLNTGL*SLESVT
Trigger: GGTGACCGACTCCAATGACAACAACCCGGTGTTTAG...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACCGGCGGATTGTCATaGGTGTCCAGCACGCTGACG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTGGLS*VSSTLT
Trigger: CGTCAGCGTGCTGGACACCAATGACAATCCGCCGGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTTGATGACCGGCGGATaGTCATTGGTGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLMTGG*SLVSST
Trigger: CGTGCTGGACACCAATGACAATCCGCCGGTCATCAA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCCTTGGCCAGCACCTaGAATTCGAACGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSLAST*NSNALV
Trigger: GACCAAGGCGTTCGAATTCAAGGTGCTGGCCAAGGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTCCTTGGCCAGCACCTaGAATTCGAACGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSLAST*NSNALV
Trigger: GACCAAGGCGTTCGAATTCAAGGTGCTGGCCAAGGA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGTGATGACCGGGGTGTaGTCGTTGACGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEVMTGV*SLTSRM
Trigger: CATCCTCGACGTCAACGACAACACCCCGGTCATCAC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATAGTTCACAGAGCCCATaGACTCTTGGGCATCGAGAG +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYSSQSP*TLGHRE
Trigger: CTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAACT...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTGGTTAGCACTGGTGTaGCGGGTATTCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYWLALV*RVFWFS
Trigger: GGAGAACCAGAATACCCGCAACACCAGTGCTAACCA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGGCAGAGGCACACCGTaGATAATCAGGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELGRGTP*IIRSGC
Trigger: GCAGCCTGACCTGATTATCAACGGTGTGCCTCTGCC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTACATCTTTCCCAAAGGTaGCGAAAGTCCGTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLHLSQR*RKSVWW
Trigger: CCACCAAACGGACTTTCGCAACCTTTGGGAAAGATG...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCCCGGATAACGCTGTaGACCTTGGGGCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSRITL*TLGLQM
Trigger: CATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGGACGAGTAGGGCCATaGTTGACATTGTTGACATAC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPGRVGP*LTLLTY
Trigger: GTATGTCAACAATGTCAACAATGGCCCTACTCGTCC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCACACCAGGGGACTCTTaGTTGCGACCTTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFTPGDS*LRPSFR
Trigger: TCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGGTGT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAAGCAAAGTAGCGGCATaGGGAAGTACTCGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSKVAA*GSTRAS
Trigger: TGAAGCTCGAGTACTTCCCAATGCCGCTACTTTGCT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFAQNAY*QVQPAY
Trigger: GTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGC...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATCCCCAGAAAGTGGATaGGAATTCCAGCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGESPESG*EFQPEL
Trigger: CAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATTCTCTTCTCTCCGTTaGGGCTGGGGTGTCGCTCCA +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELFSSLR*GWGVAP
Trigger: TGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTTTGAAGGTGGAGCTCTaGATTAAATGGGCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLKVEL*IKWARL
Trigger: TAGCCGAGCCCATTTAATCAAGAGCTCCACCTTCAA...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTATCTTCTACCGAGTACTaGAGATTAATGAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSSTEY*RLMRAA
Trigger: TGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGA...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGGCCAGAGCTGGGATaGATGTCCACTAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQERPELG*MSTRCG
Trigger: TCCACACCTAGTGGACATCAATCCCAGCTCTGGCCT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATTGTCGTTCAGGTCCTaGATCTCCACCTTTATCACG +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGELSFRS*ISTFIT
Trigger: CGTGATAAAGGTGGAGATCAAGGACCTGAACGACAA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGGAAACTGGGCGCATaGTCGTTCAGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGKLGA*SFRSLI
Trigger: GATCAAGGACCTGAACGACAATGCGCCCAGTTTCCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGGGAAACTGGGCGCATaGTCGTTCAGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELGKLGA*SFRSLI
Trigger: GATCAAGGACCTGAACGACAATGCGCCCAGTTTCCC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTTGATGACCGGCGGATaGTCATTGGTGTCCAGCACG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELMTGG*SLVSST
Trigger: CGTGCTGGACACCAATGACAATCCGCCGGTCATCAA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTTGACTGACAGCAGGTaGATGACCGGCGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLTDSR*MTGGLS
Trigger: TGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAATTGTGAGGTTGTATaGGTCGTGCTGCTCGCGGTC +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHNCEVV*VVLLAV
Trigger: GACCGCGAGCAGCACGACCAATACAACCTCACAATT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACAGCACGGTAAAGGACTaGGCACTCTGCAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSTVKD*ALCSMG
Trigger: GCCCATGCTGCAGAGTGCCAAGTCCTTTACCGTGCT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGAAAAGTGCGGGTGGTaGTCATTTTCGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEEKCGW*SFSSVM
Trigger: CATCACTGACGAAAATGACAACCACCCGCACTTTTC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCCTTGGCCAGCACCTaGAATTCGAACGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSLAST*NSNALV
Trigger: GACCAAGGCGTTCGAATTCAAGGTGCTGGCCAAGGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACCCGCACCGTAGCGTaGCTTTGCAGTGAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETRTVA*LCSEGR
Trigger: CCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACCGGGGTGTTGTCGTaGACGTCGAGGATGATGACC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTGVLS*TSRMMT
Trigger: GGTCATCATCCTCGACGTCAACGACAACACCCCGGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGTTCTGACTTCGCCATaGACCTGGTCTATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPVLTSP*TWSISK
Trigger: CTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAAC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAGTTCACAGAGCCCATaGACTCTTGGGCATCGAGAG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSSQSP*TLGHRE
Trigger: CTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAACT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCTGACAACGTTCATCTaGTCTGTCTCCTCCACATCC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLTTFI*SVSSTS
Trigger: GGATGTGGAGGAGACAGACAAGATGAACGTTGTCAG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTTGCCCTCTAAGTCCTaGAAGGTGGAGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLPSKS*KVELLL
Trigger: CAAGAGCAGCTCCACCTTCAAGGACTTAGAGGGCAA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATGCTCACTGTCAGTTaGGTCACTCTCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKMLTVS*VTLLMS
Trigger: GGACATGAGGAGAGTGACCAAACTGACAGTGAGCAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACATCGACAGTCCTCTaGCCTTTCAGGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTSTVL*PFRVGL
Trigger: GAGGCCTACCCTGAAAGGCAAGAGGACTGTCGATGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTCCCGGATAACGCTGTaGACCTTGGGGCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYSRITL*TLGLQM
Trigger: CATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGGGCCATTGTTGACATaGTTGACATACTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEGPLLT*LTYCSR
Trigger: TCTGGAGCAGTATGTCAACAATGTCAACAATGGCCC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGGACGAGTAGGGCCATaGTTGACATTGTTGACATAC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLGRVGP*LTLLTY
Trigger: GTATGTCAACAATGTCAACAATGGCCCTACTCGTCC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCACCCCTGCTGCCTGTaGAAACAAGGGACTGTCACA +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSHPCCL*KQGTVT
Trigger: TGTGACAGTCCCTTGTTTCAACAGGCAGCAGGGGTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGCTCAGAATGCCTATTaGCAGGTACAGCCTGCCTAC +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHAQNAY*QVQPAY
Trigger: GTAGGCAGGCTGTACCTGCAAATAGGCATTCTGAGC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGAGCTAGTCTGGCTCTaGGTCATTAAAGTCTGTATC +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPELVWL*VIKVCI
Trigger: GATACAGACTTTAATGACCAAGAGCCAGACTAGCTC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCACAGTCGACGATTTaGTCGCCGCCGAAGTTTACT +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPQSTI*SPPKFT
Trigger: AGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTTGTCGTTCAGGTCCTaGATCTCCACCTTTATCACG +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLSFRS*ISTFIT
Trigger: CGTGATAAAGGTGGAGATCAAGGACCTGAACGACAA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTTGTCGTTCAGGTCCTaGATCTCCACCTTTATCACG +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFLSFRS*ISTFIT
