RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH15 (Homo sapiens)

Ensembl gene IDs: ENSG00000150275

Ensembl transcript IDs: ENST00000320301.10, ENST00000320301.11, ENST00000361849.7, ENST00000373955.5, ENST00000373956.7, ENST00000373957.7, ENST00000373965.6, ENST00000395430.5, ENST00000395433.5, ENST00000395440.5, ENST00000395442.5, ENST00000395445.5, ENST00000395445.6, ENST00000395446.5, ENST00000409834.5, ENST00000414367.5, ENST00000437009.5, ENST00000448885.5, ENST00000458638.1, ENST00000463095.2, ENST00000476074.5, ENST00000495484.5, ENST00000613346.4, ENST00000613657.4, ENST00000613657.5, ENST00000615043.1, ENST00000616114.4, ENST00000617271.4, ENST00000618301.4, ENST00000621708.4, ENST00000642496.1, ENST00000644397.2

Found 2284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCTGAACATAGCGATCCAAGATCTCTG +
Preference number: 1 (lower is better)
Translates to: RHLHAGELQWTPLRP*HQEFVPEHSDPRSL
Trigger: CAGAGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 90 bp TCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGTAAGCTaGCTGACTGACTCCACAGCCTCTGAATCTTTTCTCTTGGGCCCC +
Preference number: 1 (lower is better)
Translates to: SLVYLELSSSASWVS*LTDSTASESFLLGP
Trigger: GGGGCCCAAGAGAAAAGATTCAGAGGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp GTGGGATCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTaGTGGACATCACAGGCTCCCCATCATCAAAAGCAACCACCACCA +
Preference number: 1 (lower is better)
Translates to: VGSHQDVRQESSLWH*WTSQAPHHQKQPPP
Trigger: TGGTGGTGGTTGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGATCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp GTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTaGTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTC +
Preference number: 1 (lower is better)
Translates to: VPDSPMDLQTDFRYY*YYYLILIPPHFPHL
Trigger: GAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR GCA 90 bp AACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAG +
Preference number: 1 (lower is better)
Translates to: NLQSLLLATSFGLHS*FCHTLVPDSPMDLQ
Trigger: CTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CCA 90 bp TGTAATCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGGCACCAGGAATTTGTTCCTGAACAT +
Preference number: 1 (lower is better)
Translates to: CNLLGKRHLHAGELQ*TPLRPWHQEFVPEH
Trigger: ATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 90 bp TTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAGAGGGTGTCTCTGACTCAGATTCCT +
Preference number: 1 (lower is better)
Translates to: FLLLTLWIPILLIQG*NSPPPQRVSLTQIP
Trigger: AGGAATCTGAGTCAGAGACACCCTCTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CCA 90 bp CTCTGTTGGTTTGGGGGTCAATTGCATAGACAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTC +
Preference number: 1 (lower is better)
Translates to: LCWFGGQLHRQSSHI*CNLLGKRHLHAGEL
Trigger: GAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGATTACACCAAATGTGACTTGACTGTCTATGCAATTGACCCCCAAACCAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp TGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGG +
Preference number: 1 (lower is better)
Translates to: CVVTFRVCSWRLLLV*ILASVIRWYLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 90 bp CTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGTTGCTTCCTCTTGGTCCAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: LFFTVFSIVAGGFLL*FYSAFCCFLLVQSE
Trigger: CTCACTCTGGACCAAGAGGAAGCAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 90 bp CACTGCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTaGTCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCC +
Preference number: 1 (lower is better)
Translates to: HCTREHSSQQNFHLL*SLSKCCVVTFRVCS
Trigger: GGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR GCA 90 bp CCAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTaGAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGC +
Preference number: 1 (lower is better)
Translates to: PVFSFSAFCLVPCHC*RSMISGLFGTFLIS
Trigger: GCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAAAATGAAAACACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp GGGGAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACT +
Preference number: 1 (lower is better)
Translates to: GEYSGSLPCCVCRLS*WWFFDSYNYFFLLT
Trigger: AGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR CCA 90 bp TATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTC +
Preference number: 1 (lower is better)
Translates to: YSGSLPCCVCRLSCW*FFDSYNYFFLLTRL
Trigger: GAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR GCA 90 bp GAGTACATCGGCTTTGCCGCTCAGTCCCTTCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGAA +
Preference number: 1 (lower is better)
Translates to: EYIGFAAQSLPIVVS*NNLKLEVGSPHIME
Trigger: TTCCATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGG +
Preference number: 1 (lower is better)
Translates to: EYSGSLPCCVCRLSC*WFFDSYNYFFLLTR
Trigger: CCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR TCA 90 bp TTATCATCAATGTCCAAAACCTTGATGGCCAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCATCTGTTGCCACAACAACAAGTTCA +
Preference number: 1 (lower is better)
Translates to: LSSMSKTLMAKVRVE*RGCTAPSVATTTSS
Trigger: TGAACTTGTTGTTGTGGCAACAGATGGAGCAGTACACCCTCGTCATTCAACTCTAACCTTGGCCATCAAGGTTTTGGACATTGATGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 90 bp TTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAGATAAATTTCTTGGCAGATAAGGAT +
Preference number: 1 (lower is better)
Translates to: FQHQGLLLLLDPQRH*LLLPPQINFLADKD
Trigger: ATCCTTATCTGCCAAGAAATTTATCTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 90 bp GGTAGTCCCAGCTGGCAAATTCTCTTCAACAAGGACAGTGTATGTTaGATTGGTGAACACAGGACTGTTATCATCAATGTCCAAAACCTT +
Preference number: 1 (lower is better)
Translates to: GSPSWQILFNKDSVC*IGEHRTVIINVQNL
Trigger: AAGGTTTTGGACATTGATGATAACAGTCCTGTGTTCACCAATTCAACATACACTGTCCTTGTTGAAGAGAATTTGCCAGCTGGGACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 90 bp CAGGTGGCATTGTTCCATAAATATCAAAGGCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTGGAAATGCCTCATAATCTAAACTCC +
Preference number: 1 (lower is better)
Translates to: QVALFHKYQRPLPEK*YLLLGLEMPHNLNS
Trigger: GGAGTTTAGATTATGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGATATTTATGGAACAATGCCACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp CCTTCAGCCTTATCGCTGTGTAATTTGCAGGCACCAATAGGCATCTaGCCTGAGAATAGATTATTAGCACTTTTTGCCTATTTTGCTAAT +
Preference number: 1 (lower is better)
Translates to: PSALSLCNLQAPIGI*PENRLLALFAYFAN
Trigger: ATTAGCAAAATAGGCAAAAAGTGCTAATAATCTATTCTCAGGGCAGATGCCTATTGGTGCCTGCAAATTACACAGCGATAAGGCTGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CCA 90 bp CTCGTGTTATTACTCTTCCAGAATCTTCTTCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTACATCATCTACTCTATACCTCACAC +
Preference number: 1 (lower is better)
Translates to: LVLLLFQNLLPLQKY*QGKETVHHLLYTSH
Trigger: GTGTGAGGTATAGAGTAGATGATGTACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGGAAGAAGATTCTGGAAGAGTAATAACACGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 90 bp CCCTGTATATGTTTCCACTACAAATCCTTCTTTTCCCTCTTTAATTaGTGGTATTATGAGTCTGTAGGCCATGACACTATAATTGCCAGT +
Preference number: 1 (lower is better)
Translates to: PCICFHYKSFFSLFN*WYYESVGHDTIIAS
Trigger: ACTGGCAATTATAGTGTCATGGCCTACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAAACATATACAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 90 bp AACAACAAGTTCATAGTAGTCCCTGACTTCTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATTGGATGTGATACGAAAAAGATTATT +
Preference number: 1 (lower is better)
Translates to: NNKFIVVPDFSVKLH*CVNAPIGCDTKKII
Trigger: AATAATCTTTTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAAGTCAGGGACTACTATGAACTTGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 90 bp TGTATATGTTTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGCCATGACACTATAATTGCCAGTATC +
Preference number: 1 (lower is better)
Translates to: CICFHYKSFFSLFNW*YYESVGHDTIIASI
Trigger: GATACTGGCAATTATAGTGTCATGGCCTACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAAACATATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 2 (lower is better)
Translates to: HCLWSPDLQNASSFPIIREKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 2 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 2 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SSREKASPCRRAPMDSTTKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: LPPKLILHCPLQGYLELQSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414367.5
3UTR-3UTR TCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 2 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: PPKLILHCPLQGYLELQGLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 2 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: PPKLILHCPLQGYLELQGTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 2 (lower is better)
Translates to: SSREKASPCRRAPMDSTTQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 2 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 2 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 2 (lower is better)
Translates to: LPPKLILHCPLQGYLELQGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRSLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 2 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 2 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: YLIAPWTSRLTFATTATTTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 2 (lower is better)
Translates to: PPKLILHCPLQGYLELQGVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAATCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 2 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: NGGRRGGVGGPDVETESGTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 2 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp CCGGCGAGCTCCAATGGACTCCACTACGACCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATCCAAGATCTCTGTAAGATCTTCTAT +
Preference number: 2 (lower is better)
Translates to: PASSNGLHYDLGTRN*FLNIAIQDLCKIFY
Trigger: ATAGAAGATCTTACAGAGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 2 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 2 (lower is better)
Translates to: QRMMMKARANKAPSVYPRYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
3UTR-3UTR CCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 2 (lower is better)
Translates to: LPPKLILHCPLQGYLELQCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAACTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp CTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATG +
Preference number: 2 (lower is better)
Translates to: LCCNLQSLLLATSFG*HSCFCHTLVPDSPM
Trigger: CATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 2 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 2 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 2 (lower is better)
Translates to: SSREKASPCRRAPMDSTTPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: SAAGGFSIVTTTSSSSLGTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...GCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGATCTCTGGTCTATTTaGAACTTTCCTCATCAGCCT +
Preference number: 2 (lower is better)
Translates to: NGGRRGGVGGPDVETESGDLWSI*NFPHQP
Trigger: AGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 2 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 2 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp AAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCC +
Preference number: 2 (lower is better)
Translates to: KCCVVTFRVCSWRLL*VCILASVIRWYLIA
Trigger: GGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 2 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 2 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: SAAGGFSIVTTTSSSSLGGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...GCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR-3UTR TCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGACTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 2 (lower is better)
Translates to: RIFTVALLDITGSPSSKASIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 2 (lower is better)
Translates to: SKASTRKVILASWSGNASMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 2 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATGTGGATGCTTGTTTaGCAGGCCAGGAGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIMWMLV*QARRCG
Trigger: ACCACACCTCCTGGCCTGCCAAACAAGCATCCACAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 2 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 2 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGCTGAATCTTTTCTCTTaGGCCCCTCAGAGACTTACT +
Preference number: 2 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGLNLFS*APQRLT
Trigger: AGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAG...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCATGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 2 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 2 (lower is better)
Translates to: LVCILASVIRWYLIAPWTIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 2 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp GGCTTTGCCGCTCAGTCCCTTCCCATAGTCGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCTCCTCATATTATGGAAGAGCATAGC +
Preference number: 2 (lower is better)
Translates to: GFAAQSLPIVVSCNN*KLEVGSPHIMEEHS
Trigger: GCTATGCTCTTCCATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTATGGGAAGGGACTGAGCGGCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 2 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 2 (lower is better)
Translates to: STLYLTRLAGNPGGSASSKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 2 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 2 (lower is better)
Translates to: NGGRRGGVGGPDVETESGRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 2 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 2 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAGAAGGAAAAGATTATaGATTGAGCTGTCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: NGGRRGGVGGPDVETESGRRKRL*IELSPS
Trigger: ACTTGGAGACAGCTCAATGCATAATCTTTTCCTTCT...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448885.5
3UTR-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGATCTCTGGTCTATTTaGAACTTTCCTCATCAGCCT +
Preference number: 2 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRDLWSI*NFPHQP
Trigger: AGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAATGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 2 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 2 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp GATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCAAGTaGGTCGTGCATTTAACACCTGTTATACAGACACACTCTGTGGAC +
Preference number: 2 (lower is better)
Translates to: DSCVIEDLIFSAGIK*VVHLTPVIQTHSVD
Trigger: GTCCACAGAGTGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGAGAAAATTAAGTCCTCTATGACACAGCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCATGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 2 (lower is better)
Translates to: RIFTVALLDITGSPSSKACMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 2 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACAGGCATTTCATACATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHRHFIH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGTATGAAATGCCT...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
3UTR-3UTR GCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 2 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 2 (lower is better)
Translates to: TGAGPLSSSSECSSSSILVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 2 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 2 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 2 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 2 (lower is better)
Translates to: RIFTVALLDITGSPSSKASSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 2 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 2 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCTAGTGACATTAATGTaGGACTTCCCTAACCTCACC +
Preference number: 2 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILVTLM*DFPNLT
Trigger: GGTGAGGTTAGGGAAGTCTCACATTAATGTCACTAG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACATTGCTTTGGTGCCTaGAGGAATAAGCCCCGGACT +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIHCFGA*RNKPRT
Trigger: AGTCCGGGGCTTATTCCTTCAGGCACCAAAGCAATG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCATTGCTTTGGTGCCTaGAGGAATAAGCCCCGGACT +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHHCFGA*RNKPRT
Trigger: AGTCCGGGGCTTATTCCTTCAGGCACCAAAGCAATG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 2 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 2 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 2 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 2 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCACCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 2 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 2 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 2 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 2 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCC +
Preference number: 2 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQAFGLS*VSNFHA
Trigger: GGCATGAAAATTAGATACCCAACTTAAACCAAAGGC...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 2 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 2 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 2 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 2 (lower is better)
Translates to: VVTFRVCSWRLLLVCILASWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 2 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 2 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp GTCCCAGCTGGCAAATTCTCTTCAACAAGGACAGTGTATGTTGAATaGGTGAACACAGGACTGTTATCATCAATGTCCAAAACCTTGATG +
Preference number: 2 (lower is better)
Translates to: VPAGKFSSTRTVYVE*VNTGLLSSMSKTLM
Trigger: CATCAAGGTTTTGGACATTGATGATAACAGTCCTGTGTTCACCAATTCAACATACACTGTCCTTGTTGAAGAGAATTTGCCAGCTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCAAGGGATGCTGACTaGGATGATCTGGGGGTATCA +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSRDAD*DDLGVS
Trigger: TGATACCCCCAGATCATCTCAGTCAGCATCCCTTGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 2 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGATCAACAAGAGGTTTaGCCGACTAAAATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNDQQEV*PTKIRK
Trigger: TTTTCTTATTTTAGTCGGGCAAACCTCTTGTTGATC...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGCCCCGGACTTCATTaGTTCCAAAATTTAATGTGC +
Preference number: 2 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISPGLH*FQNLMC
Trigger: GCACATTAAATTTTGGAAGCAATGAAGTCCGGGGCT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 2 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 2 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTTTCTCTGTCAAATTTaGCTCTTCAGTTGTAAGCAA +
Preference number: 2 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRFLCQI*LFSCKQ
Trigger: TTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: GMLLIISHIKILINFLPFTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395445.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000613657.4
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCC +
Preference number: 2 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDAFGLS*VSNFHA
Trigger: GGCATGAAAATTAGATACCCAACTTAAACCAAAGGC...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 2 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 2 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 2 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 2 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 2 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395445.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000613657.4
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCACCTTAGGATCTTTTaGAAATGTGGATGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIHLRIF*KCGCLF
Trigger: AAACAAGCATCCACATTTTCAAAAGATCCTAAGGTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCTGTTTCTTCTGCCTaGTTGAAGCTAGTGCTGATT +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAVSSA*LKLVLI
Trigger: AATCAGCACTAGCTTCAATCAGGCAGAAGAAACAGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAATGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 2 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACCTGCTGTTTCTTCTaGCTGATTGAAGCTAGTGCT +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITCCFF*LIEASA
Trigger: AGCACTAGCTTCAATCAGGCAGAAGAAACAGCAGGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCGATTAGCCAAGACCTaGTGTTTCTTCTGCCTGATT +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRLAKT*CFFCLI
Trigger: AATCAGGCAGAAGAAACAGCAGGTCTTGGCTAATCG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGGCCAACCTACGGTTaGAATTCTATGACAACTCTC +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIWPTYG*NSMTTL
Trigger: GAGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 2 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTACATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 2 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 2 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAGGAGGTGTGGTCATaGTTCTACGTTTCTAATCTA +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQEVWS*FYVSNL
Trigger: TAGATTAGAAACGTAGAATCATGACCACACCTCCTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCGCAAAACATTTGGTTaGATCCGTGTACCTAATTCC +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRKTFG*IRVPNS
Trigger: GGAATTAGGTACACGGATTCAACCAAATGTTTTGCG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCGCAAAACATTTGGTTaGATCCGTGTACCTAATTCC +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRKTFG*IRVPNS
Trigger: GGAATTAGGTACACGGATTCAACCAAATGTTTTGCG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACGGTTGCAATTCTATaGCAACTCTCAGAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITVAIL*QLSESV
Trigger: TACAGACTCTGAGAGTTGTCATAGAATTGCAACCGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTACAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 2 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 2 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTGATCAACAAGAGGTTTaGCCGACTAAAATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSDQQEV*PTKIRK
Trigger: TTTTCTTATTTTAGTCGGGCAAACCTCTTGTTGATC...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGCCCCGGACTTCATTaGTTCCAAAATTTAATGTGC +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMISPGLH*FQNLMC
Trigger: GCACATTAAATTTTGGAAGCAATGAAGTCCGGGGCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAGGCAATGATTTCCTaGTTCTGGATTTTAGGCACA +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQAMIS*FWILGT
Trigger: TGTGCCTAAAATCCAGAACCAGGAAATCATTGCCTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 2 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 90 bp AAATCTACTGGTAACCAAAGAAAGCGTCTAAGAGTCGCAAAACATTaGGTTGAATCCGTGTACCTAATTCCCATCTTAAGCTTCATGATT +
Preference number: 2 (lower is better)
Translates to: KSTGNQRKRLRVAKH*VESVYLIPILSFMI
Trigger: AATCATGAAGCTTAAGATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTTTCTTTGGTTACCAGTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CAA 90 bp TGTGATACGAAAAAGATTATTAAAGTTACCCAAACTGTAGTGCACTaGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACC +
Preference number: 2 (lower is better)
Translates to: CDTKKIIKVTQTVVH*TIYSSIRVCCFYLT
Trigger: GGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACTACAGTTTGGGTAACTTTAATAATCTTTTTCGTATCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCATGTCTTCCATTATaGAATTGTCGTTCTAGATGC +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPCLPL*NCRSRC
Trigger: GCATCTAGAACGACAATTTCATAATGGAAGACATGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACCATGTCTTCCATTATaGAATTGTCGTTCTAGATGC +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIPCLPL*NCRSRC
Trigger: GCATCTAGAACGACAATTTCATAATGGAAGACATGG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGAAGCTAGTGCTGATTaGGAACAACAAGAAAACCTT +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHEASAD*EQQENL
Trigger: AAGGTTTTCTTGTTGTTCTCAATCAGCACTAGCTTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGGCCACTAGACTTCTaGCAACATCATATTTCCAAA +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRPLDF*QHHISK
Trigger: TTTGGAAATATGATGTTGGCAGAAGTCTAGTGGCCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCACCAATAGGCATCTaGCCTGAGAATAGATTATTA +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAPIGI*PENRLL
Trigger: TAATAATCTATTCTCAGGGCAGATGCCTATTGGTGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACATACGACTTCAAGTaGTTTCCTAAAGGGTCAAGA +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMITYDFK*FPKGSR
Trigger: TCTTGACCCTTTAGGAAACCACTTGAAGTCGTATGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAGATTAAACATACCTaGGTATTTCCTCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKIKHT*VFPLGS
Trigger: GGAACCCAGAGGAAATACCCAGGTATGTTTAATCTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 2 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CAA 90 bp ATTCACTTTTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTaGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAGAACACACA +
Preference number: 2 (lower is better)
Translates to: IHFSGMLLIISHIKI*INFLPFKCHFGEHT
Trigger: TGTGTGTTCTCCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAAAAGTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395445.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000613657.4
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAAATTCCTTTACTCTaGTATGCTGGGTTTACAAAC +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQIPLL*YAGFTN
Trigger: GTTTGTAAACCCAGCATATCAGAGTAAAGGAATTTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCAAATTCCTTTACTCTaGTATGCTGGGTTTACAAAC +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIQIPLL*YAGFTN
