RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH18 (Homo sapiens)

Ensembl gene IDs: ENSG00000189184

Ensembl transcript IDs: ENST00000344876.9, ENST00000412923.6, ENST00000507846.5, ENST00000510305.5, ENST00000511115.5, ENST00000611581.1, ENST00000617302.1, ENST00000620262.1

Found 588 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTaGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGG +
Preference number: 1 (lower is better)
Translates to: DAGTHCSFPRAEMMC*YPQCPHRLGSPFQR
Trigger: CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR TCA 90 bp TTCTTCCCCTGGAATGAACATGTTACTCCTATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCAGCACTGGTCAGAGTGTCCCAGGAC +
Preference number: 1 (lower is better)
Translates to: FFPWNEHVTPIIRRR*GQWWHPALVRVSQD
Trigger: GTCCTGGGACACTCTGACCAGTGCTGGATGCCACCACTGCCCTCACCGTCTTCTGATTATAGGAGTAACATGTTCATTCCAGGGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR GCA 90 bp AGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTaGTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAA +
Preference number: 1 (lower is better)
Translates to: RDAGTHCSFPRAEMM*WYPQCPHRLGSPFQ
Trigger: TTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR CCA 90 bp GTCATCCTCAAGACTCTGATGTGGATGCTGCTGCTGGGGTTGCGTTaGGAATTCTTCCCCTGGAATGAACATGTTACTCCTATAATCAGA +
Preference number: 1 (lower is better)
Translates to: VILKTLMWMLLLGLR*EFFPWNEHVTPIIR
Trigger: TCTGATTATAGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR GCA 90 bp TTGAAACTCAACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATaGCAAGCTTTTGAACAAATATGTAGGAACAGGACTCTGACTTAT +
Preference number: 1 (lower is better)
Translates to: LKLNTESPAQEGPAA*QAFEQICRNRTLTY
Trigger: ATAAGTCAGAGTCCTGTTCCTACATATTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGTTGAGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR TCA 90 bp GAGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCA +
Preference number: 2 (lower is better)
Translates to: ESRDDVLVSPVSSSFGESIIRRR*GQWWHP
Trigger: TGGATGCCACCACTGCCCTCACCGTCTTCTGATTAT...GGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR GCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGTGCTGCTGCTGGGGTTaGGTTGGGAATTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVCCCWG*VGNSSP
Trigger: AGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCA...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR GCA 90 bp GAGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCCTTTTCACCGGAATCTaGAGGCTGAGCGTCATCCTC +
Preference number: 2 (lower is better)
Translates to: ESRDDVLVSPVSSSFGESLFTGI*RLSVIL
Trigger: GAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAG...GGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCCAGTGTGATGGCCTaGAATAGTAGGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKASVMA*NSRGLG
Trigger: TCCCAGGCCCCTACTATTCCAGGCCATCACACTGGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR CCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGCTCAAGACTCTGATGTaGATGCTGCTGCTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVLKTLM*MLLLGL
Trigger: CAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAG...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR GCA 90 bp GAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCAGTGTCCCAGGACCCTaGACTCCTCCGTGCAGAGTC +
Preference number: 2 (lower is better)
Translates to: ESFPKVEKLFFFSPESAGSVPGP*TPPCRV
Trigger: GACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACT...GCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR CCA 90 bp ATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGTGGATGCTGCTGCTaGGGTTGCGTTGGGAATTCT +
Preference number: 2 (lower is better)
Translates to: MMCWYPQCPHRLGSPFQRCGCCC*GCVGNS
Trigger: AGAATTCCCAACGCAACCCCAGCAGCAGCATCCACA...CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR CAA 90 bp CTGAGCGTCATCCTCAAGACTCTGATGTGGATGCTGCTGCTGGGGTaGCGTTGGGAATTCTTCCCCTGGAATGAACATGTTACTCCTATA +
Preference number: 2 (lower is better)
Translates to: LSVILKTLMWMLLLG*RWEFFPWNEHVTPI
Trigger: TATAGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGACGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR TCA 90 bp AGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTCATCCTCAAGACTCTaGTGTGGATGCTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: SVLIVWGVLSKGGKTLLLSSSRL*CGCCCW
Trigger: CCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGA...AAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCCAGTGTGATGGCCTaGAATAGTAGGGGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHASVMA*NSRGLG
Trigger: TCCCAGGCCCCTACTATTCCAGGCCATCACACTGGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCGGAACAGGCCAGTGTaGTGGCCTGGAATAGTAGGG +
Preference number: 2 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIRNRPV*WPGIVG
Trigger: CCCTACTATTCCAGGCCATCACACTGGCCTGTTCCG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACAGATTCCATTTCCTTaGAGCATGTTTCATACTACA +
Preference number: 2 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKQIPFP*SMFHTT
Trigger: TGTAGTATGAAACATGCTCCAAGGAAATGGAATCTG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR CCA 90 bp TCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTCTGGGAATTCTTCCCCTaGAATGAACATGTTACTCCT +
Preference number: 2 (lower is better)
Translates to: SKGGKTLLLFTGICRLSVWEFFP*NEHVTP
Trigger: AGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCA...GACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR CAA 90 bp CCAGTGTTTCAATTCCTGACTAGCAAGCCAGGGACGATAATATTCTaGCCTCCTGGAAACATTGTAAGGATACCTTTTTATCCTGCACAA +
Preference number: 2 (lower is better)
Translates to: PVFQFLTSKPGTIIF*PPGNIVRIPFYPAQ
Trigger: TTGTGCAGGATAAAAAGGTATCCTTACAATGTTTCCAGGAGGCAAGAATATTATCGTCCCTGGCTTGCTAGTCAGGAATTGAAACACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR TCA 90 bp CAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTATTCTTCCCCTGGAATaGACATGTTACTCCTATAAT +
Preference number: 2 (lower is better)
Translates to: QCPHRLGSPFQRWKNSSSILPLE*TCYSYN
Trigger: ATTATAGGAGTAACATGTTCATTCCAGGGGAAGAAT...AGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAATGTTCAAGTATTGTaGGAGGAAAGGGGAGATTCA +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHNVQVL*EERGDS
Trigger: TGAATCTCCCCTTTCCTCTCACAATACTTGAACATT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCAACTATTTGGCAATaGCAGTTCTTTCAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHATIWQ*QFFQGF
Trigger: AAAACCCTGAAAGAACTGGCATTGCCAAATAGTTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAATGTTCAAGTATTGTaGGAGGAAAGGGGAGATTCA +
Preference number: 2 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGINVQVL*EERGDS
Trigger: TGAATCTCCCCTTTCCTCTCACAATACTTGAACATT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATCAGATTTGAACAGTaGCTAGTTTCTACACGACTA +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIRFEQ*LVSTRL
Trigger: TAGTCGTGTAGAAACTAGCCACTGTTCAAATCTGAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAACTATTTGGCAATaGCAGTTCTTTCAGGGTTTT +
Preference number: 2 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYATIWQ*QFFQGF
Trigger: AAAACCCTGAAAGAACTGGCATTGCCAAATAGTTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATAAATGCAACTATTTaGCAATGCCAGTTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHINATI*QCQFFQ
Trigger: CTGAAAGAACTGGCATTGCCAAATAGTTGCATTTAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATCAGATTTGAACAGTaGCTAGTTTCTACACGACTA +
Preference number: 2 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIRFEQ*LVSTRL
Trigger: TAGTCGTGTAGAAACTAGCCACTGTTCAAATCTGAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGTATAATGCTTCAGTaGGGTTGTTCATACAACATA +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCIMLQ*GCSYNI
Trigger: TATGTTGTATGAACAACCCCACTGAAGCATTATACA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTATGAGATCATGCACTaGAGACAAAAGCTAAAAATG +
Preference number: 2 (lower is better)
Translates to: HSTQRDHSTINKGFLICHYEIMH*RQKLKM
Trigger: CATTTTTAGCTTTTGTCTCCAGTGCATGATCTCATA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGTATAATGCTTCAGTaGGGTTGTTCATACAACATA +
Preference number: 2 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICIMLQ*GCSYNI
Trigger: TATGTTGTATGAACAACCCCACTGAAGCATTATACA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTATGAGATCATGCACTaGAGACAAAAGCTAAAAATG +
Preference number: 2 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIYEIMH*RQKLKM
Trigger: CATTTTTAGCTTTTGTCTCCAGTGCATGATCTCATA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATAAATGCAACTATTTaGCAATGCCAGTTCTTTCAG +
Preference number: 2 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYINATI*QCQFFQ
Trigger: CTGAAAGAACTGGCATTGCCAAATAGTTGCATTTAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGCCTTTACACTTTGTaGTTGAATAGTGTATCAGAT +
Preference number: 2 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCLYTL*LNSVSD
Trigger: ATCTGATACACTATTCAACCACAAAGTGTAAAGGCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp GCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCGCTGCTGGGGTTGCGTaGGGAATTCTTCCCCTGGAA +
Preference number: 3 (lower is better)
Translates to: AVRDAGTHCSFPRAEMMCAAGVA*GILPLE
Trigger: TTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC...GCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR TCA 72 bp ACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATaGTGTGCTGGTATCCCCAGTGTCCTCATCGTTTGG +
Preference number: 3 (lower is better)
Translates to: TLEHTAHFREQR*CAGIPSVLIVW
Trigger: CCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR GCA 72 bp GGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTaGTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGT +
Preference number: 3 (lower is better)
Translates to: GTHCSFPRAEMM*WYPQCPHRLGS
Trigger: ACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR CCA 72 bp ACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTaGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCT +
Preference number: 3 (lower is better)
Translates to: THCSFPRAEMMC*YPQCPHRLGSP
Trigger: AGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR-3UTR CAA 90 bp CCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCATGCTGCTGCTGGGGTaGCGTTGGGAATTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: PVSSSFGESFPKVEKLFFMLLLG*RWEFFP
Trigger: GGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCAT...GAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR TCA 72 bp TATTGTGAGAGAAATATTCTCCGGAACAGGCCAGTGTaGTGGCCTGGAATAGTAGGGGCCTGGGAGTCAGGA +
Preference number: 3 (lower is better)
Translates to: YCERNILRNRPV*WPGIVGAWESG
Trigger: TCCTGACTCCCAGGCCCCTACTATTCCAGGCCATCACACTGGCCTGTTCCGGAGAATATTTCTCTCACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR TCA 72 bp TGGAATGAACATGTTACTCCTATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCAGCACTGGTCAGAGTG +
Preference number: 3 (lower is better)
Translates to: WNEHVTPIIRRR*GQWWHPALVRV
Trigger: CACTCTGACCAGTGCTGGATGCCACCACTGCCCTCACCGTCTTCTGATTATAGGAGTAACATGTTCATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR TCA 72 bp GCTGCTGGGGTTGCGTTGGGAATTCTTCCCCTGGAATaGACATGTTACTCCTATAATCAGAAGACGGTGAGG +
Preference number: 3 (lower is better)
Translates to: AAGVALGILPLE*TCYSYNQKTVR
Trigger: CCTCACCGTCTTCTGATTATAGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
3UTR TCA 72 bp CTGAATGCTGCCTGTTTATTATTTGAAACTCAACACTaGATCACCCGCTCAGGAAGGGCCTGCTGCATGCCA +
Preference number: 3 (lower is better)
Translates to: LNAACLLFETQH*ITRSGRACCMP
Trigger: TGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGTTGAGTTTCAAATAATAAACAGGCAGCATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATAAGAGTTCAACTATaGGGGCTAGTAGAAAGTAGA +
Preference number: 3 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKIRVQL*GLVESR
Trigger: TCTACTTTCTACTAGCCCCAATAGTTGAACTCTTAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR TCA 72 bp CTTTTCCATTGTGTTTTTCTTGTTCGCCCAGCCAACTaGATGCTGCCTGTTTATTATTTGAAACTCAACACT +
Preference number: 3 (lower is better)
Translates to: LFHCVFLVRPAN*MLPVYYLKLNT
Trigger: AGTGTTGAGTTTCAAATAATAAACAGGCAGCATTCAGTTGGCTGGGCGAACAAGAAAAACACAATGGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344876.9
3UTR-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGTGCCTTTACACTTaGTGGTTGAATAGTGTATCA +
Preference number: 3 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQCLYT*WLNSVS
Trigger: TGATACACTATTCAACCACAAAGTGTAAAGGCACTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGGAGTCAGGAAACATaGACTTTAATTCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGSQET*TLILFS
Trigger: TGAAAACAGAATTAAAGTCAATGTTTCCTGACTCCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGATAAATGCAACTATTaGGCAATGCCAGTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIDKCNY*AMPVLS
Trigger: TGAAAGAACTGGCATTGCCAAATAGTTGCATTTATC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGTGCCTTTACACTTaGTGGTTGAATAGTGTATCA +
Preference number: 3 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQCLYT*WLNSVS
Trigger: TGATACACTATTCAACCACAAAGTGTAAAGGCACTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGGAGTCAGGAAACATaGACTTTAATTCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGSQET*TLILFS
Trigger: TGAAAACAGAATTAAAGTCAATGTTTCCTGACTCCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGATAAATGCAACTATTaGGCAATGCCAGTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYDKCNY*AMPVLS
Trigger: TGAAAGAACTGGCATTGCCAAATAGTTGCATTTATC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAGTGTCCCAGGACCCTaGACTCCTCCGTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSVPGP*TPPCRV
Trigger: GACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGAGTGTCCCAGGACCCTaGACTCCTCCGTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: MMCWYPQCPHRLGSPFQRSVPGP*TPPCRV
Trigger: GACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACT...CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGGTGCCGGTGGAGTCTaGAGTGTGTCTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKGAGGV*SVSFLS
Trigger: GCTCAGGAAAGACACACTGCAGACTCCACCGGCACC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGTGGTGCTGGTAAGTTaGTTCGGCCACCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKVVLVS*FGHPAV
Trigger: AACTGCAGGGTGGCCGAATCAACTTACCAGCACCAC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGTGATGTCCCCTTTGTaGATCTGCCGGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKVMSPL*ICRDGL
Trigger: AAGGCCATCCCGGCAGATTCACAAAGGGGACATCAC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp AGGGAAGGCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: REGGKRRWNTLLISESRDIIRRR*GQWWHP
Trigger: TGGATGCCACCACTGCCCTCACCGTCTTCTGATTAT...ATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGCCCCTGGTGAAGCATTaGAAGAAGCTGAGAGACCGT +
Preference number: 4 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVPLVKH*KKLRDR
Trigger: ACGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGG...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp AACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTGCTGCTGCTGGGGTTaGGTTGGGAATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NTLLISESRDDVLVSPVSCCCWG*VGNSSP
Trigger: AGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCA...GGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp GACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTGGTATCCCGACGCTGGAACACACTaGTCATTTCCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: DAGTHCSFPRAEMMCWYPDAGTH*SFPRAE
Trigger: CTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC...GGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGGTAACCCACAGTTTTaGCTGGCAAGGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKGNPQF*LARVPS
Trigger: GGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp CCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCCGGAATCTGCAGGCTaGGCGTCATCCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: PSVLIVWGVLSKGGKTLLPESAG*ASSSRL
Trigger: GAGTCTTGAGGATGACGCTCAGCCTGCAGATTCCGG...AAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATTCCGAGAGCAGAGATaGTGTGCTGGTATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKFREQR*CAGIPS
Trigger: ACTGGGGATACCAGCACATCATCTCTGCTCTCGGAA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATCGGAATCCATCTATTaGAGGGTGCCGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSESIY*RVPVES
Trigger: AGACTCCACCGGCACCCTGCAATAGATGGATTCCGA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATAATCACTGTCTCCTaGCTCACTGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKIITVS*LTVTTA