Trigger: CGTGATAAAGGTGGAGATCAAGGACCTGAACGACAA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTTGGAGTCGGTCACCTaGATACTAAGGCCAACGGTG +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLESVT*ILRPTV
Trigger: CACCGTTGGCCTTAGTATCAAGGTGACCGACTCCAA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATACCGGGTTGTTGTCATaGGAGTCGGTCACCTTGATA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHTGLLS*ESVTLI
Trigger: TATCAAGGTGACCGACTCCAATGACAACAACCCGGT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTAAACACCGGGTTGTaGTCATTGGAGTCGGTCACC +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLNTGL*SLESVT
Trigger: GGTGACCGACTCCAATGACAACAACCCGGTGTTTAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGTCGCTAAACACCGGGTaGTTGTCATTGGAGTCGGTC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESLNTG*LSLESV
Trigger: GACCGACTCCAATGACAACAACCCGGTGTTTAGCGA...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAATTGTGAGGTTGTATaGGTCGTGCTGCTCGCGGTC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSNCEVV*VVLLAV
Trigger: GACCGCGAGCAGCACGACCAATACAACCTCACAATT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGCACGGTAAAGGACTaGGCACTCTGCAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESTVKD*ALCSMG
Trigger: GCCCATGCTGCAGAGTGCCAAGTCCTTTACCGTGCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGTGATGACCGGGGTGTaGTCGTTGACGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEVMTGV*SLTSRM
Trigger: CATCCTCGACGTCAACGACAACACCCCGGTCATCAC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCTTTGTTGTCTCGCTaGCACTTGATTGCCACGAAG +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSLLSR*HLIATK
Trigger: CTTCGTGGCAATCAAGTGCAAGCGAGACAACAAAGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCTGACAACGTTCATCTaGTCTGTCTCCTCCACATCC +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSLTTFI*SVSSTS
Trigger: GGATGTGGAGGAGACAGACAAGATGAACGTTGTCAG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGGCAGAGGCACACCGTaGATAATCAGGTCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEGRGTP*IIRSGC
Trigger: GCAGCCTGACCTGATTATCAACGGTGTGCCTCTGCC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCCTCTAAGTCCTaGAAGGTGGAGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLPSKS*KVELLL
Trigger: CAAGAGCAGCTCCACCTTCAAGGACTTAGAGGGCAA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACATCGACAGTCCTCTaGCCTTTCAGGGTAGGCCTC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTSTVL*PFRVGL
Trigger: GAGGCCTACCCTGAAAGGCAAGAGGACTGTCGATGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATAACGCTGTTGACCTaGGGGCTGCAGATGGTCACA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLITLLT*GLQMVT
Trigger: TGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATCCCGGATAACGCTGTaGACCTTGGGGCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESRITL*TLGLQM
Trigger: CATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCATTGTTGACATTGTaGACATACTGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPLLTL*TYCSRS
Trigger: TGATCTGGAGCAGTATGTCAACAATGTCAACAATGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGGACGAGTAGGGCCATaGTTGACATTGTTGACATAC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKGRVGP*LTLLTY
Trigger: GTATGTCAACAATGTCAACAATGGCCCTACTCGTCC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCCAGGGGACTCTTTGTaGCGACCTTCCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSPGDSL*RPSFRM
Trigger: CATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTGTGTTGCTCATTCATTaGCTGTCTCAGTTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPVLLIH*LSQLFA
Trigger: TGCAAACAACTGAGACAGCAAATGAATGAGCAACAC...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCTGAGAACAAAGTATTaGGATAGGGAAGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPLRTKY*DREEGW
Trigger: CCATCCTTCTTCCCTATCCAAATACTTTGTTCTCAG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQENCPLS*LLQVDH
Trigger: GTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCCCTAAACTGCCCTTaGTCCTTGCTGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSLNCP*SLLLQV
Trigger: CACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAAGCACAAGGAGGTATTaGTTGCTGATTTCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGESTRRY*LLISSS
Trigger: CGAGCTAGAAATCAGCAACAAATACCTCCTTGTGCT...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGCCGCCGAAGTTTACTaGCAGGAGCGTCTTGATTTC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSAAEVY*QERLDF
Trigger: GAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATTTGCCCTCTAAGTCCTaGAAGGTGGAGCTCTTGATT +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYLPSKS*KVELLI
Trigger: AATCAAGAGCTCCACCTTCAAGGACTTAGAGGGCAA...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGGCCAGAGCTGGGATaGATGTCCACTAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHERPELG*MSTRCG
Trigger: TCCACACCTAGTGGACATCAATCCCAGCTCTGGCCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTTGGAGTCGGTCACCTaGATACTAAGGCCAACGGTG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLESVT*ILRPTV
Trigger: CACCGTTGGCCTTAGTATCAAGGTGACCGACTCCAA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGACCGGGTTGTTGTCATaGGAGTCGGTCACCTTGATA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLTGLLS*ESVTLI
Trigger: TATCAAGGTGACCGACTCCAATGACAACAACCCGGT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAACCGGGTTGTTGTCATaGGAGTCGGTCACCTTGATA +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELTGLLS*ESVTLI
Trigger: TATCAAGGTGACCGACTCCAATGACAACAACCCGGT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTTGACTGACAGCAGGTaGATGACCGGCGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLTDSR*MTGGLS
Trigger: TGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTCCACAAGCTCACTGTaGACTGACAGCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSTSSL*TDSRLM
Trigger: CATCAACCTGCTGTCAGTCAACAGTGAGCTTGTGGA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATCCACAAGCTCACTGTaGACTGACAGCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELSTSSL*TDSRLM
Trigger: CATCAACCTGCTGTCAGTCAACAGTGAGCTTGTGGA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAAAAGTGCGGGTGGTaGTCATTTTCGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHEKCGW*SFSSVM
Trigger: CATCACTGACGAAAATGACAACCACCCGCACTTTTC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTTGAATTCGAACGCCTaGGTCTGCTCGTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLNSNA*VCSWLK
Trigger: CTTTAACCACGAGCAGACCAAGGCGTTCGAATTCAA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTTCTTTGTTGTCTCGCTaGCACTTGATTGCCACGAAG +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSLLSR*HLIATK
Trigger: CTTCGTGGCAATCAAGTGCAAGCGAGACAACAAAGA...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTGGTTAGCACTGGTGTaGCGGGTATTCTGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYWLALV*RVFWFS
Trigger: GGAGAACCAGAATACCCGCAACACCAGTGCTAACCA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAAGGTGGAGCTGCTCTaGATTAAATGGGCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSKVELL*IKWARL
Trigger: TAGCCGAGCCCATTTAATCAAGAGCAGCTCCACCTT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLSFRL*PSKSLK
Trigger: CTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGATGCTCACTGTCAGTTaGGTCACTCTCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEMLTVS*VTLLMS
Trigger: GGACATGAGGAGAGTGACCAAACTGACAGTGAGCAT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCATCTTTCCCAAAGGTaGCGAAAGTCCGTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEHLSQR*RKSVWW
Trigger: CCACCAAACGGACTTTCGCAACCTTTGGGAAAGATG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATAACGCTGTTGACCTaGGGGCTGCAGATGGTCACA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYITLLT*GLQMVT
Trigger: TGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGGGCCATTGTTGACATaGTTGACATACTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHGPLLT*LTYCSR
Trigger: TCTGGAGCAGTATGTCAACAATGTCAACAATGGCCC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCCAGGGGACTCTTTGTaGCGACCTTCCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYPGDSL*RPSFRM
Trigger: CATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACACCAGGGGACTCTTaGTTGCGACCTTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTPGDS*LRPSFR
Trigger: TCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGGTGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATTCAGAAACAACCTTTaGGGGGCTCAATTTCACATC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEFRNNL*GAQFHI
Trigger: GATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGAA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAAGCAAAGTAGCGGCATaGGGAAGTACTCGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELSKVAA*GSTRAS
Trigger: TGAAGCTCGAGTACTTCCCAATGCCGCTACTTTGCT...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGGCAGGAAAAATACTTaGCAAAGTGGTGAGCAATCA +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLGRKNT*QSGEQS
