RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH17 (Homo sapiens)

Ensembl gene IDs: ENSG00000118946

Ensembl transcript IDs: ENST00000377918.8, ENST00000484979.5, ENST00000612954.4, ENST00000615375.1

Found 681 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTTaGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGAGGGC +
Preference number: 1 (lower is better)
Translates to: HPGSLLLRCKARCTP*LGCLMLRGPLGGEG
Trigger: GCCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp GCATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTaGTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: ASTDSLPRSLLGWSS*SRTAPISLESRLAL
Trigger: CAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATaGACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGA +
Preference number: 1 (lower is better)
Translates to: LHSHPGSLLLRCKAR*TPWLGCLMLRGPLG
Trigger: TCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp AGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATCTaGAAAGACCCTTGCCATCTGATCGGAAGCCATGAAGGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: STHLTGIPAGSGMHI*KDPCHLIGSHEGRV
Trigger: GACCCTCCCTTCATGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 90 bp GCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTaGAATGCACATCTGCAAAGACCCTTGCCATCTGATCGGAAGCCA +
Preference number: 1 (lower is better)
Translates to: AAQEQHPSHWNPGWL*NAHLQRPLPSDRKP
Trigger: TGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp ACTGGAATCCCGGCTGGCTCTGGAATGCACATCTGCAAAGACCCTTaGCATCTGATCGGAAGCCATGAAGGGAGGGTCTCTTGGTTGCTT +
Preference number: 1 (lower is better)
Translates to: TGIPAGSGMHICKDP*HLIGSHEGRVSWLL
Trigger: AAGCAACCAAGAGACCCTCCCTTCATGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp CCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTCCTCTaGATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAG +
Preference number: 1 (lower is better)
Translates to: PAVLQKLINFSHNFL*IHRLSAQIPVGVVK
Trigger: CTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATGCAGAGGAAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR TCA 90 bp CTGATCGGAAGCCATGAAGGGAGGGTCTCTTGGTTGCTTACTAGGTaGCAGATATTGACTGTCAGTGGGCAAGTACTGACTGCTTGCTTC +
Preference number: 1 (lower is better)
Translates to: LIGSHEGRVSWLLTR*QILTVSGQVLTACF
Trigger: GAAGCAAGCAGTCAGTACTTGCCCACTGACAGTCAATATCTGTCACCTAGTAAGCAACCAAGAGACCCTCCCTTCATGGCTTCCGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTaGATTTTCAGCCTGATTGGCTGCAGGGAACTGTGGCATCCAGCA +
Preference number: 1 (lower is better)
Translates to: NISFNCRYKEICAVI*IFSLIGCRELWHPA
Trigger: TGCTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 90 bp ACTTGTGGGCACTTCAGATGTTCACTAAAAGCCTTAAAGCAGCATTaGTCTTTCTTCATCCCTGTAAAATGGGTTATCACCAGGAGGGAT +
Preference number: 1 (lower is better)
Translates to: TCGHFRCSLKALKQH*SFFIPVKWVITRRD
Trigger: ATCCCTCCTGGTGATAACCCATTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCTGAAGTGCCCACAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
3UTR CCA 90 bp TTGTTGTCCTTGTTCACCAATCACTTGGTGCAGCTAAGAACTTTATaGAGTGATGGGCTGATAATGGAAATAGCCAACCTGCAAAACACT +
Preference number: 1 (lower is better)
Translates to: LLSLFTNHLVQLRTL*SDGLIMEIANLQNT
Trigger: AGTGTTTTGCAGGTTGGCTATTTCCATTATCAGCCCATCACTCCATAAAGTTCTTAGCTGCACCAAGTGATTGGTGAACAAGGACAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR GCA 90 bp TGTTTACCACAAATATGTGTTAATGTTTGGTGTAGCTTGGACTACTaGAAGGTCTTTTCAGGACTTTCAGTAGAAGCCTGTGATGACTGC +
Preference number: 1 (lower is better)
Translates to: CLPQICVNVWCSLDY*KVFSGLSVEACDDC
Trigger: GCAGTCATCACAGGCTTCTACTGAAAGTCCTGAAAAGACCTTGCAGTAGTCCAAGCTACACCAAACATTAACACATATTTGTGGTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR TCA 90 bp ATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACAGACATGTCACA +
Preference number: 1 (lower is better)
Translates to: INTLFWFLFKWLAFS*SSFHLECLPNRHVT
Trigger: TGTGACATGTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGAACCAGAAGAGTGTGTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR TCA 90 bp TCTGTCCTAATACAAGTTTGGTCAAAACGAAACCATTGTTATCTCTaGAAAAGAAATCAGCAGTGGAAAGAACATACTTGTGGGCACTTC +
Preference number: 1 (lower is better)
Translates to: SVLIQVWSKRNHCYL*KRNQQWKEHTCGHF
Trigger: GAAGTGCCCACAAGTATGTTCTTTCCACTGCTGATTTCTTTTTCAGAGATAACAATGGTTTCGTTTTGACCAAACTTGTATTAGGACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
3UTR CAA 90 bp CCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTaGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PSREPFVEVQGSMHA*VGLLDAEGTSWRRG
Trigger: CCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATTCAGTGGGCAAGTACTaGCTGCTTGCTTCAGCCAGG +
Preference number: 2 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHSVGKY*LLASAR
Trigger: CCTGGCTGAAGCAAGCAGTCAGTACTTGCCCACTGA...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCCATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCA +
Preference number: 2 (lower is better)
Translates to: SCSRTAPISLESRLALECHFQPD*LQGTVA
Trigger: TGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATG...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATTCTGCATTTTCAGCCTaGTTGGCTGCAGGGAACTGT +
Preference number: 2 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHSAFSA*LAAGNC
Trigger: ACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGA...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACCTAGGTGACAGATATTaGCTGTCAGTGGGCAAGTAC +
Preference number: 2 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNLGDRY*LSVGKY
Trigger: GTACTTGCCCACTGACAGTCAATATCTGTCACCTAG...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR GCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGAAGTTTTCATCTTGAGTaGCTCCCTAACAGACATGTC +
Preference number: 2 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRSFHLE*LPNRHV
Trigger: GACATGTCTGTTAGGGAGGCACTCAAGATGAAAACT...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAAATCCCGGCTGGCTCTaGAATGCACATCTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSNPGWL*NAHLQR
Trigger: TCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATT...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGAAAGAACATACTTGTaGGCACTTCAGATGTTCACT +
Preference number: 2 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHERTYL*ALQMFT
Trigger: AGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCATTAACACACTCTTCTaGTTCTTGTTCAAGTGGTTG +
Preference number: 2 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSINTLF*FLFKWL
Trigger: CAACCACTTGAACAAGAACCAGAAGAGTGTGTTAAT...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTTTGCTCTGAGGCACTaGTTCCCACACTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHFALRH*FPHSMG
Trigger: CCCCATGGAGTGTGGGAAGCAGTGCCTCAGAGCAAA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR TCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTTGGTTGCTTACTAGGTaGCAGATATTGACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLWLLTR*QILTVS
Trigger: ACTGACAGTCAATATCTGTCACCTAGTAAGCAACCA...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCTGATCGGAAGCCATaGAGGGAGGGTCTCTTGGTT +
Preference number: 2 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSDRKP*REGLLV
Trigger: AACCAAGAGACCCTCCCTTCATGGCTTCCGATCAGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCTTCCCACACTCCATaGGGAAAAGGAAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHASHTP*GKGSRK
Trigger: TTTCCTGCTTCCTTTTCCCCATGGAGTGTGGGAAGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTTCAGCCAGGGCTCCTaGTTTTGCTTCACAGCCATC +
Preference number: 2 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKFSQGS*FCFTAI
Trigger: GATGGCTGTGAAGCAAAACCAGGAGCCCTGGCTGAA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CAA 90 bp GGTTCTTGTTCAAGTGGTTGGCTTTTAGTTGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: GSCSSGWLLVEVVFI*SASLTDMSQQEPLL
Trigger: TAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCAAGAGACTTTGCTCTaGGGCACTGCTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIQETLL*GTASHT
Trigger: AGTGTGGGAAGCAGTGCCTCAGAGCAAAGTCTCTTG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTGCCTTAAAGCAGCATTaGTCTTTCTTCATCCCTGTA +
Preference number: 2 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGALKQH*SFFIPV
Trigger: TACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGC...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCCTTAAAGCAGCATTaGTCTTTCTTCATCCCTGTA +
Preference number: 2 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHALKQH*SFFIPV
Trigger: TACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR CAA 90 bp ATACAATGTATGCTGCTTTTGTTGTTGTCCTTGTTCACCAATCACTaGGTGCAGCTAAGAACTTTATGGAGTGATGGGCTGATAATGGAA +
Preference number: 2 (lower is better)
Translates to: IQCMLLLLLSLFTNH*VQLRTLWSDGLIME
Trigger: TTCCATTATCAGCCCATCACTCCATAAAGTTCTTAGCTGCACCAAGTGATTGGTGAACAAGGACAACAACAAAAGCAGCATACATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGTCTACGTGTGTaGAGGACAAAATGGACTGTA +
Preference number: 2 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHISLRV*RTKWTV
Trigger: TACAGTCCATTTTGTCCTGCACACACGTAGACTAAT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTAAACAAGAGACTTTaGTCTGAGGCACTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFLNKRL*SEALLP
Trigger: GGGAAGCAGTGCCTCAGAGCAAAGTCTCTTGTTTAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCTTCTTTAATGACGTaGATTAGTCTACGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSSLMT*ISLRVC
Trigger: GCACACACGTAGACTAATTCACGTCATTAAAGAAGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTGTAGCTTGGACTACTaGAAGGTCTTTTCAGGACTT +
Preference number: 2 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFCSLDY*KVFSGL
Trigger: AAGTCCTGAAAAGACCTTGCAGTAGTCCAAGCTACA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTCATCCCTGTAAAATaGGTTATCACCAGGAGGGAT +
Preference number: 2 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFFIPVK*VITRRD
Trigger: ATCCCTCCTGGTGATAACCCATTTTACAGGGATGAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGAAAGAACATACTTGTaGGCACTTCAGATGTTCACT +
Preference number: 2 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIERTYL*ALQMFT
Trigger: AGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAATGTTTGGTGTAGCTTaGACTACTGCAAGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKMFGVA*TTARSF
Trigger: AAAAGACCTTGCAGTAGTCCAAGCTACACCAAACAT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAAGTCTTTTTCCCAGTaGGATTCACAGTTTCGTAAG +
Preference number: 2 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKKSFSQ*DSQFRK
Trigger: CTTACGAAACTGTGAATCCCACTGGGAAAAAGACTT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCCAATTCCTGAAATTTaGGGTTTCTTAGCCTCATAT +
Preference number: 2 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFPIPEI*GFLASY
Trigger: ATATGAGGCTAAGAAACCTCAAATTTCAGGAATTGG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGAATGGTCATGTGACTTaGGTATGTCTAAGACATTTT +
Preference number: 2 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKNGHVT*VCLRHF
Trigger: AAAATGTCTTAGACATACGCAAGTCACATGACCATT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAATATGTGTTAATGTTTaGTGTAGCTTGGACTACTGC +
Preference number: 2 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKICVNV*CSLDYC
Trigger: GCAGTAGTCCAAGCTACACCAAACATTAACACATAT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR GCA 72 bp TTGAGGTGCAAGGCTCGATGCACGCCTTGGTTGGGCTaGTTGATGCTGAGGGGACCTCTTGGAGGAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LRCKARCTPWLG*LMLRGPLGGEG
Trigger: GCCCTCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp CATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATaGACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGA +
Preference number: 3 (lower is better)
Translates to: HPGSLLLRCKAR*TPWLGCLMLRG
Trigger: TCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp GACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTaGTCAAGAACAGCACCCATCTCACTGGAATCCCGG +
Preference number: 3 (lower is better)
Translates to: DSLPRSLLGWSS*SRTAPISLESR
Trigger: CCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCCAGGGAGCCTTTTGTaGAGGTGCAAGGCTCGATGC +
Preference number: 3 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMPGSLL*RCKARC
Trigger: GCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGG...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp TTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTaGAAGGCTCGATGCACGCCTTGGTTGGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: LLHSHPGSLLLR*KARCTPWLGCL
Trigger: CAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp AGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTTaGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGA +
Preference number: 3 (lower is better)
Translates to: SLLLRCKARCTP*LGCLMLRGPLG
Trigger: TCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp GCATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTaGTCAAGCTGCTCAAGAACAGCACCCATCTCACTG +
Preference number: 3 (lower is better)
Translates to: ASTDSLPRSLLG*SSCSRTAPISL
Trigger: CAGTGAGATGGGTGCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR TCA 72 bp TGGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTaGGGTGCAAGGCTCGATGCACGCCTTGGTTGGGCT +
Preference number: 3 (lower is better)
Translates to: WFCFTAIQGAFC*GARLDARLGWA
Trigger: AGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp GGTGGTCAAGCTGCTCAAGAACAGCACCCATCTCACTaGAATCCCGGCTGGCTCTGGAATGCACATCTGCAA +
Preference number: 3 (lower is better)
Translates to: GGQAAQEQHPSH*NPGWLWNAHLQ
Trigger: TTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTTGACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp CTCACTGGAATCCCGGCTGGCTCTGGAATGCACATCTaGAAAGACCCTTGCCATCTGATCGGAAGCCATGAA +
Preference number: 3 (lower is better)
Translates to: LTGIPAGSGMHI*KDPCHLIGSHE
Trigger: TTCATGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp GAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTaGAATGCACATCTGCAAAGACCCTTGCCATCTGAT +
Preference number: 3 (lower is better)
Translates to: EQHPSHWNPGWL*NAHLQRPLPSD
Trigger: ATCAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp CAGATATTGACTGTCAGTGGGCAAGTACTGACTGCTTaGTTCAGCCAGGGCTCCTGGTTTTGCTTCACAGCC +
Preference number: 3 (lower is better)
Translates to: QILTVSGQVLTA*FSQGSWFCFTA
Trigger: GGCTGTGAAGCAAAACCAGGAGCCCTGGCTGAAGCAAGCAGTCAGTACTTGCCCACTGACAGTCAATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCCTTAAAGCAGCATaGGTCTTTCTTCATCCCTGT +
Preference number: 3 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNSLKAA*VFLHPC
Trigger: ACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCT...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGAC +
Preference number: 3 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNEVVFI*SASLTD
Trigger: GTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTC...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp AGAGATTTGTGCGGTAATCTGCATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCATCCAGCACCTGTCAG +
Preference number: 3 (lower is better)
Translates to: RDLCGNLHFQPD*LQGTVASSTCQ
Trigger: CTGACAGGTGCTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR GCA 72 bp ATTTGTGCGGTAATCTGCATTTTCAGCCTGATTGGCTaGAGGGAACTGTGGCATCCAGCACCTGTCAGAATG +
Preference number: 3 (lower is better)
Translates to: ICAVICIFSLIG*RELWHPAPVRM
Trigger: CATTCTGACAGGTGCTGGATGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGATTACCGCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACATAGTGTGCTCTCGCTaGTCTTTTCCAAATGTACAA +
Preference number: 3 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNIVCSR*SFPNVQ
Trigger: TTGTACATTTGGAAAAGACAAGCGAGAGCACACTAT...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR TCA 72 bp AGCCATGAAGGGAGGGTCTCTTGGTTGCTTACTAGGTaGCAGATATTGACTGTCAGTGGGCAAGTACTGACT +
Preference number: 3 (lower is better)
Translates to: SHEGRVSWLLTR*QILTVSGQVLT
Trigger: AGTCAGTACTTGCCCACTGACAGTCAATATCTGTCACCTAGTAAGCAACCAAGAGACCCTCCCTTCATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACTGCCCAGATCCCTGTaGGGGTGGTCAAGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKLPRSL*GWSSCS
Trigger: TGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp TGGGCTGATAATGGAAATAGCCAACCTGCAAAACACTaGGGCCAGGAAAGTCAGACTTTAATCAGGTCTCAT +
Preference number: 3 (lower is better)
Translates to: WADNGNSQPAKH*GQESQTLIRSH
Trigger: ATGAGACCTGATTAAAGTCTGACTTTCCTGGCCCCAGTGTTTTGCAGGTTGGCTATTTCCATTATCAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGTGGAAAGAACATACTaGTGGGCACTTCAGATGTTC +
Preference number: 3 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHVERTY*WALQMF
Trigger: GAACATCTGAAGTGCCCACAAGTATGTTCTTTCCAC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR TCA 72 bp CTCTTCTGGTTCTTGTTCAAGTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACAGA +
Preference number: 3 (lower is better)
Translates to: LFWFLFKWLAFS*SSFHLECLPNR
Trigger: TCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGAACCAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGCCTTAAAGCAGCATaGGTCTTTCTTCATCCCTGT +
Preference number: 3 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSLKAA*VFLHPC
Trigger: ACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
3UTR-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAATGTTTGGTGTAGCTaGGACTACTGCAAGGTCTTT +
Preference number: 3 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKNVWCS*DYCKVF
Trigger: AAAGACCTTGCAGTAGTCCAAGCTACACCAAACATT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGTTTCCCCGGCAGTCTaGCAAAAGCTTATCAATTTC +
Preference number: 3 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKVSPAV*QKLINF
Trigger: GAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAAC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp GGTGACAGAGAGCCTAAAGGTAAATCCCTCACACATTaGCACAACCAATTATTACAACCTTATGGTGTTTTA +
Preference number: 3 (lower is better)
Translates to: GDREPKGKSLTH*HNQLLQPYGVL
Trigger: TAAAACACCATAAGGTTGTAATAATTGGTTGTGCCAATGTGTGAGGGATTTACCTTTAGGCTCTCTGTCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTGTCCTAATACAAGTTaGGTCAAAACGAAACCATTG +
Preference number: 3 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHCPNTS*VKTKPL
Trigger: CAATGGTTTCGTTTTGACCAAACTTGTATTAGGACA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAACACTCTTCTGGTTCTaGTTCAAGTGGTTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKTLFWF*FKWLAF
Trigger: AAAAGCCAACCACTTGAACAAGAACCAGAAGAGTGT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CCA 72 bp CTGAAAAAGAAATCAGCAGTGGAAAGAACATACTTGTaGGCACTTCAGATGTTCACTAAAAGCCTTAAAGCA +
Preference number: 3 (lower is better)
Translates to: LKKKSAVERTYL*ALQMFTKSLKA
Trigger: TGCTTTAAGGCTTTTAGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTCCACTGCTGATTTCTTTTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
3UTR-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTGTCCTAATACAAGTTaGGTCAAAACGAAACCATTG +
Preference number: 3 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKCPNTS*VKTKPL
Trigger: CAATGGTTTCGTTTTGACCAAACTTGTATTAGGACA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
3UTR GCA 72 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTaGCATTTACAATATAAGCCCAAATATTTTTGCAAC +
Preference number: 3 (lower is better)
Translates to: KLIEFDSYQGNT*HLQYKPKYFCN
Trigger: GTTGCAAAAATATTTGGGCTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCATATGGAAGTAAGTTaGAAACTCGCTAAATGTCAC +
Preference number: 3 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFHMEVS*KLAKCH
Trigger: GTGACATTTAGCGAGTTTCAAACTTACTTCCATATG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGACCGACCGGGGCGAGCTaGGGGGCAGGCGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRPTGAS*GAGGSG
Trigger: ACCAGACCCGCCTGCCCCTCAGCTCGCCCCGGTCGG...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGAGCGGTGCAGCAGAGCTaGAGGGGCTTGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRAVQQS*RGLEQG
Trigger: GCCTTGCTCCAAGCCCCTGCAGCTCTGCTGCACCGC...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATAGCTACCCGACTTGCTaGGCCCTCCGCCGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHSYPTC*ALRRRA
