RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCDH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000156453

Ensembl transcript IDs: ENST00000287008.8, ENST00000357517.6, ENST00000394536.4, ENST00000503492.5, ENST00000505937.2, ENST00000514773.1, ENST00000515351.1

Found 878 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGGCCGGCCGGCCAGTAGGGGGCTCACAGGTAGATCTCGCGCTTaGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCG +
Preference number: 1 (lower is better)
Translates to: GGRPASRGLTGRSRA*PSGQMPVWLRVGSP
Trigger: CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTACTGGCCGGCCGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR GCA 90 bp GTAGGGGGCTCACAGGTAGATCTCGCGCTTGGCCGTCTGGGCAGATaGCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGGGG +
Preference number: 1 (lower is better)
Translates to: VGGSQVDLALGRLGR*RCGCGWEVRGLGQG
Trigger: CCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 90 bp GATCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTaGGAAGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGC +
Preference number: 1 (lower is better)
Translates to: DLALGRLGRCRCGCG*EVRGLGQGDFLQGG
Trigger: GCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 90 bp GCTCCTGCCCTCCTCGGTCCTGGTAAGGCACGAAGGTGGAGAGTTTaGGGGCGCTGCTCTTGGTCCGGCGGCTGGGAGATGACTGGCCAG +
Preference number: 1 (lower is better)
Translates to: APALLGPGKARRWRV*GRCSWSGGWEMTGQ
Trigger: CTGGCCAGTCATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAAACTCTCCACCTTCGTGCCTTACCAGGACCGAGGAGGGCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 90 bp GATGGACCAAGGCTGTGCCATAGCGTGGGGGCTTGCCGCGGTCACTaGCCTTCACCACCAGGCGGTGTAGCCCATGGTGGCGCCGCTCAA +
Preference number: 1 (lower is better)
Translates to: DGPRLCHSVGACRGH*PSPPGGVAHGGAAQ
Trigger: TTGAGCGGCGCCACCATGGGCTACACCGCCTGGTGGTGAAGGTCAGTGACCGCGGCAAGCCCCCACGCTATGGCACAGCCTTGGTCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp AATGGGGGCCCAGATGGGACTAGGCGTGGGCATGTGGCAGGCAGGTaGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCA +
Preference number: 1 (lower is better)
Translates to: NGGPDGTRRGHVAGR*ASPGAARENKASAP
Trigger: TGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCTGCCTGCCACATGCCCACGCCTAGTCCCATCTGGGCCCCCATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR GCA 90 bp CAGGTAGATCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTaGGGGTGGGAAGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAA +
Preference number: 1 (lower is better)
Translates to: QVDLALGRLGRCRCG*GWEVRGLGQGDFLQ
Trigger: TTGGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 90 bp GTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTaGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGAA +
Preference number: 1 (lower is better)
Translates to: VWADAGVAAGGKSEV*VRGISSKVAESLQE
Trigger: TTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 90 bp CTCACAGGTAGATCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTaGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGGGGGATTTCCT +
Preference number: 1 (lower is better)
Translates to: LTGRSRAWPSGQMPV*LRVGSPRSGSGGFP
Trigger: AGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 90 bp TGGCCTCCCGCTGTCTGCAGTAGCGCACAAGAACCGCCAGGGCGATaGGCAAGGCCACGGCCACCACACCAGCCACCACACCAAAGAGAA +
Preference number: 1 (lower is better)
Translates to: WPPAVCSSAQEPPGR*ARPRPPHQPPHQRE
Trigger: TTCTCTTTGGTGTGGTGGCTGGTGTGGTGGCCGTGGCCTTGCTCATCGCCCTGGCGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTaGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: WEKGQRGHEVSDTPT*GPGQEVHAEGVESE
Trigger: CTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 90 bp GGGGGTTGGTGCGGTAGCTGTAGTCGGAGTACTGCTCAGAGCCCGTaGACGTGGTGTCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCA +
Preference number: 1 (lower is better)
Translates to: GGWCGSCSRSTAQSP*TWCPRCPRMCLQVA
Trigger: TGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACTCCGACTACAGCTACCGCACCAACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TCTGGATCCCCAGCAATGTCAATATCCAGCGGCGTGTCCAGGCTGTaGCCCAGGAGGGTCTCCAGCAGCGTGCGGTTGGCCAGAGTCTCA +
Preference number: 1 (lower is better)
Translates to: SGSPAMSISSGVSRL*PRRVSSSVRLARVS
Trigger: TGAGACTCTGGCCAACCGCACGCTGCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCCGCTGGATATTGACATTGCTGGGGATCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TGGTGCGGTAGCTGTAGTCGGAGTACTGCTCAGAGCCCGTGGACGTaGTGTCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: WCGSCSRSTAQSPWT*CPRCPRMCLQVAGP
Trigger: AGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACTCCGACTACAGCTACCGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 90 bp GGCCCAGGAGGGTCTCCAGCAGCGTGCGGTTGGCCAGAGTCTCATTaGCATAAAGATGGACCAAGGCTGTGCCATAGCGTGGGGGCTTGC +
Preference number: 1 (lower is better)
Translates to: GPGGSPAACGWPESH*HKDGPRLCHSVGAC
Trigger: GCAAGCCCCCACGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGCACGCTGCTGGAGACCCTCCTGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp TGTAGTCGGAGTACTGCTCAGAGCCCGTGGACGTGGTGTCCCCGGTaGCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGT +
Preference number: 1 (lower is better)
Translates to: CSRSTAQSPWTWCPR*PRMCLQVAGPVPPG
Trigger: ACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACTCCGACTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTaGCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTC +
Preference number: 1 (lower is better)
Translates to: PALVGHEGNNELEVR*PPLTPPSAQIEGVL
Trigger: GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR GCA 90 bp CCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTaGAGGAATCATGGCTACTGTGGGAGAAGGCACTGTAGGAGGGCA +
Preference number: 1 (lower is better)
Translates to: PRSGSGGFPPRWPSP*RNHGYCGRRHCRRA
Trigger: TGCCCTCCTACAGTGCCTTCTCCCACAGTAGCCATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 90 bp CCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTaGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTT +
Preference number: 1 (lower is better)
Translates to: PTLDSTICPNRGGAP*KSREGAQSLQRSPL
Trigger: AAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 90 bp TTCCCTTGGAGGCCTTGCCACTGGGCTTGGGGGCATACAGGTCCTTaGTCTCCTTCTTACCAGCCTGGTAACCACTTTTGGCCTCCCGCT +
Preference number: 1 (lower is better)
Translates to: FPWRPCHWAWGHTGP*SPSYQPGNHFWPPA
Trigger: AGCGGGAGGCCAAAAGTGGTTACCAGGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 90 bp TTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTaGGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGA +
Preference number: 1 (lower is better)
Translates to: FPIQRCLHLDLSSLG*DGEEALSSRLRLQR
Trigger: TCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 90 bp GGCGGTGTAGCCCATGGTGGCGCCGCTCAATCTCCTTCTCCAGGGTaGTGGCACCTGAATGTGACCCAATCTGGAAGAGTCCATAAGGGT +
Preference number: 1 (lower is better)
Translates to: GGVAHGGAAQSPSPG*WHLNVTQSGRVHKG
Trigger: ACCCTTATGGACTCTTCCAGATTGGGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGATTGAGCGGCGCCACCATGGGCTACACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp AGCATGTGTCAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTaGCTGTCATGGCGACATCAGGCAAAGGGCGAAGGTCTGGCACTC +
Preference number: 1 (lower is better)
Translates to: SMCQSGQTHCTPGYM*LSWRHQAKGEGLAL
Trigger: GAGTGCCAGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTGACACATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR GCA 90 bp GCAAGGCCACGGCCACCACACCAGCCACCACACCAAAGAGAATGTTaGCACGCTGCTTGGAGCGCTCATATTCTGGATCCCCAGCAATGT +
Preference number: 1 (lower is better)
Translates to: ARPRPPHQPPHQREC*HAAWSAHILDPQQC
Trigger: ACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGTGGTGGCCGTGGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TACTTCTTCTTGCTGTCACTGCCTGTCTCACTGGCCTGGCGCAGCTaGAAGGGCACATCACCTGCCACCACACAGGTGACAGCTGCATTC +
Preference number: 1 (lower is better)
Translates to: YFFLLSLPVSLAWRS*KGTSPATTQVTAAF
Trigger: GAATGCAGCTGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTGACAGCAAGAAGAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp CATACAGGTCCTTGGTCTCCTTCTTACCAGCCTGGTAACCACTTTTaGCCTCCCGCTGTCTGCAGTAGCGCACAAGAACCGCCAGGGCGA +
Preference number: 1 (lower is better)
Translates to: HTGPWSPSYQPGNHF*PPAVCSSAQEPPGR
Trigger: TCGCCCTGGCGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCAAAAGTGGTTACCAGGCTGGTAAGAAGGAGACCAAGGACCTGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp GAGGTGGGACGCCACCATCCACTGCCTTCAGCTGGAAGGTGTAGGTaGTTTGTTGCTCTCGATCAAAGCTCAGGCTGGATAGGATGGTGC +
Preference number: 1 (lower is better)
Translates to: EVGRHHPLPSAGRCR*FVALDQSSGWIGWC
Trigger: GCACCATCCTATCCAGCCTGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGGATGGTGGCGTCCCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TGCAGGAAATACTTCTTCTTGCTGTCACTGCCTGTCTCACTGGCCTaGCGCAGCTGGAAGGGCACATCACCTGCCACCACACAGGTGACA +
Preference number: 1 (lower is better)
Translates to: CRKYFFLLSLPVSLA*RSWKGTSPATTQVT
Trigger: TGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 90 bp GCCTGTGCCATTCTGGATAACAAAGTCACCGTTGTCCTGCTCCACTaGGAGCTGCACCTGGGCATTCTCCCCCTTGTCTCCATCAATGAC +
Preference number: 1 (lower is better)
Translates to: ACAILDNKVTVVLLH*ELHLGILPLVSIND
Trigger: GTCATTGATGGAGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAATGGCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp ACGGCCACCACACCAGCCACCACACCAAAGAGAATGTTGCCACGCTaGTTGGAGCGCTCATATTCTGGATCCCCAGCAATGTCAATATCC +
Preference number: 1 (lower is better)
Translates to: TATTPATTPKRMLPR*LERSYSGSPAMSIS
Trigger: GGATATTGACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGTGGTGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp GGGACTTGCTCTTCTTGCCTTTGCTTTTGTTTCCCTTGGAGGCCTTaGCACTGGGCTTGGGGGCATACAGGTCCTTGGTCTCCTTCTTAC +
Preference number: 1 (lower is better)
Translates to: GTCSSCLCFCFPWRP*HWAWGHTGPWSPSY
