Pregenerated sensors for PCDH11X (Homo sapiens)

Ensembl gene IDs: ENSG00000102290

Ensembl transcript IDs: ENST00000504220.6

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AAGGGTCATGGCAGAAGGGGAAGAGGAAGTAAGCACAGTCTTTCCTaGCACTTTCCCTTCAGATTTCCGCTGTGGTTGGGGATGAATCCA	+
Preference number: 5 (lower is better) Translates to: KGHGRRGRGSKHSLS*HFPFRFPLWLGMNP Trigger: TGGATTCATCCCCAACCACAGCGGAAATCTGAAGGGAAAGTGGCAGGAAAGACTGTGCTTACTTCCTCTTCCCCTTCTGCCATGACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504220.6
CDS TCA 72 bp	GAACAGTTATTTCTGCAGCTTTCTTTAGTCCAGGTATaGAAGGGTCATGGCAGAAGGGGAAGAGGAAGTAAG	+
Preference number: 6 (lower is better) Translates to: EQLFLQLSLVQV*KGHGRRGRGSK Trigger: CTTACTTCCTCTTCCCCTTCTGCCATGACCCTTTCATACCTGGACTAAAGAAAGCTGCAGAAATAACTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504220.6

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