Trigger: AGCGCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCT...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGGCGTTGCTCTCCAAGTaGGCGGGCGCCCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMALLSK*AGAPES
Trigger: GGACTCGGGGGCGCCCGCGCACTTGGAGAGCAACGC...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTTGTTCCCGATCACCGTaGCGGCCCCTTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPCSRSP*RPLAPP
Trigger: CGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACA...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGGGTAGCTACCCGACTTaGTGCGCCCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMGSYPT*CALRRR
Trigger: GCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCTACC...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACCCCTCACCGTGGCGTTaGTCTCCAAGTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNPSPWR*SPSARA
Trigger: CGCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGG...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGCGTTGCGCGGCACCTaGAGCTCCGCGGTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHALRGT*SSAVSF
Trigger: GAACGACACCGCGGAGCTGCAGGTGCCGCGCAACGC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGACGGTCTTGGGGTCGATaGAGAAGAGCTCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRRSWGR*RRAPAR
Trigger: GCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACCG...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTCTCCCGCTAGGGTGCTaGAAATCTACTCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPLPLGC*KSTPAR
Trigger: CCGGGCGGGAGTAGATTTGCAGCACCCTAGCGGGAG...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCCGCCGCCGCGCTCTaGAGGCGGAAGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWSAAAL*RRKPRL
Trigger: CAGCCTGGGCTTCCGCCTGCAGAGCGCGGCGGCGGA...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGGAGGAGCCCGCTGTCTaGGTCCACGTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMEEPAV*VHVQQV
Trigger: CACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTC...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTGGGACAGCTGGCACTTaGCATTGTGGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPGTAGT*HCGGTG
Trigger: CCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCC...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGTACGGTGGCGGAACGTaGAGGCTCGCCACCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMYGGGT*RLATVQ
Trigger: CTGGACGGTGGCGAGCCTCCACGTTCCGCCACCGTA...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGACTGTCACCCTCACCGTaGCGTTGCTCTCCAAGTGCG +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRLSPSP*RCSPSA
Trigger: CGCACTTGGAGAGCAACGCCACGGTGAGGGTGACAG...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTAGTTCTCCTCAAGCTTaGAGGGGACGGAACCCCCGG +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPSSPQA*RGRNPR
Trigger: CCGGGGGTTCCGTCCCCTTCAAGCTTGAGGAGAACT...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCCACGATCTCGTAGGTaGGACGCCCGCTCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPPRSRR*DARSRR
Trigger: TCGGCGAGAGCGGGCGTCTCACCTACGAGATCGTGG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGGGTGAGAAGCTGCGGTaGAGCAGAGCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMGEKLR*SRAAGA
Trigger: AGCCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACC...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGCCTCTGCACCCGAGCTaGGGCACCCGGTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLPLHPS*GTRWSL
Trigger: GAGAGACCACCGGGTGCCGCAGCTCGGGTGCAGAGG...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAAGCCCAGGCCAGCGTTaGGCGGCACCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLSPGQR*AAPAAP
Trigger: CGGAGCTGCAGGTGCCGCGCAACGCTGGCCTGGGCT...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACCTAGGGCGCGCACAGTaGTCACCAGATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNLGRAQ*SPDSPG
Trigger: GCCTGGGCTATCTGGTGAGCACTGTGCGCGCCCTAG...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTAGGTGCAAGGCTCGATaGACGCCTTGGTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPRCKAR*TPWLGC
Trigger: GCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCT...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCCAGTTCTGGGAACTTaGTGCCGTCGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMPVLGT*CRRRGT
Trigger: AGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGG...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCTGTCGTTCTGCAGCGTaGGGAGCACGATCACTGGCG +
Preference number: 4 (lower is better)
Translates to: SCSRTAPISLESRLALECCRSAA*GARSLA
Trigger: CGCCAGTGATCGTGCTCCCCACGCTGCAGAACGACA...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTCGTGATCGTCGCGCGTaGGCAGGTAGGTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITRDRRA*AGRCGA
Trigger: GGCTCCGCACCTACCTGCTCACGCGCGACGATCACG...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATCGTAGAGCCCTTTGGTaGACCGAGGCGGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHRRALW*TEAGCR
Trigger: ACGACAACCCGCCTCGGTTCACCAAAGGGCTCTACG...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGAGAAAGGGTGCAGCGTaGGGATCTCGCCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMRKGAA*GSRRWT
Trigger: CGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCT...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACGATGAGCTTGGCCACTaGGGACAGGGTAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNDELGH*GQGRLA
Trigger: GGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATC...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGAGAGCTGCAGGGGCTTaGAGCAAGGCGGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMRAAGA*SKAVAS
Trigger: GGAAGCCACCGCCTTGCTCCAAGCCCCTGCAGCTCT...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGACCTCGAGGGACAGCTaGCACTTGGCATTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMTSRDS*HLALWR
Trigger: CCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGT...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTTCGCTCAGCGCCCCCTaGCGCACGGAGACGAAACCG +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITSLSAP*RTETKP
Trigger: CGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAGCGA...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCGATACGGTGCCGTTCTaGCCCAGGTCGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPDTVPF*PRSGSW
Trigger: CCAGGATCCCGACCTGGGCCAGAACGGCACCGTATC...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CAA 72 bp GAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTaGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGG +
Preference number: 4 (lower is better)
Translates to: EPFVEVQGSMHA*VGLLDAEGTSW
Trigger: CCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGAGCACGAGCGTATGGTaGTTCTGTTGCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMSTSVW*FCCSRS
Trigger: GGACCGCGAGCAACAGAATCACCATACGCTCGTGCT...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACTGGCGTTCAGATCGATaGCCACTGTACCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNWRSDR*PLYPAE
Trigger: CTCCGCTGGGTACAGTGGTCATCGATCTGAACGCCA...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGCAGCCCGCGTGCCCCTaGGGGACAGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWQPACP*GTVRLL
Trigger: CAACAACCTGACTGTCCCTCAGGGGCACGCGGGCTG...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCTCAGTGGGCAAGTACTaGCTGCTTGCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSSVGKY*LLASAR
Trigger: CCTGGCTGAAGCAAGCAGTCAGTACTTGCCCACTGA...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACTGGGTGAGAAGCTaGGGTGCAGCAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMHWVRS*GAAELQ
Trigger: CTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTG...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCCCAGGTCTCGGGCCTaGACGTCAATCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPPRSRA*TSISSI
Trigger: GATGCTGGAGATTGACGTGCAGGCCCGAGACCTGGG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGATGCGGCAGTTGTAAGTaGGGATCTCCTTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRCGSCK*GSPCSR
Trigger: GCGAGAACAAGGAGATCCGCACTTACAACTGCCGCA...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATACGCCTTGGTTGGGCTaGTTGATGCTGAGGGGACCT +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHTPWLG*LMLRGP
Trigger: AGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGT...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATCAGGAGCAATCGGACTaGAGGAGCCAGAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHQEQSD*RSQRGS
Trigger: ACTCCCTCTCTGGCTCCTCCAGTCCGATTGCTCCTG...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGGGTCGATGCGCTGCTTaGTGTAGAGGAGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMGRCAA*CRGARC
Trigger: ACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACC...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGACTTTGCAGTGGGCTaGGATAGGGTTAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHDFAVG*DRVRPQ
Trigger: CTGGGGCCTAACCCTATCCCAGCCCACTGCAAAGTC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGAGCGCAGGGCGTAGATaGCCCCGTTCGTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMSAGRR*PRSWDS
Trigger: TGAATCCCACGAACGGGGCCATCTACGCCCTGCGCT...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACGGGGAGCACGATCACTaGCGCGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNGEHDH*RVVIHV
Trigger: GACGTGAATGACAACGCGCCAGTGATCGTGCTCCCC...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCACTCGCCATTCACCCGTaGTACCCCCTCGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSLAIHP*YPLGKG
Trigger: TCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAG...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTCACTGGAATCCCGGCTaGCTCTGGAATGCACATCTG +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPHWNPG*LWNAHL
Trigger: CAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTG...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CAA 72 bp CTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTTGGTaGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLRCKARCTPW*GCLMLRGPLGG
Trigger: TCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CAA 72 bp CTGGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTaGAGGTGCAAGGCTCGATGCACGCCTTGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LVLLHSHPGSLL*RCKARCTPWLG
Trigger: GCCCAACCAAGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCGGGAGGCTCAAACTTaGGCGATGAGGCAGGCGATA +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPREAQT*AMRQAI
Trigger: TATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGATCTCGTCTAGAATCTTaGTCGCGAACGACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRSRLES*SRTTWW
Trigger: CCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGA...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCATCGCTCCCGCTAGGGTaGTGCAAATCTACTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSSLPLG*CKSTPA
Trigger: GGCGGGAGTAGATTTGCAGCACCCTAGCGGGAGCGA...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGGACATGTCCCAGTGGTaGTGCTCGCCATTCACCCGT +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMDMSQW*CSPFTR
Trigger: ACGGGTGAATGGCGAGCAGCACCACTGGGACATGTC...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCAGCTGCGGCACCCGGTaGTCTCTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPSCGTR*SLLILL
Trigger: GAGCAGAATAAGGAGAGACCACCGGGTGCCGCAGCT...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTAGATCTCCTTGTCGTTaGCGAACACCTCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPRSPCR*RTPRGT
Trigger: TGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCT...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCCCGGGCTGTTGTCGTTaGAGTCAATCACCTTCACGT +
Preference number: 4 (lower is better)
Translates to: SCSRTAPISLESRLALECPGCCR*SQSPSR
Trigger: ACGTGAAGGTGATTGACTCCAACGACAACAGCCCGG...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACTCGATCTCAAACAGGTaGTCGTCGTTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNSISNR*SSLPST
Trigger: CGTGGACGGCAACGACGACCACCTGTTTGAGATCGA...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATTGCCCAGATCCCTGTTaGGGTGGTCAAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHCPDPC*GGQAAQ
Trigger: TTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCA...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTTCCCCAGCGCACCGTaGAATGTCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWFPSAP*NVCLLR
Trigger: GCGCAGCAAGCAGACATTTCACGGTGCGCTGGGGAA...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTTCCTGCGGCTGGGGGTaGGCCAGGGGTTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLSCGWG*ARGFVS
Trigger: AGAGACGAAACCCCTGGCTCACCCCCAGCCGCAGGA...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACCAATCACCTTCACGTTaGTCTGTACGGTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNQSPSR*SVRWRN
Trigger: GTTCCGCCACCGTACAGATCAACGTGAAGGTGATTG...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTGCTCAGAGTCACGATaGGCGGCAGCGACATGTCCC +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWCSESR*AAATCP
Trigger: GGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCA...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGTGCTCACCACGTTCATaGCGTTCATGGCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMCSPRS*RSWRSS
Trigger: AGAGGAACGCCATGAACGTCATGAACGTGGTGAGCA...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCGACCGGGGCGAGCTaGGGGGCAGGCGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPTGAS*GAGGSG
Trigger: ACCAGACCCGCCTGCCCCTCAGCTCGCCCCGGTCGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCTCTGCATTTTCAGCCTaGTTGGCTGCAGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSSAFSA*LAAGNC
Trigger: ACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGA...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCGATCTAATCTTGCATTaGTGGCTGAGGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPDLILH*WLRQRR
Trigger: CCGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATC...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGGAAATGTCTGCTTGCTaGGCGGGCCGGTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMEMSAC*AGRSVF
Trigger: GAAAACAGACCGGCCCGCGCAGCAAGCAGACATTTC...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGGCAGTCGAGCATCCCTaGCGATGTTCCCGATCACCG +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWAVEHP*RCSRSP
Trigger: CGGTGATCGGGAACATCGGCAGGGATGCTCGACTGC...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCGGCGTCGGGGTCATGTaGGCTGGTGAGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFGVGVM*AGEGEA
Trigger: CGCTTCCCCCTCACCAGCGCACATGACCCCGACGCC...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTCCTCATAGTCCAGATTaGCCTTCACACGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPPHSPD*PSHGLG
Trigger: GCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGG...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAGGCAGGGGTCTCGCTTaGATTAGTCCCTTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSGRGLA*ISPLSG
Trigger: ACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCC...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTCTAATCTTGCATTGCTaGCTGAGGCAGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITLILHC*LRQRRR
Trigger: CCGCCGCCGCTGCCTCAGCCAGCAATGCAAGATTAG...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAACTCTTCACATCGAGTaGGGGAGGGAGCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSTLHIE*GREQGG
Trigger: ACCTCCCTGCTCCCTCCCCCACTCGATGTGAAGAGT...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGCTGGATGACCAGTTCTaGGAACTTGGTGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLLDDQF*ELGAVA
Trigger: GGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAG...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTTCCACCAAGTAGGATaGCGCCTCGAAGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLFHQVG*RLEDRA
Trigger: AGCCCGGTCTTCGAGGCGCCATCCTACTTGGTGGAA...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGCGGAGACGAAACCGATaGACGGCGCATTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLRRRNR*TAHCRC
Trigger: GCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCG...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCCCCAGGTCGGGATCCTaGGCGAGCACAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFPRSGS*ASTEPR
Trigger: CCTGGGCTCTGTGCTCGCCCAGGATCCCGACCTGGG...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
3UTR CAA 72 bp AACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTaGGTCACTGTCAGCCTGATCACTGTCCCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: NRHVTAGAFVSV*VTVSLITVPVP
Trigger: GGGCACGGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTAGCATCCGCACTGGGTaGGAAGCTGCGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLSIRTG*EAAVQQ
Trigger: CTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCT...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCAGGCACGTAGCTGCTaGAAGAGTAGAGCACTTCAC +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPQARSC*KSRALH
Trigger: GTGAAGTGCTCTACTCTTTCAGCAGCTACGTGCCTG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGAGAAATTCTTACTTGCTaGTCGCCTCCCGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: SMHALVGLLDAEGTSWRREILTC*SPPVMK
Trigger: TTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTC...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTTCCACGTCCAGCAGGTaGGGTGCGGAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLSTSSR*GAEFSS
Trigger: GCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGA...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCGTTGCTCTCCAAGTaGGCGGGCGCCCCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHALLSK*AGAPES
Trigger: GGACTCGGGGGCGCCCGCGCACTTGGAGAGCAACGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTATGTCCCAGTGGTGCTaGTCGCCATTCACCCGTGGT +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITMSQWC*SPFTRG
Trigger: ACCACGGGTGAATGGCGAGCAGCACCACTGGGACAT...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTGGGCAAGTACTGACTaGTTGCTTCAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLWASTD*LLQPGL
Trigger: GAGCCCTGGCTGAAGCAAGCAGTCAGTACTTGCCCA...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGAGAGCACTTCACCATTaGGACCTTCATCGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLRALHH*DLHRRR
Trigger: CCGACGCCGATGAAGGTCCCAATGGTGAAGTGCTCT...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTCGTCCCGCGCCACGATaGTCACGTTGTACTCGTCTT +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITRPAPR*SRCTRL
Trigger: AAGACGAGTACAACGTGACCATCGTGGCGCGGGACG...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTCCACCCAGCTGCGGGTaGCTGTACTCGGCGATGCGG +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGPPSCG*LYSAMR
Trigger: CCGCATCGCCGAGTACAGCCACCCGCAGCTGGGTGG...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGTTATGGACATCCGAGTaGCAGGGGTCTCGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMLWTSE*QGSRLH
Trigger: ATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAA...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCAGGCTGGCTCTTTCTaGGTCCTTAAACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMQAGSF*VLKRGA
Trigger: AGCTCCACGTTTAAGGACCCAGAAAGAGCCAGCCTG...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTGCTGAGGGGACCTCTTaGAGGAGAGGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLAEGTS*RRGLRA
Trigger: TGCCCTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGC...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGCTCGATGCACGCCTTaGTTGGGCTGCTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITARCTP*LGCLML
Trigger: CAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGC...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATGTTGGAGGCCGGTTTaGGATACATCACCTCCGACC +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLCWRPV*DTSPPT
Trigger: GGTCGGAGGTGATGTATCTCAAACCGGCCTCCAACA...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGCAGGGAGCCTTTTGTTaGGGTGCAAGGCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWQGAFC*GARLDA
Trigger: TGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTG...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCATCTGATCGGAAGCCATaGAGGGAGGGTCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSSDRKP*REGLLV
Trigger: AACCAAGAGACCCTCCCTTCATGGCTTCCGATCAGA...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCGCTACTGAAATACTTTaGACAAACTGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSATEIL*TNCCLL