Trigger: GTTTGTAAACCCAGCATATCAGAGTAAAGGAATTTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACACCTTAGGATCTTTTaGAAATGTGGATGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIHLRIF*KCGCLF
Trigger: AAACAAGCATCCACATTTTCAAAAGATCCTAAGGTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTTAATGGTAACTACTaGATCACCTTTGGAACAACC +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFNGNY*ITFGTT
Trigger: GGTTGTTCCAAAGGTGATTCAGTAGTTACCATTAAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATACAGAGACTACTTTTaGTGTCTTGTGATTCGGTCA +
Preference number: 2 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSYRDYF*CLVIRS
Trigger: TGACCGAATCACAAGACAGCAAAAGTAGTCTCTGTA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
3UTR-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAATTGTCGTTCTAGATaGATTACTGCTTACTCGAAC +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVINCRSR*ITAYSN
Trigger: GTTCGAGTAAGCAGTAATGCATCTAGAACGACAATT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 2 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR GCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTATACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 2 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTGACTGAGATGATCTaGGGGTATCAAGATAATATT +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILTEMI*GYQDNI
Trigger: AATATTATCTTGATACCCCCAGATCATCTCAGTCAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTGACTGAGATGATCTaGGGGTATCAAGATAATATT +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMILTEMI*GYQDNI
Trigger: AATATTATCTTGATACCCCCAGATCATCTCAGTCAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACACCTGTGATTCGATaGTCATTAAGTCACAAATGT +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMITPVIR*SLSHKC
Trigger: ACATTTGTGACTTAATGACCATCGAATCACAGGTGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACACCTGTGATTCGATaGTCATTAAGTCACAAATGT +
Preference number: 2 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITPVIR*SLSHKC
Trigger: ACATTTGTGACTTAATGACCATCGAATCACAGGTGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTAAAAAGATGGTTTTaGCCAACCTACGGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMILKRWF*PTYGCN
Trigger: ATTGCAACCGTAGGTTGGCCAAAACCATCTTTTTAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CAA 90 bp GCAACCACCACCAACTTAAAAATTGTTGTAGGTTCTTCATTAAGATaGACTCGTGTTATTACTCTTCCAGAATCTTCTTCCACTTCAAAA +
Preference number: 2 (lower is better)
Translates to: ATTTNLKIVVGSSLR*TRVITLPESSSTSK
Trigger: TTTTGAAGTGGAAGAAGATTCTGGAAGAGTAATAACACGAGTCAATCTTAATGAAGAACCTACAACAATTTTTAAGTTGGTGGTGGTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTACTGAATCACCTTTaGAACAACCACTTAAGTAAA +
Preference number: 2 (lower is better)
Translates to: QKMSSLESQYSITSGSMILLNHL*NNHLSK
Trigger: TTTACTTAAGTGGTTGTTCCAAAGGTGATTCAGTAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATCAACAAGAGGTTTaGCCGACTAAAATAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDQQEV*PTKIRK
Trigger: TTTTCTTATTTTAGTCGGGCAAACCTCTTGTTGATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000320301.10
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
3UTR CCA 72 bp TGGCGGAGGCGGCGGCGGCGGCGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGG +
Preference number: 3 (lower is better)
Translates to: WRRRRRRRGRCH*CRSRHCWFSRG
Trigger: CCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCGCCGCCGCCGCCGCCTCCGCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
3UTR-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 3 (lower is better)
Translates to: QRMMMKARANKAPSVYPRTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 72 bp TGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAATACGGCTGAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: CWSLPLESGSPE*VLLPHNTAESL
Trigger: AAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
3UTR CCA 72 bp CATGCCGGCGAGCTCCAATGGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCTGAACATAGCGATCCA +
Preference number: 3 (lower is better)
Translates to: HAGELQWTPLRP*HQEFVPEHSDP
Trigger: TGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp CTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGGCACCAGGAATTTGTT +
Preference number: 3 (lower is better)
Translates to: LGKRHLHAGELQ*TPLRPWHQEFV
Trigger: AACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp CCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTaGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: PGALPLLQIYDL*SIWNFPHQPPG
Trigger: CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp CTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAGAGGGTGTCTCTGACT +
Preference number: 3 (lower is better)
Translates to: LTLWIPILLIQG*NSPPPQRVSLT
Trigger: AGTCAGAGACACCCTCTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 3 (lower is better)
Translates to: LVCILASVIRWYLIAPWTLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 3 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 3 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 72 bp GGAGGCACATTGGAAACAATGACTTGCATATCCAGCTaGTTGACCACGGAGACGAGTACATCGGCTTTGCCG +
Preference number: 3 (lower is better)
Translates to: GGTLETMTCISS*LTTETSTSALP
Trigger: CGGCAAAGCCGATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATaGACCTCCAGACTGACTTTCGCTACTACTGCTACT +
Preference number: 3 (lower is better)
Translates to: LASVIRWYLIAP*TSRLTFATTAT
Trigger: AGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 3 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: QRMMMKARANKAPSVYPRIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 3 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 3 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTTTCTGCCTGGTGCCTaGCCACTGCTGCAGATCTAT +
Preference number: 3 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRFLPGA*PLLQIY
Trigger: ATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp TCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 3 (lower is better)
Translates to: SAAGGFSIVTTTSSSSLGLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...GCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCATGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: TYFKLSVADQNHQDGRNACLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 3 (lower is better)
Translates to: RIFTVALLDITGSPSSKAVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 3 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 3 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACGAGGCATTTCATACATaGAGCTGTCTCCAAGTTCTT +
Preference number: 3 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDEAFHT*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGTATGAAATGCCTC...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
3UTR GCA 72 bp CACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTaGTGGACATCACAGGCTCCCCATCATCAAAAGCAA +
Preference number: 3 (lower is better)
Translates to: HQDVRQESSLWH*WTSQAPHHQKQ
Trigger: TTGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 72 bp AGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTaGTACTACTACCTGATTCTGATTCCTCCTCACTTT +
Preference number: 3 (lower is better)
Translates to: SPMDLQTDFRYY*YYYLILIPPHF
Trigger: AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAATGTGGATGCTTGTTaGGCAGGCCAGGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: KRLRVAKHLVESVYLIPINVDAC*AGQEVW
Trigger: CCACACCTCCTGGCCTGCCAAACAAGCATCCACATT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 3 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 3 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 3 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: LVCILASVIRWYLIAPWTFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGTTATTTCCCCTGCTTaGTTGAAAATGGTAGAGAAG +
Preference number: 3 (lower is better)
Translates to: NGGRRGGVGGPDVETESGVISPA*LKMVEK
Trigger: CTTCTCTACCATTTTCAACAAAGCAGGGGAAATAAC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAACCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp ATGTCCAAAACCTTGATGGCCAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCATCTGTTGCCACAACA +
Preference number: 3 (lower is better)
Translates to: MSKTLMAKVRVE*RGCTAPSVATT
Trigger: TGTTGTGGCAACAGATGGAGCAGTACACCCTCGTCATTCAACTCTAACCTTGGCCATCAAGGTTTTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 72 bp GTTCACTTACTGGAGGAGGTCTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAGGATGTAAGACAAGAA +
Preference number: 3 (lower is better)
Translates to: VHLLEEVYIPPV*SVGSHQDVRQE
Trigger: TTCTTGTCTTACATCCTGGTGAGATCCCACGCTTCACACAGGAGGAATATAGACCTCCTCCAGTAAGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR TCA 72 bp TATTTGGAACTTTCCTCATCAGCCTCCTGGGTAAGCTaGCTGACTGACTCCACAGCCTCTGAATCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: YLELSSSASWVS*LTDSTASESFL
Trigger: GAGAAAAGATTCAGAGGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp CAGCAGCAGAAATTACACCAACCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAGGAGGTCTATATTCCT +
Preference number: 3 (lower is better)
Translates to: QQQKLHQPWSLW*QVHLLEEVYIP
Trigger: AGGAATATAGACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp TGGCAGCAGCAGAAATTACACCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTGGAGGAGGTCTATATT +
Preference number: 3 (lower is better)
Translates to: WQQQKLHQPWSL*WQVHLLEEVYI
Trigger: AATATAGACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 3 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 3 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: GAGPLSSSSECSSSSILGLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp ACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGTTGCTTCCTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: TVFSIVAGGFLL*FYSAFCCFLLV
Trigger: GACCAAGAGGAAGCAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR GCA 72 bp CTTCACTTCTGGGCTTCTTATCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTTGGCCTCTATTTGAAG +
Preference number: 3 (lower is better)
Translates to: LHFWASYPVRHI*SKVDIFGLYLK
Trigger: CTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGATAAGAAGCCCAGAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 72 bp ACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATACGCTGGTACCTGATA +
Preference number: 3 (lower is better)
Translates to: TFRVCSWRLLLV*ILASVIRWYLI
Trigger: TATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CCA 72 bp GGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTACAACTACTTCTTCCTC +
Preference number: 3 (lower is better)
Translates to: GSLPCCVCRLSC*WFFDSYNYFFL
Trigger: GAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAATGTGGATGCTTGTTaGGCAGGCCAGGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: QKMSSLESQYSITSGSMINVDAC*AGQEVW
Trigger: CCACACCTCCTGGCCTGCCAAACAAGCATCCACATT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 3 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 3 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 3 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: VVTFRVCSWRLLLVCILASWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp CGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTaGTCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGA +
Preference number: 3 (lower is better)
Translates to: REHSSQQNFHLL*SLSKCCVVTFR
Trigger: TCTGAAGGTTACAACACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR GCA 72 bp TTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCCTTTGTATATTCGTTT +
Preference number: 3 (lower is better)
Translates to: FSINCCDRCTLD*IRSHHPFVYSF
Trigger: AAACGAATATACAAAGGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR GCA 72 bp TCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGTTACAACTACTTCTTC +
Preference number: 3 (lower is better)
Translates to: SGSLPCCVCRLS*WWFFDSYNYFF
Trigger: GAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR CCA 72 bp TTTGGGGGTCAATTGCATAGACAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAAAGGCATCTCCATGCC +
Preference number: 3 (lower is better)
Translates to: FGGQLHRQSSHI*CNLLGKRHLHA
Trigger: GGCATGGAGATGCCTTTTCCCTAGAAGATTACACCAAATGTGACTTGACTGTCTATGCAATTGACCCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp ACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTG +
Preference number: 3 (lower is better)
Translates to: TQTLLHCIQYSR*RIPPLILQCFL
Trigger: CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CCA 72 bp TCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAACTACTTCTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: SLPCCVCRLSCW*FFDSYNYFFLL
Trigger: GAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
3UTR-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGTATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 3 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 3 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 3 (lower is better)
Translates to: VTFRVCSWRLLLVCILASFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp TTCTTCCACAGGGGCTGGTCCACTTTCTTCTTCTTCTaGGTGTTCTTCTTCTTCCATCTTAGGTTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: FFHRGWSTFFFF*VFFFFHLRFFL
Trigger: CAAAAAGAACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR GCA 72 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCT +
Preference number: 3 (lower is better)
Translates to: SLSKCCVVTFRV*SWRLLLVCILA
Trigger: AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp TGTGAGACTTCCCTAACCTCACCATGTCTTCCATTATaGAATTGTCGTTCTAGATGCATTACTGCTTACTCG +
Preference number: 3 (lower is better)
Translates to: CETSLTSPCLPL*NCRSRCITAYS
Trigger: CGAGTAAGCAGTAATGCATCTAGAACGACAATTTCATAATGGAAGACATGGTGAGGTTAGGGAAGTCTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR GCA 72 bp TTCATAGTAGTCCCTGACTTCTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATTGGATGTGATACGAAA +
Preference number: 3 (lower is better)
Translates to: FIVVPDFSVKLH*CVNAPIGCDTK
Trigger: TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAAGTCAGGGACTACTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 3 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTGGCCAACCTACGGTaGCAATTCTATGACAACTCT +
Preference number: 3 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILANLR*QFYDNS
Trigger: AGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTATTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 3 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 3 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTACATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 3 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp CCAAAGAAAGCGTCTAAGAGTCGCAAAACATTTGGTTaGATCCGTGTACCTAATTCCCATCTTAAGCTTCAT +
Preference number: 3 (lower is better)
Translates to: PKKASKSRKTFG*IRVPNSHLKLH
Trigger: ATGAAGCTTAAGATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTTTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR GCA 72 bp TTATCGCTGTGTAATTTGCAGGCACCAATAGGCATCTaGCCTGAGAATAGATTATTAGCACTTTTTGCCTAT +
Preference number: 3 (lower is better)
Translates to: LSLCNLQAPIGI*PENRLLALFAY
Trigger: ATAGGCAAAAAGTGCTAATAATCTATTCTCAGGGCAGATGCCTATTGGTGCCTGCAAATTACACAGCGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CCA 72 bp CTGCATCCACATGATAGACATGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCCCACATATTCCCACTA +
Preference number: 3 (lower is better)
Translates to: LHPHDRHAFGLS*VSNFHAHIFPL
Trigger: TAGTGGGAATATGTGGGCATGAAAATTAGATACCCAACTTAAACCAAAGGCATGTCTATCATGTGGATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000320301.10
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
3UTR-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGAGTCGCAAAACATTaGGTTGAATCCGTGTACCTA +
Preference number: 3 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRVAKH*VESVYL
Trigger: TAGGTACACGGATTCAACCAAATGTTTTGCGACTCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 3 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395445.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000613657.4
ENST00000615043.1
ENST00000617271.4
3UTR TCA 72 bp AAAGATGGTTTTGGCCAACCTACGGTTGCAATTCTATaGCAACTCTCAGAGTCTGTAATTAATGAGAAAGAC +
Preference number: 3 (lower is better)
Translates to: KDGFGQPTVAIL*QLSESVINEKD
Trigger: GTCTTTCTCATTAATTACAGACTCTGAGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCAAAACCATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACCTCTTACTTCTTTTTaGCCCTTTTGGCTATGGAAA +
Preference number: 3 (lower is better)
Translates to: QKMSSLESQYSITSGSMIPLTSF*PFWLWK
Trigger: TTTCCATAGCCAAAAGGGCAAAAAAGAAGTAAGAGG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCTCTTACTTCTTTTTaGCCCTTTTGGCTATGGAAA +
Preference number: 3 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPLTSF*PFWLWK
Trigger: TTTCCATAGCCAAAAGGGCAAAAAAGAAGTAAGAGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTTAAAAAGATGGTTTaGGCCAACCTACGGTTGCAA +
Preference number: 3 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFKKMV*ANLRLQ
Trigger: TTGCAACCGTAGGTTGGCCAAAACCATCTTTTTAAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR TCA 72 bp AATTCTCTTCAACAAGGACAGTGTATGTTGAATTGGTaGACACAGGACTGTTATCATCAATGTCCAAAACCT +
Preference number: 3 (lower is better)
Translates to: NSLQQGQCMLNW*TQDCYHQCPKP
Trigger: AGGTTTTGGACATTGATGATAACAGTCCTGTGTTCACCAATTCAACATACACTGTCCTTGTTGAAGAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CCA 72 bp TTACTCTTCCAGAATCTTCTTCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTACATCATCTACTCTAT +
Preference number: 3 (lower is better)
Translates to: LLFQNLLPLQKY*QGKETVHHLLY
Trigger: ATAGAGTAGATGATGTACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGGAAGAAGATTCTGGAAGAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGACCAAATATTTGGTTaGGTTGCTCTGTGTAAATTC +
Preference number: 3 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHDQIFG*VALCKF
Trigger: GAATTTACACAGAGCAACCAAACCAAATATTTGGTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATACTGACCAAATATTaGGTTTGGTTGCTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIILTKY*VWLLCV
Trigger: TACACAGAGCAACCAAACCAAATATTTGGTCAGTAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATACTGACCAAATATTaGGTTTGGTTGCTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHILTKY*VWLLCV
Trigger: TACACAGAGCAACCAAACCAAATATTTGGTCAGTAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CCA 72 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGCCATGACACTATAATT +
Preference number: 3 (lower is better)
Translates to: FHYKSFFSLFNW*YYESVGHDTII
Trigger: AATTATAGTGTCATGGCCTACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNACDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGCGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNARSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGACGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGCGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNATPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNALLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATCGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGGATCTCTGGTCTATTTaGAACTTTCCTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRDLWSI*NFPHQP
Trigger: AGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATC...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNASFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNASVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTCGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCACGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAGCCTCCTGGGTAAGCTaGCTGACTGACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRASWVS*LTDSTA
Trigger: GGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGC...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNALYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: GAATGAGAGTAGLAAGNADLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGTTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCCGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGGCCTCCTGGGTAAGCTaGCTGACTGACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQASWVS*LTDSTA
Trigger: GGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGC...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCGGCGACTCCCATATTaGGGCATTTCATACCCATGC +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGRRLPY*GISYPC
Trigger: GCATGGGTATGAAATGCCTCAATATGGGAGTCGCCG...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIREMYAT*LSYHKQ
Trigger: TTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGATTCTGCCTGGTGCCTTaGCACTGCTGCAGATCTATG +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGFCLVP*HCCRSM
Trigger: CATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPSLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCACTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKALQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGGAGTTCCACAGTTCTTaGAACAGTTGGCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTEFHSS*NSWQSG
Trigger: TCCACTTTGCCAACTGTTTCAAGAACTGTGGAACTC...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGATTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCATCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGACTGGTGCCTTGCCACTaGTGCAGATCTATGATCTCT +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRLVPCH*CRSMIS
Trigger: AGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAG...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGCAGCTTTCTGCCTGGTaGCTTGCCACTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQQLSAW*LATAAD
Trigger: ATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTG...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQSLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKAKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCGGGGGCGCTGCCACTaGTGCAGGAGCCGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRGRCH*CRSRHC
Trigger: GCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCCCCG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKARESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCACCAACCACCTCACCATATTCCTCCTGTCCAGCTGGTGGTAACAATCGACGGCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: SPTTSPYSSCPAGGNNRRPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...CCGTCGATTGTTACCACCAGCTGGACAGGAGGAATATGGTGAGGTGGTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR GCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGGCGCTGCCACTGGTaGAGGAGCCGGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGRCHW*RSRHCW
Trigger: CCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATCAGCTTTCTGCCTGGTaGCTTGCCACTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDQLSAW*LATAAD
Trigger: ATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTG...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKAKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATAGAGATGCGCACCTaGCGGAGGCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPIEMRT*RRRRRR
Trigger: CCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 72 bp TCGGAGATTGGCAAGGACCACTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCTTGTCCTGGTCTCATA +
Preference number: 4 (lower is better)
Translates to: SEIGKDHFQGIS*DSKYIACPGLI
Trigger: TATGAGACCAGGACAAGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAAGTGGTCCTTGCCAATCTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCATCATTCTCCACGTTCTaGGATGTATGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSSFSTF*DVCHLP
Trigger: AGGCAGGTGGCATACATCTCAGAACGTGGAGAATGA...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACCAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAGGCATCACAACTTGTTaGTGTTTCCTGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRGITTC*CFLSSE
Trigger: CTCAGAAGACAGGAAACATCAACAAGTTGTGATGCC...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCTTTTAAGTTGTCCGTaGGGCAGGCACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILLSCP*GRHGGF
Trigger: GAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFILRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR TCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCATGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVTFRVCSWRLLLVCILASFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCACCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLSSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVSSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTACGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGTCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLECGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGTCATTTTCAGCTTTCTaGCTGGTGCCTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGSFSAF*LVPCHC
Trigger: GCAGTGGCAAGGCACCAGGCAGAAAGCTGAAAATGA...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCACTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCATATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGSLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRAFGLS*VSNFHA
Trigger: GGCATGAAAATTAGATACCCAACTTAAACCAAAGGC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 72 bp GAAGAGGAGTTGGAAATGGAGGTAGAAGAGGTGGTGTaGGGGGACCAGACGTTGAAACGGAAAGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: EEELEMEVEEVV*GDQTLKRKVEK
Trigger: TTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATTTCCAACTCCTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPICDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGACAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPLLGP*VRKSAR
Trigger: TCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCATCCGTCTACATGAGCTaGCTTGTGAGCCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSSVYMS*LVSLNS
Trigger: ACTATTGAGGCTCACAAGTCAGCTCATGTAGACGGA...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAACTGCTGCAGATCTATaGTCTCTGGTCTATTTGGAA +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRTAADL*SLVYLE