Trigger: TGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAATACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTA +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEYLSGE*PKQLSL
Trigger: TAATGATAACTGCTTTGGCAATTCCCCAGACAGGTA...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATCCCTAAACTGCCCTTaGTCCTTGCTGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELSLNCP*SLLLQV
Trigger: CACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTCCCTAAACTGCCCTTaGTCCTTGCTGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSLNCP*SLLLQV
Trigger: CACTTGAAGCAGCAAGGACAAAGGGCAGTTTAGGGA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTCAAGGTCATCTTGAATaGCCAACACAGCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSQGHLE*PTQLEQ
Trigger: TTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTTG...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGTAACAAGGTCATCTaGAATTGCCAACACAGCTGG +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSNKVI*NCQHSW
Trigger: CCAGCTGTGTTGGCAATTCAAGATGACCTTGTTACT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCATGGTGTTAGCTGGTTaGTTTGCTAAGGTTGACAGC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFMVLAG*FAKVDS
Trigger: GCTGTCAACCTTAGCAAACAAACCAGCTAACACCAT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAACAAGGAGGTATTTGTaGCTGATTTCTAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKTRRYL*LISSSS
Trigger: GCTCGAGCTAGAAATCAGCAACAAATACCTCCTTGT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCACAAGGAGGTATTTGTaGCTGATTTCTAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFTRRYL*LISSSS
Trigger: GCTCGAGCTAGAAATCAGCAACAAATACCTCCTTGT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCAGCACAAGGAGGTATTaGTTGCTGATTTCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSTRRY*LLISSS
Trigger: CGAGCTAGAAATCAGCAACAAATACCTCCTTGTGCT...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTCTTCTACCGAGTACTaGAGATTAATGAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSSTEY*RLMRAA
Trigger: TGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGAAAAGTGCGGGTGGTaGTCATTTTCGTCAGTGATG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEEKCGW*SFSSVM
Trigger: CATCACTGACGAAAATGACAACCACCCGCACTTTTC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGAATTCGAACGCCTaGGTCTGCTCGTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSLNSNA*VCSWLK
Trigger: CTTTAACCACGAGCAGACCAAGGCGTTCGAATTCAA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGTTCTGACTTCGCCATaGACCTGGTCTATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHVLTSP*TWSISK
Trigger: CTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAAC...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGTTCACAGAGCCCATaGACTCTTGGGCATCGAGAG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESSQSP*TLGHRE
Trigger: CTCTCGATGCCCAAGAGTCAATGGGCTCTGTGAACT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATTTGTCTCGCTTGCACTaGATTGCCACGAAGATCATA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHLSRLH*IATKII
Trigger: TATGATCTTCGTGGCAATCAAGTGCAAGCGAGACAA...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTCTTTGTTGTCTCGCTaGCACTTGATTGCCACGAAG +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLSLLSR*HLIATK
Trigger: CTTCGTGGCAATCAAGTGCAAGCGAGACAACAAAGA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLSFRL*PSKSLK
Trigger: CTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAG...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATGCTCACTGTCAGTTaGGTCACTCTCCTCATGTCC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYMLTVS*VTLLMS
Trigger: GGACATGAGGAGAGTGACCAAACTGACAGTGAGCAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCCCATTGTTGACATTGTaGACATACTGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFPLLTL*TYCSRS
Trigger: TGATCTGGAGCAGTATGTCAACAATGTCAACAATGG...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACCAGGGGACTCTTTGTaGCGACCTTCCTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEPGDSL*RPSFRM
Trigger: CATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CAACATCAAAATGATCCCCAGAAAGTGGATTGGAATTCCAGCCAGAACTGCTATGTGTTGCTCATTCATTaGCTGTCTCAGTTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: QHQNDPQKVDWNSSQNCYVLLIH*LSQLFA
Trigger: TGCAAACAACTGAGACAGCAAATGAATGAGCAACAC...ATAGCAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGATCATTTTGATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAGGCAGGAAAAATACTTaGCAAAGTGGTGAGCAATCA +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKGRKNT*QSGEQS
Trigger: TGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCC...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAAGCCACACCAATATTTaGCATGAGGTAGTATTCAGC +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSHTNI*HEVVFS
Trigger: GCTGAATACTACCTCATGCAAAATATTGGTGTGGCT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAACTGCCCTTTGTCCTaGCTGCTTCAAGTGGACCAC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHENCPLS*LLQVDH
Trigger: GTGGTCCACTTGAAGCAGCAAGGACAAAGGGCAGTT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTAGTATGCACTTGTGCTTCTGAGAGGACTCATACATCAGACAATTGTGGGGAAGTCAGCAGATACAATTaGACTCATGAAATGACATCC +
Preference number: 5 (lower is better)
Translates to: LVCTCASERTHTSDNCGEVSRYN*THEMTS
Trigger: GGATGTCATTTCATGAGTCAAATTGTATCTGCTGAC...TTCCCCACAATTGTCTGATGTATGAGTCCTCTCAGAAGCACAAGTGCATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCCAAAGGGAAATTTAGGATCCTTGCTCAGAATGCCTATTTGCAGGTACAGCCTCCCCAAACATCCCCTTaGAATATTACTTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: AKGKFRILAQNAYLQVQPPQTSP*NITLLH
Trigger: ATGTAACAAAGTAATATTCAAAGGGGATGTTTGGGG...AGGCTGTACCTGCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCCCTTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTCAAGGTCATCTTGAATaGCCAACACAGCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSQGHLE*PTQLEQ
Trigger: TTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTTG...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCAAGGTCATCTTGAATaGCCAACACAGCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLQGHLE*PTQLEQ
Trigger: TTGCTCCAGCTGTGTTGGCAATTCAAGATGACCTTG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTAGTAACAAGGTCATCTaGAATTGCCAACACAGCTGG +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSSNKVI*NCQHSW
Trigger: CCAGCTGTGTTGGCAATTCAAGATGACCTTGTTACT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GCTGGTTTGTTTGCTAAGGTTGACAGCAACTTTCAGTTAGTAACAAGGTCATCTATGGTGTTAGCTGGTTaGTTTGCTAAGGTTGACAGC +
Preference number: 5 (lower is better)
Translates to: AGLFAKVDSNFQLVTRSSMVLAG*FAKVDS
Trigger: GCTGTCAACCTTAGCAAACAAACCAGCTAACACCAT...AGATGACCTTGTTACTAACTGAAAGTTGCTGTCAACCTTAGCAAACAAACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTCTGTCTTTTTGTCTaGCTCCTCGCTAATGGGAGA +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELCLFV*LLANGR
Trigger: TCTCCCATTAGCGAGGAGCAAGACAAAAAGACAGAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATCCACAAGCTCACTGTaGACTGACAGCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESTSSL*TDSRLM
Trigger: CATCAACCTGCTGTCAGTCAACAGTGAGCTTGTGGA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTTGAATTCGAACGCCTaGGTCTGCTCGTGGTTAAAG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLNSNA*VCSWLK
Trigger: CTTTAACCACGAGCAGACCAAGGCGTTCGAATTCAA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGTTGTCTCGCTTGCACTaGATTGCCACGAAGATCATA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLLSRLH*IATKII
Trigger: TATGATCTTCGTGGCAATCAAGTGCAAGCGAGACAA...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAACTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHELSFRL*PSKSLK
Trigger: CTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAG...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTAGTGTTCAGCACATCGTaGACAGCAGTATCACAATAC +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELVFSTS*TAVSQY
Trigger: GTATTGTGATACTGCTGTCAACGATGTGCTGAACAC...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGTGTTCAGCACATCGTaGACAGCAGTATCACAATAC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSVFSTS*TAVSQY
Trigger: GTATTGTGATACTGCTGTCAACGATGTGCTGAACAC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATCCATTGTTGACATTGTaGACATACTGCTCCAGATCA +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHPLLTL*TYCSRS
Trigger: TGATCTGGAGCAGTATGTCAACAATGTCAACAATGG...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAAGCAAAGTAGCGGCATaGGGAAGTACTCGAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESKVAA*GSTRAS
Trigger: TGAAGCTCGAGTACTTCCCAATGCCGCTACTTTGCT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAATCTATATGCATGGTGTaGCTCATTCATTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKSICMV*LIHLLS
Trigger: AGACAGCAAATGAATGAGCAACACCATGCATATAGA...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTATCCAAAATATACACTTaGTACTGCTTACTCTATCCC +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLSKIYT*YCLLYP