Trigger: CAGCAGGCAGCAGTTTGTTCAAAGTATTTCAGTAGC...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCCGCCGCCGCGCTCTaGAGGCGGAAGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSAAAL*RRKPRL
Trigger: CAGCCTGGGCTTCCGCCTGCAGAGCGCGGCGGCGGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGCTACCCGACTTGCTaGGCCCTCCGCCGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSYPTC*ALRRRA
Trigger: AGCGCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGGCGTCGGGGTCATGTaGGCTGGTGAGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHGVGVM*AGEGEA
Trigger: CGCTTCCCCCTCACCAGCGCACATGACCCCGACGCC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTACATCCACAGACTCTCTaGCCAGATCCCTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLHPQTL*PDPCWG
Trigger: ACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATG...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACGAAAGCAGCAACAGATaGAAAGGTACATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNESSNR*KGTSQT
Trigger: GGTCTGGGATGTACCTTTCCATCTGTTGCTGCTTTC...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCCTGGATCTCTACCTTaGTCATGCAGATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPPGSLP*SCRSPC
Trigger: ACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTAGTCCAAAGAGGCCGTaGTCGTCGCGCGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGSPKRP*SSRVSR
Trigger: CCTGCTCACGCGCGACGATCACGGCCTCTTTGGACT...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTCGTGAAATGTCTGCTTaGTGCGCGGGCCGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLREMSA*CAGRSV
Trigger: AACAGACCGGCCCGCGCAGCAAGCAGACATTTCACG...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCCTCTGCACCCGAGCTaGGGCACCCGGTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKPLHPS*GTRWSL
Trigger: GAGAGACCACCGGGTGCCGCAGCTCGGGTGCAGAGG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGGTAGCTACCCGACTTaGTGCGCCCTCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFGSYPT*CALRRR
Trigger: GCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCTACC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCGGGACTCGCGGTCGATaGGCTGCTTGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFGTRGR*AAWCRG
Trigger: TCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCC...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCCTCACCGTGGCGTTaGTCTCCAAGTGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPSPWR*SPSARA
Trigger: CGCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGCCCAGGCCAGCGTTaGGCGGCACCTGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSPGQR*AAPAAP
Trigger: CGGAGCTGCAGGTGCCGCGCAACGCTGGCCTGGGCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTTCCTCCCAGAAAGGGTaGAGCGTGCGGATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGSSQKG*SVRISP
Trigger: CGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGA...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CAAATGTACAAAAAGTCTTTTTCCCAGTGGGATTCACAGTTTCGTAAGTCTCAGTTGCCCCCACCCAGCTaGGGGTGGCTGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: QMYKKSFSQWDSQFRKSQLPPPS*GWLYSA
Trigger: CGCCGAGTACAGCCACCCGCAGCTGGGTGGGGGCAA...CTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCGCTCAGCGCCCCCTaGCGCACGGAGACGAAACCG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSLSAP*RTETKP
Trigger: CGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAGCGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCCAGGTCGGGATCCTaGGCGAGCACAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPRSGS*ASTEPR
Trigger: CCTGGGCTCTGTGCTCGCCCAGGATCCCGACCTGGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAAGATGGCCCCGTTCGTaGGATTCACAGACACATAGG +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLRWPRS*DSQTHR
Trigger: CCTATGTGTCTGTGAATCCCACGAACGGGGCCATCT...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTAGCGACATGTCCCAGTaGTGCTGCTCGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLSDMSQ*CCSPFT
Trigger: GGTGAATGGCGAGCAGCACCACTGGGACATGTCGCT...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTGTCTGTCTGAATTATaGACATCCGAGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLCLSEL*TSEWQG
Trigger: CCCCTGCCACTCGGATGTCCATAATTCAGACAGACA...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACGTGATCGTCGCGCGTaGGCAGGTAGGTGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKRDRRA*AGRCGA
Trigger: GGCTCCGCACCTACCTGCTCACGCGCGACGATCACG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTCCAGAGCCTTCTGGATaGCCAGTTCTGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLPEPSG*PVLGTW
Trigger: CCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGG...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCACGATCTCGTAGGTaGGACGCCCGCTCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPRSRR*DARSRR
Trigger: TCGGCGAGAGCGGGCGTCTCACCTACGAGATCGTGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGCGGCGGCGGCGGACTaGATCTACCAGCCAAGCGTA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKAAAAD*IYQPSV
Trigger: TACGCTTGGCTGGTAGATGCAGTCCGCCGCCGCCGC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGAGGAGCCCGCTGTCTaGGTCCACGTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKEEPAV*VHVQQV
Trigger: CACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGCGTTGCGCGGCACCTaGAGCTCCGCGGTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKALRGT*SSAVSF
Trigger: GAACGACACCGCGGAGCTGCAGGTGCCGCGCAACGC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCTAGGGCGCGCACAGTaGTCACCAGATAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHLGRAQ*SPDSPG
Trigger: GCCTGGGCTATCTGGTGAGCACTGTGCGCGCCCTAG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTGCCCCCACCCAGCTaGGGGTGGCTGTACTCGGCG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFLPPPS*GWLYSA
Trigger: CGCCGAGTACAGCCACCCGCAGCTGGGTGGGGGCAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGTCCTCCACTTCGCTCTaGACCAGCATGATATCATTT +
Preference number: 4 (lower is better)
Translates to: GFASQPSREPFVEVQGSMSSTSL*TSMISF
Trigger: AAATGATATCATGCTGGTGCAGAGCGAAGTGGAGGA...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATATTTGTGCGGTAATCTaGATTTTCAGCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHICAVI*IFSLIG
Trigger: GCCAATCAGGCTGAAAATGCAGATTACCGCACAAAT...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGCAATGAGAATAGTGTaGTCTCGCTTGTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHAMRIV*SRLSFP
Trigger: TGGAAAAGACAAGCGAGAGCACACTATTCTCATTGC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGATCTGCAAAGACCCTTaGCATCTGATCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLICKDP*HLIGSH
Trigger: ATGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGAT...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCTTGGAGCAAGGCGGTaGCTTCCTGCGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKLGARR*LPAAGG
Trigger: ACCCCCAGCCGCAGGAAGCCACCGCCTTGCTCCAAG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCGGTCTTGGGGTCGATaGAGAAGAGCTCCCGCACGC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHRSWGR*RRAPAR
Trigger: GCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACCG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGATACGGTGCCGTTCTaGCCCAGGTCGGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHDTVPF*PRSGSW
Trigger: CCAGGATCCCGACCTGGGCCAGAACGGCACCGTATC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCCACCCAGCTGCGGGTaGCTGTACTCGGCGATGCGG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFPPSCG*LYSAMR
Trigger: CCGCATCGCCGAGTACAGCCACCCGCAGCTGGGTGG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCCTGCGGCTGGGGGTaGGCCAGGGGTTTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSCGWG*ARGFVS
Trigger: AGAGACGAAACCCCTGGCTCACCCCCAGCCGCAGGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGTCCAAAGAGGCCGTaGTCGTCGCGCGTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSPKRP*SSRVSR
Trigger: CCTGCTCACGCGCGACGATCACGGCCTCTTTGGACT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCAGCCCGCGTGCCCCTaGGGGACAGTCAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFQPACP*GTVRLL
Trigger: CAACAACCTGACTGTCCCTCAGGGGCACGCGGGCTG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTAGTGAAATTCTTACTTaGTGCTCGCCTCCCGTGATG +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITSEILT*CSPPVM
Trigger: CATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACT...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCTCCCGCTAGGGTGCTaGAAATCTACTCCCGCCCGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLPLGC*KSTPAR
Trigger: CCGGGCGGGAGTAGATTTGCAGCACCCTAGCGGGAG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGCGGTGCAGCAGAGCTaGAGGGGCTTGGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKAVQQS*RGLEQG
Trigger: GCCTTGCTCCAAGCCCCTGCAGCTCTGCTGCACCGC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGGTCTCTCCTTATTCTaGTCAAGTTCCCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITGLSLF*SSSLNL
Trigger: CAGGTTCAGGGAACTTGAGCAGAATAAGGAGAGACC...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGTTCCCGATCACCGTaGCGGCCCCTTGCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHICSRSP*RPLAPP
Trigger: CGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTTCAAAAGCCTTGGTCTaGTCGAAGTTAAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITSKALV*SKLKER
Trigger: GCGCTCCTTTAACTTCGAGCAGACCAAGGCTTTTGA...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCCGCGGTGTCGTTCTaGAGCGTGGGGAGCACGATC +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSAVSF*SVGSTI
Trigger: GATCGTGCTCCCCACGCTGCAGAACGACACCGCGGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTACAGGTGGTCGTCGTTaGCGTCCACGATCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGTGGRR*RPRSRR
Trigger: CCTACGAGATCGTGGACGGCAACGACGACCACCTGT...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGAAAGGGTGCAGCGTaGGGATCTCGCCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKRKGAA*GSRRWT
Trigger: CGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACAGGTGCAAGGCTCGATaGACGCCTTGGTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHRCKAR*TPWLGC
Trigger: GCAGCCCAACCAAGGCGTGCATCGAGCCTTGCACCT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTACGGTGGCGGAACGTaGAGGCTCGCCACCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFYGGGT*RLATVQ
Trigger: CTGGACGGTGGCGAGCCTCCACGTTCCGCCACCGTA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCTGTCACCCTCACCGTaGCGTTGCTCTCCAAGTGCG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHLSPSP*RCSPSA
Trigger: CGCACTTGGAGAGCAACGCCACGGTGAGGGTGACAG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTTGCGGATCTCGCCGCTaGACGGGTCGATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGCGSRR*TGRSQT
Trigger: TGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCA...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGCTGAGGGGACCTCTTaGAGGAGAGGGCTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKAEGTS*RRGLRA
Trigger: TGCCCTGAGCCCTCTCCTCCAAGAGGTCCCCTCAGC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCAGCACCCATCTCACTaGAATCCCGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHQHPSH*NPGWLW
Trigger: CCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGCATCCGCACTGGGTaGGAAGCTGCGGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISIRTG*EAAVQQ
Trigger: CTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTAGGGCGCGTTGTCGTTaGTGTCCTGGATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGRARCR*CPGSLP
Trigger: AGGTAGAGATCCAGGACATCAACGACAACGCGCCCT...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTGGTCACTGTCAGCCTaGTCACTGTCCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKWSLSA*SLSPCP
Trigger: TGGGCACGGGGACAGTGATCAGGCTGACAGTGACCA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCGTGAAATGTCTGCTTaGTGCGCGGGCCGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHREMSA*CAGRSV
Trigger: AACAGACCGGCCCGCGCAGCAAGCAGACATTTCACG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCGCTCCCGCTAGGGTaGTGCAAATCTACTCCCGCC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSLPLG*CKSTPA
Trigger: GGCGGGAGTAGATTTGCAGCACCCTAGCGGGAGCGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGGTGAGAAGCTGCGGTaGAGCAGAGCTGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFGEKLR*SRAAGA
Trigger: AGCCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCCACGTCCAGCAGGTaGGGTGCGGAGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSTSSR*GAEFSS
Trigger: GCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCCAGGTCTCGGGCCTaGACGTCAATCTCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPRSRA*TSISSI
Trigger: GATGCTGGAGATTGACGTGCAGGCCCGAGACCTGGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCCTAGGACCCGACACTaGAGCTGTCCGTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHPRTRH*SCPFLP
Trigger: TGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCCGCGGTGTCGTTCTaGAGCGTGGGGAGCACGATC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSAVSF*SVGSTI
Trigger: GATCGTGCTCCCCACGCTGCAGAACGACACCGCGGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACACAGGTGGTCGTCGTTaGCGTCCACGATCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHTGGRR*RPRSRR
Trigger: CCTACGAGATCGTGGACGGCAACGACGACCACCTGT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCCTCCCAGAAAGGGTaGAGCGTGCGGATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSSQKG*SVRISP
Trigger: CGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGATGAGCTTGGCCACTaGGGACAGGGTAGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKDELGH*GQGRLA
Trigger: GGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCAGCCTTTTGTTGAGGTaGAAGGCTCGATGCACGCCT +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFSLLLR*KARCTP
Trigger: AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCT...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACACTCTTCACATCGAGTaGGGGAGGGAGCAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHTLHIE*GREQGG
Trigger: ACCTCCCTGCTCCCTCCCCCACTCGATGTGAAGAGT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGAGCTGCAGGGGCTTaGAGCAAGGCGGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFRAAGA*SKAVAS
Trigger: GGAAGCCACCGCCTTGCTCCAAGCCCCTGCAGCTCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGGGACAGCTGGCACTTaGCATTGTGGCGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKGTAGT*HCGGTG
Trigger: CCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACCAGTTCTGGGAACTTaGTGCCGTCGCCGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKPVLGT*CRRRGT
Trigger: AGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTCGGTCCAGAGCCTTCTaGATGACCAGTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGRSRAF*MTSSGN
Trigger: GTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCG...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCGGAGACGAAACCGATaGACGGCGCATTGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHRRRNR*TAHCRC
Trigger: GCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTGTCGTTCTGCAGCGTaGGGAGCACGATCACTGGCG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKCRSAA*GARSLA
Trigger: CGCCAGTGATCGTGCTCCCCACGCTGCAGAACGACA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTGCGGATCTCGCCGCTaGACGGGTCGATCTCAAACA +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHCGSRR*TGRSQT
Trigger: TGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCTCGCCATTCACCCGTaGTACCCCCTCGGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHILAIHP*YPLGKG
Trigger: TCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCAAGTCTTTTTCCCAGTaGGATTCACAGTTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPKSFSQ*DSQFRK
Trigger: CTTACGAAACTGTGAATCCCACTGGGAAAAAGACTT...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTCAGCCAGGGCTCCTaGTTTTGCTTCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFFSQGS*FCFTAI
Trigger: GATGGCTGTGAAGCAAAACCAGGAGCCCTGGCTGAA...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGGATATTGACTGTCAGTaGGCAAGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWDIDCQ*ASTDCL
Trigger: CAAGCAGTCAGTACTTGCCCACTGACAGTCAATATC...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTCCCCAGCGCACCGTaGAATGTCTGCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIFPSAP*NVCLLR
Trigger: GCGCAGCAAGCAGACATTTCACGGTGCGCTGGGGAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCGGGAGGCTCAAACTTaGGCGATGAGGCAGGCGATA +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKREAQT*AMRQAI
Trigger: TATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGTTCTCCTCAAGCTTaGAGGGGACGGAACCCCCGG +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISSPQA*RGRNPR
Trigger: CCGGGGGTTCCGTCCCCTTCAAGCTTGAGGAGAACT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCGTAGAGCCCTTTGGTaGACCGAGGCGGGTTGTCGT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRRALW*TEAGCR
Trigger: ACGACAACCCGCCTCGGTTCACCAAAGGGCTCTACG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGCTCAGAGTCACGATaGGCGGCAGCGACATGTCCC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHICSESR*AAATCP
Trigger: GGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCTGGTCACTGTCAGCCTaGTCACTGTCCCCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: NISFNCRYKEICAVICIFWSLSA*SLSPCP
Trigger: TGGGCACGGGGACAGTGATCAGGCTGACAGTGACCA...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGAAATGTCTGCTTGCTaGGCGGGCCGGTCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHEMSAC*AGRSVF
Trigger: GAAAACAGACCGGCCCGCGCAGCAAGCAGACATTTC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACACTGGGTGAGAAGCTaGGGTGCAGCAGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKHWVRS*GAAELQ
Trigger: CTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGCAGTCGAGCATCCCTaGCGATGTTCCCGATCACCG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKAVEHP*RCSRSP
Trigger: CGGTGATCGGGAACATCGGCAGGGATGCTCGACTGC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGGGACTCGCGGTCGATaGGCTGCTTGGTGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKGTRGR*AAWCRG
Trigger: TCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CAAATGTACAAAAAGTCTTTTTCCCAGTGGGATTCACAGTTTCGTAAGTCTCAGCCTAGGACCCGACACTaGAGCTGTCCGTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QMYKKSFSQWDSQFRKSQPRTRH*SCPFLP
Trigger: TGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGG...CTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGATGTCCCAGTGGTGCTaGTCGCCATTCACCCGTGGT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKMSQWC*SPFTRG
Trigger: ACCACGGGTGAATGGCGAGCAGCACCACTGGGACAT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGACATGTCCCAGTGGTaGTGCTCGCCATTCACCCGT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKDMSQW*CSPFTR
Trigger: ACGGGTGAATGGCGAGCAGCACCACTGGGACATGTC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGGCTGTACTCGGCGATaGGGCAGTTGTAAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKGCTRR*GSCKCG
Trigger: TCCGCACTTACAACTGCCGCATCGCCGAGTACAGCC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCGAACAAACTGCTGCCTaGTGCCCATGTAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFEQTAA*CPCNWA
Trigger: AGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTC...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGACGCCTTGGTTGGGCTaGTTGATGCTGAGGGGACCT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKTPWLG*LMLRGP
Trigger: AGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCTAATCTTGCATTGCTaGCTGAGGCAGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFLILHC*LRQRRR
Trigger: CCGCCGCCGCTGCCTCAGCCAGCAATGCAAGATTAG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCTACAGCATCCGCACTaGGTGAGAAGCTGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLQHPH*VRSCGA
Trigger: TGCACCGCAGCTTCTCACCCAGTGCGGATGCTGTAG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGAGCTGCGGCACCCGGTaGTCTCTCCTTATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSCGTR*SLLILL
Trigger: GAGCAGAATAAGGAGAGACCACCGGGTGCCGCAGCT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGGTCGATGCGCTGCTTaGTGTAGAGGAGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFGRCAA*CRGARC
Trigger: ACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTACCTCGAGGGACAGCTaGCACTTGGCATTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFTSRDS*HLALWR