Trigger: GGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp AGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTAGAGCAGAGATGATGTaGTGGTATCCCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RAEMMCWYPQCPHRLGSPRAEMM*WYPQCP
Trigger: AGGACACTGGGGATACCAGCACATCATCTCTGCTCT...AGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGACGCTGGAACACACTaGTCATTTCCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKDAGTH*SFPRAE
Trigger: CTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp AACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCCTCAAGACTCTGATGTaGATGCTGCTGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NTLLISESRDDVLVSPVSLKTLM*MLLLGL
Trigger: CAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAG...GGACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATTTGAAAATGCGTACTaGCTGCCCATGCCGCTACCC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKFENAY*LPMPLP
Trigger: GGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCGGCCCACAGTTGGTaGTGGGATTTTGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKAAHSW*WDFENA
Trigger: CGCATTTTCAAAATCCCACCACCAACTGTGGGCCGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACAGGGATCTCCTCCATaGCTGGCAGCCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKQGSPP*LAAILK
Trigger: CTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp GAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCGGTGCCGGTGGAGTCTaGAGTGTGTCTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ESFPKVEKLFFFSPESAGGAGGV*SVSFLS
Trigger: GCTCAGGAAAGACACACTGCAGACTCCACCGGCACC...GCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATTAGCGCCCTCATCTaGATCCGTGGCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKISALI*IRGIQI
Trigger: GATCTGAATGCCACGGATCCAGATGAGGGCGCTAAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGGCAGAGATGATGTGCTaGTATCCCCAGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MMCWYPQCPHRLGSPFQRAEMMC*YPQCPH
Trigger: ATGAGGACACTGGGGATACCAGCACATCATCTCTGC...CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp TGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAGCAGTGTGTCTTTCCTaGGCGATTCTTTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CWYPQCPHRLGSPFQRWKAVCLS*AILSPF
Trigger: AAAGGGAGAAAGAATCGCTCAGGAAAGACACACTGC...TTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGGATTGCCTTTGTCCTaGATGATAACTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKGLPLS*MITDSS
Trigger: GGAGCTGTCAGTTATCATTCAGGACAAAGGCAATCC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGGATGCCTGGCTTACTaGAGTCATTGCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKGCLAY*SHCCTC
Trigger: ACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACACCAAACTGTTGAGTaGCTGGTGACTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKHQTVE*LVTVVT
Trigger: AGTCACAACAGTCACCAGTCACTCAACAGTTTGGTG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKMESSP*VCLVVR
Trigger: ACGAACGACCAAACAAACGCAAGGACTGGACTCCAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAATGCGAGTCCCAACTaGTGCACTCTCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKNASPN*CTLRYL
Trigger: GAGATATCTGAGAGTGCAGCAGTTGGGACTCGCATT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp TCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTCATAATCACTGTCTCCTaGCTCACTGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: SKGGKTLLLFTGICRLSVIITVS*LTVTTA
Trigger: GGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTAT...GACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp CCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCCTTTTCACCGGAATCTaGAGGCTGAGCGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PVSSSFGESFPKVEKLFFLFTGI*RLSVIL
Trigger: GAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAG...GAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp TGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAGCAGAGTCTCATAGCTaGACTGCTGGAATTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CWYPQCPHRLGSPFQRWKAESHS*TAGILP
Trigger: TGGAAGAATTCCAGCAGTGCAGCTATGAGACTCTGC...TTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp CCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCATTGCAGGGTGCCGGTaGAGTCTGCAGTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PVSSSFGESFPKVEKLFFIAGCR*SLQCVF
Trigger: AAAGACACACTGCAGACTCCACCGGCACCCTGCAAT...GAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGTCCTTGCGTTTGTTTaGTCGTTCGTCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKVLAFV*SFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGAC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACCTCATCTGGATCCGTaGCATTCAGATCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKPHLDP*HSDLRA
Trigger: TGCTCTTAGATCTGAATGCCACGGATCCAGATGAGG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATCGAAAACTTGGTCTTaGCTGATATTGCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSKTWS*LILPLV
Trigger: CACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGCAACAGCCTATCTATTaGAGAATCTCGCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVQQPIY*RISPQI
Trigger: GATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTG...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp GCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAAGTGTCCTCATCGTTTaGGGAGTCCTTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AGIPSVLIVWGVLSKGGKSVLIV*GVLSKG
Trigger: ACCTTTGGAAAGGACTCCCCAAACGATGAGGACACT...TTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp AGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTCATCCTGGCGGTAAGAGACGCTaGAACACACTGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: RWKNSSSFHRNLQAERHPGGKRR*NTLLIS
Trigger: GGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCC...AGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCCCACAGTTGGTGGTaGGATTTTGAAAATGCGTAC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKAHSWW*DFENAY
Trigger: GTACGCATTTTCAAAATCCCACCACCAACTGTGGGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACATGATCAAAGATTCTaGGGGCATAGATGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKHDQRF*GHRWLH
Trigger: ATGGAGCCATCTATGCCCTCAGAATCTTTGATCATG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp TTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTTCATCCTCAAGACTCTaGTGTGGATGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FQRWKNSSSFHRNLQAERSSSRL*CGCCCW
Trigger: CCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGA...ACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp TTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTTCGGAATCCATCTATTaGAGGGTGCCGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: FQRWKNSSSFHRNLQAERSESIY*RVPVES
Trigger: AGACTCCACCGGCACCCTGCAATAGATGGATTCCGA...ACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGATCTAAGAGCAAAGTaGCAACCGGGGAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKDLRAK*QPGSFL
Trigger: TAGAAAACTCCCCGGTTGGCACTTTGCTCTTAGATC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCAAGGGTCCCTTCCTaGGCTCCAGGGAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHARVPS*APGSWT
Trigger: GGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCGTACTGGCTGCCCATaGCGCTACCCCCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRTGCP*RYPLWV
Trigger: TACCCACAGGGGGTAGCGGCATGGGCAGCCAGTACG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACAGTTTGTTAATCTCTaGCACCAGTTCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKQFVNL*HQFTGI
Trigger: GATGCCAGTGAACTGGTGGCAGAGATTAACAAACTG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp TCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: SKGGKTLLLFTGICRLSVQIPSA*SPVLAF
Trigger: AAACGCAAGGACTGGACTCCATGCCGAAGGTATCTG...GACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGGTTTCCTCGAAAACTTaGTCTTGGCTGATATTGCCC +
Preference number: 4 (lower is better)
Translates to: MMCWYPQCPHRLGSPFQRVSSKT*SWLILP
Trigger: GGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAAC...CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGAGTCTCATAGCTGCTaGAATTCTTCCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKESHSC*NSSICE
Trigger: CTCACAGATGGAAGAATTCCAGCAGCTATGAGACTC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp AGAGCAGAGATGATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTGGGAATTCTTCCCCTaGAATGAACATGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: RAEMMCWYPQCPHRLGSPWEFFP*NEHVTP
Trigger: AGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCA...AGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATCATCTCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp AGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCCGAGAGCAGAGATaGTGTGCTGGTATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVLIVWGVLSKGGKTLLLFREQR*CAGIPS
Trigger: ACTGGGGATACCAGCACATCATCTCTGCTCTCGGAA...AAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGCTGCACACTGGAGTaGGTTCCAAGTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGCTLE*VPSGGP
Trigger: TGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATCAATATGGAAAAGCTaGAGATGCTCTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSIWKS*RCSVGR
Trigger: TCTACCCACAGAGCATCTGCAGCTTTTCCATATTGA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCTTCCTCCATCTCTTaGTTCTACCACAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKASSIS*FYHKSD
Trigger: ATCACTTTTGTGGTAGAAGCAAGAGATGGAGGAAGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGTGTCCCAGGACCCTaGACTCCTCCGTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSVPGP*TPPCRV
Trigger: GACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCAAGGGTCCCTTCCTaGGCTCCAGGGAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIARVPS*APGSWT
Trigger: GGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAAATTCTCTGGCACGTaGTTTGATGAGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKKFSGT*FDEIVT
Trigger: GGTGACAATCTCATCAAACCACGTGCCAGAGAATTT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp GTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTGTGGATGCTGCTGCTaGGGTTGCGTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: VSSSFGESFPKVEKLFFFCGCCC*GCVGNS
Trigger: AGAATTCCCAACGCAACCCCAGCAGCAGCATCCACA...AAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGCGCTCCAGGGAGTTaGACCGATCCACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCAPGS*TDPPHC
Trigger: GCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACATAATCCACTTGCTTaGAAAGAGTCAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKHNPLA*KESNVL
Trigger: GAGGACATTTGACTCTTTTCAAGCAAGTGGATTATG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGATTCTTCCCCTGGAATaGACATGTTACTCCTATAAT +
Preference number: 4 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVILPLE*TCYSYN
Trigger: ATTATAGGAGTAACATGTTCATTCCAGGGGAAGAAT...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGCTGCACACTGGAGTaGGTTCCAAGTGGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGCTLE*VPSGGP
Trigger: TGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCAGCATTGAAAGAAGCTaGGAGACCGTGTCACGACTT +
Preference number: 4 (lower is better)
Translates to: ESFPKVEKLFFFSPESAGSIERS*ETVSRL
Trigger: AAGTCGTGACACGGTCTCTCAGCTTCTTTCAATGCT...GCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGTGCCGGTGGAGTCTaGAGTGTGTCTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGAGGV*SVSFLS
Trigger: GCTCAGGAAAGACACACTGCAGACTCCACCGGCACC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: QCPHRLGSPFQRWKNSSSMESSP*VCLVVR
Trigger: ACGAACGACCAAACAAACGCAAGGACTGGACTCCAT...AGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGTGTCCCAGGACCCTaGACTCCTCCGTGCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISVPGP*TPPCRV
Trigger: GACTCTGCACGGAGGAGTGCAGGGTCCTGGGACACT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAAGGGTCCCTTCCTaGGCTCCAGGGAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYARVPS*APGSWT
Trigger: GGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCGTACTGGCTGCCCATaGCGCTACCCCCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYRTGCP*RYPLWV
Trigger: TACCCACAGGGGGTAGCGGCATGGGCAGCCAGTACG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCAACTATTTGGCAATaGCAGTTCTTTCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKATIWQ*QFFQGF
Trigger: AAAACCCTGAAAGAACTGGCATTGCCAAATAGTTGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATTGCCCAGTACATCGTaGTTGAAAGATACTATCAGA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKLPSTS*LKDTIR
Trigger: TCTGATAGTATCTTTCAACCACGATGTACTGGGCAA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACAGGGCTGTTGTCATTaGAGTCTGAAATGCTTATTT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKQGCCH*SLKCLF
Trigger: AAATAAGCATTTCAGACTCCAATGACAACAGCCCTG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp TTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTTCGAAAACTTGGTCTTaGCTGATATTGCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FQRWKNSSSFHRNLQAERSKTWS*LILPLV
Trigger: CACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGA...ACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACCCACAGTTTTGGCTaGCAAGGGTCCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTHSFG*QGSLPA
Trigger: CGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGCCGCTACCCCCTGTaGGTAACCCACAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCRYPL*VTHSFG
Trigger: GCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGAGTGAGTTCCAAGTaGCGGCCCACAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGVSSK*RPTVGG
Trigger: ACCACCAACTGTGGGCCGCCACTTGGAACTCACTCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATTCCCATCATTGAGGTaGTTGAGCACATTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKFPSLR*LSTLSK
Trigger: TTTTGACAATGTGCTCAACCACCTCAATGATGGGAA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCATGTCTGAGGCAGTaGGCTGAAGCTCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPCLRQ*AEARSL
Trigger: CAAGCTACGAGCTTCAGCTCACTGCCTCAGACATGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTGGTGCTGGTAAGTTaGTTCGGCCACCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVVLVS*FGHPAV
Trigger: AACTGCAGGGTGGCCGAATCAACTTACCAGCACCAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTGATGTCCCCTTTGTaGATCTGCCGGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVMSPL*ICRDGL
Trigger: AAGGCCATCCCGGCAGATTCACAAAGGGGACATCAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCGGAATCTGCAGGCTaGGCGTCATCCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPESAG*ASSSRL
Trigger: GAGTCTTGAGGATGACGCTCAGCCTGCAGATTCCGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGCTGGCAGCCATTTTaGAGAAGGCTGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGWQPF*RRLHTG
Trigger: TCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGTGCCGGTGGAGTCTaGAGTGTGTCTTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGAGGV*SVSFLS
Trigger: GCTCAGGAAAGACACACTGCAGACTCCACCGGCACC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCACTGTCCAGGGGAATaGGAGTCCCAACTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIHCPGE*ESQLLH
Trigger: GTGCAGCAGTTGGGACTCGCATTCCCCTGGACAGTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGTGACTCTGCCGGCTaGCCATCTGCCCTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCDSAG*PSALFL
Trigger: TAGAAAGAGGGCAGATGGGCAGCCGGCAGAGTCACA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTGAATCTGCCGGGATaGCCTTTTTGGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVNLPG*PFWVVL
Trigger: CAGCACCACCCAAAAAGGCCATCCCGGCAGATTCAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GATGTGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGAGTCCTTTCCAAAGGTaGAAAAACTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DVLVSPVSSSFGESFPKVSPFQR*KNSSSF
Trigger: AAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACT...CACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTACCCACAGTTTTGGCTaGCAAGGGTCCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGITHSFG*QGSLPA
Trigger: CGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGCCGCTACCCCCTGTaGGTAACCCACAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICRYPL*VTHSFG
Trigger: GCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAATATTCTTGCCTCCTaGAAACATTGTAAGGATACC +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKNILAS*KHCKDT
Trigger: GGTATCCTTACAATGTTTCCAGGAGGCAAGAATATT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCATGTCTGAGGCAGTaGGCTGAAGCTCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPCLRQ*AEARSL
Trigger: CAAGCTACGAGCTTCAGCTCACTGCCTCAGACATGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGATGAGCCAGACCTCTaGGGTACTCCCATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIDEPDL*GTPMSE