Trigger: TTCCAAATAGACCAGAGATCATAGATCTGCAGCAGT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCATTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKAFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFILMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: NILALFHVVYVGSAAGGFRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAATCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATTCTGCCTGGTGCCTTaGCACTGCTGCAGATCTATG +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPFCLVP*HCCRSM
Trigger: CATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTATTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTDLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCAGATCTATGATCTCTaGTCTATTTGGAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSREKASPCRRAPMDSTTQIYDL*SIWNFP
Trigger: AGGAAAGTTCCAAATAGACCAGAGATCATAGATCTG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATACAGACACACTCTGTaGACAGAAATGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRYRHTL*TEMKLK
Trigger: CTTCAGCTTCATTTCTGTCCACAGAGTGTGTCTGTA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTCTGAGGATGCCTTTTaGTTCTCTCTGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNSEDAF*FSLRVC
Trigger: ACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCATCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFICDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: YLIAPWTSRLTFATTATTFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTAGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGGCATCACAACTTGTTaGTGTTTCCTGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEGITTC*CFLSSE
Trigger: CTCAGAAGACAGGAAACATCAACAAGTTGTGATGCC...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCATTGCTTTGGTGCCTaGAGGAATAAGCCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIHCFGA*RNKPRT
Trigger: AGTCCGGGGCTTATTCCTTCAGGCACCAAAGCAATG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: PPKLILHCPLQGYLELQGPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTACTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAATCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKSSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGTGCCTTGCCACTGCTaGAGATCTATGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASVPCHC*RSMISG
Trigger: ACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCAC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCATTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGATCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGSLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 72 bp ATGGCAGCAGCAGAAATTACACCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACTGGAGGAGGTCTATAT +
Preference number: 4 (lower is better)
Translates to: MAAAEITPTMVP*VASSLTGGGLY
Trigger: ATATAGACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTGCTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CAA 72 bp CTTCCAGGGAATCAGCTTGGACTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCAGAGGTCCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LPGNQLGLEVHS*SWSHNPEVHSH
Trigger: ATGTGAATGGACCTCTGGATTATGAGACCAGGACAAGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CAA 72 bp TCCAATGGACTCCACTACGACCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATCCAAGATCTCTGTAAG +
Preference number: 4 (lower is better)
Translates to: SNGLHYDLGTRN*FLNIAIQDLCK
Trigger: CTTACAGAGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCATTCTCCACGTTCTaGGATGTATGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISFSTF*DVCHLP
Trigger: AGGCAGGTGGCATACATCTCAGAACGTGGAGAATGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTAAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCATTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTATATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCCTCCTGGGTAAGCTaGCTGACTGACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPASWVS*LTDSTA
Trigger: GGCTGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAGATGACATTAGGTTCTaGTTTGAGTTCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKADDIRF*FEFHSS
Trigger: AGAACTGTGGAACTCAAATCAGAACCTAATGTCATC...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTTTTAAGTTGTCCGTaGGGCAGGCACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILLSCP*GRHGGF
Trigger: GAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCAAGGGATGCTGACTaGGATGATCTGGGGGTATCA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISRDAD*DDLGVS
Trigger: TGATACCCCCAGATCATCTCAGTCAGCATCCCTTGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGATAATTCTTATGCATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPPKLILHCPLQGYLELQIILMH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGCATAAGAATTAT...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPICSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCAAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCCCGTGCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPRASL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGCACGGGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437009.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: SAAGGFSIVTTTSSSSLGSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...GCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKANIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCCGGCGAGCTCCAATaGACTCCACTACGACCTTGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAGELQ*TPLRPW
Trigger: CCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCACAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATCTTGGCTTGTATTTTaGGTGAAAATGGGTCTACAA +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRSWLVF*VKMGLQ
Trigger: TTGTAGACCCATTTTCACCCAAAATACAAGCCAAGA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGACAGATCTATGATCTCTaGTCTATTTGGAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: NGGRRGGVGGPDVETESGQIYDL*SIWNFP
Trigger: AGGAAAGTTCCAAATAGACCAGAGATCATAGATCTG...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTTCAGTTGTAAGCAATaGATTGCTGCTACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSFSCKQ*IAATSF
Trigger: AAAAGAGGTAGCAGCAATCCATTGCTTACAACTGAA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCATCTGAGGATGCCTTTTaGTTCTCTCTGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASSEDAF*FSLRVC
Trigger: ACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGA...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTCAGCCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGQPSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGGCTG...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409834.5
3UTR CAA 72 bp GCTTCACTTCTGGGCTTCTTATCCGGTAAGACACATTaGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAA +
Preference number: 4 (lower is better)
Translates to: ASLLGFLSGKTH*LQGRHLWPLFE
Trigger: TTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGATAAGAAGCCCAGAAGTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CAA 72 bp AACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCATACGCTGGTACCTGAT +
Preference number: 4 (lower is better)
Translates to: NLQSLLLATSFG*HSCFCHTLVPD
Trigger: ATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 72 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCTGTCATACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VVTFRVCSWRLL*VCILASVIRWY
Trigger: GTACCAGCGTATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NILALFHVVYVGSAAGGFMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCATCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKASYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATCAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGCAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTGGCTTGTATTTTGGGTaGAAATGGGTCTACAAAATC +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIGLYFG*KWVYKI
Trigger: GATTTTGTAGACCCATTTTCACCCAAAATACAAGCC...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGAAGGGCACATAGTTTaGAGTTCTGAAACATTTGTG +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCEGHIV*SSETFV
Trigger: CACAAATGTTTCAGAACTTCAAACTATGTGCCCTTC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCACATATTTGTTACTTCTaGAGGGCACATAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKAHICYF*RAHSLK
Trigger: CTTCAAACTATGTGCCCTTCAGAAGTAACAAATATG...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCAGGCATTTCATACATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SAAGGFSIVTTTSSSSLGRHFIH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGTATGAAATGCCT...GCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR TCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCGGCGACTCCCATATTaGGGCATTTCATACATTGAG +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSRRLPY*GISYIE
Trigger: CTCAATGTATGAAATGCCTCAATATGGGAGTCGCCG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR TCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTACGGCGACTCCCATATTaGGGCATTTCATACCCATGC +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLRRLPY*GISYPC
Trigger: GCATGGGTATGAAATGCCTCAATATGGGAGTCGCCG...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCACCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCATTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: QRMMMKARANKAPSVYPRWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGGTGTACCCTTGACTaGATCCGGAGCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSRCTLD*IRSHHP
Trigger: GGGATGGTGGCTCCGGATGCAGTCAAGGGTACACCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAATCCTCAAGGCGTCTCTaGCACTCTTCACCCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKSSRRL*HSSPSR
Trigger: CCTTGAGGGTGAAGAGTGGCAGAGACGCCTTGAGGA...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NILALFHVVYVGSAAGGFVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCCAATCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGATTG...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCACTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKALYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCATTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCACTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPINGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCTCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVSLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPITPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCAGAAGGAGAGATGTTTaGTGGATGGGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCRRRDV*WMGKIF
Trigger: GAAAATTTTGCCCATCCACCAAACATCTCTCCTTCT...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTTGTCATTGGTATATaGAGGTTGTTCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIFVIGI*RLFQGP
Trigger: GGGCCCCTGGAACAACCTCCATATACCAATGACAAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTCTCTAATTTCAACCCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSIVTTTSSSSLGSLISTLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...GGTTGAAATTAGAGAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
CDS-3UTR CCA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTACCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTATCTTGTCCATATTCCTaGCCAGGATCAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILSCPYS*PGSIPD
Trigger: GTCTGGAATTGATCCTGGCCAGGAATATGGACAAGA...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPICDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHCDLPI*PFVCVD
Trigger: GTCGACGCAGACGAAGGGTCAAATGGGGAGATCACA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCATGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGAGAAGGAAAAGAATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASEKEKN*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATTCTTTTCCTTCTC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373956.7
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGCTGTTTCTTCTGCCTaGTTGAAGCTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIAVSSA*LKLVLI
Trigger: AATCAGCACTAGCTTCAATCAGGCAGAAGAAACAGC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTCTCTAATTTCAACCCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FSIVTTTSSSSLGSLISTLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...GGTTGAAATTAGAGAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
CDS-3UTR TCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTATCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCCTTCCACCGAAGCTaGTTCTGCACTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHSFHRS*FCTALF
Trigger: GAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAGGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCGGCGACTCCCATATTaGGGCATTTCATACCCATGC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRRLPY*GISYPC
Trigger: GCATGGGTATGAAATGCCTCAATATGGGAGTCGCCG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSSAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTAT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSCLDRE*VSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGGAGTTCCTTCGCTCTaGAGGAGGAGCATTATCCGC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHGVPSL*RRSIIR
Trigger: GCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCACTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTTCACTGTGGCACTaGTGGACATCACAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSSLWH*WTSQAP
Trigger: GGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCGAGTACATCGGCTTTaGCGCTCAGTCCCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRVHRL*RSVPSH
Trigger: ATGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGAAAAGGCATCTCCATaGCGGCGAGCTCCAATGGAC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHEKASP*RRAPMD
Trigger: GTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTATCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGCTTTCTGCCTGGTaGCTTGCCACTGCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQLSAW*LATAAD
Trigger: ATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAATCAGTGTTTCACCTTaGCTTATTTCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSISVSP*LISSFS
Trigger: AGAGAAAGAGGAAATAAGGCAAGGTGAAACACTGAT...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTATCAGTGTTTCACCTTaGCTTATTTCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRISVSP*LISSFS
Trigger: AGAGAAAGAGGAAATAAGGCAAGGTGAAACACTGAT...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCACCTGCTGTTTCTTCTaGCTGATTGAAGCTAGTGCT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPITCCFF*LIEASA
Trigger: AGCACTAGCTTCAATCAGGCAGAAGAAACAGCAGGT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTGGCCAACCTACGGTTaGAATTCTATGACAACTCTC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIWPTYG*NSMTTL
Trigger: GAGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: VVYVGSAAGGFSIVTTTSKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...AGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: RIFTVALLDITGSPSSKAGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: LVCILASVIRWYLIAPWTGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCACTGTGGCACTGCTaGACATCACAGGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSLWHC*TSQAPH
Trigger: ATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGCTGGTCACTGCCTCTaGAGTCCGGATCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHAGHCL*SPDLQN
Trigger: ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAGATCTCTGGTCTATTTaGAACTTTCCTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPDLWSI*NFPHQP
Trigger: AGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATC...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGAGGAGAGATGTTTGGTaGATGGGCAAAATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGRRDVW*MGKIFK
Trigger: TTTGAAAATTTTGCCCATCCACCAAACATCTCTCCT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCATACAGACACACTCTGTaGACAGAAATGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAYRHTL*TEMKLK
Trigger: CTTCAGCTTCATTTCTGTCCACAGAGTGTGTCTGTA...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATGTGGATGCTTGTTTaGCAGGCCAGGAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIMWMLV*QARRCG
Trigger: ACCACACCTCCTGGCCTGCCAAACAAGCATCCACAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATGTGGATGCTTGTTTaGCAGGCCAGGAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIMWMLV*QARRCG
Trigger: ACCACACCTCCTGGCCTGCCAAACAAGCATCCACAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTATACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCAGGAACTCCACTGGGTaGAACATCTTCTATGTCCTT +
Preference number: 4 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTRNSTG*NIFYVL
Trigger: AAGGACATAGAAGATGTTCCACCCAGTGGAGTTCCT...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409834.5
CDS-3UTR CCA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTATCTTGTCCATATTCCTaGCCAGGATCAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILSCPYS*PGSIPD
Trigger: GTCTGGAATTGATCCTGGCCAGGAATATGGACAAGA...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
3UTR CAA 72 bp GTCATAGAGGACTTAATTTTCTCGGCAGGCATCAAGTaGGTCGTGCATTTAACACCTGTTATACAGACACAC +
Preference number: 4 (lower is better)
Translates to: VIEDLIFSAGIK*VVHLTPVIQTH
Trigger: GTGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGAGAAAATTAAGTCCTCTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
3UTR CAA 72 bp ATCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGC +
Preference number: 4 (lower is better)
Translates to: ISFKVLCCNLQS*LLATSFGLHSC
Trigger: GCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCATTCTCCACGTTCTaGGATGTATGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSFSTF*DVCHLP
Trigger: AGGCAGGTGGCATACATCTCAGAACGTGGAGAATGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLQQSL*SACCPP
Trigger: TGGTGGACAACATGCTGATCAAAGGGACTGCTGGAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWWQLDK*VDGNHE
Trigger: CTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGNPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMITCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCGGGTAATGCGGCCTaGATTCGTGCAGTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAGNAA*IRAVFV
Trigger: TACAAAGACTGCACGAATTCAGGCCGCATTACCCGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGGCTTGTATTTTGGGTaGAAATGGGTCTACAAAATC +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASGLYFG*KWVYKI
Trigger: GATTTTGTAGACCCATTTTCACCCAAAATACAAGCC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGATGACATTAGGTTCTaGTTTGAGTTCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASDDIRF*FEFHSS
Trigger: AGAACTGTGGAACTCAAATCAGAACCTAATGTCATC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCATAATTCTTATGCATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELIILMH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGCATAAGAATTAT...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGTTCTCATGCATATaGCCAGCTGCCAACAAAAAC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKFSCI*PAANKN
Trigger: GTTTTTGTTGGCAGCTGGTCATATGCATGAGAACTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAATTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKASAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAACTGTCCGAAATGGTTaGTCCCACTGGGGCAGATTC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSTVRNG*SHWGRF
Trigger: GAATCTGCCCCAGTGGGAGCAACCATTTCGGACAGT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSRSIIR*LDRECV
Trigger: TACGCACTCACGGTCCAAGCAGCGGATAATGCTCCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCTGCCTGGTGCCTTaGCACTGCTGCAGATCTATG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFCLVP*HCCRSM
Trigger: CATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAGATCAACAAGAGGTTTaGCCGACTAAAATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: STLYLTRLAGNPGGSASSDQQEV*PTKIRK
Trigger: TTTTCTTATTTTAGTCGGGCAAACCTCTTGTTGATC...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAAACACACAGAAGGCACTaGACACGAGAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKTHRRH*TREHSS
Trigger: TGATGAGTGCTCTCGTGTGCAGTGCCTTCTGTGTGT...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTCTATGGTGGGGTCTaGTCCTCCAGCAGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFYGGV*SSSSPF
Trigger: AAAGGGACTGCTGGAGGACCAGACCCCACCATAGAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSAIHQL*EARRAL
Trigger: CAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: GAGPLSSSSECSSSSILGSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGGAACTCGGAGATTaGCAAGGACCACTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKELGD*QGPLPG
Trigger: CCCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLSLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTATCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILSLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTCTTGGCTTGTATTTTaGGTGAAAATGGGTCTACAA +
Preference number: 4 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDSWLVF*VKMGLQ
Trigger: TTGTAGACCCATTTTCACCCAAAATACAAGCCAAGA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCTGAATCTTTTCTCTTaGGCCCCTCAGAGACTTACT +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGLNLFS*APQRLT
Trigger: AGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCTTACTGTCAATCATaGACTCCTGTTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISYCQS*TPVQLC
Trigger: GCACAGTTGAACAGGAGTCCATGATTGACAGTAAGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTTCTGATTCAGGGGTaGAACTCTCCTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLLIQG*NSPPPQ
Trigger: CTGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGCTTCTGTCATACGCTaGTACCTGATAGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHASVIR*YLIAPW
Trigger: CCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
3UTR CAA 72 bp GGTAACCAAAGAAAGCGTCTAAGAGTCGCAAAACATTaGGTTGAATCCGTGTACCTAATTCCCATCTTAAGC +
Preference number: 4 (lower is better)
Translates to: GNQRKRLRVAKH*VESVYLIPILS
Trigger: GCTTAAGATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTTTCTTTGGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCATTCTCCACGTTCTaGGATGTATGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSFSTF*DVCHLP
Trigger: AGGCAGGTGGCATACATCTCAGAACGTGGAGAATGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCATTCTCCACGTTCTaGGATGTATGCCACCTGCCT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSFSTF*DVCHLP
Trigger: AGGCAGGTGGCATACATCTCAGAACGTGGAGAATGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWRESPG*SLKLNM
Trigger: CATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGGTACCAACTGGAGTaGGCTCATTCACTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHWYQLE*AHSLWH
Trigger: ATGCCACAGTGAATGAGCTCACTCCAGTTGGTACCA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWDSWPI*WRLNIP
Trigger: CGGAATATTCAACCGCCATCAGATAGGCCAGGAATC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAAGGCAGGAAGAGGATaGCCATTGTCTTGTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWKAGRG*PLSCSA
Trigger: GGCTGAACAAGACAATGGTCATCCTCTTCCTGCCTT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAAAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: VVTFRVCSWRLLLVCILACMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTACCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATATTCCTCCTGTGTaGAGCGTGGGATCTCACCAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYIPPV*SVGSHQ
Trigger: CTGGTGAGATCCCACGCTTCACACAGGAGGAATATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCATATCCAGCTGATTaGCCACGGAGACGAGTACAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAYPAD*PRRRVH
Trigger: ATGTACTCGTCTCCGTGGTCAATCAGCTGGATATGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACTTGCATATCCAGCTaGTTGACCACGGAGACGAGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTCISS*LTTETS
Trigger: ACTCGTCTCCGTGGTCAATCAGCTGGATATGCAAGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTGAAGGGCACATAGTTTaGAGTTCTGAAACATTTGTG +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSEGHIV*SSETFV
Trigger: CACAAATGTTTCAGAACTTCAAACTATGTGCCCTTC...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACGGCGACTCCCATATTaGGGCATTTCATACTTATGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRRLPY*GISYLC
Trigger: GCATAAGTATGAAATGCCTCAATATGGGAGTCGCCG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373965.6
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCAGAGGGTGTCTCTaGCTCAGATTCCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLRGCL*LRFLFC
Trigger: ACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGGATTCCGATTCTTCTaGTTCAGGGGTGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWGFRFF*FRGGTL
Trigger: GAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTATGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCATGGACCTCCAGACTaGCTTTCGCTACTACTGCTA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHHGPPD*LSLLLL
Trigger: TAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGACGTTGTCTGTAGCTaGCCAAAACCACCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDVVCS*PKPPRW
Trigger: CCATCTTGGTGGTTTTGGTCAGCTACAGACAACGTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395430.5
ENST00000395433.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWCSKFS*QGCLLH
Trigger: GTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GCACACGAGAGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAATGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: AHESTHHSKTSTYCDLFQWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...TTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCTCTCGTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTCGTCTGCGTCGACTaGAGTGAGCTGTATGACACT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFVCVD*SELYDT
Trigger: AGTGTCATACAGCTCACTGCAGTCGACGCAGACGAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTATGACGAGGGTGTACTaGTCCATCTGTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSMTRVY*SICCHN
Trigger: GTTGTGGCAACAGATGGAGCAGTACACCCTCGTCAT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCACCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTATCCGGATCTCCAGAATaGGTCCTCCTTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVSGSPE*VLLPHN