Trigger: GTAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp TGGATAACAAAGTCACCGTTGTCCTGCTCCACTGAGAGCTGCACCTaGGCATTCTCCCCCTTGTCTCCATCAATGACAGTCACCATGCCC +
Preference number: 1 (lower is better)
Translates to: WITKSPLSCSTESCT*AFSPLSPSMTVTMP
Trigger: GGGCATGGTGACTGTCATTGATGGAGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp CACACCAAAGAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTaGATCCCCAGCAATGTCAATATCCAGCGGCGTGTCCAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: HTKENVATLLGALIF*IPSNVNIQRRVQAV
Trigger: CACAGCCTGGACACGCCGCTGGATATTGACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp CCACCACACCAGCCACCACACCAAAGAGAATGTTGCCACGCTGCTTaGAGCGCTCATATTCTGGATCCCCAGCAATGTCAATATCCAGCG +
Preference number: 1 (lower is better)
Translates to: PPHQPPHQRECCHAA*SAHILDPQQCQYPA
Trigger: CGCTGGATATTGACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 90 bp CCATTCTGGATAACAAAGTCACCGTTGTCCTGCTCCACTGAGAGCTaGACCTGGGCATTCTCCCCCTTGTCTCCATCAATGACAGTCACC +
Preference number: 1 (lower is better)
Translates to: PFWITKSPLSCSTES*TWAFSPLSPSMTVT
Trigger: GGTGACTGTCATTGATGGAGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 90 bp GTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: VFLSSRRRRLTTSGA*WNVYSISALAPWSE
Trigger: CTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR CCA 90 bp TTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCA +
Preference number: 1 (lower is better)
Translates to: FLSSRRRRLTTSGAW*NVYSISALAPWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGGGCAGATGCCGGTGTaGCTGCGGGTGGGAAGTCCG +
Preference number: 2 (lower is better)
Translates to: RWASPGAARENKASAPLPGQMPV*LRVGSP
Trigger: CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 2 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR TCA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCCGGCTGCCACCTGGCTaGCCGTCTCACCAAGACGTG +
Preference number: 2 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCRLPPG*PSHQDV
Trigger: CACGTCTTGGTGAGACGGTCAGCCAGGTGGCAGCCG...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGACCTGGACCCTGCATaGGAGAAGGGCCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: RWASPGAARENKASAPLPDLDPA*EKGQRG
Trigger: ACCACGCTGGCCCTTCTCCCATGCAGGGTCCAGGTC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCACTGCTGGCTCAGGCTaGCCCCCAACACGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSTAGSG*PPTRAG
Trigger: GCCTGCCCGTGTTGGGGGCCAGCCTGAGCCAGCAGT...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394536.4
3UTR-3UTR CCA 90 bp GGGGCCGGCCGGCCAGTAGGGGGCTCACAGGTAGATCTCGCGCTTGGCCGTCTGCAGCATGTGTCAGAGTaGCCAAACTCACTGCACTCC +
Preference number: 2 (lower is better)
Translates to: GAGRPVGGSQVDLALGRLQHVSE*PNSLHS
Trigger: GGAGTGCAGTGAGTTTGGCCACTCTGACACATGCTG...CAGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTACTGGCCGGCCGGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp GTCTCGGGTGAGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGAGGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 2 (lower is better)
Translates to: VSGEMVKRPLAAGSGSREGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...CTCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 90 bp GCTCAGAGCCCGTGGACGTGGTGTCCCCGGTGCCCACGAATGTGTTaGCAGGTGGCAGGTCCTGTACCACCTGGTGCTTCTTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: AQSPWTWCPRCPRMC*QVAGPVPPGASWRL
Trigger: CAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCGACACCAACGTAAGCTaGGCGAGGTGGGACGCCACC +
Preference number: 2 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCDTNVS*ARWDAT
Trigger: GGTGGCGTCCCACCTCGCTCAGCTTACGTTGGTGTC...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGGGGCCATTTGGGAGCTaGCCGGCGGCTGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PTPPLVTKALQGATGGQEGPFGS*PAAGGG
Trigger: CCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCC...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCGGGCCATTTGGGAGCTaGCCGGCGGCTGGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: HAIPALVGHEGNNELEVRGPFGS*PAAGGG
Trigger: CCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCC...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCCTGGAATGGGCCATTTaGGAGCTGGCCGGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGLEWAI*ELAGGW
Trigger: CCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAG...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCTGGAATGGGCCATTTaGGAGCTGGCCGGCGGCTGG +
Preference number: 2 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLLEWAI*ELAGGW
Trigger: CCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAG...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTACTGCTGGCTCAGGCTaGCCCCCAACACGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGTAGSG*PPTRAG
Trigger: GCCTGCCCGTGTTGGGGGCCAGCCTGAGCCAGCAGT...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp TCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGGGATTTCCTCCAAGGTaGCCGAGTCCTTGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SRAWPSGQMPVWLRVGSPGFPPR*PSPCRN
Trigger: ATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCC...CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: TVTTTWARALLGLVPRSLTVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR TCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCGCTGGGAGATGGAAATaGGGGGAGAGGACCTGGACC +
Preference number: 2 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAAGRWK*GERTWT
Trigger: GGTCCAGGTCCTCTCCCCTCATTTCCATCTCCCAGC...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR TCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCAATCCGTGTGCCCGGTaGGGCACTAAGGCCCCACCT +
Preference number: 2 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPNPCAR*GTKAPP
Trigger: AGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATT...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
3UTR-3UTR GCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCAGAGGACCTGGACCCTaGATGGGAGAAGGGCCAGCG +
Preference number: 2 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLRGPGP*MGEGPA
Trigger: CGCTGGCCCTTCTCCCATGCAGGGTCCAGGTCCTCT...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTGAGGCCCTGGAATaGGCCATTTGGGAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: PPSAQIEGVLPGSQGKEPSEALE*AIWELA
Trigger: GGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT...GGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAATCTTGGTCCGGCGGCTaGGAGATGACTGGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAESWSGG*EMTGQA
Trigger: TGCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGA...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR GCA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTACTGAGAAGCGCAGGGTaGTTAGGTCCTCACGGTCCA +
Preference number: 2 (lower is better)
Translates to: TVTTTWARALLGLVPRSLLRSAG*LGPHGP
Trigger: TGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAG...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR CCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGTGATACCCCCACTTaGGGCCCTGGCCAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: ALQGATGGQEFPLGAPRESDTPT*GPGQEV
Trigger: GACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACT...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCCGAGGGGGTGCTCCCTaGAAGTCAAGGGAAGGAGCC +
Preference number: 2 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVRGGAP*KSREGA
Trigger: GGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCG...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 90 bp ATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTT +
Preference number: 2 (lower is better)
Translates to: MSFTVTTTWARALLG*VPRSLASTEKRRVL
Trigger: AAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR TCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGCTGGGAGATGGAAATaGGGGGAGAGGACCTGGACC +
Preference number: 2 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVAGRWK*GERTWT
Trigger: GGTCCAGGTCCTCTCCCCTCATTTCCATCTCCCAGC...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR TCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCTACGCTGCCCACCCTTaGCTCCACCATCTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLYAAHP*LHHLPK
Trigger: TTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTA...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR TCA 90 bp GTTAGAGCGATAGTGGCGGCCCAGGTCAGGGCTGCCTGGTGGGTAGTTGAGGGGATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTG +
Preference number: 2 (lower is better)
Translates to: VRAIVAAQVRAAWWVVEGIGTLV*VIGLHL
Trigger: CAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...CCCCTCAACTACCCACCAGGCAGCCCTGACCTGGGCCGCCACTATCGCTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCAAGGAGCCCAGTCATTaGAGAGGAGCCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: FSPASGLKLGMLSPPWSAKEPSH*RGALLG
Trigger: GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTT...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAACCCAAATCGAGGGGGTaGTCCCTGGAAGTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAEPKSRG*SLEVKG
Trigger: TCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGG...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCGAGTCACTAGCCCTATaGCCCGGATCTCAATGGTGG +
Preference number: 2 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCESLAL*PGSQWW
Trigger: CCACCATTGAGATCCGGGGCATAGGGCTAGTGACTC...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGAGTGATACCCCCACTTaGGGCCCTGGCCAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSSDTPT*GPGQEV
Trigger: GACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACT...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGGCACGGGGGCCGTTTTaGTGTTCCGGTCTTCCGGGG +
Preference number: 2 (lower is better)
Translates to: PTPPLVTKALQGATGGQEARGPF*CSGLPG