Trigger: GGGATAGAGTAAGCAGTACAAAGTGTATATTTTGGA...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATAGCCACACCAATATTTaGCATGAGGTAGTATTCAGC +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHSHTNI*HEVVFS
Trigger: GCTGAATACTACCTCATGCAAAATATTGGTGTGGCT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp ATCTTGAATTGCCAACACAGCTGGAGCAACAGTCAGCATCATCAGTTTTCCCTAATCAAGATGATACTCTaGAGTGGTTCCAATTTTCAG +
Preference number: 5 (lower is better)
Translates to: ILNCQHSWSNSQHHQFSLIKMIL*SGSNFQ
Trigger: CTGAAAATTGGAACCACTCAAGAGTATCATCTTGAT...TAGGGAAAACTGATGATGCTGACTGTTGCTCCAGCTGTGTTGGCAATTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATCCCCAGAAAGTGGATaGGAATTCCAGCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHESPESG*EFQPEL
Trigger: CAGTTCTGGCTGGAATTCCAATCCACTTTCTGGGGA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTAGTAACAAGGTCATCTaGAATTGCCAACACAGCTGG +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSSNKVI*NCQHSW
Trigger: CCAGCTGTGTTGGCAATTCAAGATGACCTTGTTACT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGGAGCTAGTCTGGCTCTaGGTCATTAAAGTCTGTATC +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLELVWL*VIKVCI
Trigger: GATACAGACTTTAATGACCAAGAGCCAGACTAGCTC...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGAGCTAGTCTGGCTCTaGGTCATTAAAGTCTGTATC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEELVWL*VIKVCI
Trigger: GATACAGACTTTAATGACCAAGAGCCAGACTAGCTC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGAGCACAAGGAGGTATTaGTTGCTGATTTCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQESTRRY*LLISSS
Trigger: CGAGCTAGAAATCAGCAACAAATACCTCCTTGTGCT...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACGTTCTGACTTCGCCATaGACCTGGTCTATTTCAAAG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYVLTSP*TWSISK
Trigger: CTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAAC...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTTGTCTCGCTTGCACTaGATTGCCACGAAGATCATA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYLSRLH*IATKII
Trigger: TATGATCTTCGTGGCAATCAAGTGCAAGCGAGACAA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTCAGAAACAACCTTTaGGGGGCTCAATTTCACATC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSFRNNL*GAQFHI
Trigger: GATGTGAAATTGAGCCCCCAAAAGGTTGTTTCTGAA...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGGCAGGAAAAATACTTaGCAAAGTGGTGAGCAATCA +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEGRKNT*QSGEQS
Trigger: TGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp GAGCAATTAAAACAAGAAGCTCCTGCTTCTTCACTAGCCAGTGTGGTTTCTTTCTCCAAAATATACACTTaGTACTGCTTACTCTATCCC +
Preference number: 5 (lower is better)
Translates to: EQLKQEAPASSLASVVSFSKIYT*YCLLYP
Trigger: GGGATAGAGTAAGCAGTACAAAGTGTATATTTTGGA...GAAAGAAACCACACTGGCTAGTGAAGAAGCAGGAGCTTCTTGTTTTAATTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAACTACAGCAAAAAGAGTaGGCTAAATCGAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKLQQKE*AKSKGF
Trigger: AAATCCTTTCGATTTAGCCAACTCTTTTTGCTGTAG...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGCTGAGAACAAAGTATTaGGATAGGGAAGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQELRTKY*DREEGW
Trigger: CCATCCTTCTTCCCTATCCAAATACTTTGTTCTCAG...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGGAAATTTAGGATCCTaGCTCAGAATGCCTATTTGC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSGNLGS*LRMPIC
Trigger: GCAAATAGGCATTCTGAGCAAGGATCCTAAATTTCC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGACCACTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATACCTTAGGTGCAATTTaGGATGAAGAAGTATACCTG +
Preference number: 5 (lower is better)
Translates to: RPLKGRKNTLQSGEQSLHTLGAI*DEEVYL
Trigger: CAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT...ATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAGTGGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATCAAGATGATACTCTaGAGTGGTTCCAATTTTCAG +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKIKMIL*SGSNFQ
Trigger: CTGAAAATTGGAACCACTCAAGAGTATCATCTTGAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AGCCAAGTGGACCAAACTTGTCAGAATGCTTTGGGGGAACATTCAACATCAAAAATCAAGATCAGGTGTTaGTGGGTTATTCTTTACCAA +
Preference number: 5 (lower is better)
Translates to: SQVDQTCQNALGEHSTSKIKIRC*WVILYQ
Trigger: TTGGTAAAGAATAACCCACAAACACCTGATCTTGAT...TTTTGATGTTGAATGTTCCCCCAAAGCATTCTGACAAGTTTGGTCCACTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATGGTGTTAGCTGGTTaGTTTGCTAAGGTTGACAGC +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYMVLAG*FAKVDS
Trigger: GCTGTCAACCTTAGCAAACAAACCAGCTAACACCAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGTGTTCAGCACATCGTaGACAGCAGTATCACAATAC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEVFSTS*TAVSQY
Trigger: GTATTGTGATACTGCTGTCAACGATGTGCTGAACAC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTATCTATATGCATGGTGTaGCTCATTCATTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELSICMV*LIHLLS
Trigger: AGACAGCAAATGAATGAGCAACACCATGCATATAGA...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACTACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYYLSGE*PKQLSL
Trigger: TAATGATAACTGCTTTGGCAATTCCCCAGACAGGTA...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTGTCAGCAGATACAATTaGACTCATGAAATGACATCC +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSVSRYN*THEMTS
Trigger: GGATGTCATTTCATGAGTCAAATTGTATCTGCTGAC...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACCAAGAGGTCAGCAGATACAATTaGACTCATGAAATGACATCC +
Preference number: 5 (lower is better)
Translates to: LQCFPIKIRCLWVILYQEVSRYN*THEMTS
Trigger: GGATGTCATTTCATGAGTCAAATTGTATCTGCTGAC...CTCTTGGTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAACAAGGAGGTATTTGTaGCTGATTTCTAGCTCGAGC +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHETRRYL*LISSSS
Trigger: GCTCGAGCTAGAAATCAGCAACAAATACCTCCTTGT...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACTACAGCAAAAAGAGTaGGCTAAATCGAAAGGATTT +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELLQQKE*AKSKGF
Trigger: AAATCCTTTCGATTTAGCCAACTCTTTTTGCTGTAG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAAGCTTCAGAGGGAAATTaGCAGCCACACCAATATTTT +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEASEGN*QPHQYF
Trigger: AAAATATTGGTGTGGCTGCAAATTTCCCTCTGAAGC...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AAGAACAACATCTCAATACACTTCAGTGTCAGCAGATACAATTTGACTCATGAATACCTGTCTGGGGAATaGCCAAAGCAGTTATCATTA +
Preference number: 5 (lower is better)
Translates to: KNNISIHFSVSRYNLTHEYLSGE*PKQLSL
Trigger: TAATGATAACTGCTTTGGCAATTCCCCAGACAGGTA...TTCATGAGTCAAATTGTATCTGCTGACACTGAAGTGTATTGAGATGTTGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACACCTTAGGTGCAATTTaGGATGAAGAAGTATACCTG +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYTLGAI*DEEVYL
Trigger: CAGGTATACTTCTTCATCCAAAATTGCACCTAAGGT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGCCCCAAACATCCCCTTaGAATATTACTTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLPQTSP*NITLLH
Trigger: ATGTAACAAAGTAATATTCAAAGGGGATGTTTGGGG...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp CTGAAAGGCAGGAAAAATACTTTGCAAAGTGGTGAGCAATCACTACATGAGTTACCCCAAACATCCCCTTaGAATATTACTTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: LKGRKNTLQSGEQSLHELPQTSP*NITLLH
Trigger: ATGTAACAAAGTAATATTCAAAGGGGATGTTTGGGG...TAACTCATGTAGTGATTGCTCACCACTTTGCAAAGTATTTTTCCTGCCTTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TCTTTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTATCAAGATCAGGTGTTaGTGGGTTATTCTTTACCAA +
Preference number: 5 (lower is better)
Translates to: SLPRAPSNLCIRQGGKFSIKIRC*WVILYQ
Trigger: TTGGTAAAGAATAACCCACAAACACCTGATCTTGAT...AGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp TTACCAAGAGCGCCTTCCAATCTATGTATCAGACAAGGTGGTAAATTTTCTTTGATCAAGATCAGGTGTTaGTGGGTTATTCTTTACCAA +
Preference number: 5 (lower is better)
Translates to: LPRAPSNLCIRQGGKFSLIKIRC*WVILYQ
Trigger: TTGGTAAAGAATAACCCACAAACACCTGATCTTGAT...CAAAGAAAATTTACCACCTTGTCTGATACATAGATTGGAAGGCGCTCTTGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS-3UTR CAA 90 bp AATGACCTACAATGCTTTCCAATCAAGATCAGGTGTTTGTGGGTTATTCTTTACATGCAATGCAGACACTaGCTGTTTTGTCCTTTTATA +
Preference number: 5 (lower is better)
Translates to: NDLQCFPIKIRCLWVILYMQCRH*LFCPFI
Trigger: TATAAAAGGACAAAACAGCAAGTGTCTGCATTGCAT...GTAAAGAATAACCCACAAACACCTGATCTTGATTGGAAAGCATTGTAGGTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp GGCGGGGCCGCCGCCGTGGGTACCGGGTGCTTCTCTTCTCTCCGTTaGGGCTGGGGTGTCGCTCCAAGGTCCGCCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: GGAAAVGTGCFSSLR*GWGVAPRSAAAAAA
Trigger: GGCGGCGGCGGCGGCGGCGGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GCCAGGCATGGTGCACGGGAGCTGTGCTGCCGTCTGTaGCCGCTCGTCCGTCTCCGCGCTGCGCCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: ARHGARELCCRL*PLVRLRAAPAA
Trigger: GGCGGCTGGCGCAGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp CCGCCGCCGCCGCCGCCGCCGCGGGAGGAAGCCCTCCTAGCTCAGTaGCACGTCGCTGGGGTCCGCCTCAGCAGCTGCCACAGTCGACGA +
Preference number: 6 (lower is better)
Translates to: PPPPPPPREEALLAQ*HVAGVRLSSCHSRR
Trigger: TCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGAGCTAGGAGGGCTTCCTCCCGCGGCGGCGGCGGCGGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp CCCGGGCAAGCCAGGCATGGTGCACGGGAGCTGTGCTaGCGTCTGTGCCCGCTCGTCCGTCTCCGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: PGQARHGARELC*RLCPLVRLRAA
Trigger: CGCAGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp CGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTaGGCCACGTTGGCAATCACCGTCCCGGCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RGSSAKPASRAS*ATLAITVPARC
Trigger: GCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp CCGCCGCCGCCGCGGGAGGAAGCCCTCCTAGCTCAGTaGCACGTCGCTGGGGTCCGCCTCAGCAGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: PPPPREEALLAQ*HVAGVRLSSCH
Trigger: GTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGAGCTAGGAGGGCTTCCTCCCGCGGCGGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GGAGCCGAGTTGGACACCACGCGAAAGGCTGAAGCCTaGCGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCG +
Preference number: 6 (lower is better)
Translates to: GAELDTTRKAEA*RGSSAKPASRA
Trigger: CGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTGTCCAACTCGGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp CCTCCCGGGCAAGCCAGGCATGGTGCACGGGAGCTGTaGTGCCGTCTGTGCCCGCTCGTCCGTCTCCGCGCT +
Preference number: 6 (lower is better)
Translates to: PPGQARHGAREL*CRLCPLVRLRA
Trigger: AGCGCGGAGACGGACGAGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GGCGCAGCCTTTCAGGCACTGCCCGGCCCGCCGCGGTaGACCGGCACTGAGGCTGGCGAACTCGCTGTCTGT +
Preference number: 6 (lower is better)
Translates to: GAAFQALPGPPR*TGTEAGELAVC
Trigger: ACAGACAGCGAGTTCGCCAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GTAAAGAGGGCGGAGGAGGCGCAGCCTTTCAGGCACTaGCCGGCCCGCCGCGGTGCACCGGCACTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: VKRAEEAQPFRH*PARRGAPALRL
Trigger: CAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGAAAGGCTGCGCCTCCTCCGCCCTCTTTAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp CGGCAGCAGGAGCGACTCCATGGCTGCACGGGGCTCTaGCTGGCCTCGCCTCTCCACACCCCTCCGAGACCG +
Preference number: 6 (lower is better)
Translates to: RQQERLHGCTGL*LASPLHTPPRP
Trigger: CGGTCTCGGAGGGGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp GGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTTaGCCACGTTGGCAATCACCGTCCCGGCGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: GGPARSPPLARL*PRWQSPSRRAA
Trigger: AGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GACGCGGGTGCCAGTGCCTCCCGGGCAAGCCAGGCATaGTGCACGGGAGCTGTGCTGCCGTCTGTGCCCGCT +
Preference number: 6 (lower is better)
Translates to: DAGASASRASQA*CTGAVLPSVPA
Trigger: AGCGGGCACAGACGGCAGCACAGCTCCCGTGCACCATGCCTGGCTTGCCCGGGAGGCACTGGCACCCGCGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 72 bp TCAGGCACTGCCCGGCCCGCCGCGGTGCACCGGCACTaGGGCTGGCGAACTCGCTGTCTGTGCACCTGGCAT +
Preference number: 6 (lower is better)
Translates to: SGTARPAAVHRH*GWRTRCLCTWH
Trigger: ATGCCAGGTGCACAGACAGCGAGTTCGCCAGCCTCAGTGCCGGTGCACCGCGGCGGGCCGGGCAGTGCCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GCCAGGAGAGGCGGGGCCGCCGCCGTGGGTACCGGGTaGTTCTCTTCTCTCCGTTTGGGCTGGGGTGTCGCT +
Preference number: 6 (lower is better)
Translates to: ARRGGAAAVGTG*FSSLRLGWGVA
Trigger: AGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGCCTCTCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp CAGCAGCAGCACCGGCAGCAGGAGCGACTCCATGGCTaGACGGGGCTCTGCCTGGCCTCGCCTCTCCACACC +
Preference number: 6 (lower is better)
Translates to: QQQHRQQERLHG*TGLCLASPLHT
Trigger: GGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGCTGCCGGTGCTGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp GTGGGTACCGGGTGCTTCTCTTCTCTCCGTTTGGGCTaGGGTGTCGCTCCAAGGTCCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: VGTGCFSSLRLG*GVAPRSAAAAA
Trigger: GGCGGCGGCGGCGGCGGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp CCGCCGTGGGTACCGGGTGCTTCTCTTCTCTCCGTTTaGGCTGGGGTGTCGCTCCAAGGTCCGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PPWVPGASLLSV*AGVSLQGPPPP
Trigger: CGGCGGCGGCGGACCTTGGAGCGACACCCCAGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp AGCAGGAGCGACTCCATGGCTGCACGGGGCTCTGCCTaGCCTCGCCTCTCCACACCCCTCCGAGACCGACGC +
Preference number: 6 (lower is better)
Translates to: SRSDSMAARGSA*PRLSTPLRDRR
Trigger: GCGTCGGTCTCGGAGGGGTGTGGAGAGGCGAGGCCAGGCAGAGCCCCGTGCAGCCATGGAGTCGCTCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp GCGCGCTCCCTCGCGCTAAGGCTGGCTTCGAAGGGCTaGGGGGCGCGTCTGTCCAGGATCCGAGGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: ARSLALRLASKG*GARLSRIRGGS
Trigger: GCTCCCACCTCGGATCCTGGACAGACGCGCCCCCAAGCCCTTCGAAGCCAGCCTTAGCGCGAGGGAGCGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp GAAGCCTGCCGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTaGGCCACGTTGGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: EACRGSSAKPASRAS*ATLAITVPARCSSS
Trigger: AGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCGGCAGGCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp CGGGGGTCCAGCGCGAAGCCCGCCTCTCGCGCGTCTTTGGCCACGTaGGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCTACCGAGTAC +
Preference number: 6 (lower is better)
Translates to: RGSSAKPASRASLAT*AITVPARCSSSTEY
Trigger: GTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCTGGACCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp CGGGAGTCAGTTACTGGCAAGCGCCGCGGGCACCCGGTTATAGGGTaGAGTCGGATGGCGGTCCCGGGGCCAGCAGAGGAAGGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: RESVTGKRRGHPVIG*SRMAVPGPAEEGGG
Trigger: CCCTCCCCCTTCCTCTGCTGGCCCCGGGACCGCCATCCGACTCAACCCTATAACCGGGTGCCCGCGGCGCTTGCCAGTAACTGACTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp AGCGCTGTCCAGCGGGATGCGCGTGCCAGGGCTGGCTaGCTCCGAGATCTCCAGCTCGATCTGTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: SAVQRDARARAG*LRDLQLDLCCR
Trigger: CCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp CTTGATTTCATCTTCCCGGAGAGGCGCTGGCCGCGCTaGGTTGGGCTCCCTTCCTCCCGGGCGCTCGCGCAC +
Preference number: 6 (lower is better)
Translates to: LDFIFPERRWPR*VGLPSSRALAH
Trigger: GTGCGCGAGCGCCCGGGAGGAAGGGAGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 72 bp TGCCCAGGCGCGGCGGGTCGCCACCGTCTAGCGCAGTaGTTCGGAAGCTGTAGTGCGACTGCGTCTCGCGGT +
Preference number: 6 (lower is better)
Translates to: CPGAAGRHRLAQ*FGSCSATASRG
Trigger: ACCGCGAGACGCAGTCGCACTACAGCTTCCGAATCACTGCGCTAGACGGTGGCGACCCGCCGCGCCTGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GCGCGAAGCCCGCCTCTCGCGCGTCTTTGGCCACGTTaGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: ARSPPLARLWPR*QSPSRRAAPLL
Trigger: TAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp CAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGCGCTaGCCGCGCTGCGTTGGGCTCCCTTCCTCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: QERLDFIFPERR*PRCVGLPSSRA
Trigger: CGCCCGGGAGGAAGGGAGCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp CAACAGTACCGGCCAGGAGAGGCGGGGCCGCCGCCGTaGGTACCGGGTGCTTCTCTTCTCTCCGTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: QQYRPGEAGPPP*VPGASLLSVWA
Trigger: AGCCCAAACGGAGAGAAGAGAAGCACCCGGTACCCACGGCGGCGGCCCCGCCTCTCCTGGCCGGTACTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp AGCGCGAAGCCCGCCTCTCGCGCGTCTTTGGCCACGTaGGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SAKPASRASLAT*AITVPARCSSS
Trigger: AGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGACGCGCGAGAGGCGGGCTTCGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GGCCTGGAGGACGCACCGCTGAGTCCGGACAGTACTTaGGGCGAAGGTAAAGAGGGCGGAGGAGGCGCAGCC +
Preference number: 6 (lower is better)
Translates to: GLEDAPLSPDST*GEGKEGGGGAA
Trigger: GGCTGCGCCTCCTCCGCCCTCTTTACCTTCGCCTCAAGTACTGTCCGGACTCAGCGGTGCGTCCTCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp CGTAAGCGCTGTCCAGCGGGATGCGCGTGCCAGGGCTaGCTGCCTCCGAGATCTCCAGCTCGATCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: RKRCPAGCACQG*LPPRSPARSVL
Trigger: CAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ACGAGTTCGGCAAAGCGGGAGCCGTCGCCGCGCGTCTaGATCTCCAGGCCGAACAGCTCGTTGGGCGTGAGC +
Preference number: 6 (lower is better)
Translates to: TSSAKREPSPRV*ISRPNSSLGVS
Trigger: GCTCACGCCCAACGAGCTGTTCGGCCTGGAGATCAAGACGCGCGGCGACGGCTCCCGCTTTGCCGAACTCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GTTACTGGCAAGCGCCGCGGGCACCCGGTTATAGGGTaGAGTCGGATGGCGGTCCCGGGGCCAGCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: VTGKRRGHPVIG*SRMAVPGPAEE
Trigger: TTCCTCTGCTGGCCCCGGGACCGCCATCCGACTCAACCCTATAACCGGGTGCCCGCGGCGCTTGCCAGTAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp AGTCTGGATCGTAAGCGCTGTCCAGCGGGATGCGCGTaGCAGGGCTGGCTGCCTCCGAGATCTCCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: SLDRKRCPAGCA*QGWLPPRSPAR