Trigger: ATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGA...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTAATGCTGGTCACTaGCTCTGGAGTCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFNAGH*LWSPDL
Trigger: GAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGCGGCCTGAATTCGTaGAGTCTTTGTACACTCAGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCGLNS*SLCTLS
Trigger: GCTGAGTGTACAAAGACTGCACGAATTCAGGCCGCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTGCCTTGCCACTGCTaGAGATCTATGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVPCHC*RSMISG
Trigger: ACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGTGCCTTGCCACTGCTaGAGATCTATGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMVPCHC*RSMISG
Trigger: ACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCAC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTGGTGCCTTGCCACTaGTGCAGATCTATGATCTCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLVPCH*CRSMIS
Trigger: AGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCATTTTCAGCTTTCTaGCTGGTGCCTTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSFSAF*LVPCHC
Trigger: GCAGTGGCAAGGCACCAGGCAGAAAGCTGAAAATGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAAGAAGGAAAAGATTATaGATTGAGCTGTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASRRKRL*IELSPS
Trigger: ACTTGGAGACAGCTCAATGCATAATCTTTTCCTTCT...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGCATTTCATACTTATaGATTGAGCTGTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGISYL*IELSPS
Trigger: ACTTGGAGACAGCTCAATGCATAAGTATGAAATGCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373965.6
CDS-3UTR GCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: NILALFHVVYVGSAAGGFRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTACGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: TGAGPLSSSSECSSSSILRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAAGAAAGTTCTATGGTaGGGTCTGGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHKKVLW*GLVLQQ
Trigger: CTGCTGGAGGACCAGACCCCACCATAGAACTTTCTT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGGACCTGCACCACAATaGAGTGTATGTTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWGPAPQ*SVCSSV
Trigger: CACCGATGAACATACACTCCATTGTGGTGCAGGTCC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVINGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATATCATTTCCACCCCTaGAGCGATGGTGATAAGCCC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSYHFHP*SDGDKP
Trigger: GGGCTTATCACCATCGCTCCAGGGGTGGAAATGATA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGACCCACAAAGGCATTaGCTTCTTCTTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSDPQRH*LLLPPQ
Trigger: CTGTGGTGGAAGAAGAAGCCAATGCCTTTGTGGGTC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGCCATGGTCCCTTTGGTaGCAAGTTCACTTACTGGAG +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMPWSLW*QVHLLE
Trigger: CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGG...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCATTCAGTTGTAAGCAATaGATTGCTGCTACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASFSCKQ*IAATSF
Trigger: AAAAGAGGTAGCAGCAATCCATTGCTTACAACTGAA...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAGATTAAACATACCTaGGTATTTCCTCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKIKHT*VFPLGS
Trigger: GGAACCCAGAGGAAATACCCAGGTATGTTTAATCTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTATGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTACCTGATAGCCCCATaGACCTCCAGACTGACTTTC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWYLIAP*TSRLTF
Trigger: GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAATGATGAAGTCTCCCTaGGCCCCAACAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSMMKSP*APTRIS
Trigger: TGAAATCCTTGTTGGGGCTCAGGGAGACTTCATCAT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHKRGGL*LFGGST
Trigger: AGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAAGGTTAGAGTTGAATaGCGAGGGTGTACTGCTCCA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSKVRVE*RGCTAP
Trigger: TGGAGCAGTACACCCTCGTCATTCAACTCTAACCTT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCCGTCTACATGAGCTaGCTTGTGAGCCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSVYMS*LVSLNS
Trigger: ACTATTGAGGCTCACAAGTCAGCTCATGTAGACGGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTATCCGTCTACATGAGCTaGCTTGTGAGCCTCAATAGT +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVSVYMS*LVSLNS
Trigger: ACTATTGAGGCTCACAAGTCAGCTCATGTAGACGGA...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAGAAAAGATTATGCATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKEKIMH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGCATAATCTTTTC...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448885.5
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGATCAACAACTAACTTaGTCATTCTTTTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIDQQLT*SFFFLP
Trigger: GGGCAAGAAAAAGAATGATCAAGTTAGTTGTTGATC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTAGTGACATTAATGTaGGACTTCCCTAACCTCACC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILVTLM*DFPNLT
Trigger: GGTGAGGTTAGGGAAGTCTCACATTAATGTCACTAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTAGTGACATTAATGTaGGACTTCCCTAACCTCACC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILVTLM*DFPNLT
Trigger: GGTGAGGTTAGGGAAGTCTCACATTAATGTCACTAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCTGTTTCTTCTGCCTaGTTGAAGCTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIAVSSA*LKLVLI
Trigger: AATCAGCACTAGCTTCAATCAGGCAGAAGAAACAGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTTAATGGTAACTACTaGATCACCTTTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIFNGNY*ITFGTT
Trigger: GGTTGTTCCAAAGGTGATTCAGTAGTTACCATTAAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGGAGGATTCCTCCTCTaGTTCTACAGTGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWGGFLL*FYSAFC
Trigger: ACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTCTTCAGGGATATCTTaGGCTTCAGGGTCTGTACTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFSSGIS*ASGSVL
Trigger: AAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEMYAT*LSYHKQ
Trigger: TTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFEMYAT*LSYHKQ
Trigger: TTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTGATGCACTGGACCTaGACCACAATGGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLMHWT*TTMECM
Trigger: CATACACTCCATTGTGGTGCAGGTCCAGTGCATCAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCATTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTTGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: VTFRVCSWRLLLVCILASWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGAATGTAGCGATCAGTaGTTTCCCTGTCCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSECSDQ*FPCPVL
Trigger: AAGCACTGGACAGGGAAAGCACTGATCGCTACATTC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCATTTCTCTGTCAAATTTaGCTCTTCAGTTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SKASTRKVILASWSGNASFLCQI*LFSCKQ
Trigger: TTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAA...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAATTGTCGTTCTAGATaGATTACTGCTTACTCGAAC +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPINCRSR*ITAYSN
Trigger: GTTCGAGTAAGCAGTAATGCATCTAGAACGACAATT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCGATTAGCCAAGACCTaGTGTTTCTTCTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRLAKT*CFFCLI
Trigger: AATCAGGCAGAAGAAACAGCAGGTCTTGGCTAATCG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACGATTAGCCAAGACCTaGTGTTTCTTCTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRLAKT*CFFCLI
Trigger: AATCAGGCAGAAGAAACAGCAGGTCTTGGCTAATCG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGGCCAACCTACGGTTaGAATTCTATGACAACTCTC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHWPTYG*NSMTTL
Trigger: GAGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAATTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAACTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVAITSV*HKDTRK
Trigger: CTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGC...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAATGGTTGCTCCCACTaGGGCAGATTCCAGGATATA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHNGCSH*GRFQDI
Trigger: TATATCCTGGAATCTGCCCCAGTGGGAGCAACCATT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: NILALFHVVYVGSAAGGFKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATATACACAGTGCAGATaGAGTTCCTTCGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSYTQCR*SSFALQ
Trigger: CTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCACTATGTTTACTGTaGCAGTTGAGGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPLCLL*QLRSHL
Trigger: CAGATGGGACCTCAACTGCCACAGTAAACATAGTGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCAACCATGGTCCCTTTaGTGGCAAGTTCACTTACTG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHQPWSL*WQVHLL
Trigger: CAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIDLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACTCCACTACGACCTTaGCACCAGGAATTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTPLRP*HQEFVP
Trigger: AGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCTCATTTCTATCGATaGCTCTGTTGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAHFYR*LCWFGG
Trigger: ACCCCCAAACCAACAGAGCCATCGATAGAAATGAGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTGAGGATGCCTTTTaGTTCTCTCTGAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSEDAF*FSLRVC
Trigger: ACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTAAAAAGATGGTTTTaGCCAACCTACGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILKRWF*PTYGCN
Trigger: ATTGCAACCGTAGGTTGGCCAAAACCATCTTTTTAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTATCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTCTTCCACAGGGGCTaGTCCACTTTCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHFFHRG*STFFFF
Trigger: GAAGAAGAAGAAAGTGGACCAGCCCCTGTGGAAGAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCCTGGCGACTTCTTTTaGTTTGCATTCTTGCTTCTG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPPGDFF*FAFLLL
Trigger: CAGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCTTGTCCATATTCCTaGCCAGGATCAATTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSCPYS*PGSIPD
Trigger: GTCTGGAATTGATCCTGGCCAGGAATATGGACAAGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHMLESG*VVIPVS
Trigger: AGAGACAGGAATGACAACTCACCCACTTTCAAGCAT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSCDGED*GVVIQK
Trigger: TTTCTGAATGACTACACCTCAGTCTTCACCGTCACA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGCAATGTCCAAAACCTTaGTGGCCAAGGTTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMQCPKP*WPRLEL
Trigger: CAACTCTAACCTTGGCCATCAAGGTTTTGGACATTG...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTACCTCTACCAGAAAAGTaGTACTTGCTTCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVPLPEK*YLLLGL
Trigger: CAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGG...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGCATCACAACTTGTTaGTGTTTCCTGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGITTC*CFLSSE
Trigger: CTCAGAAGACAGGAAACATCAACAAGTTGTGATGCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAGTTCCACAGTTCTTaGAACAGTTGGCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEFHSS*NSWQSG
Trigger: TCCACTTTGCCAACTGTTTCAAGAACTGTGGAACTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGAGTTCCACAGTTCTTaGAACAGTTGGCAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMEFHSS*NSWQSG
Trigger: TCCACTTTGCCAACTGTTTCAAGAACTGTGGAACTC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAAAAGCAACATTACAGTaGAGTAGATTGACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKKATLQ*SRLTVR
Trigger: TCTCACAGTCAATCTACTTCACTGTAATGTTGCTTT...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKAPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGCTTTTTCTCCTTCTaGCTCTGTGGATTCCGATTC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHCFFSF*LCGFRF
Trigger: GAATCGGAATCCACAGAGTCAGAAGGAGAAAAAGCA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEMYAT*LSYHKQ
Trigger: TTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHEMYAT*LSYHKQ
Trigger: TTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFSCQG*LLHIPL
Trigger: TAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp GGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTCTCTAATTTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: GGFSIVTTTSSSSLGSLIFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...AATTAGAGAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCCAGAACTCTTCCGGTaGTGTTCAGGAAAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHPELFR*CSGKAF
Trigger: AAATGCTTTTCCTGAACAGCACCGGAAGAGTTCTGG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCTGCTGTCCTAGGATaGATATGGAAAAATCGTGGG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSAVLG*IWKNRG
Trigger: CCCACGATTTTTCCATATGCATCCTAGGACAGCAGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHQETKF*CPRMHM
Trigger: CATATGCATCCTAGGACAGCAGAACTTAGTCTCCTG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCCGGTAAGACACATTTaGTCCAAGGTCGACATCTTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHPVRHI*SKVDIF
Trigger: AAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGTTTGGGGGTCAATTaGATAGACAGTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGLGVN*IDSQVT
Trigger: TGTGACTTGACTGTCTATGCAATTGACCCCCAAACC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACTCCTGTTCAACTGTaGTTTTCAGCCTGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMITPVQL*FSACSL
Trigger: TAAGGAACAGGCTGAAAAGCACAGTTGAACAGGAGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACTCCTGTTCAACTGTaGTTTTCAGCCTGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTPVQL*FSACSL
Trigger: TAAGGAACAGGCTGAAAAGCACAGTTGAACAGGAGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGCCCCGGACTTCATTaGTTCCAAAATTTAATGTGC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSPGLH*FQNLMC
Trigger: GCACATTAAATTTTGGAAGCAATGAAGTCCGGGGCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGTATGTAGGCTCAGCTaGTGGTGGTTTTTCGATAGT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHVCRLS*WWFFDS
Trigger: ACTATCGAAAAACCACCAGCAGCTGAGCCTACATAC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAAGCTGATTCTGCACTaGCCTCTTCAGGGATATCTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHKLILH*PLQGYL
Trigger: AAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGTAACCTTCAGAGTTTaGTCCTGGCGACTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWVTFRV*SWRLLL
Trigger: CAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTAAAGAAAGTTCTATaGTGGGGTCTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLKKVL*WGLVLQ
Trigger: CTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCTCATTCAGATTTTaGGCACGGTCATTAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLSFRF*ARSLAW
Trigger: CCAAGCTAATGACCGTGCCCAAAATCTGAATGAGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSLISE*TAITSV
Trigger: AACACTCGTGATTGCCGTCCACTCACTTATCAAGCT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMINGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTACAAGGTCGACATCTTTaGCCTCTATTTGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVQGRHL*PLFEGW
Trigger: CCATCCTTCAAATAGAGGCCAAAGATGTCGACCTTG...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGCAAGTTCACTTACTaGAGGAGGTCTATATTCCTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGKFTY*RRSIFL
Trigger: GAGGAATATAGACCTCCTCCAGTAAGTGAACTTGCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTACATAGCTTGTCCTaGTCTCATAATCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVHSLS*SHNPEV
Trigger: GACCTCTGGATTATGAGACCAGGACAAGCTATGTAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKADLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATCGATGGCTCTGTTaGTTTGGGGGTCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYRWLC*FGGQLH
Trigger: ATGCAATTGACCCCCAAACCAACAGAGCCATCGATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTGAATCTTTTCTCTTaGGCCCCTCAGAGACTTACT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLNLFS*APQRLT
Trigger: AGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAAGGAGAGATGTTTGGTaGATGGGCAAAATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKRRDVW*MGKIFK
Trigger: TTTGAAAATTTTGCCCATCCACCAAACATCTCTCCT...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGAFGLS*VSNFHA
Trigger: GGCATGAAAATTAGATACCCAACTTAAACCAAAGGC...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTTCTCCAGTTGAGCTaGTTTCATACTCTCGATCAA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILLQLS*FHTLDQ
Trigger: TTGATCGAGAGTATGAAACCAGCTCAACTGGAGAAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTTCTCCAGTTGAGCTaGTTTCATACTCTCGATCAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILLQLS*FHTLDQ
Trigger: TTGATCGAGAGTATGAAACCAGCTCAACTGGAGAAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCTTACTGTCAATCATaGACTCCTGTTCAACTGTGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISYCQS*TPVQLC
Trigger: GCACAGTTGAACAGGAGTCCATGATTGACAGTAAGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAGGCAATGATTTCCTaGTTCTGGATTTTAGGCACA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQAMIS*FWILGT
Trigger: TGTGCCTAAAATCCAGAACCAGGAAATCATTGCCTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAGGCTCAGCTGCTGGTaGTTTTTCGATAGTTACAAC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWRLSCW*FFDSYN
Trigger: GTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTGTAGGCTCAGCTGCTaGTGGTTTTTCGATAGTTAC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWCRLSC*WFFDSY
Trigger: GTAACTATCGAAAAACCACCAGCAGCTGAGCCTACA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAACTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTCAGAGTTTGCTCCTaGCGACTTCTTTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFRVCS*RLLLVC
Trigger: GCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAAAAGGTGAAGCTCTaGGTCTTTTGTAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKKVKL*VFCRNS
Trigger: GGAGTTCCTACAAAAGACCCAGAGCTTCACCTTTTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409834.5
3UTR CAA 72 bp TTTAAAAAGCTCATTTCTATCGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGACAGTCAAGTCACATTT +
Preference number: 4 (lower is better)
Translates to: FKKLISIDGSVG*GVNCIDSQVTF
Trigger: AAATGTGACTTGACTGTCTATGCAATTGACCCCCAAACCAACAGAGCCATCGATAGAAATGAGCTTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAGTAGCTTTCATGCTTaGAAGTGGGTGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSSFHA*KWVSCH
Trigger: ATGACAACTCACCCACTTTCAAGCATGAAAGCTACT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCCTGAAAATCCTGTaGATATTGTGGTACCAACTG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLLKIL*ILWYQL
Trigger: CAGTTGGTACCACAATATTCACAGGATTTTCAGGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGTTTGCATCCATCACTTaGATATTGACGATGACTGGC +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMFASIT*ILTMTG
Trigger: GCCAGTCATCGTCAATATTCAAGTGATGGATGCAAA...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCAAGGATTTCATATGTaGTCTCCCCATTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHQGFHM*SPHLTL
Trigger: AAGGGTCAAATGGGGAGATCACATATGAAATCCTTG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAATGGCATATGTTATTaGGTCTCCCTCTCGATCAGT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSNGICY*VSLSIS
Trigger: ACTGATCGAGAGGGAGACTCAATAACATATGCCATT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVINPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPNPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAAGGACAGTGTATGTTaGATTGGTGAACACAGGACT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSKDSVC*IGEHRT
Trigger: AGTCCTGTGTTCACCAATTCAACATACACTGTCCTT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCACATTGGAAACAATaGCTTGCATATCCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAHWKQ*LAYPAD
Trigger: ATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAGAAGGAAAAGAATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEKEKN*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATTCTTTTCCTTCTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000395430.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACTGCTGCAGATCTATaGTCTCTGGTCTATTTGGAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTAADL*SLVYLE
Trigger: TTCCAAATAGACCAGAGATCATAGATCTGCAGCAGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCATATTTGTTACTTCTaGAGGGCACATAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFHICYF*RAHSLK
Trigger: CTTCAAACTATGTGCCCTTCAGAAGTAACAAATATG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTCATACTTATGCATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFILMH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGCATAAGTATGAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373965.6
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATTCCAAAGCCTCCTTaGTGTTCTTACTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIIPKPP*CSYCQS
Trigger: TGATTGACAGTAAGAACATCAAGGAGGCTTTGGAAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATTCCAAAGCCTCCTTaGTGTTCTTACTGTCAATCA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHIPKPP*CSYCQS
Trigger: TGATTGACAGTAAGAACATCAAGGAGGCTTTGGAAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAAGCTAGTGCTGATTaGGAACAACAAGAAAACCTT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEASAD*EQQENL
Trigger: AAGGTTTTCTTGTTGTTCTCAATCAGCACTAGCTTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACAAAAACTCCAAATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMITKTPN*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATTTGGAGTTTTTGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR GCA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTACTTCAATATACACAGTaGAGATGGAGTTCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVLQYTQ*RWSSFA
Trigger: AGCGAAGGAACTCCATCTGCACTGTGTATATTGAAG...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGCATCAGGGTCTGTTaGTTTTACTTGACCCACAAA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSSIRVC*FYLTHK
Trigger: TTTGTGGGTCAAGTAAAAGCAACAGACCCTGATGCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAATTTCTCTGTCAAATTTaGCTCTTCAGTTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKFLCQI*LFSCKQ
Trigger: TTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAA...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGGCCACTAGACTTCTaGCAACATCATATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRPLDF*QHHISK
Trigger: TTTGGAAATATGATGTTGGCAGAAGTCTAGTGGCCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGGCCACTAGACTTCTaGCAACATCATATTTCCAAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRPLDF*QHHISK
Trigger: TTTGGAAATATGATGTTGGCAGAAGTCTAGTGGCCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTACTTACAGGAGGGTCTaGATCTTCAGCATAAACTGT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSTYRRV*IFSINC
Trigger: ACAGTTTATGCTGAAGATGCAGACCCTCCTGTAAGT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCATGGGCCTTCTTCTTaGAAGCACAATGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHHGPSS*KHNVFP
Trigger: AGGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCAATCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGATTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCAATCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGATTG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTATTGTGGTACCAACTaGAGTGAGCTCATTCACTGT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWYCGTN*SELIHC
Trigger: ACAGTGAATGAGCTCACTCCAGTTGGTACCACAATA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACACAAGGAAGAAACATTaGACCCAAGTCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHTRKKH*TQVISI
Trigger: GATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHNGLDW*RNNNGV
Trigger: AACCCCATTATTGTTACGCCACCAATCCAAGCCATT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGATCAATGGCTTGGATTaGTGGCGTAACAATAATGGG +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWINGLD*WRNNNG
Trigger: CCCATTATTGTTACGCCACCAATCCAAGCCATTGAT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVINIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAATTACACCAACCATaGTCCCTTTGGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKLHQP*SLWWQV
Trigger: AACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLDLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATCTCTGGTCTATTTaGAACTTTCCTCATCAGCCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDLWSI*NFPHQP
Trigger: AGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTACAGACACACTCTGTaGACAGAAATGAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYRHTL*TEMKLK
Trigger: CTTCAGCTTCATTTCTGTCCACAGAGTGTGTCTGTA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACATACGACTTCAAGTaGTTTCCTAAAGGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTYDFK*FPKGSR
Trigger: TCTTGACCCTTTAGGAAACCACTTGAAGTCGTATGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTACATACGACTTCAAGTaGTTTCCTAAAGGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVITYDFK*FPKGSR
Trigger: TCTTGACCCTTTAGGAAACCACTTGAAGTCGTATGT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGTCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGACTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373957.7
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCATGGGGAATATTCTaGCTCTCTTCCATGTTGTGT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHSWGIF*LSSMLC
Trigger: ACACAACATGGAAGAGAGCCAGAATATTCCCCATGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGATTCAGTATAGTCGCTaGAGGATTCCTCCTCTGATT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWIQYSR*RIPPLI
Trigger: AATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTCCTTCTGACTCTGTaGATTCCGATTCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLLLTL*IPILLI
Trigger: AATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTACCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVPSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGGTAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395433.5