Trigger: CCCCGGAAGACCGGAACACCAAAACGGCCCCCGTGC...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp AACACGGGCAGGCACAGTAAACCTGCTCCATCACTCCCACACCTCGGTCCAGATACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: NTGRHSKPAPSLPHLGPDTVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...ATCTGGACCGAGGTGTGGGAGTGATGGAGCAGGTTTACTGTGCCTGCCCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp TTTTGTTTCCCTTGGAGGCCTTGCCACTGGGCTTGGGGGCATACAGGTCCTTGGCCTGTCTCACTGGCCTaGCGCAGCTGGAAGGGCACA +
Preference number: 2 (lower is better)
Translates to: FCFPWRPCHWAWGHTGPWPVSLA*RSWKGT
Trigger: TGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGG...CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp CAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATCTTGACTCCACCATCTaGCCAAATCGAGGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: QPCFRAKIGHAIPALVGHLDSTI*PNRGGA
Trigger: AGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAG...ATGGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAACTCCCGGGTACATGTaGCTGTCATGGCGACATCAG +
Preference number: 2 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAETPGYM*LSWRHQ
Trigger: CTGATGTCGCCATGACAGGCACATGTACCCGGGAGT...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGGACCTGGACCCTGCATaGGAGAAGGGCCAGCGTGGT +
Preference number: 2 (lower is better)
Translates to: PTPPLVTKALQGATGGQEDLDPA*EKGQRG
Trigger: ACCACGCTGGCCCTTCTCCCATGCAGGGTCCAGGTC...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp CAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATCTCTTGGGCATCAGATaGGGGAAGCCCCATAAAGGG +
Preference number: 2 (lower is better)
Translates to: QPCFRAKIGHAIPALVGHLLGIR*GKPHKG
Trigger: CCCTTTATGGGGCTTCCCCCATCTGATGCCCAAGAG...ATGGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 90 bp AGCAAGGCCACGGCCACCACACCAGCCACCACACCAAAGAGAATGTaGCCACGCTGCTTGGAGCGCTCATATTCTGGATCCCCAGCAATG +
Preference number: 2 (lower is better)
Translates to: SKATATTPATTPKRM*PRCLERSYSGSPAM
Trigger: CATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGTGGTGGCCGTGGCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCATACGCTGCCCACCCTTaGCTCCACCATCTGCCCAAA +
Preference number: 2 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASYAAHP*LHHLPK
Trigger: TTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTA...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR TCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTCCGGCGGCTGGGAGATaGCTGGCCAGGCATCCAGCA +
Preference number: 2 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSPAAGR*LARHPA
Trigger: TGCTGGATGCCTGGCCAGTCATCTCCCAGCCGCCGG...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAATGCTATCCCCGCCCTaGTCGGCCATGAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSMLSPP*SAMRET
Trigger: TGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCAT...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 2 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASTSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR CAA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGT +
Preference number: 2 (lower is better)
Translates to: VGHEGNNELEVRCPP*TPPSAQIEGVLPGS
Trigger: ACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 90 bp ACTGGCTTCACGGGCTTTGGGGACTTGCTCTTCTTGCCTTTGCTTTaGTTTCCCTTGGAGGCCTTGCCACTGGGCTTGGGGGCATACAGG +
Preference number: 2 (lower is better)
Translates to: TGFTGFGDLLFLPLL*FPLEALPLGLGAYR
Trigger: CCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCAAGGAGCCCAGTCATTaGAGAGGAGCCCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: HAIPALVGHEGNNELEVRKEPSH*RGALLG
Trigger: GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTT...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGCTTGACTCCACCATCTaGCCAAATCGAGGGGGTGCT +
Preference number: 2 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWLDSTI*PNRGGA
Trigger: AGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAG...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGAGTTAGAAGTACGCTaGCCACCCTTGACTCCACCA +
Preference number: 2 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVELEVR*PPLTPP
Trigger: TGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTC...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGTCAGGGAGCCACTGGTaGTCAAGAGTTTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWSGSHW*SRVSSG
Trigger: CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGA...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGGGTAGATCTCGCGCTTaGCCGTCTGGGCAGATGCCG +
Preference number: 2 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGGRSRA*PSGQMP
Trigger: CGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACC...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp ACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCACTACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 2 (lower is better)
Translates to: TTWARALLGLVPRSLASTTSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...AGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR CCA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 2 (lower is better)
Translates to: TVTTTWARALLGLVPRSLTTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR CAA 90 bp CTGGATAGGATGGTGCCTGTGCCATTCTGGATAACAAAGTCACCGTaGTCCTGCTCCACTGAGAGCTGCACCTGGGCATTCTCCCCCTTG +
Preference number: 2 (lower is better)
Translates to: LDRMVPVPFWITKSP*SCSTESCTWAFSPL
Trigger: CAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAATGGCACAGGCACCATCCTATCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp CACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAGCGGTCCACCGGGCCCTaGACAGTGATAAGTCCAGTG +
Preference number: 2 (lower is better)
Translates to: HCLQLEGVGALLLSIKAQRSTGP*TVISPV
Trigger: CACTGGACTTATCACTGTTCAGGGCCCGGTGGACCG...CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTT +
Preference number: 2 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGIGTLV*VIGLHL
Trigger: AAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
3UTR-3UTR GCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGAGAGGACCTGGACCCTaGATGGGAGAAGGGCCAGCG +
Preference number: 2 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMRGPGP*MGEGPA
Trigger: CGCTGGCCCTTCTCCCATGCAGGGTCCAGGTCCTCT...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR GCA 90 bp TTTTGTTTCCCTTGGAGGCCTTGCCACTGGGCTTGGGGGCATACAGGTCCTTGGCACACAGGTGACAGCTaGATTCTCTCCCTCATCTCG +
Preference number: 2 (lower is better)
Translates to: FCFPWRPCHWAWGHTGPWHTGDS*ILSLIS
Trigger: CGAGATGAGGGAGAGAATGCAGCTGTCACCTGTGTG...CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp GTCTCGGGTGAGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGAGGGAAATACTTCTTCTTaGTGTCACTGCCTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: VSGEMVKRPLAAGSGSREGNTSS*CHCLSH
Trigger: GTGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCC...CTCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCCAAATCAGGCAGAAATaGGGACGTCATTCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: FSPASGLKLGMLSPPWSAQIRQK*GRHSKV
Trigger: GACCTTGGAATGACGTCCCCATTTCTGCCTGATTTG...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
3UTR-3UTR CCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGC +
Preference number: 2 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQYMCLS*RHQAKG
Trigger: GCCCTTTGCCTGATGTCGCCATGACAGGCACATGTA...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CCA 90 bp ACCACACCAAAGAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTGGATCCCGGTGTAGCCCATGGTaGCGCCGCTCAATCTCCTTC +
Preference number: 2 (lower is better)
Translates to: TTPKRMLPRCLERSYSGSRCSPW*RRSISF
Trigger: GAAGGAGATTGAGCGGCGCCACCATGGGCTACACCG...GGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 90 bp GCCACCACACCAGCCACCACACCAAAGAGAATGTTGCCACGCTGCTaGGAGCGCTCATATTCTGGATCCCCAGCAATGTCAATATCCAGC +
Preference number: 2 (lower is better)
Translates to: ATTPATTPKRMLPRC*ERSYSGSPAMSISS
Trigger: GCTGGATATTGACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCATGTGTTTAGAACGGTaGCTGGCACCTAGGCTATTA +
Preference number: 2 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTMCLER*LAPRLL
Trigger: TAATAGCCTAGGTGCCAGGCACCGTTCTAAACACAT...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
3UTR-3UTR GCA 90 bp CCACCACCTTCAACTCATAGCTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCATTGACGTCCACCACCTaGACCTTGAGGGAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: PPPSTHSSPAVPDPEMSSLTSTT*TLRELV
Trigger: CACTAACTCCCTCAAGGTGCAGGTGGTGGACGTCAA...TGAAGACATCTCTGGATCGGGAACAGCGGGAGAGCTATGAGTTGAAGGTGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGCTCTTGGGCATCAGATaGGGGAAGCCCCATAAAGGG +
Preference number: 2 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGLLGIR*GKPHKG
Trigger: CCCTTTATGGGGCTTCCCCCATCTGATGCCCAAGAG...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGGTCAAGAGTTTCCTCTaGGAGCTCCCAGGGAAAGGG +
Preference number: 2 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGVKSFL*ELPGKG
Trigger: CCCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGAC...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CCA 90 bp GCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCATAGCGTGCCCCGGATCTCAATaGTGGGGGCATTGTCATTCA +
Preference number: 2 (lower is better)
Translates to: AVGQSLIDIKMDQGCAIACPGSQ*WGHCHS
Trigger: TGAATGACAATGCCCCCACCATTGAGATCCGGGGCA...CGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp CACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAGACCTCAGTGACACTCTaGGTGAAGACAGGTGCGTTG +
Preference number: 2 (lower is better)
Translates to: HCLQLEGVGALLLSIKAQTSVTL*VKTGAL
Trigger: CAACGCACCTGTCTTCACTCAGAGTGTCACTGAGGT...CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp CTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTCATTGGCCTTCACCTaGTTGGGTGGGCTCCCATTT +
Preference number: 2 (lower is better)
Translates to: LTTSGAWWNVYSISALAPSLAFT*LGGLPF