Trigger: CTCAGACATGGGAGTACCTCAGAGGTCTGGCTCATC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTGGTGCTGGTAAGTTaGTTCGGCCACCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVVLVS*FGHPAV
Trigger: AACTGCAGGGTGGCCGAATCAACTTACCAGCACCAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCCCTGGTGAAGCATTaGAAGAAGCTGAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPLVKH*KKLRDL
Trigger: CAGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIIRRR*GQWWHP
Trigger: TGGATGCCACCACTGCCCTCACCGTCTTCTGATTAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCATCCTCAAGACTCTaGTGTGGATGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSSSRL*CGCCCW
Trigger: CCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCGGAATCTGCAGGCTaGGCGTCATCCTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPESAG*ASSSRL
Trigger: GAGTCTTGAGGATGACGCTCAGCCTGCAGATTCCGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGCTGGCAGCCATTTTaGAGAAGGCTGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGWQPF*RRLHTG
Trigger: TCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCGGAACAGGCCAGTGTaGTGGCCTGGAATAGTAGGG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYRNRPV*WPGIVG
Trigger: CCCTACTATTCCAGGCCATCACACTGGCCTGTTCCG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCATCTATTGCAGGGTaGCGGTGGAGTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPSIAG*RWSLQC
Trigger: ACACTGCAGACTCCACCGGCACCCTGCAATAGATGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGCCGGCTGCCCATCTaGCCTCTTTCTAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICRLPI*PLSKVG
Trigger: TCCTACCTTAGAAAGAGGGCAGATGGGCAGCCGGCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGTGACTCTGCCGGCTaGCCATCTGCCCTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICDSAG*PSALFL
Trigger: TAGAAAGAGGGCAGATGGGCAGCCGGCAGAGTCACA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATAATCACTGTCTCCTaGCTCACTGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIITVS*LTVTTA
Trigger: GGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGCTGCTGCTGGGGTTaGGTTGGGAATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICCCWG*VGNSSP
Trigger: AGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGACGCTGGAACACACTaGTCATTTCCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHDAGTH*SFPRAE
Trigger: CTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACCATATTACTGCTGGTaGTTTAAATTAAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKPYYCW*FKLRTV
Trigger: CACTGTTCTTAATTTAAAGCACCAGCAGTAATATGG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTGCAGGGTGCCGGTaGAGTCTGCAGTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIAGCR*SLQCVF
Trigger: AAAGACACACTGCAGACTCCACCGGCACCCTGCAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTGAATCTGCCGGGATaGCCTTTTTGGGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVNLPG*PFWVVL
Trigger: CAGCACCACCCAAAAAGGCCATCCCGGCAGATTCAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGTGGATGCTGCTGCTaGGGTTGCGTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCGCCC*GCVGNS
Trigger: AGAATTCCCAACGCAACCCCAGCAGCAGCATCCACA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAGTCCTTTCCAAAGGTaGAAAAACTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSPFQR*KNSSSF
Trigger: AAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGCGGTAAGAGACGCTaGAACACACTGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGGKRR*NTLLIS
Trigger: GGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACCCACAGTTTTGGCTaGCAAGGGTCCCTTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTHSFG*QGSLPA
Trigger: CGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGTAACCCACAGTTTTaGCTGGCAAGGGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGNPQF*LARVPS
Trigger: GGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGCCGCTACCCCCTGTaGGTAACCCACAGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCRYPL*VTHSFG
Trigger: GCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTTTGAAAATGCGTACTaGCTGCCCATGCCGCTACCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHFENAY*LPMPLP
Trigger: GGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGAGTGAGTTCCAAGTaGCGGCCCACAGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGVSSK*RPTVGG
Trigger: ACCACCAACTGTGGGCCGCCACTTGGAACTCACTCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATAAATGCAACTATTTaGCAATGCCAGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKINATI*QCQFFQ
Trigger: CTGAAAGAACTGGCATTGCCAAATAGTTGCATTTAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATGCCTTTACACTTTGTaGTTGAATAGTGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKCLYTL*LNSVSD
Trigger: ATCTGATACACTATTCAACCACAAAGTGTAAAGGCA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCCAGTGTGATGGCCTaGAATAGTAGGGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYASVMA*NSRGLG
Trigger: TCCCAGGCCCCTACTATTCCAGGCCATCACACTGGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCATGTCTGAGGCAGTaGGCTGAAGCTCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPCLRQ*AEARSL
Trigger: CAAGCTACGAGCTTCAGCTCACTGCCTCAGACATGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGATGAGCCAGACCTCTaGGGTACTCCCATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYDEPDL*GTPMSE
Trigger: CTCAGACATGGGAGTACCTCAGAGGTCTGGCTCATC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTACTATGGCGCAGCTaGGTTCAGCATTCACACCAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILLWRS*VQHSHQ
Trigger: CTGGTGTGAATGCTGAACTCAGCTGCGCCATAGTAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTGATGTCCCCTTTGTaGATCTGCCGGGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVMSPL*ICRDGL
Trigger: AAGGCCATCCCGGCAGATTCACAAAGGGGACATCAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIIRRR*GQWWHP
Trigger: TGGATGCCACCACTGCCCTCACCGTCTTCTGATTAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCATCCTCAAGACTCTaGTGTGGATGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISSSRL*CGCCCW
Trigger: CCAGCAGCAGCATCCACATCAGAGTCTTGAGGATGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTTCCGAGAGCAGAGATaGTGTGCTGGTATCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIFREQR*CAGIPS
Trigger: ACTGGGGATACCAGCACATCATCTCTGCTCTCGGAA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTTGGTGGTGGGATTTTaGAAATGCGTACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHLVVGF*KCVLAA
Trigger: GGCAGCCAGTACGCATTTTCAAAATCCCACCACCAA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGCTGGCAGCCATTTTaGAGAAGGCTGCACACTGGA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGWQPF*RRLHTG
Trigger: TCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCGGAATCCATCTATTaGAGGGTGCCGGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISESIY*RVPVES
Trigger: AGACTCCACCGGCACCCTGCAATAGATGGATTCCGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCACAACTGTGGTATTaGTTACCAGTTGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAQLWY*LPVASG
Trigger: GCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGCCGGCTGCCCATCTaGCCTCTTTCTAAGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCRLPI*PLSKVG
Trigger: TCCTACCTTAGAAAGAGGGCAGATGGGCAGCCGGCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGTGACTCTGCCGGCTaGCCATCTGCCCTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCDSAG*PSALFL
Trigger: TAGAAAGAGGGCAGATGGGCAGCCGGCAGAGTCACA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGCTGCTGCTGGGGTTaGGTTGGGAATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCCCWG*VGNSSP
Trigger: AGGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTTTTCACCGGAATCTaGAGGCTGAGCGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILFTGI*RLSVIL
Trigger: GAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGAGCAGAGATGATGTaGTGGTATCCCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRAEMM*WYPQCP
Trigger: AGGACACTGGGGATACCAGCACATCATCTCTGCTCT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTGCAGGGTGCCGGTaGAGTCTGCAGTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIAGCR*SLQCVF
Trigger: AAAGACACACTGCAGACTCCACCGGCACCCTGCAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQIPSA*SPVLAF
Trigger: AAACGCAAGGACTGGACTCCATGCCGAAGGTATCTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTAGCGCCCTCATCTaGATCCGTGGCATTCAGATC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHISALI*IRGIQI
Trigger: GATCTGAATGCCACGGATCCAGATGAGGGCGCTAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGTGGATGCTGCTGCTaGGGTTGCGTTGGGAATTCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICGCCC*GCVGNS
Trigger: AGAATTCCCAACGCAACCCCAGCAGCAGCATCCACA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTCAAGACTCTGATGTaGATGCTGCTGCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILKTLM*MLLLGL
Trigger: CAACCCCAGCAGCAGCATCCACATCAGAGTCTTGAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGCGGTAAGAGACGCTaGAACACACTGCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGGKRR*NTLLIS
Trigger: GGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTGGCGGCCCACAGTTaGTGGTGGGATTTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVAAHS*WWDFEN
Trigger: ATTTTCAAAATCCCACCACCAACTGTGGGCCGCCAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAAGAAGGCTGCACACTaGAGTGAGTTCCAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIKKAAH*SEFQVA
Trigger: CGCCACTTGGAACTCACTCCAGTGTGCAGCCTTCTT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGGGATCTCCTCCATaGCTGGCAGCCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQGSPP*LAAILK
Trigger: CTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCAGTGTGTCTTTCCTaGGCGATTCTTTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAVCLS*AILSPF
Trigger: AAAGGGAGAAAGAATCGCTCAGGAAAGACACACTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCAGAATCCTTGTCCTaGACTCTGACCAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPESLS*TLTKAT
Trigger: TGTTGCTTTGGTCAGAGTTCAGGACAAGGATTCTGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTACTATGGCGCAGCTaGGTTCAGCATTCACACCAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLLWRS*VQHSHQ
Trigger: CTGGTGTGAATGCTGAACTCAGCTGCGCCATAGTAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCACCAAACTGTTGAGTaGCTGGTGACTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHHQTVE*LVTVVT
Trigger: AGTCACAACAGTCACCAGTCACTCAACAGTTTGGTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQEWRG*VLMRNS
Trigger: AGAATTTCTCATTAGAACTCACCCACGCCACTCCTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGCATTGAAAGAAGCTaGGAGACCTGCTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSIERS*ETCSTA
Trigger: TGCTGTTGAGCAGGTCTCTCAGCTTCTTTCAATGCT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATAATCAGAAGACGGTaGGGGCAGTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYIIRRR*GQWWHP
Trigger: TGGATGCCACCACTGCCCTCACCGTCTTCTGATTAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTTGGTGGTGGGATTTTaGAAATGCGTACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILVVGF*KCVLAA
Trigger: GGCAGCCAGTACGCATTTTCAAAATCCCACCACCAA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTTCACTGGCATCCATaGGTTCGTGTTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVHWHP*VRVSHH
Trigger: ATGATGGGAAACACGAACTCATGGATGCCAGTGAAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTTCGCCCAGCCAACTaGATGCTGCCTGTTTATTAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVRPAN*MLPVYY
Trigger: ATAATAAACAGGCAGCATTCAGTTGGCTGGGCGAAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHMESSP*VCLVVR
Trigger: ACGAACGACCAAACAAACGCAAGGACTGGACTCCAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGAGAATTTCCCCTCTaGATGGCTCGAAATCGAACA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGEFPL*MARNRT
Trigger: TGTTCGATTTCGAGCCATGCAGAGGGGAAATTCTCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCGAGTCCCAACTGCTaGACTCTCAGATATCTCAAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHASPNC*TLRYLN
Trigger: ATTGAGATATCTGAGAGTGCAGCAGTTGGGACTCGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCACAACTGTGGTATTaGTTACCAGTTGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAQLWY*LPVASG
Trigger: GCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTCTCCTCATTACCTaGTACTATGGCGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHILLIT*YYGAAE
Trigger: CTCAGCTGCGCCATAGTAGCAGGTAATGAGGAGAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATAATCACTGTCTCCTaGCTCACTGTCACCACGGCC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYIITVS*LTVTTA
Trigger: GGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTTTTCACCGGAATCTaGAGGCTGAGCGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLFTGI*RLSVIL
Trigger: GAGGATGACGCTCAGCCTGCAGATTCCGGTGAAAAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGACGCTGGAACACACTaGTCATTTCCGAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYDAGTH*SFPRAE
Trigger: CTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACCGATCCACCTCACTaGATTCAGAATAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTDPPH*IQNRCP
Trigger: TGGACACCTATTCTGAATGCAGTGAGGTGGATCGGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCTCATCTGGATCCGTaGCATTCAGATCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPHLDP*HSDLRA
Trigger: TGCTCTTAGATCTGAATGCCACGGATCCAGATGAGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCGGCTTCTCTGGAAGTaGGGTGGATTGTCATTGATA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRLLWK*GGLSLI
Trigger: TATCAATGACAATCCACCCCACTTCCAGAGAAGCCG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCATATCGGCTTCTCTaGAAGTGGGGTGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSYRLL*KWGGLS
Trigger: TGACAATCCACCCCACTTCCAGAGAAGCCGATATGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACAGCAGGAGTGGCGTaGGTGAGTTCTAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTAGVA*VSSNEK
Trigger: TTTCTCATTAGAACTCACCCACGCCACTCCTGCTGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCAGAGATGATGTGCTaGTATCCCCAGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAEMMC*YPQCPH
Trigger: ATGAGGACACTGGGGATACCAGCACATCATCTCTGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTTTGAAAATGCGTACTaGCTGCCCATGCCGCTACCC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYFENAY*LPMPLP
Trigger: GGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCGGCCCACAGTTGGTaGTGGGATTTTGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAAHSW*WDFENA
Trigger: CGCATTTTCAAAATCCCACCACCAACTGTGGGCCGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTGGCGGCCCACAGTTaGTGGTGGGATTTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVAAHS*WWDFEN
Trigger: ATTTTCAAAATCCCACCACCAACTGTGGGCCGCCAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAAGAAGGCTGCACACTaGAGTGAGTTCCAAGTGGCG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYKKAAH*SEFQVA
Trigger: CGCCACTTGGAACTCACTCCAGTGTGCAGCCTTCTT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGGGATCTCCTCCATaGCTGGCAGCCATTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQGSPP*LAAILK
Trigger: CTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCTCTGTGGGTAGAGTaGTCACATCAAACTCTATGG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIALWVE*SHQTLW
Trigger: CCATAGAGTTTGATGTGATCACTCTACCCACAGAGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTCCTGAATGATAACTaGCAGCTCCCATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVLNDN*QLPFCV
Trigger: TACACAGAATGGGAGCTGTCAGTTATCATTCAGGAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGATTGCCTTTGTCCTaGATGATAACTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGLPLS*MITDSS
Trigger: GGAGCTGTCAGTTATCATTCAGGACAAAGGCAATCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGATGCCTGGCTTACTaGAGTCATTGCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGCLAY*SHCCTC
Trigger: ACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTTCACTGGCATCCATaGGTTCGTGTTTCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVHWHP*VRVSHH
Trigger: ATGATGGGAAACACGAACTCATGGATGCCAGTGAAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTTTGAAACTCAACACTaGATCACCCGCTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIFETQH*ITRSGR
Trigger: CCTTCCTGAGCGGGTGATTCAGTGTTGAGTTTCAAA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGCATTGAAAGAAGCTaGGAGACCTCAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISIERS*ETSTAG
Trigger: TCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGCT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGGAAAAGCTGCAGATaGTCTGTGGGTAGAGTGATC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIWKSCR*SVGRVI