CDS-3UTR TCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCATTCAGAAAAAGGTaGAGCTCTGGGTCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSFRKR*SSGSFV
Trigger: TACAAAAGACCCAGAGCTTCACCTTTTTCTGAATGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPNPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSNPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAATCCCCGTGGTTTCTaGAAGATTAAAAACTCTCTG +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHNPRGF*KIKNSL
Trigger: CAGAGAGTTTTTAATCTTTCAGAAACCACGGGGATT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAGAGTACACAATACTTTaGTTAATGGCAGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVEYTIL*LMAAAE
Trigger: TTCTGCTGCTGCCATTAATCAAAGTATTGTGTACTC...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGCTTGTATTTTGGGTaGAAATGGGTCTACAAAATC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGLYFG*KWVYKI
Trigger: GATTTTGTAGACCCATTTTCACCCAAAATACAAGCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATGACATTAGGTTCTaGTTTGAGTTCCACAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDDIRF*FEFHSS
Trigger: AGAACTGTGGAACTCAAATCAGAACCTAATGTCATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAAGGGCACATAGTTTaGAGTTCTGAAACATTTGTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEGHIV*SSETFV
Trigger: CACAAATGTTTCAGAACTTCAAACTATGTGCCCTTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAAAAGATTATGCATTaGGCTGTCTCCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEKIMH*AVSKFF
Trigger: GAAGAACTTGGAGACAGCTCAATGCATAATCTTTTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGATCAACAACTAACTTaGTCATTCTTTTTCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHDQQLT*SFFFLP
Trigger: GGGCAAGAAAAAGAATGATCAAGTTAGTTGTTGATC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAAATTCCTTTACTCTaGTATGCTGGGTTTACAAAC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQIPLL*YAGFTN
Trigger: GTTTGTAAACCCAGCATATCAGAGTAAAGGAATTTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCACCTTAGGATCTTTTaGAAATGTGGATGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHHLRIF*KCGCLF
Trigger: AAACAAGCATCCACATTTTCAAAAGATCCTAAGGTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTTAATGGTAACTACTaGATCACCTTTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFNGNY*ITFGTT
Trigger: GGTTGTTCCAAAGGTGATTCAGTAGTTACCATTAAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAAGAAAAGGAGCTTCTaGATTAAAGCCCACCACTTT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSKKRSF*IKAHHF
Trigger: AAAGTGGTGGGCTTTAATTCAGAAGCTCCTTTTCTT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR TCA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAACCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATCTGTTAAGCTTCACTaGTGTGTAAATGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSVKLH*CVNAPI
Trigger: AATGGGAGCATTTACACAGCAGTGAAGCTTAACAGA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTACTGCTCCATCTGTTaGCACAACAACAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSYCSIC*HNNKFI
Trigger: TATGAACTTGTTGTTGTGGCAACAGATGGAGCAGTA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAGAAAAGTGATACTTaGTTCTTGGTCTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQKSDT*FLVWKC
Trigger: GCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGCAATCCTCATATTaGCAGTCATCATCATACTGG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLQSSY*QSSSYW
Trigger: CCAGTATGATGATGACTGGCAATATGAGGATTGCAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373957.7
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTTGCATTCTTaGTTCTGTCATACGCTGGTA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHFGLHS*FCHTLV
Trigger: TACCAGCGTATGACAGAAGCAAGAATGCAAACCAAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATGCATATGACCAGCTaGCAACAAAAACTCCAAATT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHMHMTS*QQKLQI
Trigger: AATTTGGAGTTTTTGTTGGCAGCTGGTCATATGCAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAATCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGATTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000395430.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAATCATCATCATACTaGCCCAAGCAGATTTCAAAG +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQSSSY*PKQISK
Trigger: CTTTGAAATCTGCTTGGGCCAGTATGATGATGATTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTTCAAAGGTGTCATTaGATGTCGGATCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFQRCH*MSDHLD
Trigger: ATCCAGATGATCCGACATCCAATGACACCTTTGAAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAATATTGACGATGACTaGCTCACTTTCTTGTACACC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWNIDDD*LTFLYT
Trigger: GGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHYFREG*RVIICI
Trigger: GATGCAAATGATAACACGCCAACCTTCCCTGAAATA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMISSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCACTTCAAAAATACTaGCAGGGTAAGGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLQKY*QGKETV
Trigger: TACAGTTTCCTTACCCTGCCAGTATTTTTGAAGTGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCCCTCTTTAATTGGTaGTATTATGAGTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSLFNW*YYESVG
Trigger: GCCTACAGACTCATAATACCACCAATTAAAGAGGGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAAGGAGAGATGTTTaGTGGATGGGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRRRDV*WMGKIF
Trigger: GAAAATTTTGCCCATCCACCAAACATCTCTCCTTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGAGAAGGAGAGATGTTTaGTGGATGGGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMRRRDV*WMGKIF
Trigger: GAAAATTTTGCCCATCCACCAAACATCTCTCCTTCT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTGACTGAGATGATCTaGGGGTATCAAGATAATATT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLTEMI*GYQDNI
Trigger: AATATTATCTTGATACCCCCAGATCATCTCAGTCAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCTTATCTTCATAGTTaGGCCTCTTCCTTAACACTA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSYLHS*ASSLTL
Trigger: TAGTGTTAAGGAAGAGGCTCAACTATGAAGATAAGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGC +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHKSNFW*KSLFTG
Trigger: GCCAGTAAACAGAGACTTTCACCAGAAATTTGATTT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGTATGTTGAATTGGTaGACACAGGACTGTTATCAT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSCMLNW*TQDCYH
Trigger: ATGATAACAGTCCTGTGTTCACCAATTCAACATACA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCATATTTGTTACTTCTaGAGGGCACATAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPHICYF*RAHSLK
Trigger: CTTCAAACTATGTGCCCTTCAGAAGTAACAAATATG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAAGCAACATTACAGTaGAGTAGATTGACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKATLQ*SRLTVR
Trigger: TCTCACAGTCAATCTACTTCACTGTAATGTTGCTTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR TCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGAAAGCAACATTACAGTaGAGTAGATTGACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMKATLQ*SRLTVR
Trigger: TCTCACAGTCAATCTACTTCACTGTAATGTTGCTTT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR TCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCTCTTGGTCCAGAGTaGGTTTCAAATAATCTTTAT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPLGPE*VSNNLY
Trigger: ATAAAGATTATTTGAAACTCACTCTGGACCAAGAGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGTCCATGTAAGATTATaGAGCAAGTTTTCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSVHVRL*SKFSCQ
Trigger: TTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTCAGGAAAAGCATTTaGTTAACAGGATCCATCAAC +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFRKSI*LTGSIN
Trigger: GTTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMILYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR GCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAAGTAAACATTCTTaGATCTTCAGATACACCTCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRSKHS*IFRYTS
Trigger: GGAGGTGTATCTGAAGATGCAAGAATGTTTACTTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGCCCATAGTCGTCAGTTaGAATAACTTGAAACTTGAA +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMPIVVS*NNLKLE
Trigger: TTCAAGTTTCAAGTTATTGCAACTGACGACTATGGG...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATCAGTGTTTCACCTTaGCTTATTTCCTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPISVSP*LISSFS
Trigger: AGAGAAAGAGGAAATAAGGCAAGGTGAAACACTGAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAAGGAAAAGATTATaGATTGAGCTGTCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRRKRL*IELSPS
Trigger: ACTTGGAGACAGCTCAATGCATAATCTTTTCCTTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCGACTTCTTTTGGTTTaGATTCTTGCTTCTGTCATA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWRLLLV*ILASVI
Trigger: TATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTCTATCTGTCCATTTaGTCCATCATCTATATCTGT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLYLSI*SIIYIC
Trigger: ACAGATATAGATGATGGACCAAATGGACAGATAGAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: GMLLIISHIKILINFLPFGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: QKMSSLESQYSITSGSMIALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CCA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGATCTCCATTCTCAATaGCATATGTTATTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSDLHSQ*HMLLSL
Trigger: GAGACTCAATAACATATGCCATTGAGAATGGAGATC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAGTAGCAATACCAGGTaGCATTGTTCCATAAATATC +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSSNTR*HCSINI
Trigger: GATATTTATGGAACAATGCCACCTGGTATTGCTACT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATCTCCTCATATTATaGAAGAGCATAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDLLIL*KSIAVL
Trigger: CAAAACTGCTATGCTCTTCCATAATATGAGGAGATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGTCAAGTCACATTTaGTGTAATCTTCTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQSSHI*CNLLGK
Trigger: TTTCCCTAGAAGATTACACCAAATGTGACTTGACTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCTTGGCTTGTATTTTaGGTGAAAATGGGTCTACAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSWLVF*VKMGLQ
Trigger: TTGTAGACCCATTTTCACCCAAAATACAAGCCAAGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGATCTATGATCTCTaGTCTATTTGGAACTTTCCT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQIYDL*SIWNFP
Trigger: AGGAAAGTTCCAAATAGACCAGAGATCATAGATCTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCAGTTGTAAGCAATaGATTGCTGCTACCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFSCKQ*IAATSF
Trigger: AAAAGAGGTAGCAGCAATCCATTGCTTACAACTGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGGAGAGATGTTTGGTaGATGGGCAAAATTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRRDVW*MGKIFK
Trigger: TTTGAAAATTTTGCCCATCCACCAAACATCTCTCCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCCTTTGGTTTAAGTTaGGTATCTAATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPAFGLS*VSNFHA
Trigger: GGCATGAAAATTAGATACCCAACTTAAACCAAAGGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTACTGAATCACCTTTaGAACAACCACTTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLLNHL*NNHLSK
Trigger: TTTACTTAAGTGGTTGTTCCAAAGGTGATTCAGTAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
3UTR CAA 72 bp AAAAAGATTATTAAAGTTACCCAAACTGTAGTGCACTaGACCATTTATTCCAGCATCAGGGTCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KKIIKVTQTVVH*TIYSSIRVCCF
Trigger: AAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACTACAGTTTGGGTAACTTTAATAATCTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCACTCAAAGCTGATTTaGGGTTTAAAGTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWHSKLI*GLKFHL
Trigger: AAGATGAAACTTTAAACCGCAAATCAGCTTTGAGTG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTGTACACCATCAAATaGTGTTATCGAAAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLYTIK*CYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGGCGTGTTATCATTTaGATCCATCACTTGAATATT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSWRVII*IHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR GCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTCTCTGTCAAATTTaGCTCTTCAGTTGTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFLCQI*LFSCKQ
Trigger: TTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR GCA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGATCAACAAGAGGTTTaGCCGACTAAAATAAGAAAA +
Preference number: 4 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMDQQEV*PTKIRK
Trigger: TTTTCTTATTTTAGTCGGGCAAACCTCTTGTTGATC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: LIISHIKILINFLPFKCHGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGGATGTCGGATCATCTaGATTATACTGAATAACATA +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWGCRII*IILNNI
Trigger: TATGTTATTCAGTATAATCCAGATGATCCGACATCC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
34% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CCA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGAAAAAGGTGAAGCTCTaGGTCTTTTGTATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWKKVKL*VFCIFY
Trigger: ATAGAAGATACAAAAGACCCAGAGCTTCACCTTTTT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CCA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR CCA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGCTTTGATTATTTGGTaGAAGCACTTCAATATACAC +
Preference number: 4 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSALIIW*KHFNIH
Trigger: GTGTATATTGAAGTGCTTCCACCAAATAATCAAAGC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: GAATGAGAGTAGLAAGNACLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: GAATGAGAGTAGLAAGNALSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS TCA 90 bp CCGTGCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGACTATCATTTCCACCCCTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: PCFALQEEHYPLLGP*VRKSARLSFPPLER
Trigger: TCGCTCCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437009.5
CDS GCA 90 bp CCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTATCATTTCCACCCCTGGAGCGATGGT +
Preference number: 5 (lower is better)
Translates to: PSLCRRSIIRCLDRE*VSPPDYHFHPWSDG
Trigger: ACCATCGCTCCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 90 bp GCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTATCATTTCCACCCCTGGAGCGATGGT +
Preference number: 5 (lower is better)
Translates to: ASLCRRSIIRCLDRE*VSPPDYHFHPWSDG
Trigger: ACCATCGCTCCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437009.5
CDS-3UTR CAA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS TCA 90 bp AGTTCCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGACTATCATTTCCACCCCTGGAGCGA +
Preference number: 5 (lower is better)
Translates to: SSFALQEEHYPLLGP*VRKSARLSFPPLER
Trigger: TCGCTCCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGCAGAAGGAGAGATGTTaGGTGGATGGGCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAQKERC*VDGQNF
Trigger: AAAATTTTGCCCATCCACCAAACATCTCTCCTTCTG...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS TCA 90 bp AGGGCCCTCCCAGTCGAACAGGGGAAGCAACTTTTAAGTTGTCCGTaGGGCAGGCACGGCGGGTTCTCACCACAGAACCATTCTGTGCAA +
Preference number: 5 (lower is better)
Translates to: RALPVEQGKQLLSCP*GRHGGFSPQNHSVQ
Trigger: TTGCACAGAATGGTTCTGTGGTGAGAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAGTTGCTTCCCCTGTTCGACTGGGAGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GGCGCTGCCACTGGTGCAGGAGCCGGCACTGCTGGTTTAGCCGCGGGTAATGCGAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: GAATGAGAGTAGLAAGNAKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...CGCATTACCCGCGGCTAAACCAGCAGTGCCGGCTCCTGCACCAGTGGCAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS GCA 90 bp AGTGCAGATGGAGTTCCTTCGCTCTGCAGGAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTAAGTCCGCCCGACTATCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: SADGVPSLCRRSIIR*LDRECVSPPDYHFH
Trigger: GTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCCATCTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp GTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGGCGGCGGCGGCGGCGGACATTAGGTTCTGATTaGAGTTCCACAGTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: VSKFFIEMRTWRRRRRRRTLGSD*SSTVLE
Trigger: TTCAAGAACTGTGGAACTCAAATCAGAACCTAATGT...CCGCCGCCGCCGCCGCCTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS CCA 90 bp AGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGACCTTaGCACCAGGAATTTGTTCCTGAACATAGCGATCCAAGATCCGGA +
Preference number: 5 (lower is better)
Translates to: RHLHAGELQWTPLRP*HQEFVPEHSDPRSG
Trigger: TCCGGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: SSREKASPCRRAPMDSTTPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS TCA 90 bp GTCTCCCTGAGCCCCAACAAGGATTTCATATGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGACTGCAGTGAGCTGTATGACACTGTC +
Preference number: 5 (lower is better)
Translates to: VSLSPNKDFICDLPI*PFVCVDCSELYDTV
Trigger: GACAGTGTCATACAGCTCACTGCAGTCGACGCAGACGAAGGGTCAAATGGGGAGATCACATATGAAATCCTTGTTGGGGCTCAGGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: SSREKASPCRRAPMDSTTCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYLSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LVCILASVIRWYLIAPWTSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDLGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTCTTGGCTTGTATTTaGGGTGAAAATGGGTCTACA +
Preference number: 5 (lower is better)
Translates to: HCLWSPDLQNASSFPIIRLLACI*GENGST
Trigger: TGTAGACCCATTTTCACCCAAAATACAAGCCAAGAG...CCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: PPKLILHCPLQGYLELQGPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...ACCCTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS TCA 90 bp CTCAGGAGTCCCAACAAGGATGGAATAGAGGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCGGTCCTGATCAATGGCTTGGATTGG +
Preference number: 5 (lower is better)
Translates to: LRSPNKDGIEDSWPI*WRLNIPVLINGLDW
Trigger: CCAATCCAAGCCATTGATCAGGACCGGAATATTCAACCGCCATCAGATAGGCCAGGAATCCTCTATTCCATCCTTGTTGGGACTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCACCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLELRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACCAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: NGGRRGGVGGPDVETESGVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGTTGCTGCTACCTCTTTaGTTTGTACAGATTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SSREKASPCRRAPMDSTTLLLPL*FVQIPV
Trigger: CACTGGAATCTGTACAAACAAAAGAGGTAGCAGCAA...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS TCA 90 bp TCAGTTCTTCCGGAGTTCTCAACTCAGGTATGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAGTGTTTGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: SVLPEFSTQVWQLDK*VDGNHECLAQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGAAGAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 90 bp ATCCAAGATCCGGAGTTCTCAACTCAGGTATGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAGTGTTTGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: IQDPEFSTQVWQLDK*VDGNHECLAQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGATCTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS CCA 90 bp ACGGCAATCACGAGTGTTTGGCACAAGGACACAAGGAAGAAACATTaGACCCAAGTCATCTCCATCCAGAACATCCACTGTGAGAGTGGT +
Preference number: 5 (lower is better)
Translates to: TAITSVWHKDTRKKH*TQVISIQNIHCESG
Trigger: ACCACTCTCACAGTGGATGTTCTGGATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 90 bp AGGTATGGCAGCTTGATAAGTGAGTGGACGGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAGAAACATTGGACCCAAGTCATCTCC +
Preference number: 5 (lower is better)
Translates to: RYGSLISEWTAITSV*HKDTRKKHWTQVIS
Trigger: GGAGATGACTTGGGTCCAATGTTTCTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS-3UTR CAA 90 bp GACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCCTCACCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: DSVDSDSSDSGVELSSSSPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...TGAGGAGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCREARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: SSREKASPCRRAPMDSTTTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: LPPKLILHCPLQGYLELQLEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCATGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: RIFTVALLDITGSPSSKAWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTCACCAGGATGTAAGACAAGAATCTTCACTGTGGCACTGCTGGACATCACAGCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: SHQDVRQESSLWHCWTSQLSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...CTGTGATGTCCAGCAGTGCCACAGTGAAGATTCTTGTCTTACATCCTGGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTCTAGGGAAAAGGCATCTCCATGCCGGCGAGCTCCAATGGACTCCACTACGCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: SSREKASPCRRAPMDSTTLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...CGTAGTGGAGTCCATTGGAGCTCGCCGGCATGGAGATGCCTTTTCCCTAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAGCAGACTTCAGTTTGTaGCTCTTAAGTGATCCGTCT +
Preference number: 5 (lower is better)
Translates to: NGGRRGGVGGPDVETESGADFSL*LLSDPS
Trigger: AGACGGATCACTTAAGAGCAACAAACTGAAGTCTGC...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAGTAAAACACAAGGCCTaGAAGGAGAAAGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: QRMMMKARANKAPSVYPRVKHKA*KEKVPR
Trigger: CCTTGGAACTTTCTCCTTCAAGGCCTTGTGTTTTAC...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGTCGGCAGGCATCAAGTaGGTCGTGCATTTAACACCT +
Preference number: 5 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLESAGIK*VVHLTP
Trigger: AGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGCTTCACCGCTGTATaGTCAGTCCCCACAGGGCAA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGFTAV*SVPTGQ
Trigger: TTGCCCTGTGGGGACTGACAATACAGCGGTGAAGCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 5 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCATCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGATGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: QRMMMKARANKAPSVYPRCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LPPKLILHCPLQGYLELQCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS CCA 90 bp TTCTTCCGGAGTTCTCAACTCAGGTATGGCAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTTTGGCACAAGGACACAAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: FFRSSQLRYGSLISE*TAITSVWHKDTRKK
Trigger: TTTCTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 90 bp CCCCTAGCTAGTTTGCAATCCTCATATTGCCAGTCATCATCATACTaGCCCAAGCAGATTTCAAAGAGAGAGCCCAGGATGATCCCTGAA +
Preference number: 5 (lower is better)
Translates to: PLASLQSSYCQSSSY*PKQISKREPRMIPE
Trigger: TTCAGGGATCATCCTGGGCTCTCTCTTTGAAATCTGCTTGGGCCAGTATGATGATGACTGGCAATATGAGGATTGCAAACTAGCTAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373957.7
ENST00000613657.5
ENST00000621708.4
CDS CCA 90 bp AAGATCCGGAGTTCTCAACTCAGGTATGGCAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTTTGGCACAAGGACACAAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: KIRSSQLRYGSLISE*TAITSVWHKDTRKK
Trigger: TTTCTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTTCATACATTGAGCTGTCTCCAAGTTCTTCATAGAGATGCGCACCTGGCGGAGCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: FHTLSCLQVLHRDAHLAEPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...CTCCGCCAGGTGCGCATCTCTATGAAGAACTTGGAGACAGCTCAATGTATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: SCFCHTLVPDSPMDLQTDFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...GTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCACGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: LVPDSPMDLQTDFRYYCYTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...GTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFISGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: LASVIRWYLIAPWTSRLTIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...AGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATGCGTCCTCCAGAGAAGGAAAAGAATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LFNAGHCLWSPDLQNASSREGKE*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATTCTTTTCCTTCTCT...GGAGGACGCATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373956.7
CDS-3UTR CAA 90 bp CTGCAGATCTATGATCTCTGGTCTATTTGGAACTTTCCTCATCAGCCTCCTGGGTTGGGGGACCAGACGTaGAAACGGAAAGTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LQIYDLWSIWNFPHQPPGLGDQT*KRKVEK
Trigger: TTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCCAA...CCCAGGAGGCTGATGAGGAAAGTTCCAAATAGACCAGAGATCATAGATCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTGTTCCCTCGACAATATaGTTCAAACTCCCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSVPSTI*FKLPLF
Trigger: AAACAAGGGGAGTTTGAACAATATTGTCGAGGGAAC...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SPSDSVDSDSSDSGVELSFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...GGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS TCA 90 bp TTAAAGAAAGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCAGAATTGTACCATCATCATACTGGC +
Preference number: 5 (lower is better)
Translates to: LKKVLWWGLVLQQSL*SACCPPELYHHHTG
Trigger: GCCAGTATGATGATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395433.5
ENST00000613346.4