Trigger: CCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGCGCAGGGCGTAGATaGCCCCGTTCGTGGGATTCA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISAGRR*PRSWDS
Trigger: TGAATCCCACGAACGGGGCCATCTACGCCCTGCGCT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLCCPCN*ALRENC
Trigger: ACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCA...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGCTCGATGCACGCCTTaGTTGGGCTGCTTGATGCTG +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKARCTP*LGCLML
Trigger: CAGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCAATCCCGGCTGGCTCTaGAATGCACATCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFNPGWL*NAHLQR
Trigger: TCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATT...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCACTGGAATCCCGGCTaGCTCTGGAATGCACATCTG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHHWNPG*LWNAHL
Trigger: CAGATGTGCATTCCAGAGCCAGCCGGGATTCCAGTG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACAGCACCCATCTCACTaGAATCCCGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKQHPSH*NPGWLW
Trigger: CCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAGCCTTAAAGCAGCATTaGTCTTTCTTCATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLALKQH*SFFIPV
Trigger: TACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGC...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGGGCGCGTTGTCGTTaGTGTCCTGGATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKRARCR*CPGSLP
Trigger: AGGTAGAGATCCAGGACATCAACGACAACGCGCCCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCAGAGCCTTCTGGATaGCCAGTTCTGGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPEPSG*PVLGTW
Trigger: CCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAGCACGAGCGTATGGTaGTTCTGTTGCTCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSTSVW*FCCSRS
Trigger: GGACCGCGAGCAACAGAATCACCATACGCTCGTGCT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTGGCGTTCAGATCGATaGCCACTGTACCCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFWRSDR*PLYPAE
Trigger: CTCCGCTGGGTACAGTGGTCATCGATCTGAACGCCA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTGCTCACCACGTTCATaGCGTTCATGGCGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHCSPRS*RSWRSS
Trigger: AGAGGAACGCCATGAACGTCATGAACGTGGTGAGCA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCAGGGAGCCTTTTGTTaGGGTGCAAGGCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKQGAFC*GARLDA
Trigger: TGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCAGTGGGCAAGTACTaGCTGCTTGCTTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSVGKY*LLASAR
Trigger: CCTGGCTGAAGCAAGCAGTCAGTACTTGCCCACTGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGATCTAATCTTGCATTaGTGGCTGAGGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKDLILH*WLRQRR
Trigger: CCGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGGCTGTACTCGGCGATaGGGCAGTTGTAAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKGCTRR*GSCKCG
Trigger: TCCGCACTTACAACTGCCGCATCGCCGAGTACAGCC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGGCAGGGGTCTCGCTTaGATTAGTCCCTTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIGRGLA*ISPLSG
Trigger: ACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTCATGTAATTGGGCTCTaGGGGAAAATTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLHVIGL*GKIVCL
Trigger: CAGACAGACAATTTTCCCGCAGAGCCCAATTACATG...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCAGGGCTCCTGGTTTTaGTTCACAGCCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKQGSWF*FTAIQG
Trigger: TCCCTGGATGGCTGTGAAGCAAAACCAGGAGCCCTG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CAAATGTACAAAAAGTCTTTTTCCCAGTGGGATTCACAGTTTCGTAAGTCTCAGCAGGGCTCCTGGTTTTaGTTCACAGCCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QMYKKSFSQWDSQFRKSQQGSWF*FTAIQG
Trigger: TCCCTGGATGGCTGTGAAGCAAAACCAGGAGCCCTG...CTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTCTGGAATGCACATCTaGAAAGACCCTTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFSGMHI*KDPCHL
Trigger: CAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGA...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACAGGAGCAATCGGACTaGAGGAGCCAGAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKQEQSD*RSQRGS
Trigger: ACTCCCTCTCTGGCTCCTCCAGTCCGATTGCTCCTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACTGGATGACCAGTTCTaGGAACTTGGTGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKLDDQF*ELGAVA
Trigger: GGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCGGTCCAGAGCCTTCTaGATGACCAGTTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKRSRAF*MTSSGN
Trigger: GTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATTCCACCAAGTAGGATaGCGCCTCGAAGACCGGGCT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKFHQVG*RLEDRA
Trigger: AGCCCGGTCTTCGAGGCGCCATCCTACTTGGTGGAA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGACTTTGCAGTGGGCTaGGATAGGGTTAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIDFAVG*DRVRPQ
Trigger: CTGGGGCCTAACCCTATCCCAGCCCACTGCAAAGTC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCGTCCCGCGCCACGATaGTCACGTTGTACTCGTCTT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRPAPR*SRCTRL
Trigger: AAGACGAGTACAACGTGACCATCGTGGCGCGGGACG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGGGGAGCACGATCACTaGCGCGTTGTCATTCACGTC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFGEHDH*RVVIHV
Trigger: GACGTGAATGACAACGCGCCAGTGATCGTGCTCCCC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCGATCTCAAACAGGTaGTCGTCGTTGCCGTCCACG +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSISNR*SSLPST
Trigger: CGTGGACGGCAACGACGACCACCTGTTTGAGATCGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAGCGACATGTCCCAGTaGTGCTGCTCGCCATTCACC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSDMSQ*CCSPFT
Trigger: GGTGAATGGCGAGCAGCACCACTGGGACATGTCGCT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTAGATCCCTGTTGGGGTaGTCAAGCTGCTCAAGAACA +
Preference number: 4 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGRSLLG*SSCSRT
Trigger: TGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCT...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGTCACAGATATATTTTaGAGCTTCCCCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHVTDIF*SFPSAP
Trigger: CGGTGCGCTGGGGAAGCTTCAAAATATATCTGTGAC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTGTTGGAGGCCGGTTTaGGATACATCACCTCCGACC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFCWRPV*DTSPPT
Trigger: GGTCGGAGGTGATGTATCTCAAACCGGCCTCCAACA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCAAGAGACTTTGCTCTaGGGCACTGCTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKQETLL*GTASHT
Trigger: AGTGTGGGAAGCAGTGCCTCAGAGCAAAGTCTCTTG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTGCGGCAGTTGTAAGTaGGGATCTCCTTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKCGSCK*GSPCSR
Trigger: GCGAGAACAAGGAGATCCGCACTTACAACTGCCGCA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTAGTTTTCATCTTGAGTaGCTCCCTAACAGACATGTC +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLSFHLE*LPNRHV
Trigger: GACATGTCTGTTAGGGAGGCACTCAAGATGAAAACT...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGCCTTTTGTTGAGGTaGAAGGCTCGATGCACGCCT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSLLLR*KARCTP
Trigger: AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATGGGCAAGTACTGACTaGTTGCTTCAGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKWASTD*LLQPGL
Trigger: GAGCCCTGGCTGAAGCAAGCAGTCAGTACTTGCCCA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCATCCACAGACTCTCTaGCCAGATCCCTGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFHPQTL*PDPCWG
Trigger: ACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGATG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTCTCACAACTTCCTCTaGATCCACAGACTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHSHNFL*IHRLSA
Trigger: GGCAGAGAGTCTGTGGATGCAGAGGAAGTTGTGAGA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATTTGCTCTGAGGCACTaGTTCCCACACTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKFALRH*FPHSMG
Trigger: CCCCATGGAGTGTGGGAAGCAGTGCCTCAGAGCAAA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGAGCACTTCACCATTaGGACCTTCATCGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRALHH*DLHRRR
Trigger: CCGACGCCGATGAAGGTCCCAATGGTGAAGTGCTCT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAATTAACACACTCTTCTaGTTCTTGTTCAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLINTLF*FLFKWL
Trigger: CAACCACTTGAACAAGAACCAGAAGAGTGTGTTAAT...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGCCCAGATCCCTGTTaGGGTGGTCAAGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHICPDPC*GGQAAQ
Trigger: TTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR CAA 72 bp ATGCTGCTTTTGTTGTTGTCCTTGTTCACCAATCACTaGGTGCAGCTAAGAACTTTATGGAGTGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: MLLLLLSLFTNH*VQLRTLWSDGL
Trigger: CAGCCCATCACTCCATAAAGTTCTTAGCTGCACCAAGTGATTGGTGAACAAGGACAACAACAAAAGCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR CAA 72 bp TCAAGTGGTTGGCTTTTAGTTGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGACATGTCACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSGWLLVEVVFI*SASLTDMSQQE
Trigger: CTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp CAAATGTACAAAAAGTCTTTTTCCCAGTGGGATTCACAGTTTCGTAAGTCTCAGGTCACAGATATATTTTaGAGCTTCCCCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: QMYKKSFSQWDSQFRKSQVTDIF*SFPSAP
Trigger: CGGTGCGCTGGGGAAGCTTCAAAATATATCTGTGAC...CTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACAATCACCTTCACGTTaGTCTGTACGGTGGCGGAAC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKQSPSR*SVRWRN
Trigger: GTTCCGCCACCGTACAGATCAACGTGAAGGTGATTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACAGGCACGTAGCTGCTaGAAGAGTAGAGCACTTCAC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKQARSC*KSRALH
Trigger: GTGAAGTGCTCTACTCTTTCAGCAGCTACGTGCCTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCTCGTCTAGAATCTTaGTCGCGAACGACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSRLES*SRTTWW
Trigger: CCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTGGTTGCTTACTAGGTaGCAGATATTGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFWLLTR*QILTVS
Trigger: ACTGACAGTCAATATCTGTCACCTAGTAAGCAACCA...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCTGATCGGAAGCCATaGAGGGAGGGTCTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSDRKP*REGLLV
Trigger: AACCAAGAGACCCTCCCTTCATGGCTTCCGATCAGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAAGACCCTTGCCATCTaGTCGGAAGCCATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIKTLAI*SEAMKG
Trigger: TCCCTTCATGGCTTCCGATCAGATGGCAAGGGTCTT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAAGACCCTTGCCATCTaGTCGGAAGCCATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKKTLAI*SEAMKG
Trigger: TCCCTTCATGGCTTCCGATCAGATGGCAAGGGTCTT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTGGGGTGGTCAAGCTaGTCAAGAACAGCACCCATC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHILGWSS*SRTAPI
Trigger: GATGGGTGCTGTTCTTGAGCAGCTTGACCACCCCAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCTTGGGGTGGTCAAGCTaGTCAAGAACAGCACCCATC +
Preference number: 4 (lower is better)
Translates to: NISFNCRYKEICAVICIFLGWSS*SRTAPI
Trigger: GATGGGTGCTGTTCTTGAGCAGCTTGACCACCCCAA...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCTCACAACTTCCTCTaGATCCACAGACTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSHNFL*IHRLSA
Trigger: GGCAGAGAGTCTGTGGATGCAGAGGAAGTTGTGAGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCAAGCACCAGAGGTCTaGAATAAAGGCAGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKQAPEV*NKGSCQ
Trigger: CTGGCAACTGCCTTTATTGCAGACCTCTGGTGCTTG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGATCTCCTTGTCGTTaGCGAACACCTCGAGGGACA +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFRSPCR*RTPRGT
Trigger: TGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTATGTCCATTTCGATCTaGTCCGAGGAGAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFMSISI*SEEKEG
Trigger: GCCCTCCTTCTCCTCGGACCAGATCGAAATGGACAT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCATGTCCATTTCGATCTaGTCCGAGGAGAAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NISFNCRYKEICAVICIFMSISI*SEEKEG
Trigger: GCCCTCCTTCTCCTCGGACCAGATCGAAATGGACAT...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCCGGGCTGTTGTCGTTaGAGTCAATCACCTTCACGT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIPGCCR*SQSPSR
Trigger: ACGTGAAGGTGATTGACTCCAACGACAACAGCCCGG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGATGGCCCCGTTCGTaGGATTCACAGACACATAGG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFRWPRS*DSQTHR
Trigger: CCTATGTGTCTGTGAATCCCACGAACGGGGCCATCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTATGGACATCCGAGTaGCAGGGGTCTCGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHILWTSE*QGSRLH
Trigger: ATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGT +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHCCPCN*ALRENC
Trigger: ACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCA...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCAGGCTGGCTCTTTCTaGGTCCTTAAACGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFQAGSF*VLKRGA
Trigger: AGCTCCACGTTTAAGGACCCAGAAAGAGCCAGCCTG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTCAGCCAGGGCTCCTaGTTTTGCTTCACAGCCATC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIFSQGS*FCFTAI
Trigger: GATGGCTGTGAAGCAAAACCAGGAGCCCTGGCTGAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGAGATCCCTGTTGGGGTaGTCAAGCTGCTCAAGAACA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKRSLLG*SSCSRT
Trigger: TGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTGAAAGAACATACTTGTaGGCACTTCAGATGTTCACT +
Preference number: 4 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLERTYL*ALQMFT
Trigger: AGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTC...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGCTTCCCACACTCCATaGGGAAAAGGAAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKASHTP*GKGSRK
Trigger: TTTCCTGCTTCCTTTTCCCCATGGAGTGTGGGAAGC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCAACCTGCAAAACACTaGGGCCAGGAAAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKQPAKH*GQESQT
Trigger: AGTCTGACTTTCCTGGCCCCAGTGTTTTGCAGGTTG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAACGTGGAGCTACTTTaGACAAACTGCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFNVELL*TNCCLL
Trigger: CAGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTCTGCATTTTCAGCCTaGTTGGCTGCAGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISAFSA*LAAGNC
Trigger: ACAGTTCCCTGCAGCCAATCAGGCTGAAAATGCAGA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCTCATAGGCTTCCTTaGAAGCCAAGCACCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSHRLP*KPSTRG
Trigger: ACCTCTGGTGCTTGGCTTTCAAGGAAGCCTATGAGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGTGAAATTCTTACTTaGTGCTCGCCTCCCGTGATG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSEILT*CSPPVM
Trigger: CATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGGTCTCTCCTTATTCTaGTCAAGTTCCCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKGLSLF*SSSLNL
Trigger: CAGGTTCAGGGAACTTGAGCAGAATAAGGAGAGACC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCCTCATAGTCCAGATTaGCCTTCACACGGATTAGGC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIPHSPD*PSHGLG
Trigger: GCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGAACAAACTGCTGCCTaGTGCCCATGTAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFEQTAA*CPCNWA
Trigger: AGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCTGGAATGCACATCTaGAAAGACCCTTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSGMHI*KDPCHL
Trigger: CAGATGGCAAGGGTCTTTGCAGATGTGCATTCCAGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATGTCTGTCTGAATTATaGACATCCGAGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKCLSEL*TSEWQG
Trigger: CCCCTGCCACTCGGATGTCCATAATTCAGACAGACA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACATTTTCAGCCTGATTaGCTGCAGGGAACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKHFQPD*LQGTVA
Trigger: TGCCACAGTTCCCTGCAGCCAATCAGGCTGAAAATG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGATATTGACTGTCAGTaGGCAAGTACTGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHDIDCQ*ASTDCL
Trigger: CAAGCAGTCAGTACTTGCCCACTGACAGTCAATATC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAATCCCGGCTGGCTCTaGAATGCACATCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHINPGWL*NAHLQR
Trigger: TCTTTGCAGATGTGCATTCCAGAGCCAGCCGGGATT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCTACACTGGCTTGGTaGCCAGAAGAGAAGGCACAA +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSTLAW*PEEKAQ
Trigger: TTGTGCCTTCTCTTCTGGCCACCAAGCCAGTGTAGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTTGCTGTTTCTACACTaGCTTGGTGGCCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKLLFLH*LGGQKR
Trigger: TCTCTTCTGGCCACCAAGCCAGTGTAGAAACAGCAA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACCTGGATCTCTACCTTaGTCATGCAGATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKPGSLP*SCRSPC
Trigger: ACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACTAGGTGACAGATATTaGCTGTCAGTGGGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKLGDRY*LSVGKY
Trigger: GTACTTGCCCACTGACAGTCAATATCTGTCACCTAG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTCAAAAGCCTTGGTCTaGTCGAAGTTAAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISKALV*SKLKER
Trigger: GCGCTCCTTTAACTTCGAGCAGACCAAGGCTTTTGA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCCTCCACTTCGCTCTaGACCAGCATGATATCATTT +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSSTSL*TSMISF
Trigger: AAATGATATCATGCTGGTGCAGAGCGAAGTGGAGGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAATCTGCAAAGACCCTTaGCATCTGATCGGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKICKDP*HLIGSH
Trigger: ATGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGAT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGGCATTTTCCCATCTaGTGCTACTTCTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFRHFPI*CYFCKC
Trigger: GCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGAAAGCAGCAACAGATaGAAAGGTACATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFESSNR*KGTSQT
Trigger: GGTCTGGGATGTACCTTTCCATCTGTTGCTGCTTTC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAGGCAGATCCGAAAGTaGAATTCTTACTTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFRQIRK*NSYLLL
Trigger: GAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTGCTCTCTAAAGGTGTaGTTTTGGCATCTCATAGGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFCSLKV*FWHLIG
Trigger: GCCTATGAGATGCCAAAATCACACCTTTAGAGAGCA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGAAATTCTTACTTGCTaGTCGCCTCCCGTGATGAAA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIEILTC*SPPVMK
Trigger: TTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCATGTAATTGGGCTCTaGGGGAAAATTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFHVIGL*GKIVCL
Trigger: CAGACAGACAATTTTCCCGCAGAGCCCAATTACATG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGTTTTCATCTTGAGTaGCTCCCTAACAGACATGTC +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSFHLE*LPNRHV
Trigger: GACATGTCTGTTAGGGAGGCACTCAAGATGAAAACT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACAATAATGCATTTTTCTaGTCCAGTGCTCAAACAGCC +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHNNAFF*SSAQTA
Trigger: GGCTGTTTGAGCACTGGAGCAGAAAAATGCATTATT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTCTTGTTCAAGTGGTTaGCTTTTAGTTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: RMTKHSAFICAINTLFWFSCSSG*LLVEVV
Trigger: AACTACTTCAACTAAAAGCCAACCACTTGAACAAGA...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACAAGTCTTTTTCCCAGTaGGATTCACAGTTTCGTAAG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHKSFSQ*DSQFRK
Trigger: CTTACGAAACTGTGAATCCCACTGGGAAAAAGACTT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGCCTTAAAGCAGCATTaGTCTTTCTTCATCCCTGTA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKALKQH*SFFIPV
Trigger: TACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCAAGTAACCACTGCTaGTACATACATGCATTAAAG +