Trigger: TCGAGCTGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp AGCAGGCCAGAGCTGGGATTGATGTCCACTAGGTGTGGAGCCGAGTaGGACACCACGCGAAAGGCTGAAGCCTGCCGGGGGTCCAGCGCG +
Preference number: 6 (lower is better)
Translates to: SRPELGLMSTRCGAE*DTTRKAEACRGSSA
Trigger: CGCGCTGGACCCCCGGCAGGCTTCAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCTAGTGGACATCAATCCCAGCTCTGGCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GCACTCTGCAGCATGGGCACGCCGCCGTCGCGTGCCTaGATTGTGAGGTTGTATTGGTCGTGCTGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: ALCSMGTPPSRA*IVRLYWSCCSR
Trigger: CCGCGAGCAGCACGACCAATACAACCTCACAATTCAGGCACGCGACGGCGGCGTGCCCATGCTGCAGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp TTCCTGAGTCTGGATCGTAAGCGCTGTCCAGCGGGATaGGCGTGCCAGGGCTGGCTGCCTCCGAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: FLSLDRKRCPAG*ACQGWLPPRSP
Trigger: TGGAGATCTCGGAGGCAGCCAGCCCTGGCACGCGCATCCCGCTGGACAGCGCTTACGATCCAGACTCAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp ACGTCGAGGATGATGACCCGCACCGTAGCGTTGCTTTaGAGTGAGGGAAGGCCGCCGTCCTTGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: TSRMMTRTVALL*SEGRPPSLAST
Trigger: GGTGCTGGCCAAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGTCATCATCCTCGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GGGAGAAAGGGGGTGTCGCAGACGGGAGTCAGTTACTaGCAAGCGCCGCGGGCACCCGGTTATAGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: GRKGVSQTGVSY*QAPRAPGYRVE
Trigger: CTCAACCCTATAACCGGGTGCCCGCGGCGCTTGCCAGTAACTGACTCCCGTCTGCGACACCCCCTTTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp GTGGACTCGCTAAACACCGGGTTGTTGTCATTGGAGTCGGTCACCTaGATACTAAGGCCAACGGTGCCCAGGCGCGGCGGGTCGCCACCG +
Preference number: 6 (lower is better)
Translates to: VDSLNTGLLSLESVT*ILRPTVPRRGGSPP
Trigger: CGGTGGCGACCCGCCGCGCCTGGGCACCGTTGGCCTTAGTATCAAGGTGACCGACTCCAATGACAACAACCCGGTGTTTAGCGAGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp GGGGTGTTGTCGTTGACGTCGAGGATGATGACCCGCACCGTAGCGTaGCTTTGCAGTGAGGGAAGGCCGCCGTCCTTGGCCAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: GVLSLTSRMMTRTVA*LCSEGRPPSLASTL
Trigger: CAAGGTGCTGGCCAAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGTCATCATCCTCGACGTCAACGACAACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GCCCAGCAAACGGCACTGCACACGTCCATTGAGGCCTaGGTCGCGATCAGACACCCGCACCAAGGCGATCAC +
Preference number: 6 (lower is better)
Translates to: AQQTALHTSIEA*VAIRHPHQGDH
Trigger: GTGATCGCCTTGGTGCGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp AGGGCTGGCTGCCTCCGAGATCTCCAGCTCGATCTGTaGTGCCGGGAAACTGGGCGCATTGTCGTTCAGGTC +
Preference number: 6 (lower is better)
Translates to: RAGCLRDLQLDL*CRETGRIVVQV
Trigger: GACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp TTTAGGATTTCGGATGAAATCGCTCAGCCGGAATGCTaGGGAGCGCAACGCGCCAAGGGCCAGCGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: FRISDEIAQPEC*GAQRAKGQRRA
Trigger: AGCCCGGCGCTGGCCCTTGGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGCGATTTCATCCGAAATCCTAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp AGGTTTAGGATTTCGGATGAAATCGCTCAGCCGGAATaGTGCGGAGCGCAACGCGCCAAGGGCCAGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RFRISDEIAQPE*CGAQRAKGQRR
Trigger: CCGGCGCTGGCCCTTGGCGCGTTGCGCTCCGCAGCATTCCGGCTGAGCGATTTCATCCGAAATCCTAAACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp GAGCTGGGATTGATGTCCACTAGGTGTGGAGCCGAGTaGGACACCACGCGAAAGGCTGAAGCCTGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: ELGLMSTRCGAE*DTTRKAEACRG
Trigger: CCCCCGGCAGGCTTCAGCCTTTCGCGTGGTGTCCAACTCGGCTCCACACCTAGTGGACATCAATCCCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TCGTTGACGTCGAGGATGATGACCCGCACCGTAGCGTaGCTTTGCAGTGAGGGAAGGCCGCCGTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SLTSRMMTRTVA*LCSEGRPPSLA
Trigger: GGCCAAGGACGGCGGCCTTCCCTCACTGCAAAGCAACGCTACGGTGCGGGTCATCATCCTCGACGTCAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GGGCGTGAGCTCGTAAGTCTGCACGCCAAAGCTTCCTaGGTCTGGATCGTAAGCGCTGTCCAGCGGGATGCG +
Preference number: 6 (lower is better)
Translates to: GRELVSLHAKAS*VWIVSAVQRDA
Trigger: CGCATCCCGCTGGACAGCGCTTACGATCCAGACTCAGGAAGCTTTGGCGTGCAGACTTACGAGCTCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GCGGGTCGATCTGAAAGAGCTCGCGCGTGCGGTCGTTaGCGTAGCCATAGAAGGAGTAGACCACCTGGCCGT +
Preference number: 6 (lower is better)
Translates to: AGRSERARACGR*RSHRRSRPPGR
Trigger: ACGGCCAGGTGGTCTACTCCTTCTATGGCTACGTCAACGACCGCACGCGCGAGCTCTTTCAGATCGACCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp GCTGGCTGCCTCCGAGATCTCCAGCTCGATCTGTGCTaGCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: AGCLRDLQLDLC*RETGRIVVQVL
Trigger: AAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGAGGCAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp CTTGGCACTCTGCAGCATGGGCACGCCGCCGTCGCGTaGCTGAATTGTGAGGTTGTATTGGTCGTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LGTLQHGHAAVA*LNCEVVLVVLL
Trigger: GAGCAGCACGACCAATACAACCTCACAATTCAGGCACGCGACGGCGGCGTGCCCATGCTGCAGAGTGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp GGAGGTGACAGGGCTAATCGCCTCACAGCCATTGCCTaGCTCCCGGATAACGCTGTTGACCTTGGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: GGDRANRLTAIA*LPDNAVDLGAA
Trigger: TGCAGCCCCAAGGTCAACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGATTAGCCCTGTCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp GCTCAGTTGCACGTCGCTGGGGTCCGCCTCAGCAGCTaGCACAGTCGACGATTTTGTCGCCGCCGAAGTTTA +
Preference number: 6 (lower is better)
Translates to: AQLHVAGVRLSS*HSRRFCRRRSL
Trigger: TAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGCAACTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp GAGGCGGATGACGGGTGTGTTGGGAGGCGAGTTTTCTaGCACGCTCACCGCGTAGGTGGACTCGCTAAACAC +
Preference number: 6 (lower is better)
Translates to: EADDGCVGRRVF*HAHRVGGLAKH
Trigger: GTGTTTAGCGAGTCCACCTACGCGGTGAGCGTGCCAGAAAACTCGCCTCCCAACACACCCGTCATCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ACCGTCCCGGCGCGCTGCTCCTCTTCTACCGAGTACTaGAGATTAATGAGGGCGGCAGCCTGCGTCCACAGT +
Preference number: 6 (lower is better)
Translates to: TVPARCSSSTEY*RLMRAAACVHS
Trigger: ACTGTGGACGCAGGCTGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GGCACATTGCCCAGCAAACGGCACTGCACACGTCCATaGAGGCCTGAGTCGCGATCAGACACCCGCACCAAG +
Preference number: 6 (lower is better)
Translates to: GTLPSKRHCTRP*RPESRSDTRTK
Trigger: CTTGGTGCGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ACCTTGGGGCTGCAGATGGTCACATCGACAGTCCTCTaGCCTTTCAGGGTAGGCCTCTCCTCAGCCGGGTGG +
Preference number: 6 (lower is better)
Translates to: TLGLQMVTSTVL*PFRVGLSSAGW
Trigger: CCACCCGGCTGAGGAGAGGCCTACCCTGAAAGGCAAGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TTGGCAATCACCGTCCCGGCGCGCTGCTCCTCTTCTACCGAGTACTaGAGATTAATGAGGGCGGCAGCCTGCGTCCACAGTATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LAITVPARCSSSTEY*RLMRAAACVHSMAS
Trigger: GCTGGCCATACTGTGGACGCAGGCTGCCGCCCTCATTAATCTCAAGTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp AGTCGAAAGGGCACATTGCCCAGCAAACGGCACTGCACACGTCCATaGAGGCCTGAGTCGCGATCAGACACCCGCACCAAGGCGATCACG +
Preference number: 6 (lower is better)
Translates to: SRKGTLPSKRHCTRP*RPESRSDTRTKAIT
Trigger: CGTGATCGCCTTGGTGCGGGTGTCTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp ACGCTGTTGACCTTGGGGCTGCAGATGGTCACATCGACAGTCCTCTaGCCTTTCAGGGTAGGCCTCTCCTCAGCCGGGTGGTCGCTGACA +
Preference number: 6 (lower is better)
Translates to: TLLTLGLQMVTSTVL*PFRVGLSSAGWSLT
Trigger: TGTCAGCGACCACCCGGCTGAGGAGAGGCCTACCCTGAAAGGCAAGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGGTCAACAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp CAGTCGACGATTTTGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTaGATTTCATCTTCCCGGAGAGGCGCTGGCCGCGCTGCGTTGGGC +
Preference number: 6 (lower is better)
Translates to: QSTILSPPKFTCRSV*ISSSRRGAGRAALG
Trigger: GCCCAACGCAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp ATTGGTGTCCAGCACGCTGACGGTGACCTTGCAGTGTaGCGGGATGGAATTGGGCCCCAAGTCCTTAGCCTG +
Preference number: 6 (lower is better)
Translates to: IGVQHADGDLAV*RDGIGPQVLSL
Trigger: CAGGCTAAGGACTTGGGGCCCAATTCCATCCCGGCACACTGCAAGGTCACCGTCAGCGTGCTGGACACCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp TGTTGCGGGTATTCTGGTTCTCCACATTCAGGAAAGTaGTCTCAGAGCGGCGGCAGCCCAGGGGCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: CCGYSGSPHSGK*SQSGGSPGAAS
Trigger: AGACGCTGCCCCTGGGCTGCCGCCGCTCTGAGAGCACTTTCCTGAATGTGGAGAACCAGAATACCCGCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ATCAGAGGTGGGGCTGTGATGACCGGGGTGTTGTCGTaGACGTCGAGGATGATGACCCGCACCGTAGCGTTG +
Preference number: 6 (lower is better)
Translates to: IRGGAVMTGVLS*TSRMMTRTVAL
Trigger: CAACGCTACGGTGCGGGTCATCATCCTCGACGTCAACGACAACACCCCGGTCATCACAGCCCCACCTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp CTCTCCCCGAAGGTGCGGGTGGTTCTGACTTCGCCATaGACCTGGTCTATTTCAAAGAAGCCGCGGTCGCCC +
Preference number: 6 (lower is better)
Translates to: LSPKVRVVLTSP*TWSISKKPRSP
Trigger: GGGCGACCGCGGCTTCTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAACCACCCGCACCTTCGGGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GCCTCACAGCCATTGCCTGCCTCCCGGATAACGCTGTaGACCTTGGGGCTGCAGATGGTCACATCGACAGTC +
Preference number: 6 (lower is better)
Translates to: ASQPLPASRITL*TLGLQMVTSTV
Trigger: GACTGTCGATGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TGGGGTCCGCCTCAGCAGCTGCCACAGTCGACGATTTaGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: WGPPQQLPQSTI*SPPKFTCRSVL
Trigger: CAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp TCGGCAGTGCCGTTAATCAGAGGTGGGGCTGTGATGACCGGGGTGTaGTCGTTGACGTCGAGGATGATGACCCGCACCGTAGCGTTGCTT +
Preference number: 6 (lower is better)
Translates to: SAVPLIRGGAVMTGV*SLTSRMMTRTVALL
Trigger: AAGCAACGCTACGGTGCGGGTCATCATCCTCGACGTCAACGACAACACCCCGGTCATCACAGCCCCACCTCTGATTAACGGCACTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp GACTTGGAGCTCTCCCCGAAGGTGCGGGTGGTTCTGACTTCGCCATaGACCTGGTCTATTTCAAAGAAGCCGCGGTCGCCCTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: DLELSPKVRVVLTSP*TWSISKKPRSPSVM
Trigger: CATGACCGAGGGCGACCGCGGCTTCTTTGAAATAGACCAGGTCAATGGCGAAGTCAGAACCACCCGCACCTTCGGGGAGAGCTCCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp GGGCTAATCGCCTCACAGCCATTGCCTGCCTCCCGGATAACGCTGTaGACCTTGGGGCTGCAGATGGTCACATCGACAGTCCTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GLIASQPLPASRITL*TLGLQMVTSTVLLP
Trigger: AGGCAAGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGATTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp CACTTGGGGCTCTGGCGGCACAGCAGATCACGGTCAATCTTCTGCTaGGTGACCAGCAGGCCAGAGCTGGGATTGATGTCCACTAGGTGT +
Preference number: 6 (lower is better)
Translates to: HLGLWRHSRSRSIFC*VTSRPELGLMSTRC
Trigger: ACACCTAGTGGACATCAATCCCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTGACCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp AGCTCACTGTTGACTGACAGCAGGTTGATGACCGGCGGATTGTCATaGGTGTCCAGCACGCTGACGGTGACCTTGCAGTGTGCCGGGATG +
Preference number: 6 (lower is better)
Translates to: SSLLTDSRLMTGGLS*VSSTLTVTLQCAGM
Trigger: CATCCCGGCACACTGCAAGGTCACCGTCAGCGTGCTGGACACCAATGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp GTGCCGTTAATCAGAGGTGGGGCTGTGATGACCGGGGTGTTGTCGTaGACGTCGAGGATGATGACCCGCACCGTAGCGTTGCTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: VPLIRGGAVMTGVLS*TSRMMTRTVALLCS
Trigger: ACTGCAAAGCAACGCTACGGTGCGGGTCATCATCCTCGACGTCAACGACAACACCCCGGTCATCACAGCCCCACCTCTGATTAACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp ATCGCCTCACAGCCATTGCCTGCCTCCCGGATAACGCTGTTGACCTaGGGGCTGCAGATGGTCACATCGACAGTCCTCTTGCCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: IASQPLPASRITLLT*GLQMVTSTVLLPFR
Trigger: CCTGAAAGGCAAGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGAGGCAGGCAATGGCTGTGAGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TCAGCAGCTGCCACAGTCGACGATTTTGTCGCCGCCGAAGTTTACTaGCAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGCGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: SAAATVDDFVAAEVY*QERLDFIFPERRWP
Trigger: CGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp GCACGTCGCTGGGGTCCGCCTCAGCAGCTGCCACAGTCGACGATTTaGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTTGATTTCATCT +
Preference number: 6 (lower is better)
Translates to: ARRWGPPQQLPQSTI*SPPKFTCRSVLISS
Trigger: AGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGCAGCTGCTGAGGCGGACCCCAGCGACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS TCA 72 bp CAAAGAAGCCGCGGTCGCCCTCGGTCATGTCGTAGGTaGCTCGGCCATTTTCGCCCTCATCGTAGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: QRSRGRPRSCRR*LGHFRPHRSLL
Trigger: CAGAAGACTACGATGAGGGCGAAAATGGCCGAGTCACCTACGACATGACCGAGGGCGACCGCGGCTTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp TTTTGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTTaGTTTCATCTTCCCGGAGAGGCGCTGGCCGCGCTG +
Preference number: 6 (lower is better)
Translates to: FCRRRSLLAGAS*FHLPGEALAAL
Trigger: CAGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp TGCAGTCGAAAGGGCACATTGCCCAGCAAACGGCACTaGACACGTCCATTGAGGCCTGAGTCGCGATCAGAC +
Preference number: 6 (lower is better)
Translates to: CSRKGTLPSKRH*TRPLRPESRSD
Trigger: GTCTGATCGCGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp CTCAGCCGGGTGGTCGCTGACATCTTTCCCAAAGGTTaGGAAAGTCCGTTTGGTGGGGCCGCAGTCGTCATA +
Preference number: 6 (lower is better)
Translates to: LSRVVADIFPKG*ESPFGGAAVVI
Trigger: TATGACGACTGCGGCCCCACCAAACGGACTTTCGCAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp CCGTTAATCAGAGGTGGGGCTGTGATGACCGGGGTGTaGTCGTTGACGTCGAGGATGATGACCCGCACCGTA +
Preference number: 6 (lower is better)
Translates to: PLIRGGAVMTGV*SLTSRMMTRTV
Trigger: TACGGTGCGGGTCATCATCCTCGACGTCAACGACAACACCCCGGTCATCACAGCCCCACCTCTGATTAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GAGGAGGTCAGGGAAGAGCAACTGACAACGTTCATCTaGTCTGTCTCCTCCACATCCCGGGGTACCAGGCGG +
Preference number: 6 (lower is better)
Translates to: EEVREEQLTTFI*SVSSTSRGTRR
Trigger: CCGCCTGGTACCCCGGGATGTGGAGGAGACAGACAAGATGAACGTTGTCAGTTGCTCTTCCCTGACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp CAGCCATTGCCTGCCTCCCGGATAACGCTGTTGACCTaGGGGCTGCAGATGGTCACATCGACAGTCCTCTTG +
Preference number: 6 (lower is better)
Translates to: QPLPASRITLLT*GLQMVTSTVLL
Trigger: CAAGAGGACTGTCGATGTGACCATCTGCAGCCCCAAGGTCAACAGCGTTATCCGGGAGGCAGGCAATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TCACGGTCAATCTTCTGCTTGGTGACCAGCAGGCCAGAGCTGGGATaGATGTCCACTAGGTGTGGAGCCGAGTTGGACACCACGCGAAAG +
Preference number: 6 (lower is better)
Translates to: SRSIFCLVTSRPELG*MSTRCGAELDTTRK
Trigger: CTTTCGCGTGGTGTCCAACTCGGCTCCACACCTAGTGGACATCAATCCCAGCTCTGGCCTGCTGGTCACCAAGCAGAAGATTGACCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TCCACAAGCTCACTGTTGACTGACAGCAGGTTGATGACCGGCGGATaGTCATTGGTGTCCAGCACGCTGACGGTGACCTTGCAGTGTGCC +
Preference number: 6 (lower is better)
Translates to: STSSLLTDSRLMTGG*SLVSSTLTVTLQCA
Trigger: GGCACACTGCAAGGTCACCGTCAGCGTGCTGGACACCAATGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCTTGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GGCGCTCTCGCTGACCTCCACAAGCTCACTGTTGACTaGCAGCAGGTTGATGACCGGCGGATTGTCATTGGT +
Preference number: 6 (lower is better)
Translates to: GALADLHKLTVD*QQVDDRRIVIG
Trigger: ACCAATGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAACAGTGAGCTTGTGGAGGTCAGCGAGAGCGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp GTGAGTGTGTGGTGTGGGGAGTGTGAGTGTGGAGTATaGGCAAGCAGGAGGCAATGGGTTTGGGGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: VSVWCGECECGV*ASRRQWVWGRR
Trigger: CCTCCTACCCCAAACCCATTGCCTCCTGCTTGCTCATACTCCACACTCACACTCCCCACACCACACACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp GGACGAGTAGGGCCATTGTTGACATTGTTGACATACTaGTCCAGATCACGGGCTGGGGGAGCCAGGGCAATG +
Preference number: 6 (lower is better)
Translates to: GRVGPLLTLLTY*SRSRAGGARAM
Trigger: CATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGTCAACAATGGCCCTACTCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GACATGACCTCGAGCGAGATGATGCACTTGGGGCTCTaGCGGCACAGCAGATCACGGTCAATCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: DMTSSEMMHLGL*RHSRSRSIFCL
Trigger: CAAGCAGAAGATTGACCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCTCGAGGTCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp CTCTTGCCTTTCAGGGTAGGCCTCTCCTCAGCCGGGTaGTCGCTGACATCTTTCCCAAAGGTTGCGAAAGTC +
Preference number: 6 (lower is better)
Translates to: LLPFRVGLSSAG*SLTSFPKVAKV
Trigger: GACTTTCGCAACCTTTGGGAAAGATGTCAGCGACCACCCGGCTGAGGAGAGGCCTACCCTGAAAGGCAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ATTGAGCTGGACATGACCTCGAGCGAGATGATGCACTaGGGGCTCTGGCGGCACAGCAGATCACGGTCAATC +
Preference number: 6 (lower is better)
Translates to: IELDMTSSEMMH*GLWRHSRSRSI
Trigger: GATTGACCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCTCGAGGTCATGTCCAGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TTGTCATTTTCGTCAGTGATGAGCACGGTAAAGGACTaGGCACTCTGCAGCATGGGCACGCCGCCGTCGCGT +
Preference number: 6 (lower is better)
Translates to: LSFSSVMSTVKD*ALCSMGTPPSR
Trigger: ACGCGACGGCGGCGTGCCCATGCTGCAGAGTGCCAAGTCCTTTACCGTGCTCATCACTGACGAAAATGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ATTTTGTCGCCGCCGAAGTTTACTTGCAGGAGCGTCTaGATTTCATCTTCCCGGAGAGGCGCTGGCCGCGCT +
Preference number: 6 (lower is better)
Translates to: ILSPPKFTCRSV*ISSSRRGAGRA
Trigger: AGCGCGGCCAGCGCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS GCA 72 bp TCTTTGGCCACGTTGGCAATCACCGTCCCGGCGCGCTaGTCCTCTTCTACCGAGTACTTGAGATTAATGAGG +
Preference number: 6 (lower is better)
Translates to: SLATLAITVPAR*SSSTEYLRLMR
Trigger: CCTCATTAATCTCAAGTACTCGGTAGAAGAGGAGCAGCGCGCCGGGACGGTGATTGCCAACGTGGCCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GTTGACATTGTTGACATACTGCTCCAGATCACGGGCTaGGGGAGCCAGGGCAATGGTGTAAGACACGGAAGG +
Preference number: 6 (lower is better)
Translates to: VDIVDILLQITG*GSQGNGVRHGR