Trigger: GATCACTCTACCCACAGAGCATCTGCAGCTTTTCCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAATGCGAGTCCCAACTaGTGCACTCTCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGINASPN*CTLRYL
Trigger: GAGATATCTGAGAGTGCAGCAGTTGGGACTCGCATT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAACATCTGGATCAAATaGACTGTCCAGGGGAATGCG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGINIWIK*TVQGNA
Trigger: CGCATTCCCCTGGACAGTGCATTTGATCCAGATGTT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGACCACTATGAGTTCTaGATACTTGGCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHDHYEF*ILGSIS
Trigger: ACTGATGGAGCCAAGTATGCAGAACTCATAGTGGTC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGATCTAAGAGCAAAGTaGCAACCGGGGAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHDLRAK*QPGSFL
Trigger: TAGAAAACTCCCCGGTTGGCACTTTGCTCTTAGATC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCACAACTGTGGTATTaGTTACCAGTTGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAQLWY*LPVASG
Trigger: GCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCGTATTATTACGCAATaGAGGCCCTATAACCACAGG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRIITQ*RPYNHR
Trigger: CCTGTGGTTATAGGGCCTGCATTGCGTAATAATACG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTCTCCTCATTACCTaGTACTATGGCGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIILLIT*YYGAAE
Trigger: CTCAGCTGCGCCATAGTAGCAGGTAATGAGGAGAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCAGAGTCTCATAGCTaGTGGAATTCTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAESHS*WNSSIC
Trigger: ACAGATGGAAGAATTCCAGCAGCTATGAGACTCTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGAGCAGAGATGATGTaGTGGTATCCCCAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYRAEMM*WYPQCP
Trigger: AGGACACTGGGGATACCAGCACATCATCTCTGCTCT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGTTTGTTAATCTCTaGCACCAGTTCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQFVNL*HQFTGI
Trigger: GATGCCAGTGAACTGGTGGCAGAGATTAACAAACTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCAATATGGAAAAGCTaGAGATGCTCGTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSIWKS*RCSCHD
Trigger: GTCGTGACACGAGCATCTGCAGCTTTTCCATATTGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTCCTTGCGTTTGTTTaGTCGTTCGTCCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVLAFV*SFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCGGCTTCTCTGGAAGTaGGGTGGATTGTCATTGATA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIRLLWK*GGLSLI
Trigger: TATCAATGACAATCCACCCCACTTCCAGAGAAGCCG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCGAAAACTTGGTCTTaGCTGATATTGCCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISKTWS*LILPLV
Trigger: CACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTTTCCTCGAAAACTTaGTCTTGGCTGATATTGCCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVSSKT*SWLILP
Trigger: GGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGAGTCTCATAGCTGCTaGAATTCTTCCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHESHSC*NSSICE
Trigger: CTCACAGATGGAAGAATTCCAGCAGCTATGAGACTC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGTGTCCTCATCGTTTaGGGAGTCCTTTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISVLIV*GVLSKG
Trigger: ACCTTTGGAAAGGACTCCCCAAACGATGAGGACACT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAGAGATGATGTGCTaGTATCCCCAGTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAEMMC*YPQCPH
Trigger: ATGAGGACACTGGGGATACCAGCACATCATCTCTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTGGCGGCCCACAGTTaGTGGTGGGATTTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVAAHS*WWDFEN
Trigger: ATTTTCAAAATCCCACCACCAACTGTGGGCCGCCAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAGTGTGTCTTTCCTaGGCGATTCTTTCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAVCLS*AILSPF
Trigger: AAAGGGAGAAAGAATCGCTCAGGAAAGACACACTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCAGTACATCGTGGTTaGAAGATACTATCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPVHRG*KILSEV
Trigger: CACTTCTGATAGTATCTTTCAACCACGATGTACTGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCTTGTCCTGAACTCTaGCCAAAGCAACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPCPEL*PKQQMY
Trigger: ATACATTTGTTGCTTTGGTCAGAGTTCAGGACAAGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCAGAATCCTTGTCCTaGACTCTGACCAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPESLS*TLTKAT
Trigger: TGTTGCTTTGGTCAGAGTTCAGGACAAGGATTCTGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCATGATCAAAGATTCTaGGGGCATAGATGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIHDQRF*GHRWLH
Trigger: ATGGAGCCATCTATGCCCTCAGAATCTTTGATCATG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTTGCCCTTATTCTTGTaGCATGAAAGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHLPLFL*HESHFQ
Trigger: CTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTCCTGAATGATAACTaGCAGCTCCCATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVLNDN*QLPFCV
Trigger: TACACAGAATGGGAGCTGTCAGTTATCATTCAGGAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGATTGCCTTTGTCCTaGATGATAACTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGLPLS*MITDSS
Trigger: GGAGCTGTCAGTTATCATTCAGGACAAAGGCAATCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGATGCCTGGCTTACTaGAGTCATTGCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGCLAY*SHCCTC
Trigger: ACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCACCAAACTGTTGAGTaGCTGGTGACTGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYHQTVE*LVTVVT
Trigger: AGTCACAACAGTCACCAGTCACTCAACAGTTTGGTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQEWRG*VLMRNS
Trigger: AGAATTTCTCATTAGAACTCACCCACGCCACTCCTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTCTGGCGGACATCTTaGAGCAGTTTGTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILWRTS*SSLLIS
Trigger: AGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTAGGAACAGGACTCTaGCTTATAGACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVGTGL*LIDSSL
Trigger: TAAGGAACTGTCTATAAGTCAGAGTCCTGTTCCTAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGCATTGAAAGAAGCTaGGAGACCTCAACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSIERS*ETSTAG
Trigger: TCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGCT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYMESSP*VCLVVR
Trigger: ACGAACGACCAAACAAACGCAAGGACTGGACTCCAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGGAAAAGCTGCAGATaGTCTGTGGGTAGAGTGATC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYWKSCR*SVGRVI
Trigger: GATCACTCTACCCACAGAGCATCTGCAGCTTTTCCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCAATATGGAAAAGCTaGAGATGCTCTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSIWKS*RCSVGR
Trigger: TCTACCCACAGAGCATCTGCAGCTTTTCCATATTGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAATGCGAGTCCCAACTaGTGCACTCTCAGATATCTC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYNASPN*CTLRYL
Trigger: GAGATATCTGAGAGTGCAGCAGTTGGGACTCGCATT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAACATCTGGATCAAATaGACTGTCCAGGGGAATGCG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYNIWIK*TVQGNA
Trigger: CGCATTCCCCTGGACAGTGCATTTGATCCAGATGTT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGACCACTATGAGTTCTaGATACTTGGCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIDHYEF*ILGSIS
Trigger: ACTGATGGAGCCAAGTATGCAGAACTCATAGTGGTC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGATCTAAGAGCAAAGTaGCAACCGGGGAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIDLRAK*QPGSFL
Trigger: TAGAAAACTCCCCGGTTGGCACTTTGCTCTTAGATC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCTTCCTCCATCTCTTaGTTCTACCACAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHASSIS*FYHKSD
Trigger: ATCACTTTTGTGGTAGAAGCAAGAGATGGAGGAAGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCGTATTATTACGCAATaGAGGCCCTATAACCACAGG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIRIITQ*RPYNHR
Trigger: CCTGTGGTTATAGGGCCTGCATTGCGTAATAATACG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACCGATCCACCTCACTaGATTCAGAATAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTDPPH*IQNRCP
Trigger: TGGACACCTATTCTGAATGCAGTGAGGTGGATCGGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGTTTGTTAATCTCTaGCACCAGTTCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQFVNL*HQFTGI
Trigger: GATGCCAGTGAACTGGTGGCAGAGATTAACAAACTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTTTCCCCAACATCTaGATCAAATGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIFPNI*IKCTVQ
Trigger: CTGGACAGTGCATTTGATCCAGATGTTGGGGAAAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCGGCTTCTCTGGAAGTaGGGTGGATTGTCATTGATA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYRLLWK*GGLSLI
Trigger: TATCAATGACAATCCACCCCACTTCCAGAGAAGCCG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTCATATCGGCTTCTCTaGAAGTGGGGTGGATTGTCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSYRLL*KWGGLS
Trigger: TGACAATCCACCCCACTTCCAGAGAAGCCGATATGA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACTTCAGAAGGACTTTaGTATGTAGCTGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTSEGL*YVAEDC
Trigger: GCAATCCTCAGCTACATACCAAAGTCCTTCTGAAGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACAGCAGGAGTGGCGTaGGTGAGTTCTAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTAGVA*VSSNEK
Trigger: TTTCTCATTAGAACTCACCCACGCCACTCCTGCTGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAACAGCCTATCTATTaGAGAATCTCGCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQQPIY*RISPQI
Trigger: GATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGGGAATTCTTCCCCTaGAATGAACATGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHWEFFP*NEHVTP
Trigger: AGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCCCACAGTTGGTGGTaGGATTTTGAAAATGCGTAC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAHSWW*DFENAY
Trigger: GTACGCATTTTCAAAATCCCACCACCAACTGTGGGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
3UTR CAA 72 bp CAATTCCTGACTAGCAAGCCAGGGACGATAATATTCTaGCCTCCTGGAAACATTGTAAGGATACCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: QFLTSKPGTIIF*PPGNIVRIPFY
Trigger: ATAAAAAGGTATCCTTACAATGTTTCCAGGAGGCAAGAATATTATCGTCCCTGGCTTGCTAGTCAGGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCTACATTTGGTACTTaGAACTTGAAAGCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHATFGT*NLKASL
Trigger: AAGAGACGCTTTCAAGTTTCAAGTACCAAATGTAGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCATTGGTCAGTTTATaGGATTTCCCTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYALVSL*DFPHRA
Trigger: TGCTCTGTGAGGGAAATCTCATAAACTGACCAATGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGGTATGAGAGATCTTaGAAACTGGGGAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIRYERS*KLGRIV
Trigger: GACAATTCTCCCCAGTTTTCAAGATCTCTCATACCT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGAGACACATGACTGCTaGAGGAATATACAATTTTCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHETHDC*RNIQFS
Trigger: GGAAAATTGTATATTCCTTCAGCAGTCATGTGTCTC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTTTGGGAGACACATaGCTGCTGAAGGAATATACA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHILGDT*LLKEYT
Trigger: TGTATATTCCTTCAGCAGTCATGTGTCTCCCAAAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCATAATCCACTTGCTTaGAAAGAGTCAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHHNPLA*KESNVL
Trigger: GAGGACATTTGACTCTTTTCAAGCAAGTGGATTATG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCTTGTCCTGAACTCTaGCCAAAGCAACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPCPEL*PKQQMY
Trigger: ATACATTTGTTGCTTTGGTCAGAGTTCAGGACAAGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCATGATCAAAGATTCTaGGGGCATAGATGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYHDQRF*GHRWLH
Trigger: ATGGAGCCATCTATGCCCTCAGAATCTTTGATCATG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCTTCTACCACAAAAGTaGTCTGACTCACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHLLPQK*SDSLLH
Trigger: ATGAAGAAGTGAGTCAGATCACTTTTGTGGTAGAAG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGTATGGATGTCACATaGTCGTGGATCAATTATGAA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGMDVT*SWINYE
Trigger: TTCATAATTGATCCACGATCATGTGACATCCATACC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTCCTGAATGATAACTaGCAGCTCCCATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVLNDN*QLPFCV
Trigger: TACACAGAATGGGAGCTGTCAGTTATCATTCAGGAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTCTGGCGGACATCTTaGAGCAGTTTGTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLWRTS*SSLLIS
Trigger: AGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGACCACTATGAGTTCTaGATACTTGGCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYDHYEF*ILGSIS
Trigger: ACTGATGGAGCCAAGTATGCAGAACTCATAGTGGTC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGAGTCTCTGTCAATTaGCCTTATTCTTGTGACATG +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRVSVN*PYSCDM
Trigger: CATGTCACAAGAATAAGGGCAATTGACAGAGACTCT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAGAGTCTCATAGCTaGTGGAATTCTTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAESHS*WNSSIC
Trigger: ACAGATGGAAGAATTCCAGCAGCTATGAGACTCTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGAAGGGCCTGCTGCATaGCAAGCTTTTGAACAAATA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYEGPAA*QAFEQI
Trigger: TATTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTTGCCCAGTACATCGTaGTTGAAAGATACTATCAGA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHLPSTS*LKDTIR
Trigger: TCTGATAGTATCTTTCAACCACGATGTACTGGGCAA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGTTCAAGTTTTTCTaGCACAGTTGTTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQFKFF*HSCSRS
Trigger: TGACCGTGAACAACTGTGCCAGAAAAACTTGAACTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTTTCCCCAACATCTaGATCAAATGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIFPNI*IKCTVQ
Trigger: CTGGACAGTGCATTTGATCCAGATGTTGGGGAAAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGGGCTGTTGTCATTaGAGTCTGAAATGCTTATTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQGCCH*SLKCLF
Trigger: AAATAAGCATTTCAGACTCCAATGACAACAGCCCTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCTCTGGAAGTGGGGTaGATTGTCATTGATATCATT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSLEVG*IVIDII
Trigger: AATGATATCAATGACAATCCACCCCACTTCCAGAGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGATGGCTCCATTAGATaGGTCAATGGTTACATATGT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHDGSIR*VNGYIC
Trigger: ACATATGTAACCATTGACCCATCTAATGGAGCCATC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAAATTCTCTGGCACGTaGTTTGATGAGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIKFSGT*FDEIVT
Trigger: GGTGACAATCTCATCAAACCACGTGCCAGAGAATTT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTTTCCTCGAAAACTTaGTCTTGGCTGATATTGCCC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVSSKT*SWLILP
Trigger: GGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAACAGCCTATCTATTaGAGAATCTCGCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQQPIY*RISPQI
Trigger: GATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGAGTCTCATAGCTGCTaGAATTCTTCCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYESHSC*NSSICE
Trigger: CTCACAGATGGAAGAATTCCAGCAGCTATGAGACTC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGGGAATTCTTCCCCTaGAATGAACATGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIWEFFP*NEHVTP
Trigger: AGGAGTAACATGTTCATTCCAGGGGAAGAATTCCCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTTCCCATCATTGAGGTaGTTGAGCACATTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHFPSLR*LSTLSK
Trigger: TTTTGACAATGTGCTCAACCACCTCAATGATGGGAA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCTACATTTGGTACTTaGAACTTGAAAGCGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIATFGT*NLKASL
Trigger: AAGAGACGCTTTCAAGTTTCAAGTACCAAATGTAGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCAGTACATCGTGGTTaGAAGATACTATCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPVHRG*KILSEV
Trigger: CACTTCTGATAGTATCTTTCAACCACGATGTACTGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGGTATGAGAGATCTTaGAAACTGGGGAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYRYERS*KLGRIV
Trigger: GACAATTCTCCCCAGTTTTCAAGATCTCTCATACCT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTTTGGGAGACACATaGCTGCTGAAGGAATATACA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIILGDT*LLKEYT
Trigger: TGTATATTCCTTCAGCAGTCATGTGTCTCCCAAAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCTCATAGGATTTGGTaGTTTCATAATCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSHRIW*FHNPLA