Preference number: 4 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHASNHC*YIHALK
Trigger: CTTTAATGCATGTATGTACCAGCAGTGGTTACTTGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGGTTGCTTACTAGGTaGCAGATATTGACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIWLLTR*QILTVS
Trigger: ACTGACAGTCAATATCTGTCACCTAGTAAGCAACCA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAAGACCCAGACCTCTTaGAAAACACTACACAATGCA +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKKTQTS*KTLHNA
Trigger: TGCATTGTGTAGTGTTTTTCAAGAGGTCTGGGTCTT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAATTTGTGCGGTAATCTaGATTTTCAGCCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKICAVI*IFSLIG
Trigger: GCCAATCAGGCTGAAAATGCAGATTACCGCACAAAT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGCAATGAGAATAGTGTaGTCTCGCTTGTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFAMRIV*SRLSFP
Trigger: TGGAAAAGACAAGCGAGAGCACACTATTCTCATTGC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATGTAGCTTGGACTACTaGAAGGTCTTTTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKCSLDY*KVFSGL
Trigger: AAGTCCTGAAAAGACCTTGCAGTAGTCCAAGCTACA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGATTAGTCTACGTGTGTaGAGGACAAAATGGACTGTA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKISLRV*RTKWTV
Trigger: TACAGTCCATTTTGTCCTGCACACACGTAGACTAAT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTACCAAGGCAACACTTaGCATTTACAATATAAGCCC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKYQGNT*HLQYKP
Trigger: GGGCTTATATTGTAAATGGCAAGTGTTGCCTTGGTA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATTCATCCCTGTAAAATaGGTTATCACCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKFIPVK*VITRRD
Trigger: ATCCCTCCTGGTGATAACCCATTTTACAGGGATGAA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCTTCATCCCTGTAAAATaGGTTATCACCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: NISFNCRYKEICAVICIFFIPVK*VITRRD
Trigger: ATCCCTCCTGGTGATAACCCATTTTACAGGGATGAA...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGATGTTTGGTGTAGCTTaGACTACTGCAAGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKMFGVA*TTARSF
Trigger: AAAAGACCTTGCAGTAGTCCAAGCTACACCAAACAT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKWLAFS*SSFHLE
Trigger: CTCAAGATGAAAACTACTTCAACTAAAAGCCAACCA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCTTCTTTAATGACGTaGATTAGTCTACGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSSLMT*ISLRVC
Trigger: GCACACACGTAGACTAATTCACGTCATTAAAGAAGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGAGGCAGAAGAGCACTaGGATAAAGGAAAACATTTT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFEAEEH*DKGKHF
Trigger: AAAATGTTTTCCTTTATCTCAGTGCTCTTCTGCCTC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCAGTTGCCAGCTAAATaGATAAAAGCGAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIQLPAK*IKARFP
Trigger: AGGAAATCTCGCTTTTATTCATTTAGCTGGCAACTG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGATTAACACACTCTTCTaGTTCTTGTTCAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKINTLF*FLFKWL
Trigger: CAACCACTTGAACAAGAACCAGAAGAGTGTGTTAAT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGAAAGAACATACTTGTaGGCACTTCAGATGTTCACT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKERTYL*ALQMFT
Trigger: AGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGATATGTGTTAATGTTTaGTGTAGCTTGGACTACTGC +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKICVNV*CSLDYC
Trigger: GCAGTAGTCCAAGCTACACCAAACATTAACACATAT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCCCTACTCTCTTTGCTaGTTTCATTTACATACTGCT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFPYSLC*FHLHTA
Trigger: AGCAGTATGTAAATGAAACCAGCAAAGAGAGTAGGG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
3UTR CAA 72 bp TCTCTGAAAAAGAAATCAGCAGTGGAAAGAACATACTaGTGGGCACTTCAGATGTTCACTAAAAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: SLKKKSAVERTY*WALQMFTKSLK
Trigger: TTTAAGGCTTTTAGTGAACATCTGAAGTGCCCACAAGTATGTTCTTTCCACTGCTGATTTCTTTTTCAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR TCA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: NISFNCRYKEICAVICIFWLAFS*SSFHLE
Trigger: CTCAAGATGAAAACTACTTCAACTAAAAGCCAACCA...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR TCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCCAATTCCTGAAATTTaGGGTTTCTTAGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIPIPEI*GFLASY
Trigger: ATATGAGGCTAAGAAACCTCAAATTTCAGGAATTGG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR TCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAAGAACTTTATGGAGTaGTGGGCTGATAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKKNFME*WADNGN
Trigger: ATTTCCATTATCAGCCCATCACTCCATAAAGTTCTT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCTGCTGGTACATACATaGATTAAAGCATTTTTCATG +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKLLVHT*IKAFFM
Trigger: CATGAAAAATGCTTTAATGCATGTATGTACCAGCAG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAATGCAAGTAACCACTaGTGGTACATACATGCATTA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHINASNH*WYIHAL
Trigger: TAATGCATGTATGTACCAGCAGTGGTTACTTGCATT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGATTTTTCTGCTCCAGTaGTCAAACAGCCTTTATTTA +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKIFLLQ*SNSLYL
Trigger: TAAATAAAGGCTGTTTGAGCACTGGAGCAGAAAAAT...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCTTGTTCAAGTGGTTaGCTTTTAGTTGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSCSSG*LLVEVV
Trigger: AACTACTTCAACTAAAAGCCAACCACTTGAACAAGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR GCA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAAACCCTACTCTCTTTaGTGGTTTCATTTACATACT +
Preference number: 4 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFKPYSL*WFHLHT
Trigger: AGTATGTAAATGAAACCAGCAAAGAGAGTAGGGTTT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAAATCCCTCACACATTaGCACAACCAATTATTACAA +
Preference number: 4 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIKSLTH*HNQLLQ
Trigger: TTGTAATAATTGGTTGTGCCAATGTGTGAGGGATTT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CCA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATTAGACTATTATGACTaGGCATATATTATGCCAGAC +
Preference number: 4 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKLDYYD*AYIMPD
Trigger: GTCTGGCATAATATATGCCCAGTCATAATAGTCTAA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS GCA 90 bp AAGGTGGGGGCAGGAGCAATCGGACTGGAGGAGCCAGAGAGGGAGTaGGCGCCAGCCTGGGGCCCTGGCGCAGCGTGCGCGCGCGACGCG +
Preference number: 5 (lower is better)
Translates to: KVGAGAIGLEEPERE*APAWGPGAACARDA
Trigger: CGCGTCGCGCGCGCACGCTGCGCCAGGGCCCCAGGCTGGCGCGCACTCCCTCTCTGGCTCCTCCAGTCCGATTGCTCCTGCCCCCACCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp AGGGCGATGACGGTGCCGGGAGGGGCGGCCTCGCTCAGCGCCCCCTaGCGCACGGAGACGAAACCGATGGACGGCGCATTGTCGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RAMTVPGGAASLSAP*RTETKPMDGALSLR
Trigger: CCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAGCGAGGCCGCCCCTCCCGGCACCGTCATCGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp CGCCGCGCTCTGCAGGCGGAAGCCCAGGCTGCAGTCGAGCATCCCTaGCGATGTTCCCGATCACCGTGCCGGCCCCTTGCTCCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: RRALQAEAQAAVEHP*RCSRSPCRPLAPPA
Trigger: TGCCGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACATCGGCAGGGATGCTCGACTGCAGCCTGGGCTTCCGCCTGCAGAGCGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp GAGCAGGTAGGTGCGGAGCCCATTCTCGCCGGCGTCGGGGTCATGTaGGCTGGTGAGGGGGAAGCGGGTGCCCGGAGCAGCGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: EQVGAEPILAGVGVM*AGEGEAGARSSVLR
Trigger: TCGGAGAACGCTGCTCCGGGCACCCGCTTCCCCCTCACCAGCGCACATGACCCCGACGCCGGCGAGAATGGGCTCCGCACCTACCTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp GGTGTAGAGGAGCCCGCTGTCTGCGTCCACGTCCAGCAGGTGCGGTaGGGAGTTCTCCAGCACCCGGTAGCTACCCGACTTGCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: GVEEPAVCVHVQQVR*GVLQHPVATRLAAP
Trigger: GGGCGCAGCAAGTCGGGTAGCTACCGGGTGCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTCTACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp GGACTCGCGGTCGATGCGCTGCTTGGTGTAGAGGAGCCCGCTGTCTaGGTCCACGTCCAGCAGGTGCGGTGCGGAGTTCTCCAGCACCCG +
Preference number: 5 (lower is better)
Translates to: GLAVDALLGVEEPAV*VHVQQVRCGVLQHP
Trigger: CGGGTGCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACCGCGAGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp TGTCTAGGGCGCGCACAGTGCTCACCAGATAGCCCAGGCCAGCGTTaGGCGGCACCTGCAGCTCCGCGGTGTCGTTCTGCAGCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: CLGRAQCSPDSPGQR*AAPAAPRCRSAAWG
Trigger: TCCCCACGCTGCAGAACGACACCGCGGAGCTGCAGGTGCCGCGCAACGCTGGCCTGGGCTATCTGGTGAGCACTGTGCGCGCCCTAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp CCAGCTCCACCACGGGCGTCACGTCCTCCCAGAAAGGGTGCAGCGTaGGGATCTCGCCGCTGGACGGGTCGATCTCAAACAGGTGGTCGT +
Preference number: 5 (lower is better)
Translates to: PAPPRASRPPRKGAA*GSRRWTGRSQTGGR
Trigger: ACGACCACCTGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGCCCGTGGTGGAGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 90 bp ACTTGGCATTGTGGCGGCACAGGGACTCGCGGTCGATGCGCTGCTTaGTGTAGAGGAGCCCGCTGTCTGCGTCCACGTCCAGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: TWHCGGTGTRGRCAA*CRGARCLRPRPAGA
Trigger: CGCACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp GAGCGGATGATGAGCTTGGCCACTGCGGACAGGGTAGGCTTGCCGTaGTCGGTCACCTTCACCACCAGCTCCACCACGGGCGTCACGTCC +
Preference number: 5 (lower is better)
Translates to: ERMMSLATADRVGLP*SVTFTTSSTTGVTS
Trigger: GGACGTGACGCCCGTGGTGGAGCTGGTGGTGAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 90 bp GAGCGGCAGCGACATGTCCCAGTGGTGCTGCTCGCCATTCACCCGTaGTACCCCCTCGGGAAGGGATCCGCTCACCGAGCGGATGATGAG +
Preference number: 5 (lower is better)
Translates to: ERQRHVPVVLLAIHP*YPLGKGSAHRADDE
Trigger: CTCATCATCCGCTCGGTGAGCGGATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 90 bp ACAGCTGGCACTTGGCATTGTGGCGGCACAGGGACTCGCGGTCGATaGGCTGCTTGGTGTAGAGGAGCCCGCTGTCTGCGTCCACGTCCA +
Preference number: 5 (lower is better)
Translates to: TAGTWHCGGTGTRGR*AAWCRGARCLRPRP
Trigger: TGGACGTGGACGCAGACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp TTCACCACCAGCTCCACCACGGGCGTCACGTCCTCCCAGAAAGGGTaGAGCGTGCGGATCTCGCCGCTGGACGGGTCGATCTCAAACAGG +
Preference number: 5 (lower is better)
Translates to: FTTSSTTGVTSSQKG*SVRISPLDGSISNR
Trigger: CCTGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGCCCGTGGTGGAGCTGGTGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 90 bp GTGCTCAGAGTCACGATGAGCGGCAGCGACATGTCCCAGTGGTGCTaGTCGCCATTCACCCGTGGTACCCCCTCGGGAAGGGATCCGCTC +
Preference number: 5 (lower is better)
Translates to: VLRVTMSGSDMSQWC*SPFTRGTPSGRDPL
Trigger: GAGCGGATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 90 bp GCGTCACGTCCTCCCAGAAAGGGTGCAGCGTGCGGATCTCGCCGCTaGACGGGTCGATCTCAAACAGGTGGTCGTCGTTGCCGTCCACGA +
Preference number: 5 (lower is better)
Translates to: ASRPPRKGAACGSRR*TGRSQTGGRRCRPR
Trigger: TCGTGGACGGCAACGACGACCACCTGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS TCA 90 bp CGATCTCAAACAGGTGGTCGTCGTTGCCGTCCACGATCTCGTAGGTaGGACGCCCGCTCTCGCCGAAGTCGCTGTCTAGGGCGCGCACAG +
Preference number: 5 (lower is better)
Translates to: RSQTGGRRCRPRSRR*DARSRRSRCLGRAQ
Trigger: CTGTGCGCGCCCTAGACAGCGACTTCGGCGAGAGCGGGCGTCTCACCTACGAGATCGTGGACGGCAACGACGACCACCTGTTTGAGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTCACCGTGCCGGCCCCTaGCTCCTCCGGCACGGAGTA +
Preference number: 5 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPHRAGP*LLRHGV
Trigger: TACTCCGTGCCGGAGGAGCAAGGGGCCGGCACGGTG...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS GCA 90 bp ATAGTGCTCAGAGTCACGATGAGCGGCAGCGACATGTCCCAGTGGTaGTGCTCGCCATTCACCCGTGGTACCCCCTCGGGAAGGGATCCG +
Preference number: 5 (lower is better)
Translates to: IVLRVTMSGSDMSQW*CSPFTRGTPSGRDP
Trigger: CGGATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCACTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 90 bp TCTTGCCCTTGCCCCCACCCAGCTGCGGGTGGCTGTACTCGGCGATaGGGCAGTTGTAAGTGCGGATCTCCTTGTTCTCGCGCTTGCACT +
Preference number: 5 (lower is better)
Translates to: SCPCPHPAAGGCTRR*GSCKCGSPCSRACT
Trigger: AGTGCAAGCGCGAGAACAAGGAGATCCGCACTTACAACTGCCGCATCGCCGAGTACAGCCACCCGCAGCTGGGTGGGGGCAAGGGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 90 bp AGATCTCCTTGTCGTTGGCGAACACCTCGAGGGACAGCTGGCACTTaGCATTGTGGCGGCACAGGGACTCGCGGTCGATGCGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RSPCRWRTPRGTAGT*HCGGTGTRGRCAAW
Trigger: CCAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 90 bp CGTGGAGGCTCGCCACCGTCCAGGGCAGTCAGCACGAGCGTATGGTaGTTCTGTTGCTCGCGGTCCAGAGCCTTCTGGATGACCAGTTCT +
Preference number: 5 (lower is better)
Translates to: RGGSPPSRAVSTSVW*FCCSRSRAFWMTSS
Trigger: AGAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCACCATACGCTCGTGCTGACTGCCCTGGACGGTGGCGAGCCTCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp ATCATGCAGATCTCCTTGTCGTTGGCGAACACCTCGAGGGACAGCTaGCACTTGGCATTGTGGCGGCACAGGGACTCGCGGTCGATGCGC +
Preference number: 5 (lower is better)
Translates to: IMQISLSLANTSRDS*HLALWRHRDSRSMR
Trigger: GCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp GAGATAGTGCTCAGAGTCACGATGAGCGGCAGCGACATGTCCCAGTaGTGCTGCTCGCCATTCACCCGTGGTACCCCCTCGGGAAGGGAT +
Preference number: 5 (lower is better)
Translates to: EIVLRVTMSGSDMSQ*CCSPFTRGTPSGRD
Trigger: ATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGACTCTGAGCACTATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS TCA 90 bp GGTCGATGGAGAAGAGCTCCCGCACGCGGTCAGGCACGTAGCTGCTaGAAGAGTAGAGCACTTCACCATTGGGACCTTCATCGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: GRWRRAPARGQARSC*KSRALHHWDLHRRR
Trigger: CCGACGCCGATGAAGGTCCCAATGGTGAAGTGCTCTACTCTTTCAGCAGCTACGTGCCTGACCGCGTGCGGGAGCTCTTCTCCATCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 90 bp TTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCAGCCCGCGTGCCCCTaGGGGACAGTCAGGTTGTTGGAGGCCGGTTTGAGATACATCACC +
Preference number: 5 (lower is better)
Translates to: LVPCPVKLVWQPACP*GTVRLLEAGLRYIT
Trigger: GGTGATGTATCTCAAACCGGCCTCCAACAACCTGACTGTCCCTCAGGGGCACGCGGGCTGCCACACCAGCTTCACCGGACAAGGGACTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 90 bp GTTGGAGTCAATCACCTTCACGTTGATCTGTACGGTGGCGGAACGTaGAGGCTCGCCACCGTCCAGGGCAGTCAGCACGAGCGTATGGTG +
Preference number: 5 (lower is better)
Translates to: VGVNHLHVDLYGGGT*RLATVQGSQHERMV
Trigger: CACCATACGCTCGTGCTGACTGCCCTGGACGGTGGCGAGCCTCCACGTTCCGCCACCGTACAGATCAACGTGAAGGTGATTGACTCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPTLTVA*LSKCAG
Trigger: GCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGGT...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGCGGACAGGGTAGGCTaGCCGTGGTCGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHADRVG*PWSVTF
Trigger: GAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS TCA 90 bp CCAGGGGTTTCGTCTCTCCCGCCCGGACTTCGGGAGGCTCAAACTTaGGCGATGAGGCAGGCGATAAGAAGGAAATCTCGTCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PGVSSLPPGLREAQT*AMRQAIRRKSRLGE
Trigger: CTCTCCCAGACGAGATTTCCTTCTTATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGAAGTCCGGGCGGGAGAGACGAAACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 90 bp TGCTCAAGTTCCCTGAACCTGTTGATCTACAGCATCCGCACTGGGTaGGAAGCTGCGGTGCAGCAGAGCTGCAGGGGCTTGGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: CSSSLNLLIYSIRTG*EAAVQQSCRGLEQG
Trigger: GCCTTGCTCCAAGCCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACTTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 90 bp TCCCTCTGCACCCGAGCTGCGGCACCCGGTGGTCTCTCCTTATTCTaGTCAAGTTCCCTGAACCTGTTGATCTACAGCATCCGCACTGGG +
Preference number: 5 (lower is better)
Translates to: SLCTRAAAPGGLSLF*SSSLNLLIYSIRTG
Trigger: CCCAGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACTTGAGCAGAATAAGGAGAGACCACCGGGTGCCGCAGCTCGGGTGCAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp TTTCCTCATAGTCCAGATTGCCCTTCACACGGATTAGGCCGGTCTTaGGGTCGATGGAGAAGAGCTCCCGCACGCGGTCAGGCACGTAGC +
Preference number: 5 (lower is better)
Translates to: FPHSPDCPSHGLGRS*GRWRRAPARGQARS
Trigger: GCTACGTGCCTGACCGCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACCGGCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATAACGACTTGGTGGAGTaGAGGGGAGGAGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHNDLVE*RGGEPP
Trigger: CGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTT...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCGGCTCGATGCACGCCTaGGTTGGGCTGCTTGATGCT +
Preference number: 5 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSGSMHA*VGLLDA
Trigger: AGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCC...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS CCA 90 bp GTGATTCTGTTGCTCGCGGTCCAGAGCCTTCTGGATGACCAGTTCTaGGAACTTGGTGCCGTCGCCGCGGGACTTAACGTCCAGTCCAAA +
Preference number: 5 (lower is better)
Translates to: VILLLAVQSLLDDQF*ELGAVAAGLNVQSK
Trigger: TTTGGACTGGACGTTAAGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCCCTTGGTTGGGCTGCTaGATGCTGAGGGGACCTCTT +
Preference number: 5 (lower is better)
Translates to: SCSRTAPISLESRLALECPWLGC*MLRGPL
Trigger: AAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGG...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCGATGCACGCCTTGGTaGGGCTGCTTGATGCTGAGG +
Preference number: 5 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMRCTPW*GCLMLR
Trigger: CCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCG...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS GCA 90 bp ATTGTCTGTCTGAATTATGGACATCCGAGTGGCAGGGGTCTCGCTTaGATTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCAGCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: IVCLNYGHPSGRGLA*ISPLSGEAGVAARV
Trigger: CACGCGGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAATTCAGACAGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS CCA 90 bp AAATCTACTCCCGCCCGGAGACTCCGGAATACTCTTCACATCGAGTaGGGGAGGGAGCAGGGAGGTGTGTCTCTAGGCAGATCCGAAAGT +
Preference number: 5 (lower is better)
Translates to: KSTPARRLRNTLHIE*GREQGGVSLGRSES
Trigger: ACTTTCGGATCTGCCTAGAGACACACCTCCCTGCTCCCTCCCCCACTCGATGTGAAGAGTATTCCGGAGTCTCCGGGCGGGAGTAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp ATTCTGCTCAAGTTCCCTGAACCTGTTGATCTACAGCATCCGCACTaGGTGAGAAGCTGCGGTGCAGCAGAGCTGCAGGGGCTTGGAGCA +
Preference number: 5 (lower is better)
Translates to: ILLKFPEPVDLQHPH*VRSCGAAELQGLGA
Trigger: TGCTCCAAGCCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACTTGAGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp AAGAAAGCAGCAACAGATGGAAAGGTACATCCCAGACCTGTAAGGTaGGGGCAGGAGCAATCGGACTGGAGGAGCCAGAGAGGGAGTGCG +
Preference number: 5 (lower is better)
Translates to: KKAATDGKVHPRPVR*GQEQSDWRSQRGSA
Trigger: CGCACTCCCTCTCTGGCTCCTCCAGTCCGATTGCTCCTGCCCCCACCTTACAGGTCTGGGATGTACCTTTCCATCTGTTGCTGCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTACCAGTTCTGGGAACTaGGTGCCGTCGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITTSSGN*VPSPRD
Trigger: GTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGT...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTGCCACGATGGTCACGTaGTACTCGTCTTGTGTCTCG +
Preference number: 5 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPATMVT*YSSCVS
Trigger: CGAGACACAAGACGAGTACAACGTGACCATCGTGGC...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCGTGAACCGAGGCGGGTaGTCGTTCTCGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSVNRGG*SFSSRI
Trigger: GATTCTAGACGAGAACGACAACCCGCCTCGGTTCAC...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCGCTTGCATTAGTCCCTaGTCCGGTGAAGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSACISP*SGEAGV
Trigger: CACACCAGCTTCACCGGACAAGGGACTAATGCAAGC...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCCTGCCCAGATCCCTGTaGGGGTGGTCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPLPRSL*GWSSCS
Trigger: TGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAG...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS CCA 90 bp TTCAGGCAGTGTTTTGCTGCATTTAGAGATCTAATCTTGCATTGCTaGCTGAGGCAGCGGCGGCGGCGGACTGCATCTACCAGCCAAGCG +
Preference number: 5 (lower is better)
Translates to: FRQCFAAFRDLILHC*LRQRRRRTASTSQA