Trigger: AAATGGGAGCCCACCCAACCAGGTGAAGGCCAATGA...AGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp CCACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAAGTCACCATGCCCACTaGACTCAGTGCTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: PLPSAGRCRCFVALDQSSSHHAH*TQCWHV
Trigger: AACATGCCAGCACTGAGTCCAGTGGGCATGGTGACT...TGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTACTGAGAGCTGCACCTaGGCATTCTCCCCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: LEESIRVATCNAVDQLSITESCT*AFSPLS
Trigger: AGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGT...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR GCA 90 bp GCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCATAGCGAGAGTCCATAAGGGTTaGCACCTGCAATGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: AVGQSLIDIKMDQGCAIARVHKG*HLQCCR
Trigger: TCTACAGCATTGCAGGTGGCAACCCTTATGGACTCT...CGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp GCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 2 (lower is better)
Translates to: ALNSDKSSVPVQSKKTPHTTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...GTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR CCA 90 bp CCACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCACCCGGATCTCAATGGTaGGGGCATTGTCATTCATGT +
Preference number: 2 (lower is better)
Translates to: PLPSAGRCRCFVALDQSSPGSQW*GHCHSC
Trigger: ACATGAATGACAATGCCCCCACCATTGAGATCCGGG...TGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR TCA 90 bp CACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAGCATGTTCTCCATCACTaGGAAGTTGTAGCCACTCAG +
Preference number: 2 (lower is better)
Translates to: HCLQLEGVGALLLSIKAQHVLHH*EVVATQ
Trigger: CTGAGTGGCTACAACTTCTCAGTGATGGAGAACATG...CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CCA 90 bp GCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGCTTGGTCTGAGTCATTaGCCTTCACCTGGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: AWWNVYSISALAPWSESLLGLSH*PSPGWV
Trigger: CACCCAACCAGGTGAAGGCCAATGACTCAGACCAAG...CAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp CTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTaGGGGTGGGAAGTCCGAGGTCTGGGTCAGGGGGAT +
Preference number: 3 (lower is better)
Translates to: LALGRLGRCRCG*GWEVRGLGQGD
Trigger: ATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp CCGGCCAGTAGGGGGCTCACAGGTAGATCTCGCGCTTaGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTG +
Preference number: 3 (lower is better)
Translates to: PASRGLTGRSRA*PSGQMPVWLRV
Trigger: CACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTACTGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp AGATCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTaGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: RSRAWPSGQMPV*LRVGSPRSGSG
Trigger: CCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 72 bp AGGCTGTGCCATAGCGTGGGGGCTTGCCGCGGTCACTaGCCTTCACCACCAGGCGGTGTAGCCCATGGTGGC +
Preference number: 3 (lower is better)
Translates to: RLCHSVGACRGH*PSPPGGVAHGG
Trigger: GCCACCATGGGCTACACCGCCTGGTGGTGAAGGTCAGTGACCGCGGCAAGCCCCCACGCTATGGCACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp GATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTaGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCC +
Preference number: 3 (lower is better)
Translates to: DAGVAAGGKSEV*VRGISSKVAES
Trigger: GGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp CTTGGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTaGGAAGTCCGAGGTCTGGGTCAGGGGGATTTCCTC +
Preference number: 3 (lower is better)
Translates to: LGRLGRCRCGCG*EVRGLGQGDFL
Trigger: GAGGAAATCCCCCTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp AGAGCGATAGTGGCGGCCCAGGTCAGGGCTGCCTGGTaGGTAGTTGAGGGGCAGGTGGATGCGGGGACTGTC +
Preference number: 3 (lower is better)
Translates to: RAIVAAQVRAAW*VVEGQVDAGTV
Trigger: GACAGTCCCCGCATCCACCTGCCCCTCAACTACCCACCAGGCAGCCCTGACCTGGGCCGCCACTATCGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTCCTGGAATGGGCCATTaGGGAGCTGGCCGGCGGCTG +
Preference number: 3 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPPGMGH*GAGRRL
Trigger: CAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGG...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR TCA 72 bp GCTGTCTGCAGTAGCGCACAAGAACCGCCAGGGCGATaGGCAAGGCCACGGCCACCACACCAGCCACCACAC +
Preference number: 3 (lower is better)
Translates to: AVCSSAQEPPGR*ARPRPPHQPPH
Trigger: GTGTGGTGGCTGGTGTGGTGGCCGTGGCCTTGCTCATCGCCCTGGCGGTTCTTGTGCGCTACTGCAGACAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp TCACAGGTAGATCTCGCGCTTGGCCGTCTGGGCAGATaGCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: SQVDLALGRLGR*RCGCGWEVRGL
Trigger: CAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACCTGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp GGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTaGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTG +
Preference number: 3 (lower is better)
Translates to: GQRGHEVSDTPT*GPGQEVHAEGV
Trigger: CACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CAA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCCGCACGGGGGCCGTTTaGGTGTTCCGGTCTTCCGGG +
Preference number: 3 (lower is better)
Translates to: PALVGHEGNNELEVRCPPRTGAV*VFRSSG
Trigger: CCCGGAAGACCGGAACACCAAAACGGCCCCCGTGCG...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 72 bp TTTGAGGGCGCTGCTCTTGGTCCGGCGGCTGGGAGATaGCTGGCCAGGCATCCAGCATGTGTCAGAGTGGCC +
Preference number: 3 (lower is better)
Translates to: FEGAALGPAAGR*LARHPACVRVA
Trigger: GGCCACTCTGACACATGCTGGATGCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR TCA 72 bp CTCCTCGGTCCTGGTAAGGCACGAAGGTGGAGAGTTTaGGGGCGCTGCTCTTGGTCCGGCGGCTGGGAGATG +
Preference number: 3 (lower is better)
Translates to: LLGPGKARRWRV*GRCSWSGGWEM
Trigger: CATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAAACTCTCCACCTTCGTGCCTTACCAGGACCGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CAA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCCGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 3 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR GCA 72 bp CTCACTGGCCTGGCGCAGCTGGAAGGGCACATCACCTaGCACCACACAGGTGACAGCTGCATTCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: LTGLAQLEGHIT*HHTGDSCILSL
Trigger: GAGGGAGAGAATGCAGCTGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp CGGTCACTGACCTTCACCACCAGGCGGTGTAGCCCATaGTGGCGCCGCTCAATCTCCTTCTCCAGGGTGATG +
Preference number: 3 (lower is better)
Translates to: RSLTFTTRRCSP*WRRSISFSRVM
Trigger: CATCACCCTGGAGAAGGAGATTGAGCGGCGCCACCATGGGCTACACCGCCTGGTGGTGAAGGTCAGTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp CAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAA +
Preference number: 3 (lower is better)
Translates to: QPCFRAKIGHAIPALVGHVRCPP*TPPSAQ
Trigger: TTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC...ATGGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR GCA 72 bp CGTGGACGTGGTGTCCCCGGTGCCCACGAATGTGTTTaGAGGTGGCAGGTCCTGTACCACCTGGTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: RGRGVPGAHECV*RWQVLYHLVLL
Trigger: AAGAAGCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp AGTACTGCTCAGAGCCCGTGGACGTGGTGTCCCCGGTaGCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTA +
Preference number: 3 (lower is better)
Translates to: STAQSPWTWCPR*PRMCLQVAGPV
Trigger: TACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp TTGCTGTCACTGCCTGTCTCACTGGCCTGGCGCAGCTaGAAGGGCACATCACCTGCCACCACACAGGTGACA +
Preference number: 3 (lower is better)
Translates to: LLSLPVSLAWRS*KGTSPATTQVT
Trigger: TGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTGACAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp AGCTGTAGTCGGAGTACTGCTCAGAGCCCGTGGACGTaGTGTCCCCGGTGCCCACGAATGTGTTTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: SCSRSTAQSPWT*CPRCPRMCLQV
Trigger: CACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACTCCGACTACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp TGCGGTAGCTGTAGTCGGAGTACTGCTCAGAGCCCGTaGACGTGGTGTCCCCGGTGCCCACGAATGTGTTTG +
Preference number: 3 (lower is better)
Translates to: CGSCSRSTAQSP*TWCPRCPRMCL
Trigger: CAAACACATTCGTGGGCACCGGGGACACCACGTCCACGGGCTCTGAGCAGTACTCCGACTACAGCTACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp AAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCCCAGATGGCCTGGAATGGGCCATTaGGGAGCTGGCCGGCGGCTG +
Preference number: 3 (lower is better)
Translates to: KVLIYRHCMTSREWGPRWPGMGH*GAGRRL
Trigger: CAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGG...CCATCTGGGCCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CAA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGTGCAGAGGAGCCCTCTaGGGCATCAGATGGGGGAAG +
Preference number: 3 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKECRGAL*GIRWGK
Trigger: CTTCCCCCATCTGATGCCCAAGAGGGCTCCTCTGCA...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CAA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGCTTCAGGGCTAAAATaGGGCATGCTATCCCCGCCC +
Preference number: 3 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAEASGLK*GMLSPP
Trigger: GGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGC...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR TCA 72 bp CCCTTAATCTTCACTCAGCCTAATCCGTGTGCCCGGTaGGGCACTAAGGCCCCACCTCCCACTGCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: PLIFTQPNPCAR*GTKAPPPTAGS
Trigger: TGAGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGATTAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
3UTR GCA 72 bp GTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTaGAGAGGAGCCCTCTTGGGCATCAGATGGGGGAAG +
Preference number: 3 (lower is better)
Translates to: VLPGSQGKEPSH*RGALLGIRWGK
Trigger: CTTCCCCCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR GCA 72 bp ACAGCTGCATTCTCTCCCTCATCTCGGTCAGACACCTaGACCAGGGCCACAGCTGTCTCCTCTGCCACATCC +
Preference number: 3 (lower is better)