Trigger: AGCAAGTGGATTATGAAATCACCAAATCCTATGAGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCTTGTCCTGAACTCTaGCCAAAGCAACAAATGTAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPCPEL*PKQQMY
Trigger: ATACATTTGTTGCTTTGGTCAGAGTTCAGGACAAGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTTCTACCACAAAAGTaGTCTGACTCACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILLPQK*SDSLLH
Trigger: ATGAAGAAGTGAGTCAGATCACTTTTGTGGTAGAAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTTGCCCTTATTCTTGTaGCATGAAAGCCACTTTCAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLPLFL*HESHFQ
Trigger: CTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGTATGGATGTCACATaGTCGTGGATCAATTATGAA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGMDVT*SWINYE
Trigger: TTCATAATTGATCCACGATCATGTGACATCCATACC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTCTTCCCCTGGAATaGACATGTTACTCCTATAAT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHILPLE*TCYSYN
Trigger: ATTATAGGAGTAACATGTTCATTCCAGGGGAAGAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCTTCCTCCATCTCTTaGTTCTACCACAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYASSIS*FYHKSD
Trigger: ATCACTTTTGTGGTAGAAGCAAGAGATGGAGGAAGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGGAATGGTGATTTCTaGCGTATTATTACGCAATGC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGNGDF*RIITQC
Trigger: GCATTGCGTAATAATACGGCAGAAATCACCATTCCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCAACTATTTGGCAATaGCAGTTCTTTCAGGGTTTT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIATIWQ*QFFQGF
Trigger: AAAACCCTGAAAGAACTGGCATTGCCAAATAGTTGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGTTCAAGTTTTTCTaGCACAGTTGTTCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQFKFF*HSCSRS
Trigger: TGACCGTGAACAACTGTGCCAGAAAAACTTGAACTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACTTCAACTTCAATATaGAAAAGCTGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTSTSI*KSCRCS
Trigger: AGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGCTTATTTTTAGTATaGATGAGCCAGACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICLFLV*MSQTSE
Trigger: CTCAGAGGTCTGGCTCATCCATACTAAAAATAAGCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGATGGCTCCATTAGATaGGTCAATGGTTACATATGT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIDGSIR*VNGYIC
Trigger: ACATATGTAACCATTGACCCATCTAATGGAGCCATC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACTTCAGAAGGACTTTaGTATGTAGCTGAGGATTGC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTSEGL*YVAEDC
Trigger: GCAATCCTCAGCTACATACCAAAGTCCTTCTGAAGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAAATTCTCTGGCACGTaGTTTGATGAGATTGTCACC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYKFSGT*FDEIVT
Trigger: GGTGACAATCTCATCAAACCACGTGCCAGAGAATTT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGATTCCATTTCCTTaGAGCATGTTTCATACTACA +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQIPFP*SMFHTT
Trigger: TGTAGTATGAAACATGCTCCAAGGAAATGGAATCTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTACTTCAACTTCAATATaGAAAAGCTGCAGATGCTCG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGITSTSI*KSCRCS
Trigger: CGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGAGACACATGACTGCTaGAGGAATATACAATTTTCC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYETHDC*RNIQFS
Trigger: GGAAAATTGTATATTCCTTCAGCAGTCATGTGTCTC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATTTTGGGAGACACATaGCTGCTGAAGGAATATACA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYILGDT*LLKEYT
Trigger: TGTATATTCCTTCAGCAGTCATGTGTCTCCCAAAAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCATAATCCACTTGCTTaGAAAGAGTCAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYHNPLA*KESNVL
Trigger: GAGGACATTTGACTCTTTTCAAGCAAGTGGATTATG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCTCATAGGATTTGGTaGTTTCATAATCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISHRIW*FHNPLA
Trigger: AGCAAGTGGATTATGAAATCACCAAATCCTATGAGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTTCTACCACAAAAGTaGTCTGACTCACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLLPQK*SDSLLH
Trigger: ATGAAGAAGTGAGTCAGATCACTTTTGTGGTAGAAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGTATGGATGTCACATaGTCGTGGATCAATTATGAA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGMDVT*SWINYE
Trigger: TTCATAATTGATCCACGATCATGTGACATCCATACC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTCTTCCCCTGGAATaGACATGTTACTCCTATAAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIILPLE*TCYSYN
Trigger: ATTATAGGAGTAACATGTTCATTCCAGGGGAAGAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAATGTTCAAGTATTGTaGGAGGAAAGGGGAGATTCA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYNVQVL*EERGDS
Trigger: TGAATCTCCCCTTTCCTCTCACAATACTTGAACATT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTCATTTGGTGCATTaGTCAGTTTATGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIHLVH*SVYEIS
Trigger: GGAAATCTCATAAACTGACCAATGCACCAAATGAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTGCTTATTTTTAGTATaGATGAGCCAGACCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYCLFLV*MSQTSE
Trigger: CTCAGAGGTCTGGCTCATCCATACTAAAAATAAGCA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTCTCTGGAAGTGGGGTaGATTGTCATTGATATCATT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSLEVG*IVIDII
Trigger: AATGATATCAATGACAATCCACCCCACTTCCAGAGA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGATGGCTCCATTAGATaGGTCAATGGTTACATATGT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYDGSIR*VNGYIC
Trigger: ACATATGTAACCATTGACCCATCTAATGGAGCCATC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGTCCTTTCCAAAGGTaGAAAAACTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSPFQR*KNSSSF
Trigger: AAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGATTCCATTTCCTTaGAGCATGTTTCATACTACA +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQIPFP*SMFHTT
Trigger: TGTAGTATGAAACATGCTCCAAGGAAATGGAATCTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR TCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATTCTTCCCCTGGAATaGACATGTTACTCCTATAAT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYILPLE*TCYSYN
Trigger: ATTATAGGAGTAACATGTTCATTCCAGGGGAAGAAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTCATTTGGTGCATTaGTCAGTTTATGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIHLVH*SVYEIS
Trigger: GGAAATCTCATAAACTGACCAATGCACCAAATGAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACTTCAACTTCAATATaGAAAAGCTGCAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTSTSI*KSCRCS
Trigger: AGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATAAATGCAACTATTTaGCAATGCCAGTTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIINATI*QCQFFQ
Trigger: CTGAAAGAACTGGCATTGCCAAATAGTTGCATTTAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATCAGATTTGAACAGTaGCTAGTTTCTACACGACTA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYIRFEQ*LVSTRL
Trigger: TAGTCGTGTAGAAACTAGCCACTGTTCAAATCTGAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGCCTTTACACTTTGTaGTTGAATAGTGTATCAGAT +
Preference number: 4 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICLYTL*LNSVSD
Trigger: ATCTGATACACTATTCAACCACAAAGTGTAAAGGCA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGATTCCATTTCCTTaGAGCATGTTTCATACTACA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQIPFP*SMFHTT
Trigger: TGTAGTATGAAACATGCTCCAAGGAAATGGAATCTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR GCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGCTTCCCATATTACTaGTGGTGCTTTAAATTAAGA +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSFPYY*WCFKLR
Trigger: TCTTAATTTAAAGCACCAGCAGTAATATGGGAAGCT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGTCCTTTCCAAAGGTaGAAAAACTCTTCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSPFQR*KNSSSF
Trigger: AAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CCA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTATGAGATCATGCACTaGAGACAAAAGCTAAAAATG +
Preference number: 4 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYYEIMH*RQKLKM
Trigger: CATTTTTAGCTTTTGTCTCCAGTGCATGATCTCATA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 90 bp GGCTGCCCATGCCGCTACCCCCTGTGGGTAACCCACAGTTTTGGCTaGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTGGACCGATCCAC +
Preference number: 5 (lower is better)
Translates to: GCPCRYPLWVTHSFG*QGSLPALQGVGPIH
Trigger: GTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCATGGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 90 bp TACTGGCTGCCCATGCCGCTACCCCCTGTGGGTAACCCACAGTTTTaGCTGGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTGGACCGAT +
Preference number: 5 (lower is better)
Translates to: YWLPMPLPPVGNPQF*LARVPSCAPGSWTD
Trigger: ATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCATGGGCAGCCAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS GCA 90 bp AGGGTCCCTTCCTGCGCTCCAGGGAGTTGGACCGATCCACCTCACTaGATTCAGAATAGGTGTCCAGGGAAGGCGGTAAGAGACGCTGGA +
Preference number: 5 (lower is better)
Translates to: RVPSCAPGSWTDPPH*IQNRCPGKAVRDAG
Trigger: TCCAGCGTCTCTTACCGCCTTCCCTGGACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS GCA 90 bp CCCCCTGTGGGTAACCCACAGTTTTGGCTGGCAAGGGTCCCTTCCTaGGCTCCAGGGAGTTGGACCGATCCACCTCACTGCATTCAGAAT +
Preference number: 5 (lower is better)
Translates to: PPVGNPQFWLARVPS*APGSWTDPPHCIQN
Trigger: ATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 90 bp CCACAGTTTTGGCTGGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTaGACCGATCCACCTCACTGCATTCAGAATAGGTGTCCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: PQFWLARVPSCAPGS*TDPPHCIQNRCPGK
Trigger: CTTCCCTGGACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 90 bp AAGGCTGCACACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTGGTaGTGGGATTTTGAAAATGCGTACTGGCTGCCCATGCCGCTACCC +
Preference number: 5 (lower is better)
Translates to: KAAHWSEFQVAAHSW*WDFENAYWLPMPLP
Trigger: GGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACTGCGCTCCAGGGAGTaGGACCGATCCACCTCACTG +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKLRSRE*DRSTSL
Trigger: CAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS CCA 90 bp GACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTGCGTTTGTTTaGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTCACCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: DFQIPSAWSPVLAFV*SFVLFPGRRVSPPR
Trigger: ACGCGGAGGTGACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CCA 90 bp AAGAAGGCTGCACACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTaGTGGTGGGATTTTGAAAATGCGTACTGGCTGCCCATGCCGCTA +
Preference number: 5 (lower is better)
Translates to: KKAAHWSEFQVAAHS*WWDFENAYWLPMPL
Trigger: TAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTGTGCAGCCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS GCA 90 bp ACCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: TVSRLPDTFGMESSP*VCLVVRPLSRQESV
Trigger: GACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000511115.5
ENST00000611581.1
CDS GCA 90 bp CTCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: LVSRLPDTFGMESSP*VCLVVRPLSRQESV
Trigger: GACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS-3UTR CAA 90 bp GCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATGATGTGCGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCG +
Preference number: 5 (lower is better)
Translates to: AVRDAGTHCSFPRAEMMCAPGEA*KEAERP
Trigger: CGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGC...GCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS TCA 90 bp GTATGGATGAGCCAGACCTCTGAGGTACTCCCATGTCTGAGGCAGTaGGCTGAAGCTCGTAGCTTGACTTCAGCTCCCGATCTAACTCTC +
Preference number: 5 (lower is better)
Translates to: VWMSQTSEVLPCLRQ*AEARSLTSAPDLTL
Trigger: GAGAGTTAGATCGGGAGCTGAAGTCAAGCTACGAGCTTCAGCTCACTGCCTCAGACATGGGAGTACCTCAGAGGTCTGGCTCATCCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp CAGAATAGGTGTCCAGGGAAGGCGGTAAGAGACGCTGGAACACACTaGTCATTTCCGAGAGCAGAGATGATGTGCTGGTATCCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: QNRCPGKAVRDAGTH*SFPRAEMMCWYPQC
Trigger: ACACTGGGGATACCAGCACATCATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCTGGACACCTATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS GCA 90 bp TTCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: FVSRLPDTFGMESSP*VCLVVRPLSRQESV
Trigger: GACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510305.5
CDS CCA 90 bp CCCATCTGCCCTCTTTCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTCCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: PICPLSCHDFQIPSA*SPVLAFVWSFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAAAGAGGGCAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510305.5
CDS-3UTR CAA 90 bp AGGGAAGGCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: REGGKRRWNTLLISESRDHGVQS*RLFGRS
Trigger: CGAACGACCAAACAAACGCAAGGACTGGACTCCATG...ATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCTGAAGCTCGTAGCTaGACTTCAGCTCCCGATCTA +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKAEARS*TSAPDL
Trigger: TAGATCGGGAGCTGAAGTCAAGCTACGAGCTTCAGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp CCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTGCTGCTGGGGTTGCGTaGGGAATTCTTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: PSVLIVWGVLSKGGKTLLAAGVA*GILPLE
Trigger: TTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC...AAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp TGCTGGTATCCCCAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAACAGTGTCCTCATCGTTaGGGGAGTCCTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: CWYPQCPHRLGSPFQRWKQCPHR*GSPFQR
Trigger: CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG...TTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTGGGGATACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS CCA 90 bp AAAAGCTGCAGATGCTCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTCCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KSCRCSCHDFQIPSA*SPVLAFVWSFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAGCATCTGCAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS CCA 90 bp AAAGAAGCTGAGAGACCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTCCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KEAERPCHDFQIPSA*SPVLAFVWSFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTCTCTCAGCTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511115.5
ENST00000611581.1
CDS-3UTR CAA 90 bp AGGGAAGGCGGTAAGAGACGCTGGAACACACTGCTCATTTCCGAGAGCAGAGATCCAACAGCCTATCTATaGGAGAATCTCGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: REGGKRRWNTLLISESRDPTAYL*ENLAPN
Trigger: ATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGG...ATCTCTGCTCTCGGAAATGAGCAGTGTGTTCCAGCGTCTCTTACCGCCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp GAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCATGCTGCTGCTGGGGTaGCGTTGGGAATTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ESFPKVEKLFFFSPESAGMLLLG*RWEFFP
Trigger: GGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCAT...GCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGTTGGTGGTGGGATTTaGAAAATGCGTACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKVGGGI*KMRTGC
Trigger: GCAGCCAGTACGCATTTTCAAAATCCCACCACCAAC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp GTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTGTCGGAATCCATCTATaGCAGGGTGCCGGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: VSSSFGESFPKVEKLFFFVGIHL*QGAGGV
Trigger: GACTCCACCGGCACCCTGCAATAGATGGATTCCGAC...AAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGGCTTACTGAAGTCATaGCTGTACTTGTCACCGACT +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKGLLKS*LYLSPT
Trigger: AGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACCAACAGCCTATCTATaGGAGAATCTCGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKPTAYL*ENLAPN
Trigger: ATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAGCTCTGGCGGACATCTaGAAGCAGTTTGTTAATCTC +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKALADI*KQFVNL
Trigger: GAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGC...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS TCA 90 bp TTTGTGAATCTGCCGGGATGGCCTTTTTGGGTGGTGCTGGTAAGTTaGTTCGGCCACCCTGCAGTTATAGGATCTAGTGTCTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FVNLPGWPFWVVLVS*FGHPAVIGSSVFLL
Trigger: GAGAAGAAAGACACTAGATCCTATAACTGCAGGGTGGCCGAATCAACTTACCAGCACCACCCAAAAAGGCCATCCCGGCAGATTCACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp TATGGCGCAGCTGAGTTCAGCATTCACACCAGAGTCTCTGTCAATTaGCCTTATTCTTGTGACATGAAAGCCACTTTCAGCCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: YGAAEFSIHTRVSVN*PYSCDMKATFSPFG