Trigger: CGCTTGGCTGGTAGATGCAGTCCGCCGCCGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATCTCTAAATGCAGCAAAACACTGCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AAGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCGTATGGTGATTCTGTaGCTCGCGGTCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: KLLKNSTHLTGIPAGSGMRMVIL*LAVQSL
Trigger: AAGGCTCTGGACCGCGAGCAACAGAATCACCATACG...CATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCACACGTTGTACTCGTCTaGTGTCTCGCGGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSHVVLV*CLAVQR
Trigger: CCGCTGGACCGCGAGACACAAGACGAGTACAACGTG...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATTTCTCGCGCTTGCACTaGACGGCGATGGTGATCATG +
Preference number: 5 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHFSRLH*TAMVIM
Trigger: CATGATCACCATCGCCGTCAAGTGCAAGCGCGAGAA...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGTCCTTGTTCTCGCGCTaGCACTTGACGGCGATGGTG +
Preference number: 5 (lower is better)
Translates to: GFASQPSREPFVEVQGSMSLFSR*HLTAMV
Trigger: CACCATCGCCGTCAAGTGCAAGCGCGAGAACAAGGA...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTTTGTTGGAGGCCGGTTaGAGATACATCACCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPLLEAG*RYITSD
Trigger: GTCGGAGGTGATGTATCTCAAACCGGCCTCCAACAA...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS TCA 90 bp GTGGGGGAGGGAGCAGGGAGGTGTGTCTCTAGGCAGATCCGAAAGTaGAATTCTTACTTGCTGCTCGCCTCCCGTGATGAAATTGATGGG +
Preference number: 5 (lower is better)
Translates to: VGEGAGRCVSRQIRK*NSYLLLASRDEIDG
Trigger: CCCATCAATTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCTAGAGACACACCTCCCTGCTCCCTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 90 bp ATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTaGTCACTGTCCCCGTGCCCACTGTCTCTCAGGCTGGCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: MSQQEPLLVSWSLSA*SLSPCPLSLRLALS
Trigger: AGAAAGAGCCAGCCTGAGAGACAGTGGGCACGGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS GCA 90 bp CCTGCACGTCAATCTCCAGCATCCCGTTTTCCTCATAGTCCAGATTaGCCTTCACACGGATTAGGCCGGTCTTGGGGTCGATGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: PARQSPASRFPHSPD*PSHGLGRSWGRWRR
Trigger: TCTTCTCCATCGACCCCAAGACCGGCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGGAAAACGGGATGCTGGAGATTGACGTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGCGGATTAGGCCGGTCTaGGGGTCGATGGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWRIRPV*GSMEKS
Trigger: GCTCTTCTCCATCGACCCCAAGACCGGCCTAATCCG...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAGACGGCGCATTGTCGTaGCGGTCGATGAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLDGALS*RSMSLT
Trigger: GGTCAAGCTCATCGACCGCAACGACAATGCGCCGTC...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATGCAGCTGTCCGTTCTaGCCAGAGTCCCGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLCSCPF*PESRSV
Trigger: CACTGACCGGGACTCTGGCAAGAACGGACAGCTGCA...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTGTCCCCTTGATCGCGAACGACTaGGTGGAGTTGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: TAGAFVSVLVTVSLITVPLIAND*VELRGG
Trigger: TCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAA...GGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGTTGATCTTCTTCTTCTaGCCCTTGCCCCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: GFASQPSREPFVEVQGSMLIFFF*PLPPPS
Trigger: GCTGGGTGGGGGCAAGGGCAAGAAGAAGAAGATCAA...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTCCAGGGCTCCTGGTTTaGCTTCACAGCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITPGLLV*LHSHPG
Trigger: CCCTGGATGGCTGTGAAGCAAAACCAGGAGCCCTGG...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTAGGGACAGCTGGCACTaGGCATTGTGGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLRDSWH*ALWRHR
Trigger: CCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCT...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAACCGGGCTGTTGTCGTaGGAGTCAATCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSTGLLS*ESITFT
Trigger: CGTGAAGGTGATTGACTCCAACGACAACAGCCCGGT...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TTTCACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTAAGCTTGACCGTGACTTaGCAGTGGGCTGGGATAGGG +
Preference number: 5 (lower is better)
Translates to: FHFLTATGSFPRQSCKSLSLTVT*QWAGIG
Trigger: CCCTATCCCAGCCCACTGCAAAGTCACGGTCAAGCT...TAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCTCCTTAGCAAGCACCTaGAACTCAAAAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SCSRTAPISLESRLALECSLAST*NSKALV
Trigger: GACCAAGGCTTTTGAGTTCAAGGTGCTTGCTAAGGA...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCACATGCCTTTGTTAGTGTCTaGGTCACTGTCAGCCTGATC +
Preference number: 5 (lower is better)
Translates to: AQEQHPSHWNPGWLWNAHAFVSV*VTVSLI
Trigger: GATCAGGCTGACAGTGACCAAGACACTAACAAAGGC...ATGTGCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGCATCCAGGGAGCCTTTaGTTGAGGTGCAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: ASLTDMSQQEPLLVSWSLHPGSL*LRCKAR
Trigger: TCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATG...CAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCATCTGCAAAGACCCTaGCCATCTGATCGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GFASQPSREPFVEVQGSMHLQRP*PSDRKP
Trigger: TGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATG...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTCAGAGCTGCAGGGGCTaGGAGCAAGGCGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGQSCRG*EQGGGF
Trigger: GAAGCCACCGCCTTGCTCCAAGCCCCTGCAGCTCTG...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCAGCTGGCACTTGGCATaGTGGCGGCACAGGGACTCG +
Preference number: 5 (lower is better)
Translates to: RMTKHSAFICAINTLFWFSWHLA*WRHRDS
Trigger: CGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCT...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ATCCACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACTCCTGGATCTCTACCTaGATCATGCAGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: IHRLSAQIPVGVVKLLKNSWIST*IMQISL
Trigger: CAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGA...GTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TTGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTTGCGGTCGATGAGCTaGACCGTGACTTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LSASLTDMSQQEPLLVSWLRSMS*TVTLQW
Trigger: CCACTGCAAAGTCACGGTCAAGCTCATCGACCGCAA...CCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGCACGCCTGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGAC +
Preference number: 5 (lower is better)
Translates to: LHSHPGSLLLRCKARCTPEVVFI*SASLTD
Trigger: GTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTC...AGGCGTGCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CACAGACTCTCTGCCCAGATCCCTGTTGGGGTGGTCAAGCTGCTCAAGAACAGCAGCCTTAAAGCAGCATaGGTCTTTCTTCATCCCTGT +
Preference number: 5 (lower is better)
Translates to: HRLSAQIPVGVVKLLKNSSLKAA*VFLHPC
Trigger: ACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCT...GCTGTTCTTGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAGAGAGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACACCGTGCCGGCCCCTaGCTCCTCCGGCACGGAGTA +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKHRAGP*LLRHGV
Trigger: TACTCCGTGCCGGAGGAGCAAGGGGCCGGCACGGTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTATCATGCAGATCTCCTaGTCGTTGGCGAACACCTCG +
Preference number: 5 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITIMQIS*SLANTS
Trigger: CGAGGTGTTCGCCAACGACAAGGAGATCTGCATGAT...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS GCA 90 bp CAGGGAGGTGTGTCTCTAGGCAGATCCGAAAGTGAAATTCTTACTTaGTGCTCGCCTCCCGTGATGAAATTGATGGGGATGAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: QGGVSLGRSESEILT*CSPPVMKLMGMKSN
Trigger: GTTGCTCTTCATCCCCATCAATTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCTAGAGACACACCTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAATTTCTCTCACAACTTAGATCTAATCTTGCATaGCTGGCTGAGGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: QGRFPGSLAKAYQFLSQLRSNLA*LAEAAA
Trigger: CGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATCT...AAGTTGTGAGAGAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACAACGACTTGGTGGAGTaGAGGGGAGGAGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHNDLVE*RGGEPP
Trigger: CGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCGGGC +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFTLTVA*LSKCAG
Trigger: GCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGGT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGCGGACAGGGTAGGCTaGCCGTGGTCGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKADRVG*PWSVTF
Trigger: GAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTGAGCGGATGATGAGCTaGGCCACTGCGGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGERMMS*ATADRV
Trigger: TACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTC...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGCTGCTCAAGAACAGCACCCATCTCACTGGAATCCCGGCTGGCTCTGGAATGCATAGTGTGCTCTCGCTaGTCTTTTCCAAATGTACAA +
Preference number: 5 (lower is better)
Translates to: SCSRTAPISLESRLALECIVCSR*SFPNVQ
Trigger: TTGTACATTTGGAAAAGACAAGCGAGAGCACACTAT...GCATTCCAGAGCCAGCCGGGATTCCAGTGAGATGGGTGCTGTTCTTGAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TCGATGCACGCCTTGGTTGGGCTGCTTGATGCTGAGGGGACCTCTTGGAGGAGATGTCCTAATACAAGTTaGGTCAAAACGAAACCATTG +
Preference number: 5 (lower is better)
Translates to: SMHALVGLLDAEGTSWRRCPNTS*VKTKPL
Trigger: CAATGGTTTCGTTTTGACCAAACTTGTATTAGGACA...TCTCCTCCAAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS GCA 90 bp GGAGGTGTGTCTCTAGGCAGATCCGAAAGTGAAATTCTTACTTGCTaGTCGCCTCCCGTGATGAAATTGATGGGGATGAAGAGCAACGAA +
Preference number: 5 (lower is better)
Translates to: GGVSLGRSESEILTC*SPPVMKLMGMKSNE
Trigger: TTCGTTGCTCTTCATCCCCATCAATTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCTAGAGACACACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 90 bp ACGTGGAGCTACTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGGACATCCGAG +
Preference number: 5 (lower is better)
Translates to: TWSYFEQTAACCPCN*ALRENCLSELWTSE
Trigger: CTCGGATGTCCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000615375.1
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTCAGAGCTGCAGGGGCTaGGAGCAAGGCGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFQSCRG*EQGGGF
Trigger: GAAGCCACCGCCTTGCTCCAAGCCCCTGCAGCTCTG...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGCTGGCACTTGGCATaGTGGCGGCACAGGGACTCG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSWHLA*WRHRDS
Trigger: CGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTCAGATCTCCTTGTCGTaGGCGAACACCTCGAGGGAC +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGQISLS*ANTSRD
Trigger: GTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTG...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTACCAGTTCTGGGAACTaGGTGCCGTCGCCGCGGGAC +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFTSSGN*VPSPRD
Trigger: GTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGCCGATGGACGGCGCATaGTCGTTGCGGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKPMDGA*SLRSMS
Trigger: GCTCATCGACCGCAACGACAATGCGCCGTCCATCGG...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTTTCTCGTCTAGAATCTaGATCGCGAACGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITFSSRI*IANDLV
Trigger: CACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAA...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp GGTTTTGCTTCACAGCCATCCAGGGAGCCTTTTGTTGAGGTGCAAGGCTCGATGTTGAACTCAAAAGCCTaGGTCTGCTCGAAGTTAAAG +
Preference number: 5 (lower is better)
Translates to: GFASQPSREPFVEVQGSMLNSKA*VCSKLK
Trigger: CTTTAACTTCGAGCAGACCAAGGCTTTTGAGTTCAA...CATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATGGCTGTGAAGCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGGCTCGATGCACGCCTaGGTTGGGCTGCTTGATGCT +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHGSMHA*VGLLDA
Trigger: AGCATCAAGCAGCCCAACCAAGGCGTGCATCGAGCC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCTGCCCAGATCCCTGTaGGGGTGGTCAAGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHLPRSL*GWSSCS
Trigger: TGAGCAGCTTGACCACCCCAACAGGGATCTGGGCAG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CACTTTCTCACAGCCACAGGGTCGTTTCCCCGGCAGTCTTGCAAAAGCTTATCAGTTTCCCCGGCAGTCTaGCAAAAGCTTATCAATTTC +
Preference number: 5 (lower is better)
Translates to: HFLTATGSFPRQSCKSLSVSPAV*QKLINF
Trigger: GAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAAC...TGATAAGCTTTTGCAAGACTGCCGGGGAAACGACCCTGTGGCTGTGAGAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CATGTCACAGCAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTGATCACTTTTAGAGATCTAATCTaGCATTGCTGGCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: HVTAGAFVSVLVTVSLITFRDLI*HCWLRQ
Trigger: CTGCCTCAGCCAGCAATGCAAGATTAGATCTCTAAA...AGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGGGACAGCTGGCACTaGGCATTGTGGCGGCACAGG +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRDSWH*ALWRHR
Trigger: CCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AACATTAGCTTCAACTGTAGGTACAAAGAGATTTGTGCGGTAATCTGCATTTTCCCGATGGACGGCGCATaGTCGTTGCGGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: NISFNCRYKEICAVICIFPMDGA*SLRSMS
Trigger: GCTCATCGACCGCAACGACAATGCGCCGTCCATCGG...GAAAATGCAGATTACCGCACAAATCTCTTTGTACCTACAGTTGAAGCTAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTGCAGCTGTCCGTTCTaGCCAGAGTCCCGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKCSCPF*PESRSV
Trigger: CACTGACCGGGACTCTGGCAAGAACGGACAGCTGCA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGAGCGGATGATGAGCTaGGCCACTGCGGACAGGGTA +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKERMMS*ATADRV
Trigger: TACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTGGGACAGTCAGGTTGTaGGAGGCCGGTTTGAGATAC +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGGTVRL*EAGLRY
Trigger: GTATCTCAAACCGGCCTCCAACAACCTGACTGTCCC...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGTCGGGAGGCTCAAACTaGAGCGATGAGGCAGGCGAT +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKSGGSN*SDEAGD
Trigger: ATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGA...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CAAATGTACAAAAAGTCTTTTTCCCAGTGGGATTCACAGTTTCGTAAGTCTCAGTCGGGAGGCTCAAACTaGAGCGATGAGGCAGGCGAT +
Preference number: 5 (lower is better)
Translates to: QMYKKSFSQWDSQFRKSQSGGSN*SDEAGD
Trigger: ATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGA...CTGAGACTTACGAAACTGTGAATCCCACTGGGAAAAAGACTTTTTGTACATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGGAGGGCGCGTTGTCGTaGATGTCCTGGATCTCTACC +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKEGALS*MSWIST
Trigger: GGTAGAGATCCAGGACATCAACGACAACGCGCCCTC...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCGGATTAGGCCGGTCTaGGGGTCGATGGAGAAGAGC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRIRPV*GSMEKS
Trigger: GCTCTTCTCCATCGACCCCAAGACCGGCCTAATCCG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGCTTGACCGTGACTTaGCAGTGGGCTGGGATAGGG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSLTVT*QWAGIG
Trigger: CCCTATCCCAGCCCACTGCAAAGTCACGGTCAAGCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGACGGCGCATTGTCGTaGCGGTCGATGAGCTTGACC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIDGALS*RSMSLT
Trigger: GGTCAAGCTCATCGACCGCAACGACAATGCGCCGTC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACACGTTGTACTCGTCTaGTGTCTCGCGGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKHVVLV*CLAVQR
Trigger: CCGCTGGACCGCGAGACACAAGACGAGTACAACGTG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGTGAACCGAGGCGGGTaGTCGTTCTCGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHVNRGG*SFSSRI
Trigger: GATTCTAGACGAGAACGACAACCCGCCTCGGTTCAC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCTTGCATTAGTCCCTaGTCCGGTGAAGCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHACISP*SGEAGV
Trigger: CACACCAGCTTCACCGGACAAGGGACTAATGCAAGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCCTTGGTTGGGCTGCTaGATGCTGAGGGGACCTCTT +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKPWLGC*MLRGPL
Trigger: AAGAGGTCCCCTCAGCATCAAGCAGCCCAACCAAGG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCGATGCACGCCTTGGTaGGGCTGCTTGATGCTGAGG +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIRCTPW*GCLMLR
Trigger: CCTCAGCATCAAGCAGCCCAACCAAGGCGTGCATCG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCCAGGGAGCCTTTTGTaGAGGTGCAAGGCTCGATGC +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKPGSLL*RCKARC
Trigger: GCATCGAGCCTTGCACCTCAACAAAAGGCTCCCTGG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCATCCAGGGAGCCTTTaGTTGAGGTGCAAGGCTCGA +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHHPGSL*LRCKAR
Trigger: TCGAGCCTTGCACCTCAACAAAAGGCTCCCTGGATG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCCAGGGCTCCTGGTTTaGCTTCACAGCCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIPGLLV*LHSHPG
Trigger: CCCTGGATGGCTGTGAAGCAAAACCAGGAGCCCTGG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS CCA 90 bp CTACTGAAATACTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGGACATCCGAG +
Preference number: 5 (lower is better)
Translates to: LLKYFEQTAACCPCN*ALRENCLSELWTSE
Trigger: CTCGGATGTCCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTATTTCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGAGATCTAATCTTGCATaGCTGGCTGAGGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKRSNLA*LAEAAA
Trigger: CGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATCT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTAGTTCCCTGAACCTGTaGATCTACAGCATCCGCACT +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGSSLNL*IYSIRT
Trigger: AGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACT...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCAGATCTCCTTGTCGTaGGCGAACACCTCGAGGGAC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIQISLS*ANTSRD
Trigger: GTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATCATGCAGATCTCCTaGTCGTTGGCGAACACCTCG +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHIMQIS*SLANTS
Trigger: CGAGGTGTTCGCCAACGACAAGGAGATCTGCATGAT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAGAGGGCGCGTTGTCGTaGATGTCCTGGATCTCTACC +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKEGALS*MSWIST
Trigger: GGTAGAGATCCAGGACATCAACGACAACGCGCCCTC...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp AAACTCATAGAGTTCGACAGCTACCAAGGCAACACTTGCCATTTACAATATAAGCGTATGGTGATTCTGTaGCTCGCGGTCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: KLIEFDSYQGNTCHLQYKRMVIL*LAVQSL
Trigger: AAGGCTCTGGACCGCGAGCAACAGAATCACCATACG...CTTATATTGTAAATGGCAAGTGTTGCCTTGGTAGCTGTCGAACTCTATGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGACCGGGCTGTTGTCGTaGGAGTCAATCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKTGLLS*ESITFT
Trigger: CGTGAAGGTGATTGACTCCAACGACAACAGCCCGGT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCCTTGTTCTCGCGCTaGCACTTGACGGCGATGGTG +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSLFSR*HLTAMV
Trigger: CACCATCGCCGTCAAGTGCAAGCGCGAGAACAAGGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTTGATCTTCTTCTTCTaGCCCTTGCCCCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLIFFF*PLPPPS
Trigger: GCTGGGTGGGGGCAAGGGCAAGAAGAAGAAGATCAA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATTGCGGTCGATGAGCTaGACCGTGACTTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKLRSMS*TVTLQW
Trigger: CCACTGCAAAGTCACGGTCAAGCTCATCGACCGCAA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTGCCACGATGGTCACGTaGTACTCGTCTTGTGTCTCG +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFATMVT*YSSCVS
Trigger: CGAGACACAAGACGAGTACAACGTGACCATCGTGGC...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTGATCGCGAACGACTaGGTGGAGTTGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHILIAND*VELRGG
Trigger: TCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGACGATCACTGGCGCGTaGTCATTCACGTCTAGCACT +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKTITGA*SFTSST
Trigger: AGTGCTAGACGTGAATGACAACGCGCCAGTGATCGT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTCTCGCGCTTGCACTaGACGGCGATGGTGATCATG +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFFSRLH*TAMVIM