CDS-3UTR CAA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCACCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCAATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: RIFTVALLDITGSPSSKAISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCATGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AATGGAGGTAGAAGAGGTGGTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: NGGRRGGVGGPDVETESGTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...TCCACTTTCCGTTTCAACGTCTGGTCCCCCAACACCACCTCTTCTACCTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TGCCCTCTTCAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: CPLQGYLELQGLYFLPQGTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...CCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: GAGPLSSSSECSSSSILGSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCACCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCLEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGGGATATCTTGAGCTTCAGGGTCTGTACTTTCTTCCACAGGGGCTGGTCCACGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: QGYLELQGLYFLPQGLVHVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...GTGGACCAGCCCCTGTGGAAGAAAGTACAGACCCTGAAGCTCAAGATATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCAGCTTTCTGCCTGGTGCCTTGCCACTGCTGCAGATCTATGATCTCTGGTCTATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: FSFLPGALPLLQIYDLWSIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...AGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAAGCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDLGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: NILALFHVVYVGSAAGGFDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNADGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: NILALFHVVYVGSAAGGFLSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGCAGACTTCAGTTTGTaGCTCTTAAGTGATCCGTCT +
Preference number: 5 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRADFSL*LLSDPS
Trigger: AGACGGATCACTTAAGAGCAACAAACTGAAGTCTGC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCTCCTCCTTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: LLTLWIPILLIQGWNSPPFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...AGGAGGAGAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: LVCILASVIRWYLIAPWTFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCAGAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SEGVSDSDSSSVVSDSLNLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...GTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTTCCACCGAAGCTGATTCTGCACTGCCCTCTTCAGGGATATCTTGAGCTTCAGACATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: LPPKLILHCPLQGYLELQTSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATGT...CTGAAGCTCAAGATATCCCTGAAGAGGGCAGTGCAGAATCAGCTTCGGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409834.5
CDS-3UTR CAA 90 bp GCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGATAATTCTTATGCATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: ASVIRWYLIAPWTSRLTFDNSYA*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGCATAAGAATTATC...GAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS TCA 90 bp TTAAAGAAAGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCAGAATTGTACCATTCCGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: LKKVLWWGLVLQQSL*SACCPPELYHSDFL
Trigger: AAGAAAGTCGGAATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACTTTCTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 90 bp GAGCTCATTCACTGTGGCATAGTAGCTTTCATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCTCACCACTATTCGCACTTCATGGTA +
Preference number: 5 (lower is better)
Translates to: ELIHCGIVAFMLESG*VVIPVSHHYSHFMV
Trigger: TACCATGAAGTGCGAATAGTGGTGAGAGACAGGAATGACAACTCACCCACTTTCAAGCATGAAAGCTACTATGCCACAGTGAATGAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 90 bp GGGCCCATCCAAAGCTCTTCATCATCAGACTGTGTGTGGTCACTATaGAATTCCAAAGCCTCCTTGATGTTCTTACTGTCAATCATGGAC +
Preference number: 5 (lower is better)
Translates to: GPIQSSSSSDCVWSL*NSKASLMFLLSIMD
Trigger: GTCCATGATTGACAGTAAGAACATCAAGGAGGCTTTGGAATTTCATAGTGACCACACACAGTCTGATGATGAAGAGCTTTGGATGGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 90 bp TTTCTGGTGAAAGTCTCTGTTTACTGGCTCCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATGGAAAAATCGTGGGTAATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FLVKVSVYWLQETKF*CPRMHMEKSWVILR
Trigger: CCTGAGGATTACCCACGATTTTTCCATATGCATCCTAGGACAGCAGAACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTTCACCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 90 bp ACCAACCCTCATGGCTTCACTAATTTCAAGGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTGATTATTTGGTGGAAGCACTTCAAT +
Preference number: 5 (lower is better)
Translates to: TNPHGFTNFKAIHQL*EARRALIIWWKHFN
Trigger: ATTGAAGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGCCTTGAAATTAGTGAAGCCATGAGGGTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCACCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGAATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: RLTELRLFFTVFSIVAGGIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...TCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCATTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNALKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCTCCTCTCTTTTTAATGCTGGTCACTGCCTCTGGAGTCCGGATCTCCAGAATATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: FSSLFNAGHCLWSPDLQNISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...ATTCTGGAGATCCGGACTCCAGAGGCAGTGACCAGCATTAAAAAGAGAGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCATCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCATCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: SKASTRKVILASWSGNASSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAGGATGATGATGAAGGCCAGAGCCAACAAGGCCCCTTCTGTGTATCCTAGAAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: QRMMMKARANKAPSVYPRKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...TCTAGGATACACAGAAGGGGCCTTGTTGGCTCTGGCCTTCATCATCATCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMITSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILLSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: LVCILASVIRWYLIAPWTLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTCTCTTGGCTTGTATTTaGGGTGAAAATGGGTCTACA +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFILLACI*GENGST
Trigger: TGTAGACCCATTTTCACCCAAAATACAAGCCAAGAG...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTCATCAGTGTTTCACCTaGCCTTATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRHQCFT*PYFLFL
Trigger: GAGAAAGAGGAAATAAGGCAAGGTGAAACACTGATG...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGGCTTCACCGCTGTATaGTCAGTCCCCACAGGGCAA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIGFTAV*SVPTGQ
Trigger: TTGCCCTGTGGGGACTGACAATACAGCGGTGAAGCC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGGGTGTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: EGVSDSDSSSVVSDSLNSATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...TGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGACACCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: QTDFRYYCYYYLILIPPHCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...GTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TACCTGATAGCCCCATGGACCTCCAGACTGACTTTCGCTACTACTGCTACTACTATAACTGTAATAATCTaGTCCATATTCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YLIAPWTSRLTFATTATTITVII*SIFLAR
Trigger: CCTGGCCAGGAATATGGACAAGATTATTACAGTTAT...AGTAGTAGCAGTAGTAGCGAAAGTCAGTCTGGAGGTCCATGGGGCTATCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS TCA 90 bp CATCATCATACTGGCCCAAGCAGATTTCAAAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATGTCCAGAGATAAAACTGTCGAAACA +
Preference number: 5 (lower is better)
Translates to: HHHTGPSRFQRESPG*SLKLNMSRDKTVET
Trigger: TGTTTCGACAGTTTTATCTCTGGACATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCTTTGAAATCTGCTTGGGCCAGTATGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613346.4
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS-3UTR CAA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCTGTTTCTGTGAGGCATaGATATCCACTCTCATATCA +
Preference number: 5 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVCFCEA*ISTLIS
Trigger: TGATATGAGAGTGGATATCAATGCCTCACAGAAACA...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLERMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFIRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTCTGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: VTFRVCSWRLLLVCILASDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACTCTTCTTCACTGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTAGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: TLLHCIQYSRWRIPPLILVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...TAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACAGTGAAGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGCAGAAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: QQKLHQPWSLWWQVHLLEQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...CTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTTCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGTGATAGGTGTACCCTaGACTGCATCCGGAGCCACC +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHVIGVP*TASGAT
Trigger: GGTGGCTCCGGATGCAGTCAAGGGTACACCTATCAC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CCGGTAAGACACATTTGCTCCAAGGTCGACATCTTTGGCCTCTATTTGAAGGATGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PVRHICSKVDIFGLYLKDGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...ATCCTTCAAATAGAGGCCAAAGATGTCGACCTTGGAGCAAATGTGTCTTACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLLEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTGGTTTGCATTCTTGCTTCTGTCATACGCTGGTACCTGATAGCCCCATGGACCTATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: LVCILASVIRWYLIAPWTYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...GGTCCATGGGGCTATCAGGTACCAGCGTATGACAGAAGCAAGAATGCAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAACGAGTACATCGGCTTaGCCGCTCAGTCCCTTCCCA +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVTSTSA*PLSPFP
Trigger: TGGGAAGGGACTGAGCGGCAAAGCCGATGTACTCGT...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GTGTCTGAGGATGCCTTTTGGTTCTCTCTGAGGGTCTGTTTTACACACTGTCGTGTTATTTCCCCTGCTTaGTTGAAAATGGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: VSEDAFWFSLRVCFTHCRVISPA*LKMVEK
Trigger: CTTCTCTACCATTTTCAACAAAGCAGGGGAAATAAC...ACGACAGTGTGTAAAACAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGGAGGGTCTGCATCTTCAGCATAAACTGTTGTGATAGGTGTACCCTTGACTGCGTTGTAAGCAATGGATaGCTGCTACCTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: RRVCIFSINCCDRCTLDCVVSNG*LLPLLF
Trigger: AAACAAAAGAGGTAGCAGCAATCCATTGCTTACAAC...GCAGTCAAGGGTACACCTATCACAACAGTTTATGCTGAAGATGCAGACCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAATTACACCAACCATGGTCCCTTTGGTGGCAAGTTCACTTACTGGAGGAGGTCGTTGTAAGCAATGGATaGCTGCTACCTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: KLHQPWSLWWQVHLLEEVVVSNG*LLPLLF
Trigger: AAACAAAAGAGGTAGCAGCAATCCATTGCTTACAAC...GACCTCCTCCAGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGGTGTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGAATCTTCACTGTGGCACTGCTGGACATCACAGGCTCCCCATCATCAAAAGCATTGTTCAAACTCCCCTaGTTTTGTTCAGATGTGATT +
Preference number: 5 (lower is better)
Translates to: RIFTVALLDITGSPSSKALFKLP*FCSDVI
Trigger: AATCACATCTGAACAAAACAAGGGGAGTTTGAACAA...TGCTTTTGATGATGGGGAGCCTGTGATGTCCAGCAGTGCCACAGTGAAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCACTGTCTTCTCCAGTaGAGCTGGTTTCATACTCTC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIHCLLQ*SWFHTL
Trigger: GAGAGTATGAAACCAGCTCAACTGGAGAAGACAGTG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAATGTGGATGCTTGTTaGGCAGGCCAGGAGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVINVDAC*AGQEVW
Trigger: CCACACCTCCTGGCCTGCCAAACAAGCATCCACATT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: NILALFHVVYVGSAAGGFFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...AAAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GGTGGTTTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTCTCTAATTTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GGFSIVTTTSSSSLGSLISSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...AATTAGAGAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAAACCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS TCA 90 bp GCTTGCTCCTTGTCTCGGGAAGGAGAAGTCACCAGATTATCCACTTaGGAAGTCACTGGGACAATTATAAGAAATTGTAGTGTGTCTACT +
Preference number: 5 (lower is better)
Translates to: ACSLSREGEVTRLST*EVTGTIIRNCSVST
Trigger: AGTAGACACACTACAATTTCTTATAATTGTCCCAGTGACTTCTCAAGTGGATAATCTGGTGACTTCTCCTTCCCGAGACAAGGAGCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463095.2
CDS-3UTR CAA 90 bp CCGGATCTCCAGAATGCGTCCTCCTTCCCCATAATACGGCTGAAAGTCTTTATTTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: PDLQNASSFPIIRLKVFISLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...AATAAAGACTTTCAGCCGTATTATGGGGAAGGAGGACGCATTCTGGAGATCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPPAVP*ISMLST
Trigger: GGTGGACAACATGCTGATCAAAGGGACTGCTGGAGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGACTGTCCGAAATGGTaGCTCCCACTGGGGCAGATT +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWDCPKW*LPLGQI
Trigger: AATCTGCCCCAGTGGGAGCAACCATTTCGGACAGTC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGGTGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: GAGPLSSSSECSSSSILGVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...ACCTAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: VLCCNLQSLLLATSFGLHLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...ATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCCAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGTTTACTGTGGCAGTaGAGGTCCCATCTGGCCTGC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSCLLWQ*RSHLAC
Trigger: GCAGGCCAGATGGGACCTCAACTGCCACAGTAAACA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCATCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNASMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTCTCTGACTCAGATTCCTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: VSDSDSSSVVSDSLNSDSQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...AGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAGGAATCTGAGTCAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCCCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGTTGGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: IQYSRWRIPPLILQCFLLGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...CAACAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGAAGGAACTCGGAGATaGGCAAGGACCACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWEGTRR*ARTTSR
Trigger: CCTGGAAGTGGTCCTTGCCAATCTCCGAGTTCCTTC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCATATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAAAAGGGCATCACAACTaGTTGATGTTTCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAKGHHN*LMFPVF
Trigger: GAAGACAGGAAACATCAACAAGTTGTGATGCCCTTT...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTCTTGCAGACTTCAGTTaGTTGCTCTTAAGTGATCCG +
Preference number: 5 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSLADFS*LLLSDP
Trigger: CGGATCACTTAAGAGCAACAAACTGAAGTCTGCAAG...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCTACTCTATACCTCACACGACTTGCAGGTAATCCAGGAGGGTCTGCATCTTCAACATTAGGTTCTGATTaGAGTTCCACAGTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: STLYLTRLAGNPGGSASSTLGSD*SSTVLE
Trigger: TTCAAGAACTGTGGAACTCAAATCAGAACCTAATGT...TGAAGATGCAGACCCTCCTGGATTACCTGCAAGTCGTGTGAGGTATAGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTTGGGGGACCAGACGTaGAAACGGAAAGTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGLGDQT*KRKVEK
Trigger: TTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCCAA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGTTCCCTCGACAATATaGTTCAAACTCCCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SKASTRKVILASWSGNASVPSTI*FKLPLF
Trigger: AAACAAGGGGAGTTTGAACAATATTGTCGAGGGAAC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAAGCAACTTTTAAGTaGTCCGTGAGGCAGGCACGG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEATFK*SVRQAR
Trigger: CCGTGCCTGCCTCACGGACAACTTAAAAGTTGCTTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTGGCCAACCTACGGTaGCAATTCTATGACAACTCT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILANLR*QFYDNS
Trigger: AGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTATCGCTGTGTAATTaGCAGGCACCAATAGGCATC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPILSLCN*QAPIGI
Trigger: GATGCCTATTGGTGCCTGCAAATTACACAGCGATAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTACCCTTGACTTCCTaGACCTCCTCAACCATGGGC +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHLPLTS*TSSTMG
Trigger: GCCCATGGTTGAGGAGGTCAAGGAAGTCAAGGGTAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTCCACACCTCCTTTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: YYCYYYLILIPPHFPHLLFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...AAGGAGGTGTGGAAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTTTCGATAGTTACAACTACTTCTCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VVYVGSAAGGFSIVTTTSLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...AGAAGTAGTTGTAACTATCGAAAAACCACCAGCAGCTGAGCCTACATACACAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000615043.1
CDS-3UTR CAA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAGAGGCATTTCATACATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TGAGPLSSSSECSSSSILEAFHT*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGTATGAAATGCCTC...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTAGGATGACCATTGTCTaGTTCAGCCATCATCATACT +
Preference number: 5 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLRMTIV*FSHHHT
Trigger: AGTATGATGATGGCTGAACAAGACAATGGTCATCCT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409834.5
CDS TCA 90 bp CTGTCCATTTGGTCCATCATCTATATCTGTAGCTCCATTGTCTCCTaGAAATCCTGTGAATATTGTGGTACCAACTGGAGTGAGCTCATT +
Preference number: 5 (lower is better)
Translates to: LSIWSIIYICSSIVS*KSCEYCGTNWSELI
Trigger: AATGAGCTCACTCCAGTTGGTACCACAATATTCACAGGATTTTCAGGAGACAATGGAGCTACAGATATAGATGATGGACCAAATGGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 90 bp CATCATCAGACTGTGTGTGGTCACTATGAAATTCCAAAGCCTCCTTaGTGTTCTTACTGTCAATCATGGACTCCTGTTCAACTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: HHQTVCGHYEIPKPP*CSYCQSWTPVQLCF
Trigger: AAAGCACAGTTGAACAGGAGTCCATGATTGACAGTAAGAACATCAAGGAGGCTTTGGAATTTCATAGTGACCACACACAGTCTGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp AAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: KVLCCNLQSLLLATSFGLVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...CAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHLRYGS*ISEWTA
Trigger: TGCCGTCCACTCACTTATCAAGCTGCCATACCTGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCACCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: SPSRSTIPLLSANPLTFLVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...TAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CAA 90 bp AGCACTCATCACAGCAAAACTTCCACCTACTGTGATCTCTTTCAAAGTGCTGTGTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: STHHSKTSTYCDLFQSAVFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...CACAGCACTTTGAAAGAGATCACAGTAGGTGGAAGTTTTGCTGTGATGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTTTGGTTTGCATTCTTGCTAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: VVTFRVCSWRLLLVCILAKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...AGCAAGAATGCAAACCAAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCAGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSSIIRC*DRECVS
Trigger: ACTTACGCACTCACGGTCCAAGCAGCGGATAATGCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TGTATTCAGTATAGTCGCTGGAGGATTCCTCCTCTGATTCTACAGTGCTTTCTGCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: CIQYSRWRIPPLILQCFLQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...CAGAAAGCACTGTAGAATCAGAGGAGGAATCCTCCAGCGACTATACTGAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GAATATTCTGGCTCTCTTCCATGTTGTGTATGTAGGCTCAGCTGCTGGTGGTTTAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: EYSGSLPCCVCRLSCWWFKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...AAACCACCAGCAGCTGAGCCTACATACACAACATGGAAGAGAGCCAGAATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTTTCTCCTTCTGACTCTGTGGATTCCGATTCTTCTGATTCAGGGGTGGAACTCGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: FSPSDSVDSDSSDSGVELVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...GAGTTCCACCCCTGAATCAGAAGAATCGGAATCCACAGAGTCAGAAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTAATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: TGAGPLSSSSECSSSSILIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFLGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTTTCGATAGTTACAACTACTTCTTCCTCCTCACTAGGCTCTCTAATTTCAACCCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: FSIVTTTSSSSLGSLISTLGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...GGTTGAAATTAGAGAGCCTAGTGAGGAGGAAGAAGTAGTTGTAACTATCGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGACTCCACTACGACCTaGGCACCAGGAATTTGTTCC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDSTTT*APGICS
Trigger: GGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCACTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNALCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373956.7
ENST00000414367.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTCTGCCTGGTGCCTaGCCACTGCTGCAGATCTAT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFLPGA*PLLQIY
Trigger: ATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTATTTCTGCCTGGTGCCTaGCCACTGCTGCAGATCTAT +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVFLPGA*PLLQIY
Trigger: ATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAA...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGTTTCTGCCTGGTGCCTaGCCACTGCTGCAGATCTAT +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMFLPGA*PLLQIY
Trigger: ATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAAA...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTCATCAGTGTTTCACCTaGCCTTATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSHQCFT*PYFLFL
Trigger: GAGAAAGAGGAAATAAGGCAAGGTGAAACACTGATG...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAAGTAAAACACAAGGCCTaGAAGGAGAAAGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKVKHKA*KEKVPR
Trigger: CCTTGGAACTTTCTCCTTCAAGGCCTTGTGTTTTAC...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATTGGTATATGGAGGTaGTTCCAGGGGCCCATCCAA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIIGIWR*FQGPIQ
Trigger: TTGGATGGGCCCCTGGAACAACCTCCATATACCAAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGTCACAGTTTTGTCATaGGTATATGGAGGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIVTVLS*VYGGCS
Trigger: GGAACAACCTCCATATACCAATGACAAAACTGTGAC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAGAGTCGCAAAACATTaGGTTGAATCCGTGTACCTA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRVAKH*VESVYL
Trigger: TAGGTACACGGATTCAACCAAATGTTTTGCGACTCT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTCTTCTGTAGTCTCAGACTCACTGAACTCAGACTCTTCTTCACTGTATTCAGTTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: LFCSLRLTELRLFFTVFSFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...ACTGAATACAGTGAAGAAGAGTCTGAGTTCAGTGAGTCTGAGACTACAGAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp ACTGACTTTCGCTACTACTGCTACTACTACCTGATTCTGATTCCTCCTCACTTTGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: TDFRYYCYYYLILIPPHFATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...AAAGTGAGGAGGAATCAGAATCAGGTAGTAGTAGCAGTAGTAGCGAAAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTATAACTGTAATAATCTaGTCCATATTCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLITVII*SIFLAR
Trigger: CCTGGCCAGGAATATGGACAAGATTATTACAGTTAT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS CCA 90 bp AGCCTTAATAACCAAATCAAATTTCTGGTGAAAGTCTCTGTTTACTaGCTCCAGGAGACTAAGTTCTGCTGTCCTAGGATGCATATGGAA +
Preference number: 5 (lower is better)
Translates to: SLNNQIKFLVKVSVY*LQETKFCCPRMHME
Trigger: TTCCATATGCATCCTAGGACAGCAGAACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTTCACCAGAAATTTGATTTGGTTATTAAGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AGTGCACTTGACCATTTATTCCAGCATCAGGGTCTGTTGCTTTTACTTGACCCATCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: SALDHLFQHQGLLLLLDPSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...TGGGTCAAGTAAAAGCAACAGACCCTGATGCTGGAATAAATGGTCAAGTGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTATCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: TGAGPLSSSSECSSSSILSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGGCAATCACGAGTGTTaGGCACAAGGACACAAGGAA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHGNHEC*AQGHKE
Trigger: TTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617271.4
CDS-3UTR CAA 90 bp TGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: WKKRASQLVDVSCLLRLSKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...ACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCAC +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVEARRA*IIWWKH
Trigger: GTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTC...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGGCCAAGGTTAGAGTaGAATGACGAGGGTGTACTG +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHWPRLE*NDEGVL
Trigger: CAGTACACCCTCGTCATTCAACTCTAACCTTGGCCA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPITVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCAACCATGGTCCCTTaGGTGGCAAGTTCACTTACT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPTMVP*VASSLT
Trigger: AGTAAGTGAACTTGCCACCAAAGGGACCATGGTTGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFLEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CCCTCAAGGTCAACGATTCCTCTTTTATCAGCTAATCCTCTAACTTTCTTAAAATTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: PSRSTIPLLSANPLTFLKFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...TTTTAAGAAAGTTAGAGGATTAGCTGATAAAAGAGGAATCGTTGACCTTGAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp ACAGGGGCTGGTCCACTTTCTTCTTCTTCTGAGTGTTCTTCTTCTTCCATCTTATATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: TGAGPLSSSSECSSSSILYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...TAAGATGGAAGAAGAAGAACACTCAGAAGAAGAAGAAAGTGGACCAGCCCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCTCTTTCAAAGTGCTGTGTTGTAACCTTCAGAGTTTGCTCCTGGCGACTTCTTAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: SLSKCCVVTFRVCSWRLLKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...AAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACAACACAGCACTTTGAAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCAAAGGCCTCTACCAGAAAAGTGATACTTGCTTCTTGGTCTGGAAATGCCTCAGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: SKASTRKVILASWSGNASVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...TGAGGCATTTCCAGACCAAGAAGCAAGTATCACTTTTCTGGTAGAGGCCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp ACGTACTTTAAACTGTCTGTAGCTGACCAAAACCACCAAGATGGCAGGAATGCAGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: TYFKLSVADQNHQDGRNAVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...TGCATTCCTGCCATCTTGGTGGTTTTGGTCAGCTACAGACAGTTTAAAGTACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGATGGCTCTGTTGGTTaGGGGGTCAATTGCATAGAC +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMDGSVG*GVNCID