Trigger: CCCAAAGGGGCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTGAATGCTGAACTCAGCTGCGCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp TTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTGTCCAGTCCTTGCGTTaGTTTGGTCGTTCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: FQRWKNSSSFHRNLQAERVQSLR*FGRSSS
Trigger: AGAGGACGAACGACCAAACAAACGCAAGGACTGGAC...ACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACATCCTCTGATAGTCTaGCAATTACTGATCCAACCC +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKHPLIV*QLLIQP
Trigger: GGGTTGGATCAGTAATTGCAAGACTATCAGAGGATG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATCCATTGTGTTTTTCTaGTTCGCCCAGCCAACTGAA +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKSIVFF*FAQPTE
Trigger: TTCAGTTGGCTGGGCGAACAAGAAAAACACAATGGA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS TCA 90 bp TTGAAAGAAGCTGAGAGACCTGCTCAACAGCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCTCTGGCACGTGGTTTGATGAGATTG +
Preference number: 5 (lower is better)
Translates to: LKEAERPAQQQEWRG*VLMRNSLARGLMRL
Trigger: CAATCTCATCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGCCACTCCTGCTGTTGAGCAGGTCTCTCAGCTTCTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000510305.5
CDS TCA 90 bp GCATTGAAAGAAGCTGAGAGACCTCAACAGCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCTCTGGCACGTGGTTTGATGAGATTG +
Preference number: 5 (lower is better)
Translates to: ALKEAERPQQQEWRG*VLMRNSLARGLMRL
Trigger: CAATCTCATCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGCCACTCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS CCA 90 bp TTTGTTTTATACACACCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTCCTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FVLYTPCHDFQIPSA*SPVLAFVWSFVLFP
Trigger: TGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTGTGTATAAAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CCA 90 bp TGTGAGAAACAGGTCGCTGAATCCTTCACCCAACAGCCTATCTATTaGAGAATCTCGCCCCAAATCATAATCACTGTCTCCTGCCTCACT +
Preference number: 5 (lower is better)
Translates to: CEKQVAESFTQQPIY*RISPQIIITVSCLT
Trigger: AGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGGGTGAAGGATTCAGCGACCTGTTTCTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
ENST00000620262.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACCCAGTACATCGTGGTaGAAAGATACTATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKPSTSW*KDTIRS
Trigger: ACTTCTGATAGTATCTTTCAACCACGATGTACTGGG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACCAGGGGACATGAGGTaGATGTTAATTTCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKPGDMR*MLISGL
Trigger: TAAACCTGAAATTAACATCAACCTCATGTCCCCTGG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAAGGTGGTTGAGCACATaGTCAAAATCATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKRWLST*SKSSSS
Trigger: TGAGGAAGATGATTTTGACAATGTGCTCAACCACCT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS TCA 90 bp GCATTCACACCAGAGTCTCTGTCAATTGCCCTTATTCTTGTGACATaGAAGCCACTTTCAGCCCCTTTGGGAATGGTGATTTCTGCCGTA +
Preference number: 5 (lower is better)
Translates to: AFTPESLSIALILVT*KPLSAPLGMVISAV
Trigger: TACGGCAGAAATCACCATTCCCAAAGGGGCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp CCTATCTATTGGAGAATCTCGCCCCAAATCATAATCACTGTCTCCTaGCTCACTGTCACCACGGCCACTGTCTTTCAAGCTAAATTTGTC +
Preference number: 5 (lower is better)
Translates to: PIYWRISPQIIITVS*LTVTTATVFQAKFV
Trigger: GACAAATTTAGCTTGAAAGACAGTGGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
ENST00000620262.1
CDS GCA 90 bp AATCTCCTAGCTCTGGCGGACATCTTGAAGCAGTTTGTTAATCTCTaGCACCAGTTCACTGGCATCCATGAGTTCGTGTTTCCCATCATT +
Preference number: 5 (lower is better)
Translates to: NLLALADILKQFVNL*HQFTGIHEFVFPII
Trigger: AATGATGGGAAACACGAACTCATGGATGCCAGTGAACTGGTGGCAGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGCTAGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTCGGAATCCATCTATaGCAGGGTGCCGGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVGIHL*QGAGGV
Trigger: GACTCCACCGGCACCCTGCAATAGATGGATTCCGAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: VSSSFGESFPKVEKLFFFSPCVC*VVRPLS
Trigger: GGAAAGAGGACGAACGACCAAACAAACGCAAGGACT...AAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATGGAAGTGGGGTGGATaGTCATTGATATCATTGATT +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKWKWGG*SLISLI
Trigger: AATCAATGATATCAATGACAATCCACCCCACTTCCA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAAATAACCACAGGAACGTaGTCATTTTCGTCAATGATG +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKITTGT*SFSSMM
Trigger: CATCATTGACGAAAATGACAACGTTCCTGTGGTTAT...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGTGGTGCTGGTAAGTaGATTCGGCCACCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGGAGK*IRPPCS
Trigger: ACTGCAGGGTGGCCGAATCAACTTACCAGCACCACC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCCGGGATGGCCTTTTaGGGTGGTGCTGGTAAGTTG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAGMAF*GGAGKL
Trigger: CAACTTACCAGCACCACCCAAAAAGGCCATCCCGGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTTCTCGAAAACTTGGTCTaGGCTGATATTGCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: VSSSFGESFPKVEKLFFFLENLV*ADIAPG
Trigger: ACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAG...AAAGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCTGCTGGGGTTGCGTaGGGAATTCTTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAAGVA*GILPLE
Trigger: TTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATGCTGCTGCTGGGGTaGCGTTGGGAATTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHMLLLG*RWEFFP
Trigger: GGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTGCGCTCCAGGGAGTaGGACCGATCCACCTCACTG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLRSRE*DRSTSL
Trigger: CAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAACTGCATGCCAAGCTTTaGAACAAATATGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKLHAKL*NKYVGT
Trigger: TGTTCCTACATATTTGTTCAAAAGCTTGGCATGCAG...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS GCA 90 bp TTTTCGTCAATGATGGTGAGCACAACTGTGGTATTGCTTACCAGTTaGTTCGGGCTTCCTCCATCTCTTGCTTCTACCACAAAAGTGATC +
Preference number: 5 (lower is better)
Translates to: FSSMMVSTTVVLLTS*FGLPPSLASTTKVI
Trigger: GATCACTTTTGTGGTAGAAGCAAGAGATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCTCACCATCATTGACGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTCGGAATCCATCTATaGCAGGGTGCCGGTGGAGTC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVGIHL*QGAGGV
Trigger: GACTCCACCGGCACCCTGCAATAGATGGATTCCGAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp ACACTGAATCACCCGCTCAGGAAGGGCCTGCTGCATGCCAAGCTTTTGAACAAATTGTATTATATAAGATaGCTGCTCAAAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TLNHPLRKGLLHAKLLNKLYYIR*LLKSRA
Trigger: AGCCCTGCTTTTGAGCAGCAATCTTATATAATACAA...TTTGTTCAAAAGCTTGGCATGCAGCAGGCCCTTCCTGAGCGGGTGATTCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCCGGGATGGCCTTTTaGGGTGGTGCTGGTAAGTTG +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAGMAF*GGAGKL
Trigger: CAACTTACCAGCACCACCCAAAAAGGCCATCCCGGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CAGTGTCCTCATCGTTTGGGGAGTCCTTTCCAAAGGTGGAAAAACTCTTCTTCTTGTTTCCTCGAAAACTaGGTCTTGGCTGATATTGCC +
Preference number: 5 (lower is better)
Translates to: QCPHRLGSPFQRWKNSSSCFLEN*VLADIA
Trigger: GGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACA...AGAAGAAGAGTTTTTCCACCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCTGCTGGGGTTGCGTaGGGAATTCTTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAAGVA*GILPLE
Trigger: TTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp TTCAGCCCCTTTGGGAATGGTGATTTCTGCCGTATTATTACGCAATaGAGGCCCTATAACCACAGGAACGTTGTCATTTTCGTCAATGAT +
Preference number: 5 (lower is better)
Translates to: FSPFGNGDFCRIITQ*RPYNHRNVVIFVND
Trigger: ATCATTGACGAAAATGACAACGTTCCTGTGGTTATAGGGCCTGCATTGCGTAATAATACGGCAGAAATCACCATTCCCAAAGGGGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTCCAGTCCTTGCGTTaGTTTGGTCGTTCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVQSLR*FGRSSS
Trigger: AGAGGACGAACGACCAAACAAACGCAAGGACTGGAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHHGVQS*RLFGRS
Trigger: CGAACGACCAAACAAACGCAAGGACTGGACTCCATG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCTGAAGCTCGTAGCTaGACTTCAGCTCCCGATCTA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAEARS*TSAPDL
Trigger: TAGATCGGGAGCTGAAGTCAAGCTACGAGCTTCAGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGTATTGCTTACCAGTaGCTTCGGGCTTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGIAYQ*LRASSI
Trigger: GATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGTGGTGCTGGTAAGTaGATTCGGCCACCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGGAGK*IRPPCS
Trigger: ACTGCAGGGTGGCCGAATCAACTTACCAGCACCACC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCTGCTGGGGTTGCGTaGGGAATTCTTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAAGVA*GILPLE
Trigger: TTCCAGGGGAAGAATTCCCAACGCAACCCCAGCAGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATGCTGCTGCTGGGGTaGCGTTGGGAATTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYMLLLG*RWEFFP
Trigger: GGGGAAGAATTCCCAACGCAACCCCAGCAGCAGCAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGTGTCCTCATCGTTaGGGGAGTCCTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQCPHR*GSPFQR
Trigger: CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp TCCCCATTATCCTCGTTTACTACAAGTAGAGGAGAATTTCCCCTCTaGATGGCTCGAAATCGAACAGTAGAAGGATTAGGAAGCTTCAAT +
Preference number: 5 (lower is better)
Translates to: SPLSSFTTSRGEFPL*MARNRTVEGLGSFN
Trigger: ATTGAAGCTTCCTAATCCTTCTACTGTTCGATTTCGAGCCATGCAGAGGGGAAATTCTCCTCTACTTGTAGTAAACGAGGATAATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CCA 90 bp GGTAGAGTGATCACATCAAACTCTATGGAACAGTTCAAGTTTTTCTaGCACAGTTGTTCACGGTCAATTGTAGCCCCTATGCTGATTTCC +
Preference number: 5 (lower is better)
Translates to: GRVITSNSMEQFKFF*HSCSRSIVAPMLIS
Trigger: GGAAATCAGCATAGGGGCTACAATTGACCGTGAACAACTGTGCCAGAAAAACTTGAACTGTTCCATAGAGTTTGATGTGATCACTCTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCCGCGTTTTCTCCCTaGTGTAGTCGGAATCCATCT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSAFSP*CSRNPS
Trigger: AGATGGATTCCGACTACACAAGGGAGAAAACGCGGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSPCVC*VVRPLS
Trigger: GGAAAGAGGACGAACGACCAAACAAACGCAAGGACT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATGAGTTCTGCATACTaGGCTCCATCAGTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHMSSAY*APSVLV
Trigger: GACCAGGACTGATGGAGCCAAGTATGCAGAACTCAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCTGAAGCTCGTAGCTaGACTTCAGCTCCCGATCTA +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAEARS*TSAPDL
Trigger: TAGATCGGGAGCTGAAGTCAAGCTACGAGCTTCAGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGGGCTGGGATTGAATTaGGACCCAAATCTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHGLGLN*DPNLEP
Trigger: AGGCTCAAGATTTGGGTCCAAATTCAATCCCAGCCC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGTATTGCTTACCAGTaGCTTCGGGCTTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGIAYQ*LRASSI
Trigger: GATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGCACAACTGTGGTATaGCTTACCAGTTGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSTTVV*LTSCFG
Trigger: CCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCACTTTCAGCCCCTTaGGGAATGGTGATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPLSAP*GMVISA
Trigger: GGCAGAAATCACCATTCCCAAAGGGGCTGAAAGTGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIAPGEA*KEAERP
Trigger: AGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp TTCCAAAGGTGGAAAAACTCTTCTTCTTTTCACCGGAATCTGCAGGCTGAGCGTAAATTTGTCCATGTCTaGAAGGGCATATCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: FQRWKNSSSFHRNLQAERKFVHV*KGISVA
Trigger: AGCTACAGATATGCCCTTCAAGACATGGACAAATTT...ACGCTCAGCCTGCAGATTCCGGTGAAAAGAAGAAGAGTTTTTCCACCTTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611581.1
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCAGTGTCCTCATCGTTaGGGGAGTCCTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIQCPHR*GSPFQR
Trigger: CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTTGGTGGTGGGATTTaGAAAATGCGTACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVGGGI*KMRTGC
Trigger: GCAGCCAGTACGCATTTTCAAAATCCCACCACCAAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp AAGTCATTGCTGTACTTGTCACCGACTCTGCATATTCAAAGATCATaGACTTCAGAAGGACTTTGGTATGTAGCTGAGGATTGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KSLLYLSPTLHIQRS*TSEGLWYVAEDCLC
Trigger: ACAAAGGCAATCCTCAGCTACATACCAAAGTCCTTCTGAAGTGCATGATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCCGCGTTTTCTCCCTaGTGTAGTCGGAATCCATCT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISAFSP*CSRNPS
Trigger: AGATGGATTCCGACTACACAAGGGAGAAAACGCGGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISPCVC*VVRPLS
Trigger: GGAAAGAGGACGAACGACCAAACAAACGCAAGGACT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTCCAGTCCTTGCGTTaGTTTGGTCGTTCGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVQSLR*FGRSSS
Trigger: AGAGGACGAACGACCAAACAAACGCAAGGACTGGAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYHGVQS*RLFGRS
Trigger: CGAACGACCAAACAAACGCAAGGACTGGACTCCATG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGTATTGCTTACCAGTaGCTTCGGGCTTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGIAYQ*LRASSI
Trigger: GATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCTCTGGCACGTGGTTaGATGAGATTGTCACCAAAC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSLARG*MRLSPN
Trigger: GTTTGGTGACAATCTCATCAAACCACGTGCCAGAGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAPGEA*KEAERP
Trigger: AGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCTCGAAAACTTGGTCTaGGCTGATATTGCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILENLV*ADIAPG
Trigger: ACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCAACAGCCTATCTATaGGAGAATCTCGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPTAYL*ENLAPN
Trigger: ATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCAGTGTCCTCATCGTTaGGGGAGTCCTTTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYQCPHR*GSPFQR
Trigger: CCTTTGGAAAGGACTCCCCAAACGATGAGGACACTG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTCGTGTTTCCCATCATaGAGGTGGTTGAGCACATTG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHSCFPS*RWLSTL
Trigger: CAATGTGCTCAACCACCTCAATGATGGGAAACACGA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCTCTGGCGGACATCTaGAAGCAGTTTGTTAATCTC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHALADI*KQFVNL
Trigger: GAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS TCA 90 bp CTTCAACTTCAATATGGAAAAGCTGCAGATGCTCTGTGGGTAGAGTaGTCACATCAAACTCTATGGAACAGTTCAAGTTTTTCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LQLQYGKAADALWVE*SHQTLWNSSSFSGT
Trigger: TGTGCCAGAAAAACTTGAACTGTTCCATAGAGTTTGATGTGATCACTCTACCCACAGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS TCA 90 bp TGTGTAGGGAACAGAATCCATGCTAACGTTGGTATGGATGTCACATaGTCGTGGATCAATTATGAAGATATTCTCCTCATTACCTGCTAC +
Preference number: 5 (lower is better)
Translates to: CVGNRIHANVGMDVT*SWINYEDILLITCY
Trigger: GTAGCAGGTAATGAGGAGAATATCTTCATAATTGATCCACGATCATGTGACATCCATACCAACGTTAGCATGGATTCTGTTCCCTACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSPCVC*VVRPLS
Trigger: GGAAAGAGGACGAACGACCAAACAAACGCAAGGACT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGTTTTTCTGGCACAGTaGTTCACGGTCAATTGTAGC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHVFLAQ*FTVNCS
Trigger: GCTACAATTGACCGTGAACAACTGTGCCAGAAAAAC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATGAGTTCTGCATACTaGGCTCCATCAGTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYMSSAY*APSVLV
Trigger: GACCAGGACTGATGGAGCCAAGTATGCAGAACTCAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGCAGGGCTGTTGTCATaGGAGTCTGAAATGCTTATT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHAGLLS*ESEMLI
Trigger: AATAAGCATTTCAGACTCCAATGACAACAGCCCTGC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAGCACAACTGTGGTATaGCTTACCAGTTGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSTTVV*LTSCFG
Trigger: CCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGGCTTACTGAAGTCATaGCTGTACTTGTCACCGACT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIGLLKS*LYLSPT
Trigger: AGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCTCTGGCACGTGGTTaGATGAGATTGTCACCAAAC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISLARG*MRLSPN