Translates to: TAAFSPSSRSDT*TRATAVSSATS
Trigger: GGATGTGGCAGAGGAGACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGATGAGGGAGAGAATGCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp GACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTaGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: DSTICPNRGGAP*KSREGAQSLQR
Trigger: CCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR-3UTR CAA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAA +
Preference number: 3 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASVRCPP*TPPSAQ
Trigger: TTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR TCA 72 bp CAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTaGGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: QRCLHLDLSSLG*DGEEALSSRLR
Trigger: CCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 72 bp CTCGTCCAGCACATTGATGGTGACACCAACGTAAGCTaGGCGAGGTGGGACGCCACCATCCACTGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: LVQHIDGDTNVS*ARWDATIHCLQ
Trigger: CTGAAGGCAGTGGATGGTGGCGTCCCACCTCGCTCAGCTTACGTTGGTGTCACCATCAATGTGCTGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 72 bp GCCCATGGTGGCGCCGCTCAATCTCCTTCTCCAGGGTaGTGGCACCTGAATGTGACCCAATCTGGAAGAGTC +
Preference number: 3 (lower is better)
Translates to: AHGGAAQSPSPG*WHLNVTQSGRV
Trigger: GACTCTTCCAGATTGGGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGATTGAGCGGCGCCACCATGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp GTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTaGCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGG +
Preference number: 3 (lower is better)
Translates to: VRSTLPTLDSTI*PNRGGAPWKSR
Trigger: CCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR GCA 72 bp CAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTaGCTGTCATGGCGACATCAGGCAAAGGGCGAAGGT +
Preference number: 3 (lower is better)
Translates to: QSGQTHCTPGYM*LSWRHQAKGEG
Trigger: ACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR CCA 72 bp GAGATGGAAATGAGGGGAGAGGACCTGGACCCTGCATaGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGAT +
Preference number: 3 (lower is better)
Translates to: EMEMRGEDLDPA*EKGQRGHEVSD
Trigger: ATCACTGACCTCATGACCACGCTGGCCCTTCTCCCATGCAGGGTCCAGGTCCTCTCCCCTCATTTCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 72 bp CAAACTCACTGCACTCCCGGGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGCGAAGGTCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: QTHCTPGYMCLS*RHQAKGEGLAL
Trigger: GAGTGCCAGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
3UTR-3UTR CAA 90 bp TTTTGTTTCCCTTGGAGGCCTTGCCACTGGGCTTGGGGGCATACAGGTCCTTGGCCTTGGTCTGAGTCATaGGCCTTCACCTGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: FCFPWRPCHWAWGHTGPWPWSES*AFTWLG
Trigger: ACCCAACCAGGTGAAGGCCAATGACTCAGACCAAGG...CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp AACACGGGCAGGCACAGTAAACCTGCTCCATCACTCCCACACCTCGGTCCAGATACACCAAAGAGAATGTaGCCACGCTGCTTGGAGCGC +
Preference number: 3 (lower is better)
Translates to: NTGRHSKPAPSLPHLGPDTPKRM*PRCLER
Trigger: GCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGT...ATCTGGACCGAGGTGTGGGAGTGATGGAGCAGGTTTACTGTGCCTGCCCGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp CCTGTGCCATTCTGGATAACAAAGTCACCGTTGTCCTaGTCCACTGAGAGCTGCACCTGGGCATTCTCCCCC +
Preference number: 3 (lower is better)
Translates to: PVPFWITKSPLS*STESCTWAFSP
Trigger: GGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAATGGCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTaGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: PTFGNKSPSGSH*WSRVSSGSSQG
Trigger: TCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 72 bp CTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCACCTaGATCTCTCCAGTCTCGGGTGAGATGGTGAAGAGG +
Preference number: 3 (lower is better)
Translates to: LSRCSRSRDVFT*ISPVSGEMVKR
Trigger: CCTCTTCACCATCTCACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp CCTTGGTCTCCTTCTTACCAGCCTGGTAACCACTTTTaGCCTCCCGCTGTCTGCAGTAGCGCACAAGAACCG +
Preference number: 3 (lower is better)
Translates to: PWSPSYQPGNHF*PPAVCSSAQEP
Trigger: CGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCAAAAGTGGTTACCAGGCTGGTAAGAAGGAGACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp AGGCCTTGCCACTGGGCTTGGGGGCATACAGGTCCTTaGTCTCCTTCTTACCAGCCTGGTAACCACTTTTGG +
Preference number: 3 (lower is better)
Translates to: RPCHWAWGHTGP*SPSYQPGNHFW
Trigger: CCAAAAGTGGTTACCAGGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp TGGGGACGTCATTCCAAGGTCCTTATATACAGACACTaGATGACCAGCAGGGAATGGGGGCCCAGATGGGAC +
Preference number: 3 (lower is better)
Translates to: WGRHSKVLIYRH*MTSREWGPRWD
Trigger: GTCCCATCTGGGCCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 72 bp TGCTTTTGTTTCCCTTGGAGGCCTTGCCACTGGGCTTaGGGGCATACAGGTCCTTGGTCTCCTTCTTACCAG +
Preference number: 3 (lower is better)
Translates to: CFCFPWRPCHWA*GHTGPWSPSYQ
Trigger: CTGGTAAGAAGGAGACCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp GGCCTCATCCTCGTCCTCCACTGGCTTCACGGGCTTTaGGGACTTGCTCTTCTTGCCTTTGCTTTTGTTTCC +
Preference number: 3 (lower is better)
Translates to: GLILVLHWLHGL*GLALLAFAFVS
Trigger: GGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGATGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 72 bp ATTCTGGATAACAAAGTCACCGTTGTCCTGCTCCACTaGGAGCTGCACCTGGGCATTCTCCCCCTTGTCTCC +
Preference number: 3 (lower is better)
Translates to: ILDNKVTVVLLH*ELHLGILPLVS
Trigger: GGAGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp CGCCACCATCCACTGCCTTCAGCTGGAAGGTGTAGGTaGTTTGTTGCTCTCGATCAAAGCTCAGGCTGGATA +
Preference number: 3 (lower is better)
Translates to: RHHPLPSAGRCR*FVALDQSSGWI
Trigger: TATCCAGCCTGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGGATGGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp ACACCAGCCACCACACCAAAGAGAATGTTGCCACGCTaGTTGGAGCGCTCATATTCTGGATCCCCAGCAATG +
Preference number: 3 (lower is better)
Translates to: TPATTPKRMLPR*LERSYSGSPAM
Trigger: CATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGTGGCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp ACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTaGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAG +
Preference number: 3 (lower is better)
Translates to: TFGNKSPSGSHW*SRVSSGSSQGK
Trigger: CTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CCA 72 bp GAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTaGATCCCCAGCAATGTCAATATCCAGCGGCGTGTC +
Preference number: 3 (lower is better)
Translates to: ENVATLLGALIF*IPSNVNIQRRV
Trigger: GACACGCCGCTGGATATTGACATTGCTGGGGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 72 bp GAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTGGTTGGGTGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: ECVFDFCIGTLV*VIGLHLVGWAP
Trigger: GGGAGCCCACCCAACCAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR GCA 72 bp ATAACAAAGTCACCGTTGTCCTGCTCCACTGAGAGCTaGACCTGGGCATTCTCCCCCTTGTCTCCATCAATG +
Preference number: 3 (lower is better)
Translates to: ITKSPLSCSTES*TWAFSPLSPSM
Trigger: CATTGATGGAGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CCA 72 bp AGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCTGCATTGGCACCTTGG +
Preference number: 3 (lower is better)
Translates to: SRRRRLTTSGAW*NVYSISALAPW
Trigger: CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR CCA 72 bp TCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATTTCTGCATTGGCACCT +
Preference number: 3 (lower is better)
Translates to: SSRRRRLTTSGA*WNVYSISALAP
Trigger: AGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR-3UTR CAA 90 bp AACACGGGCAGGCACAGTAAACCTGCTCCATCACTCCCACACCTCGGTCCAGATTATTCGATTTCTGCATaGGCACCTTGGTCTGAGTCA +
Preference number: 3 (lower is better)
Translates to: NTGRHSKPAPSLPHLGPDYSISA*APWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATA...ATCTGGACCGAGGTGTGGGAGTGATGGAGCAGGTTTACTGTGCCTGCCCGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR-3UTR CAA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTTTGCAGTCCAGCACATaGACAAGGACAGTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: LEESIRVATCNAVDQLSILQSST*TRTVAV
Trigger: CACAGCCACTGTCCTTGTCAATGTGCTGGACTGCAA...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR TCA 72 bp GCCCACTGGACTCAGTGCTGGCATGTTCTCCATCACTaGGAAGTTGTAGCCACTCAGCATAAATTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: AHWTQCWHVLHH*EVVATQHKFGV
Trigger: GACCCCAAATTTATGCTGAGTGGCTACAACTTCTCAGTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCCCGAGTGGCGTGGCCTaGGGATGGAGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEAPSGVA*GWSQQE
Trigger: CTCCTGCTGGCTCCATCCCCAGGCCACGCCACTCGG...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGGCAGCAGTAGCCGTTaGCCCCCAGGGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAGSSSR*PPGPGL
Trigger: CAGCCCAGGCCCTGGGGGGCAACGGCTACTGCTGCC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGTGCTGGGATGGGTCCTaGAGCTCCTGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RLGRCRCGCGWEVRGLGQCWDGS*SSWAWL
Trigger: CAGCCAGGCCCAGGAGCTGCAGGACCCATCCCAGCA...CTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCGGCTGTGCCATAGCGTaGGGGCTTGCCGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEAGCAIA*GLAAVT
Trigger: AGTGACCGCGGCAAGCCCCCACGCTATGGCACAGCC...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCTCGCGCTTGGCCGTCTaGGCAGATGCCGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEASRLAV*ADAGVA
Trigger: AGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGA...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGGCCATTTGGGAGCTaGCCGGCGGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPGPFGS*PAAGGG
Trigger: CCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCC...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTGAGGCCCTGGAATGGGCCATTTGGGAGCTGGCCGGCGGCTGGGGGAGGGGGAGTGAGGCCCTGGAATaGGCCATTTGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SEALEWAIWELAGGWGRGSEALE*AIWELA