Trigger: CCTTCCGTGTCTTACACCATTGCCCTGGCTCCCCCAGCCCGTGATCTGGAGCAGTATGTCAACAATGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TCCAGCTCGATCTGTGCTGCCGGGAAACTGGGCGCATaGTCGTTCAGGTCCTTGATCTCCACCTTTATCACG +
Preference number: 6 (lower is better)
Translates to: SSSICAAGKLGA*SFRSLISTFIT
Trigger: CGTGATAAAGGTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TCACTGTTGACTGACAGCAGGTTGATGACCGGCGGATaGTCATTGGTGTCCAGCACGCTGACGGTGACCTTG +
Preference number: 6 (lower is better)
Translates to: SLLTDSRLMTGG*SLVSSTLTVTL
Trigger: CAAGGTCACCGTCAGCGTGCTGGACACCAATGACAATCCGCCGGTCATCAACCTGCTGTCAGTCAACAGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp CAGATTTCCATTGAGCTGGACATGACCTCGAGCGAGATGATGCACTaGGGGCTCTGGCGGCACAGCAGATCACGGTCAATCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: QISIELDMTSSEMMH*GLWRHSRSRSIFCL
Trigger: CAAGCAGAAGATTGACCGTGATCTGCTGTGCCGCCAGAGCCCCAAGTGCATCATCTCGCTCGAGGTCATGTCCAGCTCAATGGAAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TCCGAGATCTCCAGCTCGATCTGTGCTGCCGGGAAACTGGGCGCATaGTCGTTCAGGTCCTTGATCTCCACCTTTATCACGCAGATTTCC +
Preference number: 6 (lower is better)
Translates to: SEISSSICAAGKLGA*SFRSLISTFITQIS
Trigger: GGAAATCTGCGTGATAAAGGTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGAGCTGGAGATCTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp GGTGACTCGGCCATTTTCGCCCTCATCGTAGTCTTCTaGCTTGACAACAGTCACCAGGTAGCCTATGCCAGA +
Preference number: 6 (lower is better)
Translates to: GDSAIFALIVVF*LDNSHQVAYAR
Trigger: TCTGGCATAGGCTACCTGGTGACTGTTGTCAAGGCAGAAGACTACGATGAGGGCGAAAATGGCCGAGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp GTAGCTTCAATAGACAGCGCGATGATGTTCCTCACATaGTCAGGGGACTTGGAACGGATGGGCATGGGGTTC +
Preference number: 6 (lower is better)
Translates to: VASIDSAMMFLT*SGDLERMGMGF
Trigger: GAACCCCATGCCCATCCGTTCCAAGTCCCCTGAGCATGTGAGGAACATCATCGCGCTGTCTATTGAAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp TTGTTGCGACCTTCCTTCAGAATGGGGCTGACCTCATaGATGACTTTCTCGCTATCAGCTCCACGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: LLRPSFRMGLTS*MTFSLSAPRGS
Trigger: TGAGCCCCGTGGAGCTGATAGCGAGAAAGTCATGCATGAGGTCAGCCCCATTCTGAAGGAAGGTCGCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS GCA 72 bp CCACAGTCGACGATTTTGTCGCCGCCGAAGTTTACTTaGAGGAGCGTCTTGATTTCATCTTCCCGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PQSTILSPPKFT*RSVLISSSRRG
Trigger: GCCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp GAGAAGCTCTCATATTCCTGCAGTCGAAAGGGCACATaGCCCAGCAAACGGCACTGCACACGTCCATTGAGG +
Preference number: 6 (lower is better)
Translates to: EKLSYSCSRKGT*PSKRHCTRPLR
Trigger: CCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACTGCAGGAATATGAGAGCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GCCACAGTCGACGATTTTGTCGCCGCCGAAGTTTACTaGCAGGAGCGTCTTGATTTCATCTTCCCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: ATVDDFVAAEVY*QERLDFIFPER
Trigger: CCTCTCCGGGAAGATGAAATCAAGACGCTCCTGCAAGTAAACTTCGGCGGCGACAAAATCGTCGACTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 90 bp AGAATAGTGGAGAAGCTCTCATATTCCTGCAGTCGAAAGGGCACATaGCCCAGCAAACGGCACTGCACACGTCCATTGAGGCCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: RIVEKLSYSCSRKGT*PSKRHCTRPLRPES
Trigger: CGACTCAGGCCTCAATGGACGTGTGCAGTGCCGTTTGCTGGGCAATGTGCCCTTTCGACTGCAGGAATATGAGAGCTTCTCCACTATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS TCA 72 bp CTGCCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTTaGTCTCCACCTTTATCACGCAGATTTCCATTGAGC +
Preference number: 6 (lower is better)
Translates to: LPGNWAHCRSGP*SPPLSRRFPLS
Trigger: GCTCAATGGAAATCTGCGTGATAAAGGTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp TACAGGCTCCGCTGGACATCATGCTCACTGTCAGTTTaGTCACTCTCCTCATGTCCACTATCCTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: YRLRWTSCSLSV*SLSSCPLSFRL
Trigger: CAGCCTGAAGGATAGTGGACATGAGGAGAGTGACCAAACTGACAGTGAGCATGATGTCCAGCGGAGCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp GCTGCCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTaGATCTCCACCTTTATCACGCAGATTTCCATTGAG +
Preference number: 6 (lower is better)
Translates to: AAGKLGALSFRS*ISTFITQISIE
Trigger: CTCAATGGAAATCTGCGTGATAAAGGTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TGGTCACTCTCCTCATGTCCACTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAGGTGGAGCTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: WSLSSCPLSFRL*PSKSLKVELLL
Trigger: CAAGAGCAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACATGAGGAGAGTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS CAA 72 bp GATCCCATGGAGGTCACACTGGTGTTCAGCACATCGTaGACAGCAGTATCACAATACAGGCTCCGCTGGACA +
Preference number: 6 (lower is better)
Translates to: DPMEVTLVFSTS*TAVSQYRLRWT
Trigger: TGTCCAGCGGAGCCTGTATTGTGATACTGCTGTCAACGATGTGCTGAACACCAGTGTGACCTCCATGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ATATCCTTCAGACGCTTCACACCAGGGGACTCTTTGTaGCGACCTTCCTTCAGAATGGGGCTGACCTCATGC +
Preference number: 6 (lower is better)
Translates to: ISFRRFTPGDSL*RPSFRMGLTSC
Trigger: GCATGAGGTCAGCCCCATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGGTGTGAAGCGTCTGAAGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp ACGATATCCTTCAGACGCTTCACACCAGGGGACTCTTaGTTGCGACCTTCCTTCAGAATGGGGCTGACCTCA +
Preference number: 6 (lower is better)
Translates to: TISFRRFTPGDS*LRPSFRMGLTS
Trigger: TGAGGTCAGCCCCATTCTGAAGGAAGGTCGCAACAAAGAGTCCCCTGGTGTGAAGCGTCTGAAGGATATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 90 bp TCGATCTGTGCTGCCGGGAAACTGGGCGCATTGTCGTTCAGGTCCTaGATCTCCACCTTTATCACGCAGATTTCCATTGAGCTGGACATG +
Preference number: 6 (lower is better)
Translates to: SICAAGKLGALSFRS*ISTFITQISIELDM
Trigger: CATGTCCAGCTCAATGGAAATCTGCGTGATAAAGGTGGAGATCAAGGACCTGAACGACAATGCGCCCAGTTTCCCGGCAGCACAGATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TGTCCACTATCCTTCAGGCTGTTGCCCTCTAAGTCCTaGAAGGTGGAGCTGCTCTTGATTAAATGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: CPLSFRLLPSKS*KVELLLIKWAR
Trigger: CCGAGCCCATTTAATCAAGAGCAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS GCA 72 bp CCCCTTAGGCTCACTTTCTCCTCTGTCTTTTTGTCTTaGTCCTCGCTAATGGGAGAAACCGAGATGCAATGC +
Preference number: 6 (lower is better)
Translates to: PLRLTFSSVFLS*SSLMGETEMQC
Trigger: GCATTGCATCTCGGTTTCTCCCATTAGCGAGGAGCAAGACAAAAAGACAGAGGAGAAAGTGAGCCTAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CCA 72 bp ACATCGTTGACAGCAGTATCACAATACAGGCTCCGCTaGACATCATGCTCACTGTCAGTTTGGTCACTCTCC +
Preference number: 6 (lower is better)
Translates to: TSLTAVSQYRLR*TSCSLSVWSLS
Trigger: GGAGAGTGACCAAACTGACAGTGAGCATGATGTCCAGCGGAGCCTGTATTGTGATACTGCTGTCAACGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CAA 72 bp TGTCCACTATCCTTCAGGCTGTTGCCCTCTAAGTCCTaGAAGGTGGAGCTCTTGATTAAATGGGCTCGGCTA +
Preference number: 6 (lower is better)
Translates to: CPLSFRLLPSKS*KVELLIKWARL
Trigger: TAGCCGAGCCCATTTAATCAAGAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420881.6
CDS CAA 72 bp TGGTCACTCTCCTCATGTCCACTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAGGTGGAGCTCTTGATT +
Preference number: 6 (lower is better)
Translates to: WSLSSCPLSFRL*PSKSLKVELLI
Trigger: AATCAAGAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACATGAGGAGAGTGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420881.6
CDS CAA 90 bp CTGTCAGTTTGGTCACTCTCCTCATGTCCACTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAGGTGGAGCTGCTCTTGATTAAATGG +
Preference number: 6 (lower is better)
Translates to: LSVWSLSSCPLSFRL*PSKSLKVELLLIKW
Trigger: CCATTTAATCAAGAGCAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACATGAGGAGAGTGACCAAACTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255531.8
ENST00000373034.8
CDS CAA 90 bp CTGTCAGTTTGGTCACTCTCCTCATGTCCACTATCCTTCAGGCTGTaGCCCTCTAAGTCCTTGAAGGTGGAGCTCTTGATTAAATGGGCT +
Preference number: 6 (lower is better)
Translates to: LSVWSLSSCPLSFRL*PSKSLKVELLIKWA
Trigger: AGCCCATTTAATCAAGAGCTCCACCTTCAAGGACTTAGAGGGCAACAGCCTGAAGGATAGTGGACATGAGGAGAGTGACCAAACTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420881.6
CDS TCA 72 bp GTCCTTGATCTCCACCTTTATCACGCAGATTTCCATTaGGCTGGACATGACCTCGAGCGAGATGATGCACTT +
Preference number: 6 (lower is better)
Translates to: VLDLHLYHADFH*AGHDLERDDAL
Trigger: AAGTGCATCATCTCGCTCGAGGTCATGTCCAGCTCAATGGAAATCTGCGTGATAAAGGTGGAGATCAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000255531.8
ENST00000373034.8
ENST00000420881.6
CDS CCA 72 bp GTTAACAACGCAGTCCGACCCTCCACGTCAAGTTTGTaGAAACGGGGAGATGGCAATTTGTCCAAGAAAATC +
Preference number: 6 (lower is better)
Translates to: VNNAVRPSTSSL*KRGDGNLSKKI
Trigger: GATTTTCTTGGACAAATTGCCATCTCCCCGTTTCCACAAACTTGACGTGGAGGGTCGGACTGCGTTGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373034.8
CDS CAA 72 bp AAAGTTAACAACGCAGTCCGACCCTCCACGTCAAGTTaGTGGAAACGGGGAGATGGCAATTTGTCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: KVNNAVRPSTSS*WKRGDGNLSKK
Trigger: TTTCTTGGACAAATTGCCATCTCCCCGTTTCCACAAACTTGACGTGGAGGGTCGGACTGCGTTGTTAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373034.8