Trigger: CATGATCACCATCGCCGTCAAGTGCAAGCGCGAGAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTTGTTGGAGGCCGGTTaGAGATACATCACCTCCGAC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLLEAG*RYITSD
Trigger: GTCGGAGGTGATGTATCTCAAACCGGCCTCCAACAA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGGGACAGTCAGGTTGTaGGAGGCCGGTTTGAGATAC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIGTVRL*EAGLRY
Trigger: GTATCTCAAACCGGCCTCCAACAACCTGACTGTCCC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGCCTTTGTTAGTGTCTaGGTCACTGTCAGCCTGATC +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHAFVSV*VTVSLI
Trigger: GATCAGGCTGACAGTGACCAAGACACTAACAAAGGC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS TCA 90 bp GGAAAGCAAAGTCGGGAATGCTTGTTCAAGTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACAGACATGTCACA +
Preference number: 5 (lower is better)
Translates to: GKQSRECLFKWLAFS*SSFHLECLPNRHVT
Trigger: TGTGACATGTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGCATTCCCGACTTTGCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615375.1
CDS GCA 90 bp TTAAACGTGGAGCTACTGAAATACTTTGAACAAACTGCTGCCTGCTaGCCATGTAATTGGGCTCTGCGGGAAAATTGTCTGTCTGAATTA +
Preference number: 5 (lower is better)
Translates to: LNVELLKYFEQTAAC*PCNWALRENCLSEL
Trigger: TAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTATTTCAGTAGCTCCACGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAACGATCACTGGCGCGTaGTCATTCACGTCTAGCACT +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKTITGA*SFTSST
Trigger: AGTGCTAGACGTGAATGACAACGCGCCAGTGATCGT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp AGAATGACCAAGCACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCACACTCTTCTGGTTCTaGTTCAAGTGGTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: RMTKHSAFICAINTLFWFTLFWF*FKWLAF
Trigger: AAAAGCCAACCACTTGAACAAGAACCAGAAGAGTGT...GAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGTGCTTGGTCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAACATCTGCAAAGACCCTaGCCATCTGATCGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKHLQRP*PSDRKP
Trigger: TGGCTTCCGATCAGATGGCAAGGGTCTTTGCAGATG...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ACTCGGCATTCATCTGTGCAATTAACACACTCTTCTGGTTCTTGTTCAAGTGGTGTGGAAAGAACATACTaGTGGGCACTTCAGATGTTC +
Preference number: 5 (lower is better)
Translates to: TRHSSVQLTHSSGSCSSGVERTY*WALQMF
Trigger: GAACATCTGAAGTGCCCACAAGTATGTTCTTTCCAC...ACCACTTGAACAAGAACCAGAAGAGTGTGTTAATTGCACAGATGAATGCCGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGTTTCTACACTGGCTaGGTGGCCAGAAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHICFYTG*VARREG
Trigger: GCCTTCTCTTCTGGCCACCAAGCCAGTGTAGAAACA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAAGTTCCCTGAACCTGTaGATCTACAGCATCCGCACT +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSSLNL*IYSIRT
Trigger: AGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCCTGGATCTCTACCTaGATCATGCAGATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSWIST*IMQISL
Trigger: CAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTCAATCACCTTCACGTaGATCTGTACGGTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFSITFT*ICTVAE
Trigger: TTCCGCCACCGTACAGATCAACGTGAAGGTGATTGA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCAATCACCTTCACGTaGATCTGTACGGTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSITFT*ICTVAE
Trigger: TTCCGCCACCGTACAGATCAACGTGAAGGTGATTGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCCTCTCAAAGCAGTTTaGCAAACGAGGTACAGTCTA +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHPLKAV*QTRYSL
Trigger: TAGACTGTACCTCGTTTGCAAAACTGCTTTGAGAGG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGTCACAGATATATTTaGAAGCTTCCCCAGCGCACC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHISHRYI*KLPQRT
Trigger: GGTGCGCTGGGGAAGCTTCAAAATATATCTGTGACT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTCTCGTCTAGAATCTaGATCGCGAACGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFFSSRI*IANDLV
Trigger: CACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATCCTTAGCAAGCACCTaGAACTCAAAAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKSLAST*NSKALV
Trigger: GACCAAGGCTTTTGAGTTCAAGGTGCTTGCTAAGGA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAAACGTGGAGCTACTTaGAACAAACTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFKRGAT*NKLLPA
Trigger: AGCAGGCAGCAGTTTGTTCAAAGTAGCTCCACGTTT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGAC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKEVVFI*SASLTD
Trigger: GTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGTGGAAAGAACATACTaGTGGGCACTTCAGATGTTC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKVERTY*WALQMF
Trigger: GAACATCTGAAGTGCCCACAAGTATGTTCTTTCCAC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACCTTTTGTTGTTGTCCTaGTTCACCAATCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHLLLLS*FTNHLV
Trigger: CACCAAGTGATTGGTGAACAAGGACAACAACAAAAG...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTTTTAGAGATCTAATCTaGCATTGCTGGCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFFRDLI*HCWLRQ
Trigger: CTGCCTCAGCCAGCAATGCAAGATTAGATCTCTAAA...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTTGAACTCAAAAGCCTaGGTCTGCTCGAAGTTAAAG +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLNSKA*VCSKLK
Trigger: CTTTAACTTCGAGCAGACCAAGGCTTTTGAGTTCAA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGACACTCTTCTGGTTCTaGTTCAAGTGGTTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKTLFWF*FKWLAF
Trigger: AAAAGCCAACCACTTGAACAAGAACCAGAAGAGTGT...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTGTTTCCCCGGCAGTCTaGCAAAAGCTTATCAATTTC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIVSPAV*QKLINF
Trigger: GAAATTGATAAGCTTTTGCAAGACTGCCGGGGAAAC...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGGGAATAGAAGGTGTATaGTTCTCAAAGGACACCAAC +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKGIEGV*FSKDTN
Trigger: GTTGGTGTCCTTTGAGAACAATACACCTTCTATTCC...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTACCAAGAGTAGAGCTTaGGAAAGGCTGTTACTAGGA +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHITKSRA*ERLLLG
Trigger: TCCTAGTAACAGCCTTTCCAAAGCTCTACTCTTGGT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTCTAAAGGTGTGATTTaGGCATCTCATAGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKSKGVI*ASHRLP
Trigger: AGGAAGCCTATGAGATGCCAAAATCACACCTTTAGA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACAGACCTGTCTATCTGTaGACCTCAGTAACTTTTACT +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHRPVYL*TSVTFT
Trigger: AGTAAAAGTTACTGAGGTCAACAGATAGACAGGTCT...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTAATGTTTGGTGTAGCTaGGACTACTGCAAGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFNVWCS*DYCKVF
Trigger: AAAGACCTTGCAGTAGTCCAAGCTACACCAAACATT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CTGATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACGTACAGTCTAAAATATaGATGGCATTTGGCGGAAAT +
Preference number: 5 (lower is better)
Translates to: LMDVIFDLSVSSISSLKHVQSKI*MAFGGN
Trigger: ATTTCCGCCAAATGCCATCAATATTTTAGACTGTAC...GTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp CATCCCTGTAAAATGGGTTATCACCAGGAGGGATCATTTTTAAATCAACAGAAGTTGTTCACCAATCACTaGGTGCAGCTAAGAACTTTA +
Preference number: 5 (lower is better)
Translates to: HPCKMGYHQEGSFLNQQKLFTNH*VQLRTL
Trigger: TAAAGTTCTTAGCTGCACCAAGTGATTGGTGAACAA...CTTCTGTTGATTTAAAAATGATCCCTCCTGGTGATAACCCATTTTACAGGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp TCAATCAAGGCATTTTCCCATCTGCTGCTACTTCTGCAAGTGCTAATTTTATTTATGCTGCTTTTGTTGTaGTCCTTGTTCACCAATCAC +
Preference number: 5 (lower is better)
Translates to: SIKAFSHLLLLLQVLILFMLLLL*SLFTNH
Trigger: GTGATTGGTGAACAAGGACAACAACAAAAGCAGCAT...AAATAAAATTAGCACTTGCAGAAGTAGCAGCAGATGGGAAAATGCCTTGATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAAATAGTGTGCTCTCGCTaGTCTTTTCCAAATGTACAA +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKIVCSR*SFPNVQ
Trigger: TTGTACATTTGGAAAAGACAAGCGAGAGCACACTAT...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTGTATGCTGCTTTTGTaGTTGTCCTTGTTCACCAAT +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHICMLLL*LSLFTN
Trigger: ATTGGTGAACAAGGACAACAACAAAAGCAGCATACA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp AGATGTTCACTAAAAGCCTTAAAGCAGCATTGGTCTTTCTTCATCCCTGTAAAATGTCCTAATACAAGTTaGGTCAAAACGAAACCATTG +
Preference number: 5 (lower is better)
Translates to: RCSLKALKQHWSFFIPVKCPNTS*VKTKPL
Trigger: CAATGGTTTCGTTTTGACCAAACTTGTATTAGGACA...TTTTACAGGGATGAAGAAAGACCAATGCTGCTTTAAGGCTTTTAGTGAACATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAAATGGTCATGTGACTaGCGTATGTCTAAGACATTT +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIKWSCD*RMSKTF
Trigger: AAATGTCTTAGACATACGCAAGTCACATGACCATTT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTCATATGGAAGTAAGTTaGAAACTCGCTAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIHMEVS*KLAKCH
Trigger: GTGACATTTAGCGAGTTTCAAACTTACTTCCATATG...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTAGAGAGAAGCAACACTaGGTAAGACTAAATGGAAAT +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIREKQH*VRLNGN
Trigger: ATTTCCATTTAGTCTTACCAAGTGTTGCTTCTCTCT...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS-3UTR CAA 90 bp ATGGATGTAATTTTTGACCTTTCAGTTAGCTCCATCAGCTCACTCAAACACATTTTCAAATCTCACTGTTaGCTCATGCATCACCTATTA +
Preference number: 5 (lower is better)
Translates to: MDVIFDLSVSSISSLKHIFKSHC*LMHHLL
Trigger: TAATAGGTGATGCATGAGCAAACAGTGAGATTTGAA...AATGTGTTTGAGTGAGCTGATGGAGCTAACTGAAAGGTCAAAAATTACATCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377918.8
CDS GCA 72 bp AGGGAGTGCGCGCCAGCCTGGGGCCCTGGCGCAGCGTaGGCGCGCGACGCGAGCCACAAGTCTATGGGTCCT +
Preference number: 6 (lower is better)
Translates to: RECAPAWGPGAA*ARDASHKSMGP
Trigger: AGGACCCATAGACTTGTGGCTCGCGTCGCGCGCGCACGCTGCGCCAGGGCCCCAGGCTGGCGCGCACTCCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GGTGCGGAGCCCATTCTCGCCGGCGTCGGGGTCATGTaGGCTGGTGAGGGGGAAGCGGGTGCCCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GAEPILAGVGVM*AGEGEAGARSS
Trigger: GCTGCTCCGGGCACCCGCTTCCCCCTCACCAGCGCACATGACCCCGACGCCGGCGAGAATGGGCTCCGCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CGGAGTTCTCCAGCACCCGGTAGCTACCCGACTTGCTaGGCCCTCCGCCGCCGCGCTCTGCAGGCGGAAGCC +
Preference number: 6 (lower is better)
Translates to: RSSPAPGSYPTC*ALRRRALQAEA
Trigger: GGCTTCCGCCTGCAGAGCGCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCTACCGGGTGCTGGAGAACTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GTGCGGAGTTCTCCAGCACCCGGTAGCTACCCGACTTaGTGCGCCCTCCGCCGCCGCGCTCTGCAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: VRSSPAPGSYPT*CALRRRALQAE
Trigger: TTCCGCCTGCAGAGCGCGGCGGCGGAGGGCGCAGCAAGTCGGGTAGCTACCGGGTGCTGGAGAACTCCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp GCTTGGAGCAAGGCGGTGGCTTCCTGCGGCTGGGGGTaGGCCAGGGGTTTCGTCTCTCCCGCCCGGACTTCG +
Preference number: 6 (lower is better)
Translates to: AWSKAVASCGWG*ARGFVSPARTS
Trigger: CGAAGTCCGGGCGGGAGAGACGAAACCCCTGGCTCACCCCCAGCCGCAGGAAGCCACCGCCTTGCTCCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CCGCCGCCCGTCCCTCCTCCGCCTAGGACCCGACACTaGAGCTGTCCGTTCTTGCCAGAGTCCCGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PPPVPPPPRTRH*SCPFLPESRSV
Trigger: CACTGACCGGGACTCTGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGGCGGAGGAGGGACGGGCGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp GGAGGAGAGCCCCCGTCCCGCGCCACGATGGTCACGTaGTACTCGTCTTGTGTCTCGCGGTCCAGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: GGEPPSRATMVT*YSSCVSRSSGR
Trigger: CCGCCCGCTGGACCGCGAGACACAAGACGAGTACAACGTGACCATCGTGGCGCGGGACGGGGGCTCTCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp CCCGTCCCTCCTCCGCCTAGGACCCGACACTGCAGCTGTCCGTTCTaGCCAGAGTCCCGGTCAGTGACCCGCACCAGGGCGATGACGGTG +
Preference number: 6 (lower is better)
Translates to: PVPPPPRTRHCSCPF*PESRSVTRTRAMTV
Trigger: CACCGTCATCGCCCTGGTGCGGGTCACTGACCGGGACTCTGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGGCGGAGGAGGGACGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CTGCAGGCGGAAGCCCAGGCTGCAGTCGAGCATCCCTaGCGATGTTCCCGATCACCGTGCCGGCCCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LQAEAQAAVEHP*RCSRSPCRPLA
Trigger: AGCAAGGGGCCGGCACGGTGATCGGGAACATCGGCAGGGATGCTCGACTGCAGCCTGGGCTTCCGCCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GCGTTGCGCGGCACCTGCAGCTCCGCGGTGTCGTTCTaGAGCGTGGGGAGCACGATCACTGGCGCGTTGTCA +
Preference number: 6 (lower is better)
Translates to: ALRGTCSSAVSF*SVGSTITGALS
Trigger: TGACAACGCGCCAGTGATCGTGCTCCCCACGCTGCAGAACGACACCGCGGAGCTGCAGGTGCCGCGCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CGCGCACAGTGCTCACCAGATAGCCCAGGCCAGCGTTaGGCGGCACCTGCAGCTCCGCGGTGTCGTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RAQCSPDSPGQR*AAPAAPRCRSA
Trigger: TGCAGAACGACACCGCGGAGCTGCAGGTGCCGCGCAACGCTGGCCTGGGCTATCTGGTGAGCACTGTGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CGCTCTCGCCGAAGTCGCTGTCTAGGGCGCGCACAGTaGTCACCAGATAGCCCAGGCCAGCGTTGCGCGGCA +
Preference number: 6 (lower is better)
Translates to: RSRRSRCLGRAQ*SPDSPGQRCAA
Trigger: TGCCGCGCAACGCTGGCCTGGGCTATCTGGTGAGCACTGTGCGCGCCCTAGACAGCGACTTCGGCGAGAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp AGCTCCACCACGGGCGTCACGTCCTCCCAGAAAGGGTaGAGCGTGCGGATCTCGCCGCTGGACGGGTCGATC +
Preference number: 6 (lower is better)
Translates to: SSTTGVTSSQKG*SVRISPLDGSI
Trigger: GATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGCCCGTGGTGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CAA 72 bp CCTCCGCCTAGGACCCGACACTGCAGCTGTCCGTTCTaGCCAGAGTCCCGGTCAGTGACCCGCACCAGGGCG +
Preference number: 6 (lower is better)
Translates to: PPPRTRHCSCPF*PESRSVTRTRA
Trigger: CGCCCTGGTGCGGGTCACTGACCGGGACTCTGGCAAGAACGGACAGCTGCAGTGTCGGGTCCTAGGCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp GAGTTGAGGGGAGGAGAGCCCCCGTCCCGCGCCACGATGGTCACGTaGTACTCGTCTTGTGTCTCGCGGTCCAGCGGGCGGTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: ELRGGEPPSRATMVT*YSSCVSRSSGRSVT
Trigger: GGTGACTGACCGCCCGCTGGACCGCGAGACACAAGACGAGTACAACGTGACCATCGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GAGCCCGCTGTCTGCGTCCACGTCCAGCAGGTGCGGTaGGGAGTTCTCCAGCACCCGGTAGCTACCCGACTT +
Preference number: 6 (lower is better)
Translates to: EPAVCVHVQQVR*GVLQHPVATRL
Trigger: AAGTCGGGTAGCTACCGGGTGCTGGAGAACTCCGCACCGCACCTGCTGGACGTGGACGCAGACAGCGGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp CGACATGTCCCAGTGGTGCTGCTCGCCATTCACCCGTaGTACCCCCTCGGGAAGGGATCCGCTCACCGAGCG +
Preference number: 6 (lower is better)
Translates to: RHVPVVLLAIHP*YPLGKGSAHRA
Trigger: CGCTCGGTGAGCGGATCCCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CAA 90 bp CTCACCGAGCGGATGATGAGCTTGGCCACTGCGGACAGGGTAGGCTaGCCGTGGTCGGTCACCTTCACCACCAGCTCCACCACGGGCGTC +
Preference number: 6 (lower is better)
Translates to: LTERMMSLATADRVG*PWSVTFTTSSTTGV
Trigger: GACGCCCGTGGTGGAGCTGGTGGTGAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTCGGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CAA 90 bp GGTACCCCCTCGGGAAGGGATCCGCTCACCGAGCGGATGATGAGCTaGGCCACTGCGGACAGGGTAGGCTTGCCGTGGTCGGTCACCTTC +
Preference number: 6 (lower is better)
Translates to: GTPSGRDPLTERMMS*ATADRVGLPWSVTF
Trigger: GAAGGTGACCGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTCGGTGAGCGGATCCCTTCCCGAGGGGGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS TCA 72 bp CCACCGTGTAGAAGTTGTCGTAGTTCTCCTCAAGCTTaGAGGGGACGGAACCCCCGGGCCCGCCCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: PPCRSCRSSPQA*RGRNPRARPGP
Trigger: GGGGCCTGGGCGGGCCCGGGGGTTCCGTCCCCTTCAAGCTTGAGGAGAACTACGACAACTTCTACACGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GTCGATGCGCTGCTTGGTGTAGAGGAGCCCGCTGTCTaGGTCCACGTCCAGCAGGTGCGGTGCGGAGTTCTC +
Preference number: 6 (lower is better)
Translates to: VDALLGVEEPAV*VHVQQVRCGVL
Trigger: GAGAACTCCGCACCGCACCTGCTGGACGTGGACGCAGACAGCGGGCTCCTCTACACCAAGCAGCGCATCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp AGCACTGTCACCCTCACCGTGGCGTTGCTCTCCAAGTaGGCGGGCGCCCCCGAGTCCTTAGCAAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: STVTLTVALLSK*AGAPESLASTL
Trigger: CAAGGTGCTTGCTAAGGACTCGGGGGCGCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACAGTGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CCACGGGCGTCACGTCCTCCCAGAAAGGGTGCAGCGTaGGGATCTCGCCGCTGGACGGGTCGATCTCAAACA +
Preference number: 6 (lower is better)
Translates to: PRASRPPRKGAA*GSRRWTGRSQT
Trigger: TGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGGACGTGACGCCCGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 72 bp GTCACGATGAGCGGCAGCGACATGTCCCAGTGGTGCTaGTCGCCATTCACCCGTGGTACCCCCTCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VTMSGSDMSQWC*SPFTRGTPSGR
Trigger: CCTTCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 72 bp GCGAACACCTCGAGGGACAGCTGGCACTTGGCATTGTaGCGGCACAGGGACTCGCGGTCGATGCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: ANTSRDSWHLAL*RHRDSRSMRCL
Trigger: CAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TTGGCGAACACCTCGAGGGACAGCTGGCACTTGGCATaGTGGCGGCACAGGGACTCGCGGTCGATGCGCTGC +
Preference number: 6 (lower is better)
Translates to: LANTSRDSWHLA*WRHRDSRSMRC
Trigger: GCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TCGGGAAGGGATCCGCTCACCGAGCGGATGATGAGCTaGGCCACTGCGGACAGGGTAGGCTTGCCGTGGTCG +
Preference number: 6 (lower is better)
Translates to: SGRDPLTERMMS*ATADRVGLPWS
Trigger: CGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTCGGTGAGCGGATCCCTTCCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CAA 72 bp CATCCGAGTGGCAGGGGTCTCGCTTGCATTAGTCCCTaGTCCGGTGAAGCTGGTGTGGCAGCCCGCGTGCCC +
Preference number: 6 (lower is better)
Translates to: HPSGRGLACISP*SGEAGVAARVP
Trigger: GGGCACGCGGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCCACTCGGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS TCA 72 bp ACAGGTGGTCGTCGTTGCCGTCCACGATCTCGTAGGTaGGACGCCCGCTCTCGCCGAAGTCGCTGTCTAGGG +
Preference number: 6 (lower is better)
Translates to: TGGRRCRPRSRR*DARSRRSRCLG
Trigger: CCCTAGACAGCGACTTCGGCGAGAGCGGGCGTCTCACCTACGAGATCGTGGACGGCAACGACGACCACCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp TGTCCGGTGAAGCTGGTGTGGCAGCCCGCGTGCCCCTaGGGGACAGTCAGGTTGTTGGAGGCCGGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: CPVKLVWQPACP*GTVRLLEAGLR
Trigger: TCTCAAACCGGCCTCCAACAACCTGACTGTCCCTCAGGGGCACGCGGGCTGCCACACCAGCTTCACCGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 72 bp ACTTGGCATTGTGGCGGCACAGGGACTCGCGGTCGATaGGCTGCTTGGTGTAGAGGAGCCCGCTGTCTGCGT +
Preference number: 6 (lower is better)
Translates to: TWHCGGTGTRGR*AAWCRGARCLR
Trigger: ACGCAGACAGCGGGCTCCTCTACACCAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GGATCCGCTCACCGAGCGGATGATGAGCTTGGCCACTaGGGACAGGGTAGGCTTGCCGTGGTCGGTCACCTT +
Preference number: 6 (lower is better)
Translates to: GSAHRADDELGH*GQGRLAVVGHL
Trigger: AAGGTGACCGACCACGGCAAGCCTACCCTGTCCGCAGTGGCCAAGCTCATCATCCGCTCGGTGAGCGGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 72 bp AGAGTCACGATGAGCGGCAGCGACATGTCCCAGTGGTaGTGCTCGCCATTCACCCGTGGTACCCCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: RVTMSGSDMSQW*CSPFTRGTPSG
Trigger: TCCCGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGACTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS GCA 72 bp TGCCCCCACCCAGCTGCGGGTGGCTGTACTCGGCGATaGGGCAGTTGTAAGTGCGGATCTCCTTGTTCTCGC +
Preference number: 6 (lower is better)
Translates to: CPHPAAGGCTRR*GSCKCGSPCSR
Trigger: GCGAGAACAAGGAGATCCGCACTTACAACTGCCGCATCGCCGAGTACAGCCACCCGCAGCTGGGTGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 72 bp TGTCGTTGGCGAACACCTCGAGGGACAGCTGGCACTTaGCATTGTGGCGGCACAGGGACTCGCGGTCGATGC +
Preference number: 6 (lower is better)
Translates to: CRWRTPRGTAGT*HCGGTGTRGRC
Trigger: GCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp TGCCCTTCACACGGATTAGGCCGGTCTTGGGGTCGATaGAGAAGAGCTCCCGCACGCGGTCAGGCACGTAGC +
Preference number: 6 (lower is better)
Translates to: CPSHGLGRSWGR*RRAPARGQARS
Trigger: GCTACGTGCCTGACCGCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACCGGCCTAATCCGTGTGAAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp GCGGTCGATGAGCTTGACCGTGACTTTGCAGTGGGCTaGGATAGGGTTAGGCCCCAGGTCTCGGGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: AVDELDRDFAVG*DRVRPQVSGLH