Trigger: GGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT...CCCCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTCCGCACGGCTGGGGCTaGAGCTGCAGTTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHAPHGWG*SCSSGS
Trigger: GGAGCCCGAACTGCAGCTCCAGCCCCAGCCGTGCGG...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGGGCCGGCCGGCCAGTAGGGGGCTCACAGGTAGATCTCGCGCTTGGCCGTCTGTCAGGTGCTCCATCCTaGGAGGCCCCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: GAGRPVGGSQVDLALGRLSGAPS*EAPESG
Trigger: TCCTGATTCTGGGGCCTCCCAGGATGGAGCACCTGA...CAGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTACTGGCCGGCCGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGGCGTGTCCAGGCTGTaGCCCAGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQGVSRL*PRRVSS
Trigger: GCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCC...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTCAGAGCCCGTGGACGTaGTGTCCCCGGTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAQSPWT*CPRCPR
Trigger: TCGTGGGCACCGGGGACACCACGTCCACGGGCTCTG...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCGGGCCATTTGGGAGCTaGCCGGCGGCTGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGGPFGS*PAAGGG
Trigger: CCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCC...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp GAGAGTTTGAGGGCGCTGCTCTTGGTCCGGCGGCTGGGAGATGACTGGCCAGGCTGGTGTCAAGCACGGTaGCACGCAGCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: ESLRALLLVRRLGDDWPGWCQAR*HAAGHC
Trigger: GCAGTGCCCTGCTGCGTGTCACCGTGCTTGACACCA...GCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAAACTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCGCTTGCCGCGGTCACTaGCCTTCACCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGACRGH*PSPPGG
Trigger: ACCGCCTGGTGGTGAAGGTCAGTGACCGCGGCAAGC...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGCTTGCCGCGGTCACTaGCCTTCACCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAACRGH*PSPPGG
Trigger: ACCGCCTGGTGGTGAAGGTCAGTGACCGCGGCAAGC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR TCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGGGGCTGGGGTGTGCTaGGCTGAAAGGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAGAGVC*AERAGL
Trigger: TAGGCCAGCCCTTTCAGCTCAGCACACCCCAGCCCC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGGCTGTGCCTCAGGTaGTCCATCCTGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPGLCLR*SILGGP
Trigger: GGGGCCTCCCAGGATGGAGCACCTGAGGCACAGCCC...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TCTCGCGCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGGCAGTGCTAGCAGCATaGAGGGCAGCAGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SRAWPSGQMPVWLRVGSPAVLAA*RAAVAV
Trigger: AACGGCTACTGCTGCCCTCCATGCTGCTAGCACTGC...CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp ACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCCAGAGCCCGTGGACGTaGTGTCCCCGGTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: TTTWARALLGLVPRSLASQSPWT*CPRCPR
Trigger: TCGTGGGCACCGGGGACACCACGTCCACGGGCTCTG...GCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGACTGCTCAGAGCCCGTaGACGTGGTGTCCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGTAQSP*TWCPRC
Trigger: GCACCGGGGACACCACGTCCACGGGCTCTGAGCAGT...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GAGAGTTTGAGGGCGCTGCTCTTGGTCCGGCGGCTGGGAGATGACTGGCCAGGCCGAGGGGGTGCTCCCTaGAAGTCAAGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ESLRALLLVRRLGDDWPGRGGAP*KSREGA
Trigger: GGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCG...GCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAAACTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCCGGGATGGGGAAGAGTaGGCCGATGTTGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEARDGEE*ADVGVL
Trigger: GAGAACACCAACATCGGCTCACTCTTCCCCATCCCG...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAGAACCGCCAGGGCGATaGGCAAGGCCACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPEPPGR*ARPRPP
Trigger: TGGTGGCCGTGGCCTTGCTCATCGCCCTGGCGGTTC...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGGCTGGGGCTGGAGCTaGAGTTCGGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHGWGWS*SSGSGS
Trigger: GGAGCCGGAGCCCGAACTGCAGCTCCAGCCCCAGCC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGGGGCTGTGCCTCAGGTaGTCCATCCTGGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRGLCLR*SILGGP
Trigger: GGGGCCTCCCAGGATGGAGCACCTGAGGCACAGCCC...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGGGCAGCAGTAGCCGTTaGCCCCCAGGGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEGSSSR*PPGPGL
Trigger: CAGCCCAGGCCCTGGGGGGCAACGGCTACTGCTGCC...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGAGAGGACCTGGACCCTaGATGGGAGAAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGRGPGP*MGEGPA
Trigger: CGCTGGCCCTTCTCCCATGCAGGGTCCAGGTCCTCT...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGAATCATGCCGCACGGCTGGGGCTaGAGCTGCAGTTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLGQGDFLQGGRVLAGIMPHGWG*SCSSGS
Trigger: GGAGCCCGAACTGCAGCTCCAGCCCCAGCCGTGCGG...CATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGGCGGCTCCGCACGGCTaGGGCTGGAGCTGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERAAPHG*GWSCSS
Trigger: CGAACTGCAGCTCCAGCCCCAGCCGTGCGGAGCCGC...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGCGGCTCCGCACGGCTaGGGCTGGAGCTGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVAAPHG*GWSCSS
Trigger: CGAACTGCAGCTCCAGCCCCAGCCGTGCGGAGCCGC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGAGCCCAAATAGCTCCTaGGCCTCAGGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQSPNSS*ASGPAC
Trigger: GCAGGCTGGGCCTGAGGCCCAGGAGCTATTTGGGCT...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHAGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASTVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTGGCCTGGCGCAGCTaGAAGGGCACATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGALAWRS*KGTSPA
Trigger: GGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAG...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGCCTGTCTCACTGGCCTaGCGCAGCTGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASPVSLA*RSWKGT
Trigger: TGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGG...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAAGGCGGTGTAGCCCATaGTGGCGCCGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPRRCSP*WRRSIS
Trigger: GGAGATTGAGCGGCGCCACCATGGGCTACACCGCCT...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTAGGCGGTGTAGCCCATaGTGGCGCCGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLARRCSP*WRRSIS
Trigger: GGAGATTGAGCGGCGCCACCATGGGCTACACCGCCT...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGGCTGTGCCATAGCGTaGGGGCTTGCCGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: TVTTTWARALLGLVPRSLGCAIA*GLAAVT
Trigger: AGTGACCGCGGCAAGCCCCCACGCTATGGCACAGCC...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCATCTTGGTCCGGCGGCTaGGAGATGACTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPSWSGG*EMTGQA
Trigger: TGCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGA...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTCGGTGTGGCTGCGGGTaGGAAGTCCGAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPRCGCG*EVRGLG
Trigger: ACCCAGACCTCGGACTTCCCACCCGCAGCCACACCG...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCGGGCAGATGCCGGTGTaGCTGCGGGTGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLGQMPV*LRVGSP
Trigger: CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCC...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGACTGCTGGCTCAGGCTaGCCCCCAACACGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRTAGSG*PPTRAG
Trigger: GCCTGCCCGTGTTGGGGGCCAGCCTGAGCCAGCAGT...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGCTGCGAGGCTCCCAATaGGGGTGTTGGGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQLRGSQ*GCWVAV
Trigger: AACAGCCACCCAACACCCTCATTGGGAGCCTCGCAG...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCCGGCTGCCACCTGGCTaGCCGTCTCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPRLPPG*PSHQDV
Trigger: CACGTCTTGGTGAGACGGTCAGCCAGGTGGCAGCCG...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CTCATCTCGGTCAGACACCTGCACCAGGGCCACAGCTGTCTCCTCTGCCACATCCGGCTGCCACCTGGCTaGCCGTCTCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: LISVRHLHQGHSCLLCHIRLPPG*PSHQDV
Trigger: CACGTCTTGGTGAGACGGTCAGCCAGGTGGCAGCCG...GATGTGGCAGAGGAGACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCTCTCCTTCTCCAGGGTaGTGGCACCTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEASPSPG*WHLNVT
Trigger: GGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGA...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAATGCCTGGTGGGTAGTTaGGGGGCAGGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPRECLVGS*GAGGCG
Trigger: CCCGCATCCACCTGCCCCTCAACTACCCACCAGGCA...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCTGCCTGGTGGGTAGTTaGGGGGCAGGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCCLVGS*GAGGCG
Trigger: CCCGCATCCACCTGCCCCTCAACTACCCACCAGGCA...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp GTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTAAGGTGACGCGGCGGTaGGGTAACTGCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VRCPPLTPPSAQIEGVLPKVTRR*GNCLLG
Trigger: CCCCAGCAAGCAGTTACCTCACCGCCGCGTCACCTT...AGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCTGGTGGCCGAGAAGGTaGCGCGGCGGTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAWWPRR*RGGEVT
Trigger: AGTTACCTCACCGCCGCGTCACCTTCTCGGCCACCA...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGGGCTGGGGCTGGAGCTaGAGTTCGGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKGWGWS*SSGSGS