Trigger: GTCTATGCAATTGACCCCCAAACCAACAGAGCCATC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTATCGATGGCTCTGTaGGTTTGGGGGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLSMAL*VWGSIA
Trigger: TGCAATTGACCCCCAAACCAACAGAGCCATCGATAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGTCTCTGCCACTCTTCACCCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: EFQIIFIFFLKASLPLFTLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...GGTGAAGAGTGGCAGAGACGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCTTGCAGACTTCAGTTaGTTGCTCTTAAGTGATCCG +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFLADFS*LLLSDP
Trigger: CGGATCACTTAAGAGCAACAAACTGAAGTCTGCAAG...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCGGCAGGCATCAAGTaGGTCGTGCATTTAACACCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSAGIK*VVHLTP
Trigger: AGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCACTGTCTTCTCCAGTaGAGCTGGTTTCATACTCTC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHHCLLQ*SWFHTL
Trigger: GAGAGTATGAAACCAGCTCAACTGGAGAAGACAGTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAATTCCAAAGCCTCCTaGATGTTCTTACTGTCAATC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPINSKAS*MFLLSI
Trigger: GATTGACAGTAAGAACATCAAGGAGGCTTTGGAATT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTCCCCTAGCTAGTTaGCAATCCTCATATTGCCAG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPPLAS*QSSYCQ
Trigger: CTGGCAATATGAGGATTGCAAACTAGCTAGGGGAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373957.7
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCCTCTTTCCTACCCTaGACTTCCTTGACCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHSSFLP*TSLTSS
Trigger: TGAGGAGGTCAAGGAAGTCAAGGGTAGGAAAGAGGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATAACTGTAATAATCTaGTCCATATTCCTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIITVII*SIFLAR
Trigger: CCTGGCCAGGAATATGGACAAGATTATTACAGTTAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS TCA 90 bp GATATTTCAGGGAAGGTTGGCGTGTTATCATTTGCATCCATCACTTaGATATTGACGATGACTGGCTCACTTTCTTGTACACCATCAAAT +
Preference number: 5 (lower is better)
Translates to: DISGKVGVLSFASIT*ILTMTGSLSCTPSN
Trigger: ATTTGATGGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 90 bp TCTTTAGTCCATGTAAGATTATGCAGCAAGTTTTCTTGCCAAGGCTaGCTCTTGCACATCCCTTTAAAAAGAACCAGTGCTCATAATCTA +
Preference number: 5 (lower is better)
Translates to: SLVHVRLCSKFSCQG*LLHIPLKRTSAHNL
Trigger: TAGATTATGAGCACTGGTTCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCATAATCTTACATGGACTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS GCA 90 bp AAAGTTTCATCTTTAGTCCATGTAAGATTATGCAGCAAGTTTTCTTaGCAAGGCTGCCTCTTGCACATCCCTTTAAAAAGAACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: KVSSLVHVRLCSKFS*QGCLLHIPLKRTSA
Trigger: AGCACTGGTTCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCATAATCTTACATGGACTAAAGATGAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS GCA 90 bp ATACACATCATAGGATATTTCAGGGAAGGTTGGCGTGTTATCATTTaGATCCATCACTTGAATATTGACGATGACTGGCTCACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: IHIIGYFREGWRVII*IHHLNIDDDWLTFL
Trigger: CAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATCCTATGATGTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 90 bp TGGCGTGTTATCATTTGCATCCATCACTTGAATATTGACGATGACTaGCTCACTTTCTTGTACACCATCAAATGCTGTTATCGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: WRVIICIHHLNIDDD*LTFLYTIKCCYRKG
Trigger: ACCTTTTCGATAACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 90 bp TTCCTTAATAACCAAATCAAATTTCTGGTGAAAGTCTCTGTTTACTaGCTCCAGGAGACTAAGTTCTGCTGTCCTAGGATGCATATGGAA +
Preference number: 5 (lower is better)
Translates to: FLNNQIKFLVKVSVY*LQETKFCCPRMHME
Trigger: TTCCATATGCATCCTAGGACAGCAGAACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTTCACCAGAAATTTGATTTGGTTATTAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395442.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHCQGCL*HIPLKR
Trigger: TCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPISLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000395430.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCCTCCCCTAGCTAGTTaGCAATCATCATCATACTGG +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHPPLAS*QSSSYW
Trigger: CCAGTATGATGATGATTGCAAACTAGCTAGGGGAGG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGATAGTGCCCACTTTTTaGTTGATGCACTGGACCTGC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWIVPTF*LMHWTC
Trigger: GCAGGTCCAGTGCATCAACAAAAAAGTGGGCACTAT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTGAAAGTGGGTGAGTaGTCATTCCTGTCTCTCACC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWLKVGE*SFLSLT
Trigger: GGTGAGAGACAGGAATGACAACTCACCCACTTTCAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGGCACGGTCATTAGCTaGGATTATGACAAAGTAGCG +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWGTVIS*DYDKVA
Trigger: CGCTACTTTGTCATAATCCAAGCTAATGACCGTGCC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCCTCTCATTCAGATTTaGGGCACGGTCATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWPLIQI*GTVISL
Trigger: CAAGCTAATGACCGTGCCCAAAATCTGAATGAGAGG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGTCCTGATCAATGGCTaGGATTGGTGGCGTAACAAT +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMVLING*DWWRNN
Trigger: ATTGTTACGCCACCAATCCAAGCCATTGATCAGGAC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCGAAAAGGTGTAAGTTaGCTGTTCTTCCCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSRKGVS*LFFPVH
Trigger: GTGGACAGGGAAGAACAGCAAACTTACACCTTTTCG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGTCTGTTGCTTTTACTaGACCCACAAAGGCATTGGC +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSVCCFY*THKGIG
Trigger: GCCAATGCCTTTGTGGGTCAAGTAAAAGCAACAGAC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGATCTTTGGCCTCTATTaGAAGGATGGTAGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWIFGLY*KDGSPS
Trigger: GCTGGGACTACCATCCTTCAAATAGAGGCCAAAGAT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCCGGTAAGACACATTaGCTCCAAGGTCGACATCTT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHSGKTH*LQGRHL
Trigger: AAGATGTCGACCTTGGAGCAAATGTGTCTTACCGGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTCTGTTAAGCTTCACTGCTGTGTAAATGCTCCCATTGGATGTGATACGAAACAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: FSVKLHCCVNAPIGCDTKQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...TTTCGTATCACATCCAATGGGAGCATTTACACAGCAGTGAAGCTTAACAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCCAGGGAATCAGCTaGGACTCGAAGTACATAGCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFQGIS*DSKYIA
Trigger: AGCTATGTACTTCGAGTCCAAGCTGATTCCCTGGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLGTRN*FLNIAI
Trigger: GATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGGTTTGGGGGTCAATaGCATAGACAGTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPWFGGQ*HRQSSH
Trigger: GTGACTTGACTGTCTATGCAATTGACCCCCAAACCA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKALCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCTTGCTGCTACCTCTTTaGTTTGTACAGATTCCAGTG +
Preference number: 5 (lower is better)
Translates to: KRASQLVDVSCLLRLSYFLLLPL*FVQIPV
Trigger: CACTGGAATCTGTACAAACAAAAGAGGTAGCAGCAA...GAAATAACTCAGTCTCAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGGGGGACCAGACGTaGAAACGGAAAGTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLGDQT*KRKVEK
Trigger: TTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCCAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCTTTCATACTTATGCATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIFHTYA*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGCATAAGTATGAAA...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373965.6
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAACGGCGACTCCCATATaGAGGCATTTCATACTTATG +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMITATPI*RHFILM
Trigger: CATAAGTATGAAATGCCTCAATATGGGAGTCGCCGT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373965.6
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCCGATCAACAACTAACTaGATCATTCTTTTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIRSTTN*IILFLA
Trigger: GGCAAGAAAAAGAATGATCAAGTTAGTTGTTGATCG...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTGTCACTGCCAACTaGTCTAGTTTCTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICVTAN*SSFLKG
Trigger: GCCCTTTAAGAAACTAGACAAGTTGGCAGTGACACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATGTGTCACTGCCAACTaGTCTAGTTTCTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMICVTAN*SSFLKG
Trigger: GCCCTTTAAGAAACTAGACAAGTTGGCAGTGACACA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAAATTGGTCACAGTTTaGTCATTGGTATATGGAGGT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIKLVTV*SLVYGG
Trigger: ACCTCCATATACCAATGACAAAACTGTGACCAATTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCATACTGACCAAATATTaGGTTTGGTTGCTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPIILTKY*VWLLCV
Trigger: TACACAGAGCAACCAAACCAAATATTTGGTCAGTAT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTATCGCTGTGTAATTaGCAGGCACCAATAGGCATC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMILSLCN*QAPIGI
Trigger: GATGCCTATTGGTGCCTGCAAATTACACAGCGATAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTCTGTTGCTTCCTCTaGGTCCAGAGTGAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFCCFL*VQSEFQ
Trigger: TTGAAACTCACTCTGGACCAAGAGGAAGCAACAGAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCCATGGGCCTTCTTCTaGCAAGCACAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHPWAFF*QAQCFS
Trigger: GGAAAAACATTGTGCTTGCAAGAAGAAGGCCCATGG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTCTTCAGGGATATCTaGAGCTTCAGGGTCTGTACT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHLFRDI*SFRVCT
Trigger: AGTACAGACCCTGAAGCTCAAGATATCCCTGAAGAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACACTCAGCTTGACGTaGTCTGTAGCTGACCAAAAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTLSLT*SVADQN
Trigger: GTTTTGGTCAGCTACAGACAACGTCAAGCTGAGTGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTTTGTACACTCAGCTaGACGTTGTCTGTAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLCTLS*TLSVAD
Trigger: GTCAGCTACAGACAACGTCAAGCTGAGTGTACAAAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CAA 90 bp AAGCGTCTAAGAGTCGCAAAACATTTGGTTGAATCCGTGTACCTAATTCCCATCAACAAAAACTCCAAATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KRLRVAKHLVESVYLIPINKNSK*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATTTGGAGTTTTTGTT...GATGGGAATTAGGTACACGGATTCAACCAAATGTTTTGCGACTCTTAGACGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHPLISM*STRIVP
Trigger: TGGTACAATTCTGGTGGACAACATGCTGATCAAAGG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCACAAGGAAGAAACATaGGACCCAAGTCATCTCCAT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHHKEET*DPSHLH
Trigger: ATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGACTGGCTCACTTTCTaGTACACCATCAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSDWLTF*YTIKCC
Trigger: ACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAATGGCATATGTTATaGAGTCTCCCTCTCGATCAG +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQWHML*SLPLDQ
Trigger: CTGATCGAGAGGGAGACTCAATAACATATGCCATTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCGAAGTACATAGCTaGTCCTGGTCTCATAATCCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLEVHS*SWSHNP
Trigger: TGGATTATGAGACCAGGACAAGCTATGTACTTCGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEFVQS*YTQLDV
Trigger: TACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGCAGACTTCAGTTTGTaGCTCTTAAGTGATCCGTCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPADFSL*LLSDPS
Trigger: AGACGGATCACTTAAGAGCAACAAACTGAAGTCTGC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTTGCAGACTTCAGTTaGTTGCTCTTAAGTGATCCG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLADFS*LLLSDP
Trigger: CGGATCACTTAAGAGCAACAAACTGAAGTCTGCAAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTAAAACACAAGGCCTaGAAGGAGAAAGTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVKHKA*KEKVPR
Trigger: CCTTGGAACTTTCTCCTTCAAGGCCTTGTGTTTTAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp AATCACTGTGACAGTAGCAATACCAGGTGGCATTGTTCCATAAATATCAAAGGCTTGTTCAAACTCCCCTaGTTTTGTTCAGATGTGATT +
Preference number: 5 (lower is better)
Translates to: NHCDSSNTRWHCSINIKGLFKLP*FCSDVI
Trigger: AATCACATCTGAACAAAACAAGGGGAGTTTGAACAA...GCCTTTGATATTTATGGAACAATGCCACCTGGTATTGCTACTGTCACAGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGTCACAGTTTTGTCATaGGTATATGGAGGTTGTTCC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIVTVLS*VYGGCS
Trigger: GGAACAACCTCCATATACCAATGACAAAACTGTGAC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAGAGTCGCAAAACATTaGGTTGAATCCGTGTACCTA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRVAKH*VESVYL
Trigger: TAGGTACACGGATTCAACCAAATGTTTTGCGACTCT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCCTGGCGACTTCTTTaGGTTTGCATTCTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHSWRLL*VCILAS
Trigger: AGAAGCAAGAATGCAAACCAAAAGAAGTCGCCAGGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTGTAACCTTCAGAGTTaGCTCCTGGCGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWCNLQS*LLATSF
Trigger: AAAAGAAGTCGCCAGGAGCAAACTCTGAAGGTTACA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCTTTCAAGTGTCACTTaGGAGAACACACAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHLSSVT*ENTQKA
Trigger: TGCCTTCTGTGTGTTCTCCAAAGTGACACTTGAAAG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTTGTCCACCAGAATaGTACCATCATCATACTGGC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCCPPE*YHHHTG
Trigger: GCCAGTATGATGATGGTACAATTCTGGTGGACAACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395433.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAATTCGTGCAGTCTTaGTACACTCAGCTTGACGTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEFVQS*YTQLDV
Trigger: AACGTCAAGCTGAGTGTACAAAGACTGCACGAATTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CAA 90 bp TTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCAAGGCGGATAATTCTTATGCATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: FLLVQSEFQIIFIFFLKADNSYA*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGCATAAGAATTATC...CGCCTTGAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409834.5
ENST00000617271.4
CDS CCA 90 bp CATGTCTGTATAAACATACACATCATAGGATATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATCCATCACTTGAATATTGACGATGAC +
Preference number: 5 (lower is better)
Translates to: HVCINIHIIGYFREG*RVIICIHHLNIDDD
Trigger: GTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATCCTATGATGTGTATGTTTATACAGACATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTGTTTCTGTGAGGCATaGATATCCACTCTCATATCA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVICFCEA*ISTLIS
Trigger: TGATATGAGAGTGGATATCAATGCCTCACAGAAACA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTGTTTCTGTGAGGCATaGATATCCACTCTCATATCA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPCFCEA*ISTLIS
Trigger: TGATATGAGAGTGGATATCAATGCCTCACAGAAACA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TGTTGCTTCCTCTTGGTCCAGAGTGAGTTTCAAATAATCTTTATCTTCTTCCTCTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: CCFLLVQSEFQIIFIFFLSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...GAGGAAGAAGATAAAGATTATTTGAAACTCACTCTGGACCAAGAGGAAGCAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTG +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWISVAP*SPENPV
Trigger: CACAGGATTTTCAGGAGACAATGGAGCTACAGATAT...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAATTTCAAAGGTGTCATaGGATGTCGGATCATCTGGA +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVISKVS*DVGSSG
Trigger: TCCAGATGATCCGACATCCAATGACACCTTTGAAAT...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: GMLLIISHIKILINFLPFRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...GAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATATTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVILPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCACAAACTGTAGTGCACTaGACCATTTATTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSQTVVH*TIYSSI
Trigger: GATGCTGGAATAAATGGTCAAGTGCACTACAGTTTG...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATCAATGTCCAAAACCTaGATGGCCAAGGTTAGAGTT +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSSMSKT*MAKVRV
Trigger: AACTCTAACCTTGGCCATCAAGGTTTTGGACATTGA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATACAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAGGAGCCACCATCCCTTaGTATATTCGTTTACTAAAG +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVGATIP*YIRLLK
Trigger: CTTTAGTAAACGAATATACAAAGGGATGGTGGCTCC...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGAGTACACAATACTTaGATTAATGGCAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGVHNT*INGSSR
Trigger: TCTGCTGCTGCCATTAATCAAAGTATTGTGTACTCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAGTAGGAGGCACATaGGAAACAATGACTTGCATA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRVGGT*ETMTCI
Trigger: TATGCAAGTCATTGTTTCCAATGTGCCTCCTACTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAAGGGCATCACAACTaGTTGATGTTTCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKGHHN*LMFPVF
Trigger: GAAGACAGGAAACATCAACAAGTTGTGATGCCCTTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTAAAAGGGCATCACAACTaGTTGATGTTTCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVKGHHN*LMFPVF
Trigger: GAAGACAGGAAACATCAACAAGTTGTGATGCCCTTT...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCTTGGCTTGTATTTaGGGTGAAAATGGGTCTACA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLLACI*GENGST
Trigger: TGTAGACCCATTTTCACCCAAAATACAAGCCAAGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGCTGCTACCTCTTTaGTTTGTACAGATTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLLLPL*FVQIPV
Trigger: CACTGGAATCTGTACAAACAAAAGAGGTAGCAGCAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCATCAGTGTTTCACCTaGCCTTATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPHQCFT*PYFLFL
Trigger: GAGAAAGAGGAAATAAGGCAAGGTGAAACACTGATG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAGAAGGAGAGATGTTaGGTGGATGGGCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQKERC*VDGQNF
Trigger: AAAATTTTGCCCATCCACCAAACATCTCTCCTTCTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp TTCCACTACAAATCCTTCTTTTCCCTCTTTAATTGGTGGTATTATGAGTCTGTACAGAAGGAGAGATGTTaGGTGGATGGGCAAAATTTT +
Preference number: 5 (lower is better)
Translates to: FHYKSFFSLFNWWYYESVQKERC*VDGQNF
Trigger: AAAATTTTGCCCATCCACCAAACATCTCTCCTTCTG...TACAGACTCATAATACCACCAATTAAAGAGGGAAAAGAAGGATTTGTAGTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTTCCCTCGACAATATaGTTCAAACTCCCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVPSTI*FKLPLF
Trigger: AAACAAGGGGAGTTTGAACAATATTGTCGAGGGAAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAATTCCAAAGCCTCCTaGATGTTCTTACTGTCAATC +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMINSKAS*MFLLSI
Trigger: GATTGACAGTAAGAACATCAAGGAGGCTTTGGAATT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTTTAAAAAGATGGTTTaGGCCAACCTACGGTTGCAA +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHFKKMV*ANLRLQ
Trigger: TTGCAACCGTAGGTTGGCCAAAACCATCTTTTTAAA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTACAGAGACTACTTTaGCTGTCTTGTGATTCGGTC +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLQRLL*LSCDSV
Trigger: GACCGAATCACAAGACAGCAAAAGTAGTCTCTGTAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGTTCTTTTTGTTCTTCTaGTGGCTCCTCTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWFFLFF*WLLFPT
Trigger: GGTAGGAAAGAGGAGCCACAAGAAGAACAAAAAGAA...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACCATCTTAGGTTCTTTTaGTTCTTCTTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHHLRFF*FFLWLL
Trigger: GAGGAGCCACAAGAAGAACAAAAAGAACCTAAGATG...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGCGACTTCTTTTGGTTaGCATTCTTGCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWATSFG*HSCFCH
Trigger: ATGACAGAAGCAAGAATGCAAACCAAAAGAAGTCGC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000615043.1
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTGTTTCTGTGAGGCATaGATATCCACTCTCATATCA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPCFCEA*ISTLIS
Trigger: TGATATGAGAGTGGATATCAATGCCTCACAGAAACA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCATGTTTCTGTGAGGCATaGATATCCACTCTCATATCA +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSCFCEA*ISTLIS
Trigger: TGATATGAGAGTGGATATCAATGCCTCACAGAAACA...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVISLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TTCTGGCATGCTTCTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: FWHASDHKSYQNLDQFPPSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...GGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAGAAGCATGCCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTTGGGTTCAGGAAAAGCATTaGCTTAACAGGATCCATCAA +
Preference number: 5 (lower is better)
Translates to: HKSYQNLDQFPPFQVSLWVQEKH*LNRIHQ
Trigger: TTGATGGATCCTGTTAAGCAAATGCTTTTCCTGAAC...CCAAAGTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAGGATGACCATTGTCTaGTTCAGCCTTAATAACCAA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHRMTIV*FSLNNQ
Trigger: TTGGTTATTAAGGCTGAACAAGACAATGGTCATCCT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTTCCAGGATATAGCCTaGATAACTGGGCATTGTAAA +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHFQDIA*ITGHCK
Trigger: TTTACAATGCCCAGTTATCAAGGCTATATCCTGGAA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACAAAGGTGAAGTCAAATaGAGACTGTCCGAAATGGTT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHKGEVK*RLSEMV
Trigger: AACCATTTCGGACAGTCTCAATTTGACTTCACCTTT...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395440.5
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGTATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSVSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATAC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACGAGGGCTTTGATTATTaGGTGGAAGCACTTCAATAT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHEGFDY*VEALQY
Trigger: ATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTC...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395446.5
ENST00000409834.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCTCCCTCTCGATCAGTaGCCTGTAGATTTAATAAAA +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSLPLDQ*PVDLIK
Trigger: TTTTATTAAATCTACAGGCAACTGATCGAGAGGGAG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GAGTTTATAAGACTTGTCCAAATCGAAGCTGAAAAATGTTATGATGGCCATTCAACAGTGTATGTTGAATaGGTGAACACAGGACTGTTA +
Preference number: 5 (lower is better)
Translates to: EFIRLVQIEAEKCYDGHSTVYVE*VNTGLL
Trigger: TAACAGTCCTGTGTTCACCAATTCAACATACACTGT...TGAATGGCCATCATAACATTTTTCAGCTTCGATTTGGACAAGTCTTATAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTCAATACCAGGTGGCATaGTTCCATAAATATCAAAGG +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSQYQVA*FHKYQR
Trigger: CCTTTGATATTTATGGAACAATGCCACCTGGTATTG...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATTATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTATTGGAAACAATGACTaGCATATCCAGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPIGNND*HIQLID
Trigger: GTCAATCAGCTGGATATGCAAGTCATTGTTTCCAAT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTCTTTGTACACTCAGCTaGACGTACTTTAAACTGTCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLCTLS*TYFKLS
Trigger: AGACAGTTTAAAGTACGTCAAGCTGAGTGTACAAAG...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAGAGAAGGAAAAGAATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPREGKE*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATTCTTTTCCTTCTCT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000395430.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTTATTTCCCCTGCTTaGTTGAAAATGGTAGAGAAG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVISPA*LKMVEK
Trigger: CTTCTCTACCATTTTCAACAAAGCAGGGGAAATAAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTTGTAAGCAATGGATaGCTGCTACCTCTTTTGTTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVVSNG*LLPLLF
Trigger: AAACAAAAGAGGTAGCAGCAATCCATTGCTTACAAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGGAAAAGATTATGCATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPGKDYA*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGCATAATCTTTTCC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000361849.7
ENST00000373957.7
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGGGAAAAGATTATGCATaGAGCTGTCTCCAAGTTCTT +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMGKDYA*SCLQVL
Trigger: AAGAACTTGGAGACAGCTCAATGCATAATCTTTTCC...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448885.5
CDS-3UTR CAA 90 bp TCGATGGTCATTAAGTCACAAATGTCCTATGTCACTCTGACCATATTTTCTCATCGATCAACAACTAACTaGATCATTCTTTTTCTTGCC +
Preference number: 5 (lower is better)
Translates to: SMVIKSQMSYVTLTIFSHRSTTN*IILFLA
Trigger: GGCAAGAAAAAGAATGATCAAGTTAGTTGTTGATCG...ATGAGAAAATATGGTCAGAGTGACATAGGACATTTGTGACTTAATGACCATCGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CAGAAAATGTCTTCCCTCGAGAGTCAATATTCAATTACTTCTGGCTCTATGATAAAATTGGTCACAGTTTaGTCATTGGTATATGGAGGT +