Trigger: GTTTGGTGACAATCTCATCAAACCACGTGCCAGAGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTCGAAAACTTGGTCTaGGCTGATATTGCCCCTGGT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLENLV*ADIAPG
Trigger: ACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGTTTCCTCGAAAACTaGGTCTTGGCTGATATTGCC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHCFLEN*VLADIA
Trigger: GGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGTTGGTGGTGGGATTTaGAAAATGCGTACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYVGGGI*KMRTGC
Trigger: GCAGCCAGTACGCATTTTCAAAATCCCACCACCAAC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTCGTGTTTCCCATCATaGAGGTGGTTGAGCACATTG +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGISCFPS*RWLSTL
Trigger: CAATGTGCTCAACCACCTCAATGATGGGAAACACGA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS TCA 90 bp GGAAATAATTATTATCATGGAGACATCCAAGGATGCCTGGCTTACTaGAGTCATTGCTGTACTTGTCACCGACTCTGCATATTCAAAGAT +
Preference number: 5 (lower is better)
Translates to: GNNYYHGDIQGCLAY*SHCCTCHRLCIFKD
Trigger: ATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCATGATAATAATTATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp TCATTAATATCCAGCACTTCAACTTCAATATGGAAAAGCTGCAGATaGTCTGTGGGTAGAGTGATCACATCAAACTCTATGGAACAGTTC +
Preference number: 5 (lower is better)
Translates to: SLISSTSTSIWKSCR*SVGRVITSNSMEQF
Trigger: GAACTGTTCCATAGAGTTTGATGTGATCACTCTACCCACAGAGCATCTGCAGCTTTTCCATATTGAAGTTGAAGTGCTGGATATTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACACAGCTCGCAAACTTTaGTTTTATACACACCGTGTC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHTARKL*FYTHRV
Trigger: GACACGGTGTGTATAAAACAAAAGTTTGCGAGCTGT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAAAACAGCAAAGCAATaGCCTCAACTTCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHKTAKQ*PQLPLA
Trigger: TGCCAAAGGAAGTTGAGGCAATTGCTTTGCTGTTTT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCCAGTACATCGTGGTaGAAAGATACTATCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPSTSW*KDTIRS
Trigger: ACTTCTGATAGTATCTTTCAACCACGATGTACTGGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCTGTATTTCAAATTCTaGCCCAGTACATCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHLYFKF*PSTSWL
Trigger: CAACCACGATGTACTGGGCAAGAATTTGAAATACAG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCATCCTCTGATAGTCTaGCAATTACTGATCCAACCC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIHPLIV*QLLIQP
Trigger: GGGTTGGATCAGTAATTGCAAGACTATCAGAGGATG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTGTTTTTCTGGCACAGTaGTTCACGGTCAATTGTAGC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIVFLAQ*FTVNCS
Trigger: GCTACAATTGACCGTGAACAACTGTGCCAGAAAAAC...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACATTTGGACCCAAATCTaGAGCCTGAACATCAATCTC +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHIWTQI*SLNINL
Trigger: GAGATTGATGTTCAGGCTCAAGATTTGGGTCCAAAT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCAGGGGACATGAGGTaGATGTTAATTTCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPGDMR*MLISGL
Trigger: TAAACCTGAAATTAACATCAACCTCATGTCCCCTGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGAATCCATGCTAACGTaGGTATGGATGTCACATGAT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHESMLT*VWMSHD
Trigger: ATCATGTGACATCCATACCAACGTTAGCATGGATTC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAAGTCATTGCTGTACTaGTCACCGACTCTGCATATT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHKSLLY*SPTLHI
Trigger: AATATGCAGAGTCGGTGACAAGTACAGCAATGACTT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGCTTACTGAAGTCATaGCTGTACTTGTCACCGACT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGLLKS*LYLSPT
Trigger: AGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTCTCTGGCACGTGGTTaGATGAGATTGTCACCAAAC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSLARG*MRLSPN
Trigger: GTTTGGTGACAATCTCATCAAACCACGTGCCAGAGA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTGTTTCCTCGAAAACTaGGTCTTGGCTGATATTGCC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGICFLEN*VLADIA
Trigger: GGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCAACAGCCTATCTATaGGAGAATCTCGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPTAYL*ENLAPN
Trigger: ATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAGGTGGTTGAGCACATaGTCAAAATCATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHRWLST*SKSSSS
Trigger: TGAGGAAGATGATTTTGACAATGTGCTCAACCACCT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCCATCATTGAGGTGGTaGAGCACATTGTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHPSLRW*STLSKS
Trigger: TGATTTTGACAATGTGCTCAACCACCTCAATGATGG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACTCGTGTTTCCCATCATaGAGGTGGTTGAGCACATTG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYSCFPS*RWLSTL
Trigger: CAATGTGCTCAACCACCTCAATGATGGGAAACACGA...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCTCTGGCGGACATCTaGAAGCAGTTTGTTAATCTC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYALADI*KQFVNL
Trigger: GAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 90 bp GCTGCACTCTCAGATATCTCAATAGGTATGAGAGATCTTGAAAACTaGGGAGAATTGTCATTAATATCCAGCACTTCAACTTCAATATGG +
Preference number: 5 (lower is better)
Translates to: AALSDISIGMRDLEN*GELSLISSTSTSIW
Trigger: CCATATTGAAGTTGAAGTGCTGGATATTAATGACAATTCTCCCCAGTTTTCAAGATCTCTCATACCTATTGAGATATCTGAGAGTGCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 90 bp GTTGTATTATATAAGATTGCTGCTCAAAAGCAGGGCTGTTGTCATTaGAGTCTGAAATGCTTATTTTTAGTATGGATGAGCCAGACCTCT +
Preference number: 5 (lower is better)
Translates to: VVLYKIAAQKQGCCH*SLKCLFLVWMSQTS
Trigger: AGAGGTCTGGCTCATCCATACTAAAAATAAGCATTTCAGACTCCAATGACAACAGCCCTGCTTTTGAGCAGCAATCTTATATAATACAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGCAGGGCTGTTGTCATaGGAGTCTGAAATGCTTATT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYAGLLS*ESEMLI
Trigger: AATAAGCATTTCAGACTCCAATGACAACAGCCCTGC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATTTGGACCCAAATCTaGAGCCTGAACATCAATCTC +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIWTQI*SLNINL
Trigger: GAGATTGATGTTCAGGCTCAAGATTTGGGTCCAAAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACTGGAAGTGGGGTGGATaGTCATTGATATCATTGATT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHWKWGG*SLISLI
Trigger: AATCAATGATATCAATGACAATCCACCCCACTTCCA...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACAAATTTGTCCATGTCTaGAAGGGCATATCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHKFVHV*KGISVA
Trigger: AGCTACAGATATGCCCTTCAAGACATGGACAAATTT...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAGGTGGTTGAGCACATaGTCAAAATCATCTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIRWLST*SKSSSS
Trigger: TGAGGAAGATGATTTTGACAATGTGCTCAACCACCT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTCCATCATTGAGGTGGTaGAGCACATTGTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIPSLRW*STLSKS
Trigger: TGATTTTGACAATGTGCTCAACCACCTCAATGATGG...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACCAGTGCCTTTACACTTaGTGGTTGAATAGTGTATCA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHQCLYT*WLNSVS
Trigger: TGATACACTATTCAACCACAAAGTGTAAAGGCACTG...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACACAGCTCGCAAACTTTaGTTTTATACACACCGTGTC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYTARKL*FYTHRV
Trigger: GACACGGTGTGTATAAAACAAAAGTTTGCGAGCTGT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAAAACAGCAAAGCAATaGCCTCAACTTCCTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYKTAKQ*PQLPLA
Trigger: TGCCAAAGGAAGTTGAGGCAATTGCTTTGCTGTTTT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCTGTATTTCAAATTCTaGCCCAGTACATCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYLYFKF*PSTSWL
Trigger: CAACCACGATGTACTGGGCAAGAATTTGAAATACAG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATTTGGACCCAAATCTaGAGCCTGAACATCAATCTC +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYIWTQI*SLNINL
Trigger: GAGATTGATGTTCAGGCTCAAGATTTGGGTCCAAAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCAGGGGACATGAGGTaGATGTTAATTTCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPGDMR*MLISGL
Trigger: TAAACCTGAAATTAACATCAACCTCATGTCCCCTGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATAACCACAGGAACGTaGTCATTTTCGTCAATGATG +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIITTGT*SFSSMM
Trigger: CATCATTGACGAAAATGACAACGTTCCTGTGGTTAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACAAGTCATTGCTGTACTaGTCACCGACTCTGCATATT +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYKSLLY*SPTLHI
Trigger: AATATGCAGAGTCGGTGACAAGTACAGCAATGACTT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTAAATTTGTCCATGTCTaGAAGGGCATATCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIKFVHV*KGISVA
Trigger: AGCTACAGATATGCCCTTCAAGACATGGACAAATTT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACCCATCATTGAGGTGGTaGAGCACATTGTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYPSLRW*STLSKS
Trigger: TGATTTTGACAATGTGCTCAACCACCTCAATGATGG...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp CATTCCACACAGAGAGATCACAGCACAATAAATAAAGGATTTCTCATTTGCCACGATAAATGCAACTATTaGGCAATGCCAGTTCTTTCA +
Preference number: 5 (lower is better)
Translates to: HSTQRDHSTINKGFLICHDKCNY*AMPVLS
Trigger: TGAAAGAACTGGCATTGCCAAATAGTTGCATTTATC...GTGGCAAATGAGAAATCCTTTATTTATTGTGCTGTGATCTCTCTGTGTGGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACGGGACGATAATATTCTaGCCTCCTGGAAACATTGTA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYGTIIF*PPGNIV
Trigger: TACAATGTTTCCAGGAGGCAAGAATATTATCGTCCC...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344876.9
CDS CCA 90 bp ATCAGAAGTGCAAAAACAAACCTAAAGTGCATTTTAGCATTCATTTaGTGCATTGGTCAGTTTATGAGATTTCCCTCACAGAGCAAGTTA +
Preference number: 5 (lower is better)
Translates to: IRSAKTNLKCILAFI*CIGQFMRFPSQSKL
Trigger: TAACTTGCTCTGTGAGGGAAATCTCATAAACTGACCAATGCACCAAATGAATGCTAAAATGCACTTTAGGTTTGTTTTTGCACTTCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTTTGTATTATATAAGATaGCTGCTCAAAAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGILYYIR*LLKSRA
Trigger: AGCCCTGCTTTTGAGCAGCAATCTTATATAATACAA...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS-3UTR CAA 90 bp AGCTTGGTCAGAAATGATAATAGTCATAATAAGCATCTCTCTCACCAAGGCATTATAAGAGTTCAACTATaGGGGCTAGTAGAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: SLVRNDNSHNKHLSHQGIIRVQL*GLVESR
Trigger: TCTACTTTCTACTAGCCCCAATAGTTGAACTCTTAT...AATGCCTTGGTGAGAGAGATGCTTATTATGACTATTATCATTTCTGACCAAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 90 bp AGAAGTGCAAAAACAAACCTAAAGTGCATTTTAGCATTCATTTGGTaGATTGGTCAGTTTATGAGATTTCCCTCACAGAGCAAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: RSAKTNLKCILAFIW*IGQFMRFPSQSKLK
Trigger: TTTTAACTTGCTCTGTGAGGGAAATCTCATAAACTGACCAATGCACCAAATGAATGCTAAAATGCACTTTAGGTTTGTTTTTGCACTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS-3UTR CAA 90 bp GGATCACTTAATGGAATTAAGAATTGTATAATGCTTCAGTGGGGTTGTTCATACATAAGAGTTCAACTATaGGGGCTAGTAGAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: GSLNGIKNCIMLQWGCSYIRVQL*GLVESR
Trigger: TCTACTTTCTACTAGCCCCAATAGTTGAACTCTTAT...GTATGAACAACCCCACTGAAGCATTATACAATTCTTAATTCCATTAAGTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 72 bp CCCATGCCGCTACCCCCTGTGGGTAACCCACAGTTTTaGCTGGCAAGGGTCCCTTCCTGCGCTCCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: PMPLPPVGNPQF*LARVPSCAPGS
Trigger: ACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 72 bp TGCCGCTACCCCCTGTGGGTAACCCACAGTTTTGGCTaGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTGGA +
Preference number: 6 (lower is better)
Translates to: CRYPLWVTHSFG*QGSLPALQGVG
Trigger: TCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACCCACAGGGGGTAGCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS GCA 72 bp GGTAACCCACAGTTTTGGCTGGCAAGGGTCCCTTCCTaGGCTCCAGGGAGTTGGACCGATCCACCTCACTGC +
Preference number: 6 (lower is better)
Translates to: GNPQFWLARVPS*APGSWTDPPHC
Trigger: GCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCAAAACTGTGGGTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS TCA 72 bp GTTCCAAGTGGCGGCCCACAGTTGGTGGTGGGATTTTaGAAATGCGTACTGGCTGCCCATGCCGCTACCCCC +
Preference number: 6 (lower is better)
Translates to: VPSGGPQLVVGF*KCVLAAHAATP
Trigger: GGGGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 90 bp ACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTGGTGGTGGGATTTaGAAAATGCGTACTGGCTGCCCATGCCGCTACCCCCTGTGGGTA +
Preference number: 6 (lower is better)
Translates to: TGVSSKWRPTVGGGI*KMRTGCPCRYPLWV
Trigger: TACCCACAGGGGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 72 bp TGGCTGGCAAGGGTCCCTTCCTGCGCTCCAGGGAGTTaGACCGATCCACCTCACTGCATTCAGAATAGGTGT +
Preference number: 6 (lower is better)
Translates to: WLARVPSCAPGS*TDPPHCIQNRC
Trigger: ACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGAAGGGACCCTTGCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 72 bp AGTTCCAAGTGGCGGCCCACAGTTGGTGGTGGGATTTaGAAAATGCGTACTGGCTGCCCATGCCGCTACCCC +
Preference number: 6 (lower is better)
Translates to: SSKWRPTVGGGI*KMRTGCPCRYP
Trigger: GGGGTAGCGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 90 bp CGTCCTCTTTCCAGGCAGGAGAGTGTCACCTCCGCGTTTTCTCCCTaGTGTAGTCGGAATCCATCTATTGCAGGGTGCCGGTGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: RPLSRQESVTSAFSP*CSRNPSIAGCRWSL
Trigger: CAGACTCCACCGGCACCCTGCAATAGATGGATTCCGACTACACAAGGGAGAAAACGCGGAGGTGACACTCTCCTGCCTGGAAAGAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 90 bp CGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTCACCTCCGCG +
Preference number: 6 (lower is better)
Translates to: RLPDTFGMESSPCVC*VVRPLSRQESVTSA
Trigger: CGCGGAGGTGACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS TCA 72 bp TGCAGGGTGCCGGTGGAGTCTGCAGTGTGTCTTTCCTaGGCGATTCTTTCTCCCTTTAGCTGCTCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: CRVPVESAVCLS*AILSPFSCSAA
Trigger: TGCAGCCGAGCAGCTAAAGGGAGAAAGAATCGCTCAGGAAAGACACACTGCAGACTCCACCGGCACCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS GCA 72 bp TCCTGCGCTCCAGGGAGTTGGACCGATCCACCTCACTaGATTCAGAATAGGTGTCCAGGGAAGGCGGTAAGA +
Preference number: 6 (lower is better)
Translates to: SCAPGSWTDPPH*IQNRCPGKAVR
Trigger: TCTTACCGCCTTCCCTGGACACCTATTCTGAATGCAGTGAGGTGGATCGGTCCAACTCCCTGGAGCGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 72 bp TGGAGTGAGTTCCAAGTGGCGGCCCACAGTTGGTGGTaGGATTTTGAAAATGCGTACTGGCTGCCCATGCCG +
Preference number: 6 (lower is better)
Translates to: WSEFQVAAHSWW*DFENAYWLPMP
Trigger: CGGCATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 72 bp GCACACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTaGTGGTGGGATTTTGAAAATGCGTACTGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: AHWSEFQVAAHS*WWDFENAYWLP
Trigger: GGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 72 bp TCCAGGCAGGAGAGTGTCACCTCCGCGTTTTCTCCCTaGTGTAGTCGGAATCCATCTATTGCAGGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: SRQESVTSAFSP*CSRNPSIAGCR
Trigger: CCGGCACCCTGCAATAGATGGATTCCGACTACACAAGGGAGAAAACGCGGAGGTGACACTCTCCTGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS TCA 72 bp AGCCAGACCTCTGAGGTACTCCCATGTCTGAGGCAGTaGGCTGAAGCTCGTAGCTTGACTTCAGCTCCCGAT +
Preference number: 6 (lower is better)
Translates to: SQTSEVLPCLRQ*AEARSLTSAPD
Trigger: ATCGGGAGCTGAAGTCAAGCTACGAGCTTCAGCTCACTGCCTCAGACATGGGAGTACCTCAGAGGTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 72 bp CACTGGAGTGAGTTCCAAGTGGCGGCCCACAGTTGGTaGTGGGATTTTGAAAATGCGTACTGGCTGCCCATG +
Preference number: 6 (lower is better)
Translates to: HWSEFQVAAHSW*WDFENAYWLPM
Trigger: CATGGGCAGCCAGTACGCATTTTCAAAATCCCACCACCAACTGTGGGCCGCCACTTGGAACTCACTCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 90 bp GTGTCACCTCCGCGTTTTCTCCCTTGTGTAGTCGGAATCCATCTATaGCAGGGTGCCGGTGGAGTCTGCAGTGTGTCTTTCCTGAGCGAT +
Preference number: 6 (lower is better)
Translates to: VSPPRFLPCVVGIHL*QGAGGVCSVSFLSD
Trigger: ATCGCTCAGGAAAGACACACTGCAGACTCCACCGGCACCCTGCAATAGATGGATTCCGACTACACAAGGGAGAAAACGCGGAGGTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 90 bp GTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTGCGTTaGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTCACCTC +
Preference number: 6 (lower is better)
Translates to: VTTSRYLRHGVQSLR*FGRSSSFQAGECHL
Trigger: GAGGTGACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 90 bp CACCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: HRVTTSRYLRHGVQS*RLFGRSSSFQAGEC
Trigger: ACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CAA 90 bp GCTCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: ARVTTSRYLRHGVQS*RLFGRSSSFQAGEC