Trigger: GTGCAGGCCCGAGACCTGGGGCCTAACCCTATCCCAGCCCACTGCAAAGTCACGGTCAAGCTCATCGACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp CCTCCCAGAAAGGGTGCAGCGTGCGGATCTCGCCGCTaGACGGGTCGATCTCAAACAGGTGGTCGTCGTTGC +
Preference number: 6 (lower is better)
Translates to: PPRKGAACGSRR*TGRSQTGGRRC
Trigger: GCAACGACGACCACCTGTTTGAGATCGACCCGTCCAGCGGCGAGATCCGCACGCTGCACCCTTTCTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 72 bp CTCAGAGTCACGATGAGCGGCAGCGACATGTCCCAGTaGTGCTGCTCGCCATTCACCCGTGGTACCCCCTCG +
Preference number: 6 (lower is better)
Translates to: LRVTMSGSDMSQ*CCSPFTRGTPS
Trigger: CGAGGGGGTACCACGGGTGAATGGCGAGCAGCACCACTGGGACATGTCGCTGCCGCTCATCGTGACTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CAA 90 bp CAGTCGAGCATCCCTGCCGATGTTCCCGATCACCGTGCCGGCCCCTaGCTCCTCCGGCACGGAGTAGTTGAGGTTCTTGAGAGTGAGGGC +
Preference number: 6 (lower is better)
Translates to: QSSIPADVPDHRAGP*LLRHGVVEVLESEG
Trigger: GCCCTCACTCTCAAGAACCTCAACTACTCCGTGCCGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACATCGGCAGGGATGCTCGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp CTCAGCGCCCCCTGGCGCACGGAGACGAAACCGATGGACGGCGCATaGTCGTTGCGGTCGATGAGCTTGACCGTGACTTTGCAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: LSAPWRTETKPMDGA*SLRSMSLTVTLQWA
Trigger: AGCCCACTGCAAAGTCACGGTCAAGCTCATCGACCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCGCCAGGGGGCGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp CAGATCTCCTTGTCGTTGGCGAACACCTCGAGGGACAGCTGGCACTaGGCATTGTGGCGGCACAGGGACTCGCGGTCGATGCGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: QISLSLANTSRDSWH*ALWRHRDSRSMRCL
Trigger: CAAGCAGCGCATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp GCCCCCTGGCGCACGGAGACGAAACCGATGGACGGCGCATTGTCGTaGCGGTCGATGAGCTTGACCGTGACTTTGCAGTGGGCTGGGATA +
Preference number: 6 (lower is better)
Translates to: APWRTETKPMDGALS*RSMSLTVTLQWAGI
Trigger: TATCCCAGCCCACTGCAAAGTCACGGTCAAGCTCATCGACCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCGCCAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp CGAGGCGGGTTGTCGTTCTCGTCTAGAATCTTGATCGCGAACGACTaGGTGGAGTTGAGGGGAGGAGAGCCCCCGTCCCGCGCCACGATG +
Preference number: 6 (lower is better)
Translates to: RGGLSFSSRILIAND*VELRGGEPPSRATM
Trigger: CATCGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAACGACAACCCGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TCCGCGGTGTCGTTCTGCAGCGTGGGGAGCACGATCACTGGCGCGTaGTCATTCACGTCTAGCACTGTCACCCTCACCGTGGCGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SAVSFCSVGSTITGA*SFTSSTVTLTVALL
Trigger: GAGCAACGCCACGGTGAGGGTGACAGTGCTAGACGTGAATGACAACGCGCCAGTGATCGTGCTCCCCACGCTGCAGAACGACACCGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp GGTGATTCTGTTGCTCGCGGTCCAGAGCCTTCTGGATaGCCAGTTCTGGGAACTTGGTGCCGTCGCCGCGGG +
Preference number: 6 (lower is better)
Translates to: GDSVARGPEPSG*PVLGTWCRRRG
Trigger: CCCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp CCCGCCCGGAGACTCCGGAATACTCTTCACATCGAGTaGGGGAGGGAGCAGGGAGGTGTGTCTCTAGGCAGA +
Preference number: 6 (lower is better)
Translates to: PARRLRNTLHIE*GREQGGVSLGR
Trigger: TCTGCCTAGAGACACACCTCCCTGCTCCCTCCCCCACTCGATGTGAAGAGTATTCCGGAGTCTCCGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp ATCTCCTTGTCGTTGGCGAACACCTCGAGGGACAGCTaGCACTTGGCATTGTGGCGGCACAGGGACTCGCGG +
Preference number: 6 (lower is better)
Translates to: ISLSLANTSRDS*HLALWRHRDSR
Trigger: CCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp ATCCCTGCCGATGTTCCCGATCACCGTGCCGGCCCCTaGCTCCTCCGGCACGGAGTAGTTGAGGTTCTTGAG +
Preference number: 6 (lower is better)
Translates to: IPADVPDHRAGP*LLRHGVVEVLE
Trigger: CTCAAGAACCTCAACTACTCCGTGCCGGAGGAGCAAGGGGCCGGCACGGTGATCGGGAACATCGGCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TTGTCGTTGGCGAACACCTCGAGGGACAGCTGGCACTaGGCATTGTGGCGGCACAGGGACTCGCGGTCGATG +
Preference number: 6 (lower is better)
Translates to: LSLANTSRDSWH*ALWRHRDSRSM
Trigger: CATCGACCGCGAGTCCCTGTGCCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TCATTCACGTCTAGCACTGTCACCCTCACCGTGGCGTaGCTCTCCAAGTGCGCGGGCGCCCCCGAGTCCTTA +
Preference number: 6 (lower is better)
Translates to: SFTSSTVTLTVA*LSKCAGAPESL
Trigger: TAAGGACTCGGGGGCGCCCGCGCACTTGGAGAGCAACGCCACGGTGAGGGTGACAGTGCTAGACGTGAATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp AATTATGGACATCCGAGTGGCAGGGGTCTCGCTTGCATTAGTCCCTaGTCCGGTGAAGCTGGTGTGGCAGCCCGCGTGCCCCTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: NYGHPSGRGLACISP*SGEAGVAARVPLRD
Trigger: GTCCCTCAGGGGCACGCGGGCTGCCACACCAGCTTCACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS TCA 72 bp TCGCCACCGTCCAGGGCAGTCAGCACGAGCGTATGGTaGTTCTGTTGCTCGCGGTCCAGAGCCTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: SPPSRAVSTSVW*FCCSRSRAFWM
Trigger: CATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCACCATACGCTCGTGCTGACTGCCCTGGACGGTGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp TGGGACCTTCATCGGCGTCGGTGGCGTTCAGATCGATaGCCACTGTACCCAGCGGAGCGTTCTCGGGCAGTT +
Preference number: 6 (lower is better)
Translates to: WDLHRRRWRSDR*PLYPAERSRAV
Trigger: AACTGCCCGAGAACGCTCCGCTGGGTACAGTGGTCATCGATCTGAACGCCACCGACGCCGATGAAGGTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp TTGCTCGCGGTCCAGAGCCTTCTGGATGACCAGTTCTaGGAACTTGGTGCCGTCGCCGCGGGACTTAACGTC +
Preference number: 6 (lower is better)
Translates to: LLAVQSLLDDQF*ELGAVAAGLNV
Trigger: GACGTTAAGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp AGTCCAGATTGCCCTTCACACGGATTAGGCCGGTCTTaGGGTCGATGGAGAAGAGCTCCCGCACGCGGTCAG +
Preference number: 6 (lower is better)
Translates to: SPDCPSHGLGRS*GRWRRAPARGQ
Trigger: CTGACCGCGTGCGGGAGCTCTTCTCCATCGACCCCAAGACCGGCCTAATCCGTGTGAAGGGCAATCTGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp CGGTCCAGAGCCTTCTGGATGACCAGTTCTGGGAACTaGGTGCCGTCGCCGCGGGACTTAACGTCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: RSRAFWMTSSGN*VPSPRDLTSSP
Trigger: TGGACTGGACGTTAAGTCCCGCGGCGACGGCACCAAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp CCCTGGCGCACGGAGACGAAACCGATGGACGGCGCATaGTCGTTGCGGTCGATGAGCTTGACCGTGACTTTG +
Preference number: 6 (lower is better)
Translates to: PWRTETKPMDGA*SLRSMSLTVTL
Trigger: CAAAGTCACGGTCAAGCTCATCGACCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TCGTCTAGAATCTTGATCGCGAACGACTTGGTGGAGTaGAGGGGAGGAGAGCCCCCGTCCCGCGCCACGATG +
Preference number: 6 (lower is better)
Translates to: SSRILIANDLVE*RGGEPPSRATM
Trigger: CATCGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp TCCCTGAACCTGTTGATCTACAGCATCCGCACTGGGTaGGAAGCTGCGGTGCAGCAGAGCTGCAGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLNLLIYSIRTG*EAAVQQSCRGL
Trigger: CAAGCCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCTGTAGATCAACAGGTTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp CCGGGCTGTTGTCGTTGGAGTCAATCACCTTCACGTTaGTCTGTACGGTGGCGGAACGTGGAGGCTCGCCAC +
Preference number: 6 (lower is better)
Translates to: PGCCRWSQSPSR*SVRWRNVEARH
Trigger: GTGGCGAGCCTCCACGTTCCGCCACCGTACAGATCAACGTGAAGGTGATTGACTCCAACGACAACAGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp CGCACGGAGACGAAACCGATGGACGGCGCATTGTCGTaGCGGTCGATGAGCTTGACCGTGACTTTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: RTETKPMDGALS*RSMSLTVTLQW
Trigger: CCACTGCAAAGTCACGGTCAAGCTCATCGACCGCAACGACAATGCGCCGTCCATCGGTTTCGTCTCCGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TCGTTCTGCAGCGTGGGGAGCACGATCACTGGCGCGTaGTCATTCACGTCTAGCACTGTCACCCTCACCGTG +
Preference number: 6 (lower is better)
Translates to: SFCSVGSTITGA*SFTSSTVTLTV
Trigger: CACGGTGAGGGTGACAGTGCTAGACGTGAATGACAACGCGCCAGTGATCGTGCTCCCCACGCTGCAGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp GCCAGGGGTTTCGTCTCTCCCGCCCGGACTTCGGGAGGCTCAAACTaGAGCGATGAGGCAGGCGATAAGAAGGAAATCTCGTCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: ARGFVSPARTSGGSN*SDEAGDKKEISSGR
Trigger: TCTCCCAGACGAGATTTCCTTCTTATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGAAGTCCGGGCGGGAGAGACGAAACCCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp CTCGCCACCGTCCAGGGCAGTCAGCACGAGCGTATGGTGATTCTGTaGCTCGCGGTCCAGAGCCTTCTGGATGACCAGTTCTGGGAACTT +
Preference number: 6 (lower is better)
Translates to: LATVQGSQHERMVIL*LAVQSLLDDQFWEL
Trigger: AAGTTCCCAGAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCACCATACGCTCGTGCTGACTGCCCTGGACGGTGGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TTGTCGTTCTCGTCTAGAATCTTGATCGCGAACGACTTGGTGGAGTaGAGGGGAGGAGAGCCCCCGTCCCGCGCCACGATGGTCACGTTG +
Preference number: 6 (lower is better)
Translates to: LSFSSRILIANDLVE*RGGEPPSRATMVTL
Trigger: CAACGTGACCATCGTGGCGCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAACGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp AGCCCTTTGGTGAACCGAGGCGGGTTGTCGTTCTCGTCTAGAATCTaGATCGCGAACGACTTGGTGGAGTTGAGGGGAGGAGAGCCCCCG +
Preference number: 6 (lower is better)
Translates to: SPLVNRGGLSFSSRI*IANDLVELRGGEPP
Trigger: CGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAACGACAACCCGCCTCGGTTCACCAAAGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CCA 72 bp AAGTTCCCTGAACCTGTTGATCTACAGCATCCGCACTaGGTGAGAAGCTGCGGTGCAGCAGAGCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: KFPEPVDLQHPH*VRSCGAAELQG
Trigger: CCCCTGCAGCTCTGCTGCACCGCAGCTTCTCACCCAGTGCGGATGCTGTAGATCAACAGGTTCAGGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp GTCCAGGGCAGTCAGCACGAGCGTATGGTGATTCTGTaGCTCGCGGTCCAGAGCCTTCTGGATGACCAGTTC +
Preference number: 6 (lower is better)
Translates to: VQGSQHERMVIL*LAVQSLLDDQF
Trigger: GAACTGGTCATCCAGAAGGCTCTGGACCGCGAGCAACAGAATCACCATACGCTCGTGCTGACTGCCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp ACCGGGCTGTTGTCGTTGGAGTCAATCACCTTCACGTaGATCTGTACGGTGGCGGAACGTGGAGGCTCGCCA +
Preference number: 6 (lower is better)
Translates to: TGLLSLESITFT*ICTVAERGGSP
Trigger: TGGCGAGCCTCCACGTTCCGCCACCGTACAGATCAACGTGAAGGTGATTGACTCCAACGACAACAGCCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TTGTCGTTCTCGTCTAGAATCTTGATCGCGAACGACTaGGTGGAGTTGAGGGGAGGAGAGCCCCCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LSFSSRILIAND*VELRGGEPPSR
Trigger: GCGGGACGGGGGCTCTCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAACGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp TCGTCTCTCCCGCCCGGACTTCGGGAGGCTCAAACTTaGGCGATGAGGCAGGCGATAAGAAGGAAATCTCGT +
Preference number: 6 (lower is better)
Translates to: SSLPPGLREAQT*AMRQAIRRKSR
Trigger: ACGAGATTTCCTTCTTATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGAAGTCCGGGCGGGAGAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp CAGGAGCCTTTGTTAGTGTCTTGGTCACTGTCAGCCTaGTCACTGTCCCCGTGCCCACTGTCTCTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: QEPLLVSWSLSA*SLSPCPLSLRL
Trigger: CAGCCTGAGAGACAGTGGGCACGGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS CCA 72 bp GCAACAGATGGAAAGGTACATCCCAGACCTGTAAGGTaGGGGCAGGAGCAATCGGACTGGAGGAGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: ATDGKVHPRPVR*GQEQSDWRSQR
Trigger: TCTCTGGCTCCTCCAGTCCGATTGCTCCTGCCCCCACCTTACAGGTCTGGGATGTACCTTTCCATCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TTCGTCTCTCCCGCCCGGACTTCGGGAGGCTCAAACTaGAGCGATGAGGCAGGCGATAAGAAGGAAATCTCG +
Preference number: 6 (lower is better)
Translates to: FVSPARTSGGSN*SDEAGDKKEIS
Trigger: CGAGATTTCCTTCTTATCGCCTGCCTCATCGCTCAAGTTTGAGCCTCCCGAAGTCCGGGCGGGAGAGACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp TTTGAAGCTTCCCCAGCGCACCGTGAAATGTCTGCTTaGTGCGCGGGCCGGTCTGTTTTCAGGCAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: FEASPAHREMSA*CAGRSVFRQCF
Trigger: AAAACACTGCCTGAAAACAGACCGGCCCGCGCAGCAAGCAGACATTTCACGGTGCGCTGGGGAAGCTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp AGAATCAGTAGGTTTTCCTCGCTCCCGCTAGGGTGCTaGAAATCTACTCCCGCCCGGAGACTCCGGAATACT +
Preference number: 6 (lower is better)
Translates to: RISRFSSLPLGC*KSTPARRLRNT
Trigger: AGTATTCCGGAGTCTCCGGGCGGGAGTAGATTTGCAGCACCCTAGCGGGAGCGAGGAAAACCTACTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CTGAATTATGGACATCCGAGTGGCAGGGGTCTCGCTTaGATTAGTCCCTTGTCCGGTGAAGCTGGTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LNYGHPSGRGLA*ISPLSGEAGVA
Trigger: TGCCACACCAGCTTCACCGGACAAGGGACTAATGCAAGCGAGACCCCTGCCACTCGGATGTCCATAATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS CAA 72 bp GTGAACCGAGGCGGGTTGTCGTTCTCGTCTAGAATCTaGATCGCGAACGACTTGGTGGAGTTGAGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: VNRGGLSFSSRI*IANDLVELRGG
Trigger: TCCTCCCCTCAACTCCACCAAGTCGTTCGCGATCAAGATTCTAGACGAGAACGACAACCCGCCTCGGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TTGATGTCCTGGATCTCTACCTTGATCATGCAGATCTCCTTGTCGTaGGCGAACACCTCGAGGGACAGCTGGCACTTGGCATTGTGGCGG +
Preference number: 6 (lower is better)
Translates to: LMSWISTLIMQISLS*ANTSRDSWHLALWR
Trigger: CCGCCACAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGACATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTAGTGTCTaGGTCACTGTCAGCCTGATCACTGTCCCCGTGCCCACTGTCTCT +
Preference number: 6 (lower is better)
Translates to: CLPNRHVTAGAFVSV*VTVSLITVPVPTVS
Trigger: AGAGACAGTGGGCACGGGGACAGTGATCAGGCTGACAGTGACCAAGACACTAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
ENST00000615375.1
CDS TCA 72 bp TGTTCTCGTGCACCTGAAGCACGTAGAGCCCTTTGGTaGACCGAGGCGGGTTGTCGTTCTCGTCTAGAATCT +
Preference number: 6 (lower is better)
Translates to: CSRAPEARRALW*TEAGCRSRLES
Trigger: AGATTCTAGACGAGAACGACAACCCGCCTCGGTTCACCAAAGGGCTCTACGTGCTTCAGGTGCACGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp CAATCTCCAGCATCCCGTTTTCCTCATAGTCCAGATTaGCCTTCACACGGATTAGGCCGGTCTTGGGGTCGA +
Preference number: 6 (lower is better)
Translates to: QSPASRFPHSPD*PSHGLGRSWGR
Trigger: TCGACCCCAAGACCGGCCTAATCCGTGTGAAGGGCAATCTGGACTATGAGGAAAACGGGATGCTGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TTCAGGCAGTGTTTTGCTGCATTTAGAGATCTAATCTaGCATTGCTGGCTGAGGCAGCGGCGGCGGCGGACT +
Preference number: 6 (lower is better)
Translates to: FRQCFAAFRDLI*HCWLRQRRRRT
Trigger: AGTCCGCCGCCGCCGCTGCCTCAGCCAGCAATGCAAGATTAGATCTCTAAATGCAGCAAAACACTGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TGGATCTCTACCTTGATCATGCAGATCTCCTTGTCGTaGGCGAACACCTCGAGGGACAGCTGGCACTTGGCA +
Preference number: 6 (lower is better)
Translates to: WISTLIMQISLS*ANTSRDSWHLA
Trigger: TGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTAGAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp ATGTCCTGGATCTCTACCTTGATCATGCAGATCTCCTaGTCGTTGGCGAACACCTCGAGGGACAGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: MSWISTLIMQIS*SLANTSRDSWH
Trigger: GTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp GAGGGCGCGTTGTCGTTGATGTCCTGGATCTCTACCTaGATCATGCAGATCTCCTTGTCGTTGGCGAACACC +
Preference number: 6 (lower is better)
Translates to: EGALSLMSWIST*IMQISLSLANT
Trigger: GGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGACATCAACGACAACGCGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TTCCTCTCCTCCACTTCGCTCTGCACCAGCATGATATCATTTTTGTaGATCTTCTTCTTCTTGCCCTTGCCCCCACCCAGCTGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: FLSSTSLCTSMISFL*IFFFLPLPPPSCGW
Trigger: CCACCCGCAGCTGGGTGGGGGCAAGGGCAAGAAGAAGAAGATCAACAAAAATGATATCATGCTGGTGCAGAGCGAAGTGGAGGAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS TCA 72 bp GGAGCAGGGAGGTGTGTCTCTAGGCAGATCCGAAAGTaGAATTCTTACTTGCTGCTCGCCTCCCGTGATGAA +
Preference number: 6 (lower is better)
Translates to: GAGRCVSRQIRK*NSYLLLASRDE
Trigger: TTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCTAGAGACACACCTCCCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TTGTCGTTGATGTCCTGGATCTCTACCTTGATCATGCAGATCTCCTaGTCGTTGGCGAACACCTCGAGGGACAGCTGGCACTTGGCATTG +
Preference number: 6 (lower is better)
Translates to: LSLMSWISTLIMQIS*SLANTSRDSWHLAL
Trigger: CAATGCCAAGTGCCAGCTGTCCCTCGAGGTGTTCGCCAACGACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGACATCAACGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp ATGTCCATTTCGATCTGGTCCGAGGAGAAGGAGGGCGCGTTGTCGTaGATGTCCTGGATCTCTACCTTGATCATGCAGATCTCCTTGTCG +
Preference number: 6 (lower is better)
Translates to: MSISIWSEEKEGALS*MSWISTLIMQISLS
Trigger: CGACAAGGAGATCTGCATGATCAAGGTAGAGATCCAGGACATCAACGACAACGCGCCCTCCTTCTCCTCGGACCAGATCGAAATGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp ATTGATGGGGATGAAGAGCAACGAAGACAGAGTCACAGATATATTTaGAAGCTTCCCCAGCGCACCGTGAAATGTCTGCTTGCTGCGCGG +
Preference number: 6 (lower is better)
Translates to: IDGDEEQRRQSHRYI*KLPQRTVKCLLAAR
Trigger: CCGCGCAGCAAGCAGACATTTCACGGTGCGCTGGGGAAGCTTCAAAATATATCTGTGACTCTGTCTTCGTTGCTCTTCATCCCCATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 72 bp TCCACTTCGCTCTGCACCAGCATGATATCATTTTTGTaGATCTTCTTCTTCTTGCCCTTGCCCCCACCCAGC +
Preference number: 6 (lower is better)
Translates to: STSLCTSMISFL*IFFFLPLPPPS
Trigger: GCTGGGTGGGGGCAAGGGCAAGAAGAAGAAGATCAACAAAAATGATATCATGCTGGTGCAGAGCGAAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS TCA 72 bp CACTCTTCTGGTTCTGGAGGAAGCAGATCAACAGACTaGAGTCTACTTGTGATGGTGTGTAGGGTGAGGATA +
Preference number: 6 (lower is better)
Translates to: HSSGSGGSRSTD*SLLVMVCRVRI
Trigger: TATCCTCACCCTACACACCATCACAAGTAGACTTCAGTCTGTTGATCTGCTTCCTCCAGAACCAGAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615375.1
CDS GCA 72 bp TCTCTAGGCAGATCCGAAAGTGAAATTCTTACTTGCTaGTCGCCTCCCGTGATGAAATTGATGGGGATGAAG +
Preference number: 6 (lower is better)
Translates to: SLGRSESEILTC*SPPVMKLMGMK
Trigger: CTTCATCCCCATCAATTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGATCTGCCTAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS GCA 72 bp GAGCTACTGAAATACTTTGAACAAACTGCTGCCTGCTaGCCATGTAATTGGGCTCTGCGGGAAAATTGTCTG +
Preference number: 6 (lower is better)
Translates to: ELLKYFEQTAAC*PCNWALRENCL
Trigger: CAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTATTTCAGTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS GCA 72 bp GTGGAGCTACTGAAATACTTTGAACAAACTGCTGCCTaGTGCCCATGTAATTGGGCTCTGCGGGAAAATTGT +
Preference number: 6 (lower is better)
Translates to: VELLKYFEQTAA*CPCNWALRENC
Trigger: ACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTATTTCAGTAGCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484979.5
CDS CCA 72 bp AGCTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGG +
Preference number: 6 (lower is better)
Translates to: SFEQTAACCPCN*ALRENCLSELW
Trigger: CCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612954.4
CDS GCA 72 bp ATGACGTTCATGGCGTTCCTCTCCTCCACTTCGCTCTaGACCAGCATGATATCATTTTTGTTGATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: MTFMAFLSSTSL*TSMISFLLIFF
Trigger: GAAGAAGATCAACAAAAATGATATCATGCTGGTGCAGAGCGAAGTGGAGGAGAGGAACGCCATGAACGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000612954.4
CDS CCA 72 bp TACTTTGAACAAACTGCTGCCTGCTGCCCATGTAATTaGGCTCTGCGGGAAAATTGTCTGTCTGAATTATGG +
Preference number: 6 (lower is better)
Translates to: YFEQTAACCPCN*ALRENCLSELW
Trigger: CCATAATTCAGACAGACAATTTTCCCGCAGAGCCCAATTACATGGGCAGCAGGCAGCAGTTTGTTCAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377918.8
ENST00000484979.5
ENST00000615375.1
CDS CAA 72 bp GATGAAGAGCAACGAAGACAGAGTCACAGATATATTTaGAAGCTTCCCCAGCGCACCGTGAAATGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: DEEQRRQSHRYI*KLPQRTVKCLL
Trigger: AAGCAGACATTTCACGGTGCGCTGGGGAAGCTTCAAAATATATCTGTGACTCTGTCTTCGTTGCTCTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS CAA 90 bp TCCGAAAGTGAAATTCTTACTTGCTGCTCGCCTCCCGTGATGAAATaGATGGGGATGAAGAGCAACGAAGACAGAGTCACAGATATATTT +
Preference number: 6 (lower is better)
Translates to: SESEILTCCSPPVMK*MGMKSNEDRVTDIF
Trigger: AAATATATCTGTGACTCTGTCTTCGTTGCTCTTCATCCCCATCAATTTCATCACGGGAGGCGAGCAGCAAGTAAGAATTTCACTTTCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377918.8
ENST00000484979.5
CDS TCA 72 bp AGTCGGGAATGCTTGTTCAAGTGGTTGGCTTTTAGTTaGAGTAGTTTTCATCTTGAGTGCCTCCCTAACAGA +
Preference number: 6 (lower is better)
Translates to: SRECLFKWLAFS*SSFHLECLPNR
Trigger: TCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGCATTCCCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615375.1
CDS CAA 90 bp AATGCTTGTTCAAGTGGTTGGCTTTTAGTTGAAGTAGTTTTCATCTaGAGTGCCTCCCTAACAGACATGTCACAGCAGGAGCCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: NACSSGWLLVEVVFI*SASLTDMSQQEPLL
Trigger: TAACAAAGGCTCCTGCTGTGACATGTCTGTTAGGGAGGCACTCAAGATGAAAACTACTTCAACTAAAAGCCAACCACTTGAACAAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615375.1