Preference number: 5 (lower is better)
Translates to: QKMSSLESQYSITSGSMIKLVTV*SLVYGG
Trigger: ACCTCCATATACCAATGACAAAACTGTGACCAATTT...TATCATAGAGCCAGAAGTAATTGAATATTGACTCTCGAGGGAAGACATTTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp GTAAGTCCTCAACATTATTTTGAACCTATCCTTCAGCCTTATCGCTGTGTAATTGACCAAATATTTGGTTaGGTTGCTCTGTGTAAATTC +
Preference number: 5 (lower is better)
Translates to: VSPQHYFEPILQPYRCVIDQIFG*VALCKF
Trigger: GAATTTACACAGAGCAACCAAACCAAATATTTGGTC...AATTACACAGCGATAAGGCTGAAGGATAGGTTCAAAATAATGTTGAGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373965.6
ENST00000644397.2
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTTGCAATCCTCATATaGCCAGTCATCATCATACTG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPFAILI*PVIIIL
Trigger: CAGTATGATGATGACTGGCAATATGAGGATTGCAAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373957.7
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCATCTTCTATGTCCTaGTCCAGAGCTACTATTCTT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHSSSMS*SRATIL
Trigger: AAGAATAGTAGCTCTGGACAAGGACATAGAAGATGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395440.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp GACTACTTTTGCTGTCTTGTGATTCGGTCATTTATGAGTGTTAAGGATTTTTCTTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: DYFCCLVIRSFMSVKDFSSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...AGAAAAATCCTTAACACTCATAAATGACCGAATCACAAGACAGCAAAAGTAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373955.5
CDS-3UTR CAA 90 bp CTGATCATAAGTCATATCAAAATCTTGATCAATTTCCTCCCTTTCAAGTGTCACTCACTCAAAGCTGATTaGCGGTTTAAAGTTTCATCT +
Preference number: 5 (lower is better)
Translates to: LIISHIKILINFLPFKCHSLKAD*RFKVSS
Trigger: AGATGAAACTTTAAACCGCAAATCAGCTTTGAGTGA...GTGACACTTGAAAGGGAGGAAATTGATCAAGATTTTGATATGACTTATGATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000617271.4
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTATACTTTAGCTGTATaGCTTTTTGAAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPYTLAV*LFEGTR
Trigger: CCGAGTTCCTTCAAAAAGCAATACAGCTAAAGTATA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp ATAGTCGTCAGTTGCAATAACTTGAAACTTGAAGTAGGATCTCCTCATATTATGAAGAGCATAGCAGTTTaGATAAGCCCTGTATATGTT +
Preference number: 5 (lower is better)
Translates to: IVVSCNNLKLEVGSPHIMKSIAV*ISPVYV
Trigger: AACATATACAGGGCTTATCAAAACTGCTATGCTCTT...CATAATATGAGGAGATCCTACTTCAAGTTTCAAGTTATTGCAACTGACGACTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373956.7
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTGTCAGTTGCAATAACTaGAAACTTGAAGTAGGATCT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPVSCNN*KLEVGS
Trigger: AGATCCTACTTCAAGTTTCAAGTTATTGCAACTGAC...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTACATTAGGTTCTGATTaGAGTTCCACAGTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPTLGSD*SSTVLE
Trigger: TTCAAGAACTGTGGAACTCAAATCAGAACCTAATGT...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS-3UTR CAA 90 bp CTACGATCAAAAACTAAATGTAAATGTTACTGCATCCACATGATAGACATGCCTTTGTTCAAACTCCCCTaGTTTTGTTCAGATGTGATT +
Preference number: 5 (lower is better)
Translates to: LRSKTKCKCYCIHMIDMPLFKLP*FCSDVI
Trigger: AATCACATCTGAACAAAACAAGGGGAGTTTGAACAA...AGGCATGTCTATCATGTGGATGCAGTAACATTTACATTTAGTTTTTGATCGTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000395430.5
ENST00000395433.5
ENST00000437009.5
ENST00000448885.5
CDS GCA 72 bp CCCCGTGCTTCGCTCTGCAGGAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTAAGTCCGCCCGACTAT +
Preference number: 6 (lower is better)
Translates to: PRASLCRRSIIR*LDRECVSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGCACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437009.5
CDS CAA 72 bp GGCCCTCCCAGTCGAACAGGGGAAGCAACTTTTAAGTaGTCCGTGAGGCAGGCACGGCGGGTTCTCACCACA +
Preference number: 6 (lower is better)
Translates to: GPPSRTGEATFK*SVRQARRVLTT
Trigger: TGTGGTGAGAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAGTTGCTTCCCCTGTTCGACTGGGAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 90 bp GCAGATGGAGTTCCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGTCCGCCCGACTATCATTTCCACCCC +
Preference number: 6 (lower is better)
Translates to: ADGVPSLCRRSIIRC*DRECVSPPDYHFHP
Trigger: GGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp GCTCTGCAGGAGGAGCATTATCCGCTGCTTGGACCGTaGGTGCGTAAGTCCGCCCGACTATCATTTCCACCC +
Preference number: 6 (lower is better)
Translates to: ALQEEHYPLLGP*VRKSARLSFPP
Trigger: GGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 72 bp TGCAGGAGGAGCATTATCCGCTGCTTGGACCGTGAGTaGGTAAGTCCGCCCGACTATCATTTCCACCCCTGG +
Preference number: 6 (lower is better)
Translates to: CRRSIIRCLDRE*VSPPDYHFHPW
Trigger: CCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 72 bp GGAGTTCCTTCGCTCTGCAGGAGGAGCATTATCCGCTaGTTGGACCGTGAGTGCGTAAGTCCGCCCGACTAT +
Preference number: 6 (lower is better)
Translates to: GVPSLCRRSIIR*LDRECVSPPDY
Trigger: ATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGGAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp CGTGCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGTCCGCCCGACTATCAT +
Preference number: 6 (lower is better)
Translates to: RASLCRRSIIRC*DRECVSPPDYH
Trigger: ATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437009.5
CDS CAA 72 bp GTTCCTTCGCTCTGCAGGAGGAGCATTATCCGCTGCTaGGACCGTGAGTGCGTAAGTCCGCCCGACTATCAT +
Preference number: 6 (lower is better)
Translates to: VPSLCRRSIIRC*DRECVSPPDYH
Trigger: ATGATAGTCGGGCGGACTTACGCACTCACGGTCCAAGCAGCGGATAATGCTCCTCCTGCAGAGCGAAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp CCAGTCGAACAGGGGAAGCAACTTTTAAGTTGTCCGTaGGGCAGGCACGGCGGGTTCTCACCACAGAACCAT +
Preference number: 6 (lower is better)
Translates to: PVEQGKQLLSCP*GRHGGFSPQNH
Trigger: ATGGTTCTGTGGTGAGAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAGTTGCTTCCCCTGTTCGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 90 bp TTCTTAAAGGGCCCTCCCAGTCGAACAGGGGAAGCAACTTTTAAGTaGTCCGTGAGGCAGGCACGGCGGGTTCTCACCACAGAACCATTC +
Preference number: 6 (lower is better)
Translates to: FLKGPPSRTGEATFK*SVRQARRVLTTEPF
Trigger: GAATGGTTCTGTGGTGAGAACCCGCCGTGCCTGCCTCACGGACAACTTAAAAGTTGCTTCCCCTGTTCGACTGGGAGGGCCCTTTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 90 bp CCGGCGAGCTCCAATGGACTCCACTACGACCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATCCAAGATCCGGAGTTCTCAACTCAG +
Preference number: 6 (lower is better)
Translates to: PASSNGLHYDLGTRN*FLNIAIQDPEFSTQ
Trigger: CTGAGTTGAGAACTCCGGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGAGCTCGCCGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS CAA 72 bp GGGTCTGGTCCTCCAGCAGTCCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCATCATCATACTGGCCC +
Preference number: 6 (lower is better)
Translates to: GSGPPAVPLISM*STRIVPSSYWP
Trigger: GGGCCAGTATGATGATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395433.5
ENST00000613346.4
CDS TCA 72 bp GTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCAGAATTGTACCATTCC +
Preference number: 6 (lower is better)
Translates to: VLWWGLVLQQSL*SACCPPELYHS
Trigger: GGAATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp CCGGAGTTCTCAACTCAGGTATGGCAGCTTGATAAGTaGGTGGACGGCAATCACGAGTGTTTGGCACAAGGA +
Preference number: 6 (lower is better)
Translates to: PEFSTQVWQLDK*VDGNHECLAQG
Trigger: TCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 90 bp AATGGGGTTCAGTTCTTCCGGAGTTCTCAACTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCAATCACGAGTGTTTGGCACAAGGAC +
Preference number: 6 (lower is better)
Translates to: NGVQFFRSSQLRYGS*ISEWTAITSVWHKD
Trigger: GTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGAAGAACTGAACCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp CCCAACAAGGATGGAATAGAGGATTCCTGGCCTATCTaGTGGCGGTTGAATATTCCGGTCCTGATCAATGGC +
Preference number: 6 (lower is better)
Translates to: PNKDGIEDSWPI*WRLNIPVLING
Trigger: GCCATTGATCAGGACCGGAATATTCAACCGCCATCAGATAGGCCAGGAATCCTCTATTCCATCCTTGTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp AGCCCCAACAAGGATTTCATATGTGATCTCCCCATTTaGCCCTTCGTCTGCGTCGACTGCAGTGAGCTGTAT +
Preference number: 6 (lower is better)
Translates to: SPNKDFICDLPI*PFVCVDCSELY
Trigger: ATACAGCTCACTGCAGTCGACGCAGACGAAGGGTCAAATGGGGAGATCACATATGAAATCCTTGTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp GTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTTaGTCAGCATGTTGTCCACCAGAATTGTACCATCAT +
Preference number: 6 (lower is better)
Translates to: VLWWGLVLQQSL*SACCPPELYHH
Trigger: ATGATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395433.5
ENST00000613346.4
CDS CCA 72 bp GAGTGCGTAAGTCCGCCCGACTATCATTTCCACCCCTaGAGCGATGGTGATAAGCCCTGTTGTTTTATTGAT +
Preference number: 6 (lower is better)
Translates to: ECVSPPDYHFHP*SDGDKPCCFID
Trigger: ATCAATAAAACAACAGGGCTTATCACCATCGCTCCAGGGGTGGAAATGATAGTCGGGCGGACTTACGCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp GGGTCTGGTCCTCCAGCAGTCCCTTTGATCAGCATGTaGTCCACCAGAATTGTACCATTCCGACTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GSGPPAVPLISM*STRIVPFRLSS
Trigger: TGAAGAAAGTCGGAATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 72 bp AGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACCAGAATTGTACCATTC +
Preference number: 6 (lower is better)
Translates to: SSMVGSGPPAVP*ISMLSTRIVPF
Trigger: GAATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 72 bp CAGTTCTTCCGGAGTTCTCAACTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCAATCACGAGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: QFFRSSQLRYGS*ISEWTAITSVW
Trigger: CCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 72 bp AGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACCAGAATTGTACCATCA +
Preference number: 6 (lower is better)
Translates to: SSMVGSGPPAVP*ISMLSTRIVPS
Trigger: TGATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395433.5
ENST00000613346.4
CDS CAA 72 bp TCCAAGATCCGGAGTTCTCAACTCAGGTATGGCAGCTaGATAAGTGAGTGGACGGCAATCACGAGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: SKIRSSQLRYGS*ISEWTAITSVW
Trigger: CCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACTCCGGATCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS CAA 72 bp TCCAATGGACTCCACTACGACCTTGGCACCAGGAATTaGTTCCTGAACATAGCGATCCAAGATCCGGAGTTC +
Preference number: 6 (lower is better)
Translates to: SNGLHYDLGTRN*FLNIAIQDPEF
Trigger: GAACTCCGGATCTTGGATCGCTATGTTCAGGAACAAATTCCTGGTGCCAAGGTCGTAGTGGAGTCCATTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414367.5
CDS TCA 72 bp CCAGCTGGTGGTAACAATCGACGGCGACTCCCATATTaGGGCATTTCATACTTATGCATTGAGCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: PAGGNNRRRLPY*GISYLCIELSP
Trigger: TGGAGACAGCTCAATGCATAAGTATGAAATGCCTCAATATGGGAGTCGCCGTCGATTGTTACCACCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373965.6
ENST00000613657.5
ENST00000621708.4
CDS TCA 72 bp TTTAAGAAGAGAGGGCCTCAGCAGTTGCTGTTGCTCTaGTCCATAACCTCTCCTTGTCAGAGTCCGCCAAAT +
Preference number: 6 (lower is better)
Translates to: FKKRGPQQLLLL*SITSPCQSPPN
Trigger: ATTTGGCGGACTCTGACAAGGAGAGGTTATGGATCAGAGCAACAGCAACTGCTGAGGCCCTCTCTTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642496.1
ENST00000644397.2
CDS CCA 72 bp AGTTCTCAACTCAGGTATGGCAGCTTGATAAGTGAGTaGACGGCAATCACGAGTGTTTGGCACAAGGACACA +
Preference number: 6 (lower is better)
Translates to: SSQLRYGSLISE*TAITSVWHKDT
Trigger: TGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCTGCCATACCTGAGTTGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 72 bp CGGTTGAATATTCCGGTCCTGATCAATGGCTTGGATTaGTGGCGTAACAATAATGGGGTTCAGTTCTTCCGG +
Preference number: 6 (lower is better)
Translates to: RLNIPVLINGLD*WRNNNGVQFFR
Trigger: CCGGAAGAACTGAACCCCATTATTGTTACGCCACCAATCCAAGCCATTGATCAGGACCGGAATATTCAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 72 bp GCAACTATGGTAGCTGGTGGTCCTCCCCTAGCTAGTTaGCAATCCTCATATTGCCAGTCATCATCATACTGG +
Preference number: 6 (lower is better)
Translates to: ATMVAGGPPLAS*QSSYCQSSSYW
Trigger: CCAGTATGATGATGACTGGCAATATGAGGATTGCAAACTAGCTAGGGGAGGACCACCAGCTACCATAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373957.7
ENST00000613657.5
ENST00000621708.4
CDS CAA 90 bp TCATCAATAGCAACTATGGTAGCTGGTGGTCCTCCCCTAGCTAGTTaGCAATCCTCATATTGCCAGTCATCATCATACTGGCCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: SSIATMVAGGPPLAS*QSSYCQSSSYWPKQ
Trigger: CTGCTTGGGCCAGTATGATGATGACTGGCAATATGAGGATTGCAAACTAGCTAGGGGAGGACCACCAGCTACCATAGTTGCTATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373957.7
ENST00000613657.5
ENST00000621708.4
CDS TCA 72 bp CACTGTGGCATAGTAGCTTTCATGCTTGAAAGTGGGTaGGTTGTCATTCCTGTCTCTCACCACTATTCGCAC +
Preference number: 6 (lower is better)
Translates to: HCGIVAFMLESG*VVIPVSHHYSH
Trigger: GTGCGAATAGTGGTGAGAGACAGGAATGACAACTCACCCACTTTCAAGCATGAAAGCTACTATGCCACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp GTAGCGAGTAATACCAGTCTGTGTGACGGTGAAGACTaGGGTGTAGTCATTCAGAAAAAGGTGAAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: VASNTSLCDGED*GVVIQKKVKLW
Trigger: CCAGAGCTTCACCTTTTTCTGAATGACTACACCTCAGTCTTCACCGTCACACAGACTGGTATTACTCGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp TTTAAGAAGAGAGGGCCTCAGCAGTTGCTGTTGCTCTaGTCCATAACCTCTCTGTCTGTAGCTGACCAAAAC +
Preference number: 6 (lower is better)
Translates to: FKKRGPQQLLLL*SITSLSVADQN
Trigger: GTTTTGGTCAGCTACAGACAGAGAGGTTATGGATCAGAGCAACAGCAACTGCTGAGGCCCTCTCTTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495484.5
CDS GCA 72 bp TGTTCTTACTGTCAATCATGGACTCCTGTTCAACTGTaGTTTTCAGCCTGTTCCTTAGTGGCTTCACCGCTG +
Preference number: 6 (lower is better)
Translates to: CSYCQSWTPVQL*FSACSLVASPL
Trigger: CAGCGGTGAAGCCACTAAGGAACAGGCTGAAAAGCACAGTTGAACAGGAGTCCATGATTGACAGTAAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 72 bp ACGAGTGTTTGGCACAAGGACACAAGGAAGAAACATTaGACCCAAGTCATCTCCATCCAGAACATCCACTGT +
Preference number: 6 (lower is better)
Translates to: TSVWHKDTRKKH*TQVISIQNIHC
Trigger: ACAGTGGATGTTCTGGATGGAGATGACTTGGGTCCAATGTTTCTTCCTTGTGTCCTTGTGCCAAACACTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 72 bp AGCTTGATAAGTGAGTGGACGGCAATCACGAGTGTTTaGCACAAGGACACAAGGAAGAAACATTGGACCCAA +
Preference number: 6 (lower is better)
Translates to: SLISEWTAITSV*HKDTRKKHWTQ
Trigger: TTGGGTCCAATGTTTCTTCCTTGTGTCCTTGTGCCAAACACTCGTGATTGCCGTCCACTCACTTATCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 72 bp GTGAAGCTCTGGGTCTTTTGTAGGAACTCCACTGGGTaGAACATCTTCTATGTCCTTGTCCAGAGCTACTAT +
Preference number: 6 (lower is better)
Translates to: VKLWVFCRNSTG*NIFYVLVQSYY
Trigger: ATAGTAGCTCTGGACAAGGACATAGAAGATGTTCCACCCAGTGGAGTTCCTACAAAAGACCCAGAGCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395445.6
ENST00000409834.5
ENST00000613657.5
CDS CAA 90 bp TTTAAAGAAAGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACCAGAATTGTACCATTCCGACTTTCT +
Preference number: 6 (lower is better)
Translates to: FKESSMVGSGPPAVP*ISMLSTRIVPFRLS
Trigger: AGAAAGTCGGAATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACTTTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 90 bp TTTAAAGAAAGTTCTATGGTGGGGTCTGGTCCTCCAGCAGTCCCTTaGATCAGCATGTTGTCCACCAGAATTGTACCATCATCATACTGG +
Preference number: 6 (lower is better)
Translates to: FKESSMVGSGPPAVP*ISMLSTRIVPSSYW
Trigger: CCAGTATGATGATGGTACAATTCTGGTGGACAACATGCTGATCAAAGGGACTGCTGGAGGACCAGACCCCACCATAGAACTTTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395433.5
ENST00000613346.4
CDS TCA 72 bp ACTGGCCCAAGCAGATTTCAAAGAGAGAGCCCAGGATaGTCCCTGAAGCTAAACATGTCCAGAGATAAAACT +
Preference number: 6 (lower is better)
Translates to: TGPSRFQRESPG*SLKLNMSRDKT
Trigger: AGTTTTATCTCTGGACATGTTTAGCTTCAGGGATCATCCTGGGCTCTCTCTTTGAAATCTGCTTGGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000458638.1
ENST00000613346.4
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp AGGCTATACATCAGCTGTGGGAAGCGAGGAGGGCTTTaGTTATTTGGTGGAAGCACTTCAATATACACAGTG +
Preference number: 6 (lower is better)
Translates to: RLYISCGKRGGL*LFGGSTSIYTV
Trigger: CACTGTGTATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 72 bp TACCATCATTCTCCACGTTCTGAGATGTATGCCACCTaGCTTAGTTACCACAAGCAACTAACACTAAGCTGC +
Preference number: 6 (lower is better)
Translates to: YHHSPRSEMYAT*LSYHKQLTLSC
Trigger: GCAGCTTAGTGTTAGTTGCTTGTGGTAACTAAGGCAGGTGGCATACATCTCAGAACGTGGAGAATGATGGTA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000361849.7
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
CDS CCA 72 bp TTGAATATTCCGGTCCTGATCAATGGCTTGGATTGGTaGCGTAACAATAATGGGGTTCAGTTCTTCCGGAGT +
Preference number: 6 (lower is better)
Translates to: LNIPVLINGLDW*RNNNGVQFFRS
Trigger: ACTCCGGAAGAACTGAACCCCATTATTGTTACGCCACCAATCCAAGCCATTGATCAGGACCGGAATATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 72 bp CATGGCTTCACTAATTTCAAGGCTATACATCAGCTGTaGGAAGCGAGGAGGGCTTTGATTATTTGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: HGFTNFKAIHQL*EARRALIIWWK
Trigger: CTTCCACCAAATAATCAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGCCTTGAAATTAGTGAAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 72 bp AGTTTGCAATCCTCATATTGCCAGTCATCATCATACTaGCCCAAGCAGATTTCAAAGAGAGAGCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: SLQSSYCQSSSY*PKQISKREPRM
Trigger: CATCCTGGGCTCTCTCTTTGAAATCTGCTTGGGCCAGTATGATGATGACTGGCAATATGAGGATTGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373957.7
ENST00000613657.5
ENST00000621708.4
CDS TCA 72 bp GGAGGCACATTGGAAACAATGACTTGCATATCCAGCTaGTTGACCACGGAGACTTGCGGTTTAAAGTTTCAT +
Preference number: 6 (lower is better)
Translates to: GGTLETMTCISS*LTTETCGLKFH
Trigger: ATGAAACTTTAAACCGCAAGTCTCCGTGGTCAATCAGCTGGATATGCAAGTCATTGTTTCCAATGTGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495484.5
CDS TCA 72 bp CCTCTAGGTCTGTCAACTTCAACTGTTTCTAGGGAATaGTGTTTCCATTTTCCTCCAGGCTCCAGTAAGCAA +
Preference number: 6 (lower is better)
Translates to: PLGLSTSTVSRE*CFHFPPGSSKQ
Trigger: TTGCTTACTGGAGCCTGGAGGAAAATGGAAACATCATTCCCTAGAAACAGTTGAAGTTGACAGACCTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613346.4
CDS GCA 72 bp AAAGTCTCTGTTTACTGGCTCCAGGAGACTAAGTTCTaGTGTCCTAGGATGCATATGGAAAAATCGTGGGTA +
Preference number: 6 (lower is better)
Translates to: KVSVYWLQETKF*CPRMHMEKSWV
Trigger: TACCCACGATTTTTCCATATGCATCCTAGGACAGCAGAACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS GCA 72 bp TTTGATTATTTGGTGGAAGCACTTCAATATACACAGTaGAGATGGAGTTCCTTCGCTCTGCAGGAGGAGCAT +
Preference number: 6 (lower is better)
Translates to: FDYLVEALQYTQ*RWSSFALQEEH
Trigger: ATGCTCCTCCTGCAGAGCGAAGGAACTCCATCTGCACTGTGTATATTGAAGTGCTTCCACCAAATAATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp GGTTGCTCCCACTGGGGCAGATTCCAGGATATAGCCTaGATAACTGGGCATTGTAAAATATGGACTTTGATT +
Preference number: 6 (lower is better)
Translates to: GCSHWGRFQDIA*ITGHCKIWTLI
Trigger: AATCAAAGTCCATATTTTACAATGCCCAGTTATCAAGGCTATATCCTGGAATCTGCCCCAGTGGGAGCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp AAGGCTATACATCAGCTGTGGGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCACTTCAATATACACAGT +
Preference number: 6 (lower is better)
Translates to: KAIHQLWEARRA*IIWWKHFNIHS
Trigger: ACTGTGTATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 90 bp ACTAATTTCAAGGCTATACATCAGCTGTGGGAAGCGAGGAGGGCTTaGATTATTTGGTGGAAGCACTTCAATATACACAGTGCAGATGGA +
Preference number: 6 (lower is better)
Translates to: TNFKAIHQLWEARRA*IIWWKHFNIHSADG
Trigger: TCCATCTGCACTGTGTATATTGAAGTGCTTCCACCAAATAATCAAAGCCCTCCTCGCTTCCCACAGCTGATGTATAGCCTTGAAATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp GGGAAGGTTGGCGTGTTATCATTTGCATCCATCACTTaGATATTGACGATGACTGGCTCACTTTCTTGTACA +
Preference number: 6 (lower is better)
Translates to: GKVGVLSFASIT*ILTMTGSLSCT
Trigger: TGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 72 bp AACCAAATCAAATTTCTGGTGAAAGTCTCTGTTTACTaGCTCCAGGAGACTAAGTTCTGCTGTCCTAGGATG +
Preference number: 6 (lower is better)
Translates to: NQIKFLVKVSVY*LQETKFCCPRM
Trigger: CATCCTAGGACAGCAGAACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTTCACCAGAAATTTGATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 72 bp CTCTCTGAGGATCTCCATTCTCAATGGCATATGTTATaGAGTCTCCCTCTCGATCAGTTGCCTGTAGATTTA +
Preference number: 6 (lower is better)
Translates to: LSEDLHSQWHML*SLPLDQLPVDL
Trigger: TAAATCTACAGGCAACTGATCGAGAGGGAGACTCAATAACATATGCCATTGAGAATGGAGATCCTCAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 90 bp GTCCATGTAAGATTATGCAGCAAGTTTTCTTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGAACCAGTGCTCATAATCTAGTTCCA +
Preference number: 6 (lower is better)
Translates to: VHVRLCSKFSCQGCL*HIPLKRTSAHNLVP
Trigger: TGGAACTAGATTATGAGCACTGGTTCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCATAATCTTACATGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp ACTGTGTGTGGTCACTATGAAATTCCAAAGCCTCCTTaGTGTTCTTACTGTCAATCATGGACTCCTGTTCAA +
Preference number: 6 (lower is better)
Translates to: TVCGHYEIPKPP*CSYCQSWTPVQ
Trigger: TTGAACAGGAGTCCATGATTGACAGTAAGAACATCAAGGAGGCTTTGGAATTTCATAGTGACCACACACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373965.6
ENST00000495484.5
ENST00000616114.4
ENST00000618301.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS GCA 72 bp ATAGGATATTTCAGGGAAGGTTGGCGTGTTATCATTTaGATCCATCACTTGAATATTGACGATGACTGGCTC +
Preference number: 6 (lower is better)
Translates to: IGYFREGWRVII*IHHLNIDDDWL
Trigger: GAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp AGATTATGCAGCAAGTTTTCTTGCCAAGGCTGCCTCTaGCACATCCCTTTAAAAAGAACCAGTGCTCATAAT +
Preference number: 6 (lower is better)
Translates to: RLCSKFSCQGCL*HIPLKRTSAHN
Trigger: ATTATGAGCACTGGTTCTTTTTAAAGGGATGTGCAAGAGGCAGCCTTGGCAAGAAAACTTGCTGCATAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 90 bp TACTCTATCTGTCCATTTGGTCCATCATCTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTGAATATTGTGGTACCAACTGGAGTG +
Preference number: 6 (lower is better)
Translates to: YSICPFGPSSISVAP*SPENPVNIVVPTGV
Trigger: CACTCCAGTTGGTACCACAATATTCACAGGATTTTCAGGAGACAATGGAGCTACAGATATAGATGATGGACCAAATGGACAGATAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CAA 90 bp GGATATTTCAGGGAAGGTTGGCGTGTTATCATTTGCATCCATCACTaGAATATTGACGATGACTGGCTCACTTTCTTGTACACCATCAAA +
Preference number: 6 (lower is better)
Translates to: GYFREGWRVIICIHH*NIDDDWLTFLYTIK
Trigger: TTTGATGGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp TGTCCATTTGGTCCATCATCTATATCTGTAGCTCCATaGTCTCCTGAAAATCCTGTGAATATTGTGGTACCA +
Preference number: 6 (lower is better)
Translates to: CPFGPSSISVAP*SPENPVNIVVP
Trigger: TGGTACCACAATATTCACAGGATTTTCAGGAGACAATGGAGCTACAGATATAGATGATGGACCAAATGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp AAGGTGTCATTGGATGTCGGATCATCTGGATTATACTaGATAACATACTCTATCTGTCCATTTGGTCCATCA +
Preference number: 6 (lower is better)
Translates to: KVSLDVGSSGLY*ITYSICPFGPS
Trigger: TGATGGACCAAATGGACAGATAGAGTATGTTATTCAGTATAATCCAGATGATCCGACATCCAATGACACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp TCTTGTTCAGCCTTAATAACCAAATCAAATTTCTGGTaGAAGTCTCTGTTTACTGGCTCCAGGAGACTAAGT +
Preference number: 6 (lower is better)
Translates to: SCSALITKSNFW*KSLFTGSRRLS
Trigger: ACTTAGTCTCCTGGAGCCAGTAAACAGAGACTTTCACCAGAAATTTGATTTGGTTATTAAGGCTGAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395445.6
ENST00000395446.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS TCA 72 bp CTTATTTGCAGGTCTTTGGAATGGTATTTCGAAACATaGCAATGCAAATTCCCTAGTGTCGTGTCCTTTTGT +
Preference number: 6 (lower is better)
Translates to: LICRSLEWYFET*QCKFPSVVSFC
Trigger: ACAAAAGGACACGACACTAGGGAATTTGCATTGTCATGTTTCGAAATACCATTCCAAAGACCTGCAAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458638.1
ENST00000613346.4
CDS CAA 72 bp CATCACTTGAATATTGACGATGACTGGCTCACTTTCTaGTACACCATCAAATGCTGTTATCGAAAAGGTGTA +
Preference number: 6 (lower is better)
Translates to: HHLNIDDDWLTF*YTIKCCYRKGV
Trigger: TACACCTTTTCGATAACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS TCA 72 bp GGAATTATCAAAACAGGAAGATCATGGTTTCACACCTaGATTACTAAAATAATGATCAACCCAGAGCCTCGT +
Preference number: 6 (lower is better)
Translates to: GIIKTGRSWFHT*ITKIMINPEPR
Trigger: ACGAGGCTCTGGGTTGATCATTATTTTAGTAATTCAGGTGTGAAACCATGATCTTCCTGTTTTGATAATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476074.5
CDS CCA 72 bp ATCATTTGCATCCATCACTTGAATATTGACGATGACTaGCTCACTTTCTTGTACACCATCAAATGCTGTTAT +
Preference number: 6 (lower is better)
Translates to: IICIHHLNIDDD*LTFLYTIKCCY
Trigger: ATAACAGCATTTGATGGTGTACAAGAAAGTGAGCCAGTCATCGTCAATATTCAAGTGATGGATGCAAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CAA 72 bp TCATTCACATGTTCCACCTCTTGTTTCTGTGAGGCATaGATATCCACTCTCATATCATCAAGAAAATGTTAC +
Preference number: 6 (lower is better)
Translates to: SFTCSTSCFCEA*ISTLISSRKCY
Trigger: GTAACATTTTCTTGATGATATGAGAGTGGATATCAATGCCTCACAGAAACAAGAGGTGGAACATGTGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395442.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000414367.5
ENST00000437009.5
ENST00000448885.5
ENST00000495484.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000644397.2
CDS CCA 72 bp CAGGATATAGCCTTGATAACTGGGCATTGTAAAATATaGACTTTGATTGTTTTCATCCAGTATTTCAATGTG +
Preference number: 6 (lower is better)
Translates to: QDIALITGHCKI*TLIVFIQYFNV
Trigger: CACATTGAAATACTGGATGAAAACAATCAAAGTCCATATTTTACAATGCCCAGTTATCAAGGCTATATCCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395440.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2
CDS CCA 72 bp ATAAACATACACATCATAGGATATTTCAGGGAAGGTTaGCGTGTTATCATTTGCATCCATCACTTGAATATT +
Preference number: 6 (lower is better)
Translates to: INIHIIGYFREG*RVIICIHHLNI
Trigger: AATATTCAAGTGATGGATGCAAATGATAACACGCCAACCTTCCCTGAAATATCCTATGATGTGTATGTTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000320301.11
ENST00000361849.7
ENST00000373955.5
ENST00000373956.7
ENST00000373957.7
ENST00000373965.6
ENST00000395430.5
ENST00000395433.5
ENST00000395445.6
ENST00000395446.5
ENST00000409834.5
ENST00000437009.5
ENST00000448885.5
ENST00000613657.5
ENST00000616114.4
ENST00000617271.4
ENST00000621708.4
ENST00000642496.1
ENST00000644397.2