Trigger: ACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS CAA 90 bp GACCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: DRVTTSRYLRHGVQS*RLFGRSSSFQAGEC
Trigger: ACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511115.5
ENST00000611581.1
CDS TCA 72 bp CTGCCGGGATGGCCTTTTTGGGTGGTGCTGGTAAGTTaGTTCGGCCACCCTGCAGTTATAGGATCTAGTGTC +
Preference number: 6 (lower is better)
Translates to: LPGWPFWVVLVS*FGHPAVIGSSV
Trigger: GACACTAGATCCTATAACTGCAGGGTGGCCGAATCAACTTACCAGCACCACCCAAAAAGGCCATCCCGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp TCTCCCTTGTGTAGTCGGAATCCATCTATTGCAGGGTaGCGGTGGAGTCTGCAGTGTGTCTTTCCTGAGCGA +
Preference number: 6 (lower is better)
Translates to: SPLCSRNPSIAG*RWSLQCVFPER
Trigger: TCGCTCAGGAAAGACACACTGCAGACTCCACCGGCACCCTGCAATAGATGGATTCCGACTACACAAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS GCA 72 bp CGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTTaGGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RLPDTFGMESSP*VCLVVRPLSRQ
Trigger: CTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CCA 72 bp GAGAGACCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTC +
Preference number: 6 (lower is better)
Translates to: ERPCHDFQIPSA*SPVLAFVWSFV
Trigger: GACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511115.5
ENST00000611581.1
CDS CAA 72 bp CCGCGTTTTCTCCCTTGTGTAGTCGGAATCCATCTATaGCAGGGTGCCGGTGGAGTCTGCAGTGTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: PRFLPCVVGIHL*QGAGGVCSVSF
Trigger: GAAAGACACACTGCAGACTCCACCGGCACCCTGCAATAGATGGATTCCGACTACACAAGGGAGAAAACGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 72 bp GATACCTTCGGCATGGAGTCCAGTCCTTGCGTTTGTTaGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTC +
Preference number: 6 (lower is better)
Translates to: DTFGMESSPCVC*VVRPLSRQESV
Trigger: GACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 72 bp TCCAGATACCTTCGGCATGGAGTCCAGTCCTTGCGTTaGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SRYLRHGVQSLR*FGRSSSFQAGE
Trigger: CTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS TCA 72 bp CCATTTATGGTAGGCACCAATGTGATGTCCCCTTTGTaGATCTGCCGGGATGGCCTTTTTGGGTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PFMVGTNVMSPL*ICRDGLFGWCW
Trigger: CCAGCACCACCCAAAAAGGCCATCCCGGCAGATTCACAAAGGGGACATCACATTGGTGCCTACCATAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS TCA 72 bp GCTGAGAGACCTGCTCAACAGCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCTCTGGCACGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: AERPAQQQEWRG*VLMRNSLARGL
Trigger: CAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGCCACTCCTGCTGTTGAGCAGGTCTCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000510305.5
CDS CCA 72 bp ATACCTTCGGCATGGAGTCCAGTCCTTGCGTTTGTTTaGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGTCA +
Preference number: 6 (lower is better)
Translates to: IPSAWSPVLAFV*SFVLFPGRRVS
Trigger: TGACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CCA 72 bp TACACACCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTC +
Preference number: 6 (lower is better)
Translates to: YTPCHDFQIPSA*SPVLAFVWSFV
Trigger: GACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CCA 72 bp AGATGCTCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTC +
Preference number: 6 (lower is better)
Translates to: RCSCHDFQIPSA*SPVLAFVWSFV
Trigger: GACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507846.5
CDS CCA 72 bp CCTCTTTCGTGTCACGACTTCCAGATACCTTCGGCATaGAGTCCAGTCCTTGCGTTTGTTTGGTCGTTCGTC +
Preference number: 6 (lower is better)
Translates to: PLSCHDFQIPSA*SPVLAFVWSFV
Trigger: GACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAAAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510305.5
CDS CAA 72 bp ACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: TTSRYLRHGVQS*RLFGRSSSFQA
Trigger: TGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 90 bp TTTCGTGTCACGACTTCCAGATACCTTCGGCATGGAGTCCAGTCCTaGCGTTTGTTTGGTCGTTCGTCCTCTTTCCAGGCAGGAGAGTGT +
Preference number: 6 (lower is better)
Translates to: FRVTTSRYLRHGVQS*RLFGRSSSFQAGEC
Trigger: ACACTCTCCTGCCTGGAAAGAGGACGAACGACCAAACAAACGCAAGGACTGGACTCCATGCCGAAGGTATCTGGAAGTCGTGACACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510305.5
CDS TCA 72 bp GAAGCTGAGAGACCTCAACAGCAGGAGTGGCGTGGGTaGGTTCTAATGAGAAATTCTCTGGCACGTGGTTTG +
Preference number: 6 (lower is better)
Translates to: EAERPQQQEWRG*VLMRNSLARGL
Trigger: CAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGCCACTCCTGCTGTTGAGGTCTCTCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS TCA 72 bp ACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATTaGAAGAAGCTGAGAGACCTCAACAGCAGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: TWSWLILPLVKH*KKLRDLNSRSG
Trigger: GCCACTCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp TGGAGAATCTCGCCCCAAATCATAATCACTGTCTCCTaGCTCACTGTCACCACGGCCACTGTCTTTCAAGCT +
Preference number: 6 (lower is better)
Translates to: WRISPQIIITVS*LTVTTATVFQA
Trigger: AGCTTGAAAGACAGTGGCCGTGGTGACAGTGAGGCAGGAGACAGTGATTATGATTTGGGGCGAGATTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
ENST00000620262.1
CDS TCA 72 bp ACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATTaGAAGAAGCTGAGAGACCGTGTCACGACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: TWSWLILPLVKH*KKLRDRVTTSR
Trigger: TCTGGAAGTCGTGACACGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511115.5
ENST00000611581.1
CDS CCA 72 bp TTGTGTAGTCGGAATCCATCTATTGCAGGGTGCCGGTaGAGTCTGCAGTGTGTCTTTCCTGAGCGATTCTTT +
Preference number: 6 (lower is better)
Translates to: LCSRNPSIAGCR*SLQCVFPERFF
Trigger: AAAGAATCGCTCAGGAAAGACACACTGCAGACTCCACCGGCACCCTGCAATAGATGGATTCCGACTACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
CDS CAA 72 bp AATTTTCAGGGATCTCCTCCATGGCTGGCAGCCATTTaGAAGAAGGCTGCACACTGGAGTGAGTTCCAAGTG +
Preference number: 6 (lower is better)
Translates to: NFQGSPPWLAAI*KKAAHWSEFQV
Trigger: CACTTGGAACTCACTCCAGTGTGCAGCCTTCTTCAAAATGGCTGCCAGCCATGGAGGAGATCCCTGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 72 bp AACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCTCAACAGCAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: NLVLADIAPGEA*KEAERPQQQEW
Trigger: CCACTCCTGCTGTTGAGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp AACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCGTGTCACGACTTCCAG +
Preference number: 6 (lower is better)
Translates to: NLVLADIAPGEA*KEAERPCHDFQ
Trigger: CTGGAAGTCGTGACACGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511115.5
ENST00000611581.1
CDS GCA 72 bp GCTCTGGCGGACATCTTGAAGCAGTTTGTTAATCTCTaGCACCAGTTCACTGGCATCCATGAGTTCGTGTTT +
Preference number: 6 (lower is better)
Translates to: ALADILKQFVNL*HQFTGIHEFVF
Trigger: AAACACGAACTCATGGATGCCAGTGAACTGGTGGCAGAGATTAACAAACTGCTTCAAGATGTCCGCCAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CCA 72 bp CAGGTCGCTGAATCCTTCACCCAACAGCCTATCTATTaGAGAATCTCGCCCCAAATCATAATCACTGTCTCC +
Preference number: 6 (lower is better)
Translates to: QVAESFTQQPIY*RISPQIIITVS
Trigger: GGAGACAGTGATTATGATTTGGGGCGAGATTCTCCAATAGATAGGCTGTTGGGTGAAGGATTCAGCGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
ENST00000620262.1
CDS CAA 90 bp GGAACGTTGTCATTTTCGTCAATGATGGTGAGCACAACTGTGGTATaGCTTACCAGTTGCTTCGGGCTTCCTCCATCTCTTGCTTCTACC +
Preference number: 6 (lower is better)
Translates to: GTLSFSSMMVSTTVV*LTSCFGLPPSLAST
Trigger: GGTAGAAGCAAGAGATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCTCACCATCATTGACGAAAATGACAACGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp ATCAAATGCACTGTCCAGGGGAATGCGAGTCCCAACTaGTGCACTCTCAGATATCTCAATAGGTATGAGAGA +
Preference number: 6 (lower is better)
Translates to: IKCTVQGNASPN*CTLRYLNRYER
Trigger: TCTCTCATACCTATTGAGATATCTGAGAGTGCAGCAGTTGGGACTCGCATTCCCCTGGACAGTGCATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp CGATCTAACTCTCTGACCACTATGAGTTCTGCATACTaGGCTCCATCAGTCCTGGTCCGAACCTCGATATTA +
Preference number: 6 (lower is better)
Translates to: RSNSLTTMSSAY*APSVLVRTSIL
Trigger: TAATATCGAGGTTCGGACCAGGACTGATGGAGCCAAGTATGCAGAACTCATAGTGGTCAGAGAGTTAGATCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 90 bp TGGAGACATCCAAGGATGCCTGGCTTACTGAAGTCATTGCTGTACTaGTCACCGACTCTGCATATTCAAAGATCATGCACTTCAGAAGGA +
Preference number: 6 (lower is better)
Translates to: WRHPRMPGLLKSLLY*SPTLHIQRSCTSEG
Trigger: TCCTTCTGAAGTGCATGATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS TCA 72 bp AGATATTCTCCTCATTACCTGCTACTATGGCGCAGCTaGGTTCAGCATTCACACCAGAGTCTCTGTCAATTG +
Preference number: 6 (lower is better)
Translates to: RYSPHYLLLWRS*VQHSHQSLCQL
Trigger: CAATTGACAGAGACTCTGGTGTGAATGCTGAACTCAGCTGCGCCATAGTAGCAGGTAATGAGGAGAATATCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp GCTGAGTTCAGCATTCACACCAGAGTCTCTGTCAATTaGCCTTATTCTTGTGACATGAAAGCCACTTTCAGC +
Preference number: 6 (lower is better)
Translates to: AEFSIHTRVSVN*PYSCDMKATFS
Trigger: GCTGAAAGTGGCTTTCATGTCACAAGAATAAGGGCAATTGACAGAGACTCTGGTGTGAATGCTGAACTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 72 bp GCGTGGGTGAGTTCTAATGAGAAATTCTCTGGCACGTaGTTTGATGAGATTGTCACCAAACTGTTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: AWVSSNEKFSGT*FDEIVTKLLSD
Trigger: GTCACTCAACAGTTTGGTGACAATCTCATCAAACCACGTGCCAGAGAATTTCTCATTAGAACTCACCCACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
CDS CAA 72 bp TCATTTTCGTCAATGATGGTGAGCACAACTGTGGTATaGCTTACCAGTTGCTTCGGGCTTCCTCCATCTCTT +
Preference number: 6 (lower is better)
Translates to: SFSSMMVSTTVV*LTSCFGLPPSL
Trigger: AAGAGATGGAGGAAGCCCGAAGCAACTGGTAAGCAATACCACAGTTGTGCTCACCATCATTGACGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp CCAAGGATGCCTGGCTTACTGAAGTCATTGCTGTACTaGTCACCGACTCTGCATATTCAAAGATCATGCACT +
Preference number: 6 (lower is better)
Translates to: PRMPGLLKSLLY*SPTLHIQRSCT
Trigger: AGTGCATGATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp TGGAGACATCCAAGGATGCCTGGCTTACTGAAGTCATaGCTGTACTTGTCACCGACTCTGCATATTCAAAGA +
Preference number: 6 (lower is better)
Translates to: WRHPRMPGLLKS*LYLSPTLHIQR
Trigger: TCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp AACTTGGTCTTGGCTGATATTGCCCCTGGTGAAGCATaGAAAGAAGCTGAGAGACCTGCTGGAAACCAAATA +
Preference number: 6 (lower is better)
Translates to: NLVLADIAPGEA*KEAERPAGNQI
Trigger: TATTTGGTTTCCAGCAGGTCTCTCAGCTTCTTTCAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617302.1
CDS CAA 90 bp TCTGCCGTATTATTACGCAATGCAGGCCCTATAACCACAGGAACGTaGTCATTTTCGTCAATGATGGTGAGCACAACTGTGGTATTGCTT +
Preference number: 6 (lower is better)
Translates to: SAVLLRNAGPITTGT*SFSSMMVSTTVVLL
Trigger: AAGCAATACCACAGTTGTGCTCACCATCATTGACGAAAATGACAACGTTCCTGTGGTTATAGGGCCTGCATTGCGTAATAATACGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS TCA 72 bp TATTATCATGGAGACATCCAAGGATGCCTGGCTTACTaGAGTCATTGCTGTACTTGTCACCGACTCTGCATA +
Preference number: 6 (lower is better)
Translates to: YYHGDIQGCLAY*SHCCTCHRLCI
Trigger: TATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCATGATAATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp TCCTCGTTTACTACAAGTAGAGGAGAATTTCCCCTCTaGATGGCTCGAAATCGAACAGTAGAAGGATTAGGA +
Preference number: 6 (lower is better)
Translates to: SSFTTSRGEFPL*MARNRTVEGLG
Trigger: TCCTAATCCTTCTACTGTTCGATTTCGAGCCATGCAGAGGGGAAATTCTCCTCTACTTGTAGTAAACGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CAA 72 bp TTATTACGCAATGCAGGCCCTATAACCACAGGAACGTaGTCATTTTCGTCAATGATGGTGAGCACAACTGTG +
Preference number: 6 (lower is better)
Translates to: LLRNAGPITTGT*SFSSMMVSTTV
Trigger: CACAGTTGTGCTCACCATCATTGACGAAAATGACAACGTTCCTGTGGTTATAGGGCCTGCATTGCGTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp ATCTGTAGCTCCTGGAATATTTGTTTCCTCGAAAACTaGGTCTTGGCTGATATTGCCCCTGGTGAAGCATTG +
Preference number: 6 (lower is better)
Translates to: ICSSWNICFLEN*VLADIAPGEAL
Trigger: CAATGCTTCACCAGGGGCAATATCAGCCAAGACCAAGTTTTCGAGGAAACAAATATTCCAGGAGCTACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
ENST00000611581.1
ENST00000617302.1
ENST00000620262.1
CDS CAA 72 bp AGTTCACTGGCATCCATGAGTTCGTGTTTCCCATCATaGAGGTGGTTGAGCACATTGTCAAAATCATCTTCC +
Preference number: 6 (lower is better)
Translates to: SSLASMSSCFPS*RWLSTLSKSSS
Trigger: GGAAGATGATTTTGACAATGTGCTCAACCACCTCAATGATGGGAAACACGAACTCATGGATGCCAGTGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
ENST00000510305.5
ENST00000511115.5
CDS CAA 90 bp GCGTCTCTTAATAACACAGCACAGCAATTAACAGCTCGCAAACTTTaGTTTTATACACACCGTGTCACGACTTCCAGATACCTTCGGCAT +
Preference number: 6 (lower is better)
Translates to: ASLNNTAQQLTARKL*FYTHRVTTSRYLRH
Trigger: ATGCCGAAGGTATCTGGAAGTCGTGACACGGTGTGTATAAAACAAAAGTTTGCGAGCTGTTAATTGCTGTGCTGTGTTATTAAGAGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS TCA 72 bp CGTTGGTATGGATGTCACATGATCGTGGATCAATTATaGAGATATTCTCCTCATTACCTGCTACTATGGCGC +
Preference number: 6 (lower is better)
Translates to: RWYGCHMIVDQL*RYSPHYLLLWR
Trigger: GCGCCATAGTAGCAGGTAATGAGGAGAATATCTTCATAATTGATCCACGATCATGTGACATCCATACCAACG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp CATCTGGATCCGTGGCATTCAGATCTAAGAGCAAAGTaGCAACCGGGGAGTTTTCTAAGAGTTGTATTATAT +
Preference number: 6 (lower is better)
Translates to: HLDPWHSDLRAK*QPGSFLRVVLY
Trigger: ATATAATACAACTCTTAGAAAACTCCCCGGTTGGCACTTTGCTCTTAGATCTGAATGCCACGGATCCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS GCA 72 bp TTTGGGAATGGTGATTTCTGCCGTATTATTACGCAATaGAGGCCCTATAACCACAGGAACGTTGTCATTTTC +
Preference number: 6 (lower is better)
Translates to: FGNGDFCRIITQ*RPYNHRNVVIF
Trigger: GAAAATGACAACGTTCCTGTGGTTATAGGGCCTGCATTGCGTAATAATACGGCAGAAATCACCATTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 90 bp TTATTATCATGGAGACATCCAAGGATGCCTGGCTTACTGAAGTCATaGCTGTACTTGTCACCGACTCTGCATATTCAAAGATCATGCACT +
Preference number: 6 (lower is better)
Translates to: LLSWRHPRMPGLLKS*LYLSPTLHIQRSCT
Trigger: AGTGCATGATCTTTGAATATGCAGAGTCGGTGACAAGTACAGCAATGACTTCAGTAAGCCAGGCATCCTTGGATGTCTCCATGATAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 72 bp ATCACATCAAACTCTATGGAACAGTTCAAGTTTTTCTaGCACAGTTGTTCACGGTCAATTGTAGCCCCTATG +
Preference number: 6 (lower is better)
Translates to: ITSNSMEQFKFF*HSCSRSIVAPM
Trigger: CATAGGGGCTACAATTGACCGTGAACAACTGTGCCAGAAAAACTTGAACTGTTCCATAGAGTTTGATGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CAA 72 bp AAACTCTATGGAACAGTTCAAGTTTTTCTGGCACAGTaGTTCACGGTCAATTGTAGCCCCTATGCTGATTTC +
Preference number: 6 (lower is better)
Translates to: KLYGTVQVFLAQ*FTVNCSPYADF
Trigger: GAAATCAGCATAGGGGCTACAATTGACCGTGAACAACTGTGCCAGAAAAACTTGAACTGTTCCATAGAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CCA 72 bp ATCAAAGATTCTGAGGGCATAGATGGCTCCATTAGATaGGTCAATGGTTACATATGTAGTTATGGAACTTCC +
Preference number: 6 (lower is better)
Translates to: IKDSEGIDGSIR*VNGYICSYGTS
Trigger: GGAAGTTCCATAACTACATATGTAACCATTGACCCATCTAATGGAGCCATCTATGCCCTCAGAATCTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 72 bp AATAACACAGCACAGCAATTAACAGCTCGCAAACTTTaGTTTTATACACACCGTGTCACGACTTCCAGATAC +
Preference number: 6 (lower is better)
Translates to: NNTAQQLTARKL*FYTHRVTTSRY
Trigger: GTATCTGGAAGTCGTGACACGGTGTGTATAAAACAAAAGTTTGCGAGCTGTTAATTGCTGTGCTGTGTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CAA 72 bp GCTTCAATAAAACATCAGCCACATCCTCTGATAGTCTaGCAATTACTGATCCAACCCTCTGTTCCTCATAAA +
Preference number: 6 (lower is better)
Translates to: ASIKHQPHPLIV*QLLIQPSVPHK
Trigger: TTTATGAGGAACAGAGGGTTGGATCAGTAATTGCAAGACTATCAGAGGATGTGGCTGATGTTTTATTGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6
CDS CAA 72 bp CTGGAAGTGGGGTGGATTGTCATTGATATCATTGATTaGAACTGTAAAATGTTTCACTGTAGAGAGACTGGG +
Preference number: 6 (lower is better)
Translates to: LEVGWIVIDIID*NCKMFHCRETG
Trigger: CCCAGTCTCTCTACAGTGAAACATTTTACAGTTCAAATCAATGATATCAATGACAATCCACCCCACTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CCA 72 bp TATAAGATTGCTGCTCAAAAGCAGGGCTGTTGTCATTaGAGTCTGAAATGCTTATTTTTAGTATGGATGAGC +
Preference number: 6 (lower is better)
Translates to: YKIAAQKQGCCH*SLKCLFLVWMS
Trigger: GCTCATCCATACTAAAAATAAGCATTTCAGACTCCAATGACAACAGCCCTGCTTTTGAGCAGCAATCTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344876.9
ENST00000412923.6
ENST00000507846.5
CDS CAA 90 bp TATCAGAAGTGCAAAAACAAACCTAAAGTGCATTTTAGCATTCATTaGGTGCATTGGTCAGTTTATGAGATTTCCCTCACAGAGCAAGTT +
Preference number: 6 (lower is better)
Translates to: YQKCKNKPKVHFSIH*VHWSVYEISLTEQV
Trigger: AACTTGCTCTGTGAGGGAAATCTCATAAACTGACCAATGCACCAAATGAATGCTAAAATGCACTTTAGGTTTGTTTTTGCACTTCTGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344876.9
ENST00000412923.6