Trigger: GGAGCCGGAGCCCGAACTGCAGCTCCAGCCCCAGCC...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGGCTGGGGCTGGAGCTaGAGTTCGGGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKGWGWS*SSGSGS
Trigger: GGAGCCGGAGCCCGAACTGCAGCTCCAGCCCCAGCC...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCCCAGGGCCTGGGCTGTaGCTCAGGTGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPPGPGL*LRCSIL
Trigger: CAGGATGGAGCACCTGAGGCACAGCCCAGGCCCTGG...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCCAGGGCCTGGGCTGTaGCTCAGGTGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSPGPGL*LRCSIL
Trigger: CAGGATGGAGCACCTGAGGCACAGCCCAGGCCCTGG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAGGCAGCAGTAGCCGTTaGCCCCCAGGGCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSGSSSR*PPGPGL
Trigger: CAGCCCAGGCCCTGGGGGGCAACGGCTACTGCTGCC...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTAGCAGCCGGGGGCTaGCATTCTGCACGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLLAAGG*HSARGL
Trigger: CAGACCTCGTGCAGAATGGCAGCCCCCGGCTGCTAG...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCGTCAAAGTCCTCGGCTaGCACCTGGCTGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGVKVLG*HLADRL
Trigger: GAGACGGTCAGCCAGGTGGCAGCCGAGGACTTTGAC...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGGTCAAAGTCCTCGGCTaGCACCTGGCTGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: SFTVTTTWARALLGLVPRVKVLG*HLADRL
Trigger: GAGACGGTCAGCCAGGTGGCAGCCGAGGACTTTGAC...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGAGGGTGACTGGGGCTaGAGCTGGATGGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPEGDWG*SWMEGS
Trigger: ACTGCCTTCCATCCAGCTGCAGCCCCAGTCACCCTC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAATGCTGGGATGGGTCCTaGAGCTCCTGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAECWDGS*SSWAWL
Trigger: CAGCCAGGCCCAGGAGCTGCAGGACCCATCCCAGCA...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTAGATGCCGGTGTGGCTaGGGGTGGGAAGTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPRCRCG*GWEVRG
Trigger: ACCTCGGACTTCCCACCCGCAGCCACACCGGCATCT...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCGAGTGGCGTGGCCTaGGGATGGAGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEPSGVA*GWSQQE
Trigger: CTCCTGCTGGCTCCATCCCCAGGCCACGCCACTCGG...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCACTACCCGAGTGGCGTaGCCTGGGGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGTTRVA*PGDGAS
Trigger: GCTGGCTCCATCCCCAGGCCACGCCACTCGGGTAGT...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTGAGGCCCTGGAATGGGCCATTTGGGAGCTGGCCGGCGGCTGGGGGAGGGGGCATCACAATGAGCTGTaGTTGCTTCTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SEALEWAIWELAGGWGRGHHNEL*LLLLLV
Trigger: GACCAGGAGGAGAAGCAACCACAGCTCATTGTGATG...CCCCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTTCCTCGGCTGCCACCTaGCTGACCGTCTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLASSAAT*LTVSPR
Trigger: TCTTGGTGAGACGGTCAGCCAGGTGGCAGCCGAGGA...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp CGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGTGCTGCCATCAGGGGTaGTGCGCTCATAGTGATCCT +
Preference number: 4 (lower is better)
Translates to: RLGRCRCGCGWEVRGLGQCCHQG*CAHSDP
Trigger: AGGATCACTATGAGCGCACCACCCCTGATGGCAGCA...CTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCTCTTGGTCCGGCGGCTaGGAGATGACTGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PPSAQIEGVLPGSQGKEPSWSGG*EMTGQA
Trigger: TGCCTGGCCAGTCATCTCCCAGCCGCCGGACCAAGA...GGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCGCACGGGGGCCGTTTTaGTGTTCCGGTCTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPARGPF*CSGLPG
Trigger: CCCCGGAAGACCGGAACACCAAAACGGCCCCCGTGC...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCCGGTGTGGCTGCGGGTaGGAAGTCCGAGGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: FSPASGLKLGMLSPPWSARCGCG*EVRGLG
Trigger: ACCCAGACCTCGGACTTCCCACCCGCAGCCACACCG...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCGGTAGATCTCGCGCTTaGCCGTCTGGGCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAGRSRA*PSGQMP
Trigger: CGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACC...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCGACCTGGACCCTGCATaGGAGAAGGGCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGADLDPA*EKGQRG
Trigger: ACCACGCTGGCCCTTCTCCCATGCAGGGTCCAGGTC...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTGGGTCAGTCAGGGAGCCACTGGTaGTCAAGAGTTTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RLGRCRCGCGWEVRGLGQSGSHW*SRVSSG
Trigger: CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGA...CTGACCCAGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCATGTGGCAGGCAGGTaGGCCAGTCCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAHVAGR*ASPGAA
Trigger: TGCTGCTCCTGGACTGGCCCACCTGCCTGCCACATG...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCCACCCGTTGTTTCCCTaGCCTGCACCCCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: PPSAQIEGVLPGSQGKEPHPLFP*PAPPSH
Trigger: GTGGGATGGGGGTGCAGGCCAGGGAAACAACGGGTG...GGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAAAGGGCGAAGGTCTaGCACTCTGCCTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGQRAKV*HSASGP
Trigger: AGGCCCTGAGGCAGAGTGCCAGACCTTCGCCCTTTG...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp CAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATTGGTGTCAAGCACGGTaGCACGCAGCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: QPCFRAKIGHAIPALVGHWCQAR*HAAGHC
Trigger: GCAGTGCCCTGCTGCGTGTCACCGTGCTTGACACCA...ATGGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCTGGTGTCAAGCACGGTaGCACGCAGCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTWCQAR*HAAGHC
Trigger: GCAGTGCCCTGCTGCGTGTCACCGTGCTTGACACCA...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR TCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCTGGCCTTCACCTGGATaGCCGAGTGGCCTATGGGGC +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGWPSPG*PSGLWG
Trigger: GCCCCATAGGCCACTCGGTCATCCAGGTGAAGGCCA...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp GTCTCGGGTGAGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGAGCGGTCCACCGGGCCCTaGACAGTGATAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VSGEMVKRPLAAGSGSRERSTGP*TVISPV
Trigger: CACTGGACTTATCACTGTTCAGGGCCCGGTGGACCG...CTCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGCTGCCACCACACAGGTaGCAGCTGCATTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQLPPHR*QLHSLP
Trigger: AGGGAGAGAATGCAGCTGTCACCTGTGTGGTGGCAG...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGTTGTCCTGCTCCACTaGGAGCTGCACCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAVVLLH*ELHLGI
Trigger: AATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAAC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR TCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGACACCAACGTAAGCTaGGCGAGGTGGGACGCCACC +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPDTNVS*ARWDAT
Trigger: GGTGGCGTCCCACCTCGCTCAGCTTACGTTGGTGTC...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAGACACCAACGTAAGCTaGGCGAGGTGGGACGCCACC +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPDTNVS*ARWDAT
Trigger: GGTGGCGTCCCACCTCGCTCAGCTTACGTTGGTGTC...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR TCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGCGGCTGCCACCTGGCTaGCCGTCTCACCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSRLPPG*PSHQDV
Trigger: CACGTCTTGGTGAGACGGTCAGCCAGGTGGCAGCCG...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGCCGGCGGCTGGGAGATaGCTGGCCAGGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQPAAGR*LARHPA
Trigger: TGCTGGATGCCTGGCCAGTCATCTCCCAGCCGCCGG...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GTCTCGGGTGAGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGAGTGGCCTCCCGCTGTCTaGAGTAGCGCACAAGAACCG +
Preference number: 4 (lower is better)
Translates to: VSGEMVKRPLAAGSGSREWPPAV*SSAQEP
Trigger: CGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCA...CTCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCAGATGCCGGTGTGGCTaGGGGTGGGAAGTCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPRCRCG*GWEVRG
Trigger: ACCTCGGACTTCCCACCCGCAGCCACACCGGCATCT...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCAGAGGACCTGGACCCTaGATGGGAGAAGGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPRGPGP*MGEGPA
Trigger: CGCTGGCCCTTCTCCCATGCAGGGTCCAGGTCCTCT...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGAAGGAGCCCAGTCATTaGAGAGGAGCCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQKEPSH*RGALLG
Trigger: GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTT...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGCCCAAATCGAGGGGGTaGTCCCTGGAAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQPKSRG*SLEVKG
Trigger: TCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGG...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGGAAGGTCTGGCACTCTaGCTCAGGGCCTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEEGLAL*LRACSG
Trigger: GCCGGAGCAGGCCCTGAGGCAGAGTGCCAGACCTTC...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCGCACGGCTGGGGCTaGAGCTGCAGTTCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAPHGWG*SCSSGS
Trigger: GGAGCCCGAACTGCAGCTCCAGCCCCAGCCGTGCGG...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCCGAGTGGCGTGGCCTaGGGATGGAGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKPSGVA*GWSQQE
Trigger: CTCCTGCTGGCTCCATCCCCAGGCCACGCCACTCGG...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGCCAGGGAGCTGGTTCTaGCATTCACGGAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SPRSGSGGFPPRWPSPCRPGSWF*HSRSPS
Trigger: TGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGG...CCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGGATCACCAGGGAGCTaGTTCTGGCATTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPGSPGS*FWHSRS
Trigger: GCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPGCFSS*SSATCS
Trigger: GCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACC...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AATCATGGCTACTGTGGGAGAAGGCACTGTAGGAGGGCAGGAGGCGCACGGGGGGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NHGYCGRRHCRRAGGARGGCFSS*SSATCS
Trigger: GCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACC...CCCCCGTGCGCCTCCTGCCCTCCTACAGTGCCTTCTCCCACAGTAGCCATGATT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPRETVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRTVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCGCTGTTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTGCTGGCCTGGCGCAGCTaGAAGGGCACATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PAVPDPEMSSPGSLQSRVLAWRS*KGTSPA
Trigger: GGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAG...CACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATCCTGTCTCACTGGCCTaGCGCAGCTGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: QPCFRAKIGHAIPALVGHPVSLA*RSWKGT
Trigger: TGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGG...ATGGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCCTGTCTCACTGGCCTaGCGCAGCTGGAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSPVSLA*RSWKGT
Trigger: TGTGCCCTTCCAGCTGCGCCAGGCCAGTGAGACAGG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCAGTCACCATGCCCACTaGACTCAGTGCTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEASHHAH*TQCWHV
Trigger: AACATGCCAGCACTGAGTCCAGTGGGCATGGTGACT...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCTGGAGGCCTTGCCACTaGGCTTGGGGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: TTTWARALLGLVPRSLASWRPCH*AWGHTG
Trigger: ACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCA...GCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCACAGGTCAGGGCTGCCTaGTGGGTAGTTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPQVRAA*WVVEGQ
Trigger: CTGCCCCTCAACTACCCACCAGGCAGCCCTGACCTG...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCCTGGATGGAAGGCAGTaGGGAGTTAGAGCGATAGTG +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEALDGRQ*GVRAIV
Trigger: CACTATCGCTCTAACTCCCCACTGCCTTCCATCCAG...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCCACCTGGTGCTTCTTaGAGGCTGAGGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLPPGAS*RLRVTG
Trigger: CCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGG...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCGGGAAGTCCGAGGTCTaGGTCAGGGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAGKSEV*VRGISS
Trigger: GGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCC...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 72 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCAAGCACTGAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TVTTTWARALLG*VPRSLASTEKR
Trigger: GCGCTTCTCAGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
3UTR CAA 72 bp CCGTGGACGTGGTGTCCCCGGTGCCCACGAATGTGTTaGCAGGTGGCAGGTCCTGTACCACCTGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PWTWCPRCPRMC*QVAGPVPPGAS
Trigger: AGAAGCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGACACCACGTCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAACGGTCCACCGGGCCCTaGACAGTGATAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPRERSTGP*TVISPV
Trigger: CACTGGACTTATCACTGTTCAGGGCCCGGTGGACCG...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp ACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCACTGGGGTCAGCAGCTTGTaGGAGGTGTTAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TTWARALLGLVPRSLASTGVSSL*EVLEGA
Trigger: TGCCCCTTCTAACACCTCTCACAAGCTGCTGACCCC...AGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGAACCGCCAGGGCGATaGGCAAGGCCACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPREEPPGR*ARPRPP
Trigger: TGGTGGCCGTGGCCTTGCTCATCGCCCTGGCGGTTC...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCTGGTGGCCGAGAAGGTaGCGCGGCGGTGAGGTAACT +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVWWPRR*RGGEVT
Trigger: AGTTACCTCACCGCCGCGTCACCTTCTCGGCCACCA...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCTACGCTGCCCACCCTTaGCTCCACCATCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGAYAAHP*LHHLPK
Trigger: TTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTA...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTAATCCGTGTGCCCGGTaGGGCACTAAGGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGNPCAR*GTKAPP
Trigger: AGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATT...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGCCAGGGCCTGGGCTGTaGCTCAGGTGCTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQPGPGL*LRCSIL
Trigger: CAGGATGGAGCACCTGAGGCACAGCCCAGGCCCTGG...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGAGTCACTAGCCCTATaGCCCGGATCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAESLAL*PGSQWW
Trigger: CCACCATTGAGATCCGGGGCATAGGGCTAGTGACTC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGCACATCACCTaGCACCACACAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHAEGHIT*HHTGDS
Trigger: GCTGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTC...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGCCCACTGGACTCAGTaGTGGCATGTTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPAHWTQ*WHVLHH
Trigger: GTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCATGCTCCACTGAGAGCTaGACCTGGGCATTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPCSTES*TWAFSP
Trigger: GGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCA...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGTGCTCCACTGAGAGCTaGACCTGGGCATTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRCSTES*TWAFSP
Trigger: GGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCA...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCGACGCCACCATCCACTaGCTTCAGCTGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGDATIH*LQLEGV
Trigger: TACACCTTCCAGCTGAAGGCAGTGGATGGTGGCGTC...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAATTCCCTTGGAGGCCTTaGCACTGGGCTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAEFPWRP*HWAWGH
Trigger: ATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAA...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCGGGCCCAACTTGAGGGACTTCTaGAGCCCGGCCTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LASTEKRRVLRSSRSTGPNLRDF*SPASSS
Trigger: CGAGGATGAGGCCGGGCTGCAGAAGTCCCTCAAGTT...GGGCCCGGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GTTAGAGCGATAGTGGCGGCCCAGGTCAGGGCTGCCTGGTGGGTAGTTGAGGGGTCCTGTACCACCTGGTaGTTCTTGGAGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VRAIVAAQVRAAWWVVEGSCTTW*FLEAEG
Trigger: ACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGA...CCCCTCAACTACCCACCAGGCAGCCCTGACCTGGGCCGCCACTATCGCTCTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTACGTGGTGTCCCCGGTaGCCACGAATGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHATWCPR*PRMCLQ
Trigger: CTGCAAACACATTCGTGGGCACCGGGGACACCACGT...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp GTCTCGGGTGAGATGGTGAAGAGGCCCTTAGCAGCCGGCTCAGGCTCCAGAGAGACGTGGTGTCCCCGGTaGCCACGAATGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VSGEMVKRPLAAGSGSRETWCPR*PRMCLQ
Trigger: CTGCAAACACATTCGTGGGCACCGGGGACACCACGT...CTCTCTGGAGCCTGAGCCGGCTGCTAAGGGCCTCTTCACCATCTCACCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp AATCATGGCTACTGTGGGAGAAGGCACTGTAGGAGGGCAGGAGGCGCACGGGGGGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHGYCGRRHCRRAGGARGAPSLL*CHQGWC
Trigger: GCACCACCCCTGATGGCAGCATAGGAGAGATGGAGC...CCCCCGTGCGCCTCCTGCCCTCCTACAGTGCCTTCTCCCACAGTAGCCATGATT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGACTCCCGGGTACATGTaGCTGTCATGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQTPGYM*LSWRHQ
Trigger: CTGATGTCGCCATGACAGGCACATGTACCCGGGAGT...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCGTTGTTTCCCTGGCCTaGACCCCCATCCCACCATGG +
Preference number: 4 (lower is better)
Translates to: FSPASGLKLGMLSPPWSAVVSLA*TPIPPW
Trigger: CCATGGTGGGATGGGGGTGCAGGCCAGGGAAACAAC...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATACTACCCGAGTGGCGTaGCCTGGGGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYTTRVA*PGDGAS
Trigger: GCTGGCTCCATCCCCAGGCCACGCCACTCGGGTAGT...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCAGGGAGCTGGTTCTaGCATTCACGGAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLPGSWF*HSRSPS
Trigger: TGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGG...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGAATCATGAGCCCAAATAGCTCCTaGGCCTCAGGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGQGDFLQGGRVLAGIMSPNSS*ASGPAC
Trigger: GCAGGCTGGGCCTGAGGCCCAGGAGCTATTTGGGCT...CATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPGCFSS*SSATCS
Trigger: GCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACC...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCAGGGCCGCTCAAACTTaGGGGCGTTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGRAAQT*GRCHWC
Trigger: ACACCAATGACAACGCCCCCAAGTTTGAGCGGCCCT...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTAGGGCCGCTCAAACTTaGGGGCGTTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: PSRSQPPGHGHSWGWCLGRAAQT*GRCHWC
Trigger: ACACCAATGACAACGCCCCCAAGTTTGAGCGGCCCT...ACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCTGGCCTGGCGCAGCTaGAAGGGCACATCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYLAWRS*KGTSPA
Trigger: GGCAGGTGATGTGCCCTTCCAGCTGCGCCAGGCCAG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGCACTGCCTGTCTCACTaGCCTGGCGCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSHCLSH*PGAAGR
Trigger: CCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTG...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGAGGCGGTGTAGCCCATaGTGGCGCCGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRRRCSP*WRRSIS
Trigger: GGAGATTGAGCGGCGCCACCATGGGCTACACCGCCT...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATGGCTGTGCCATAGCGTaGGGGCTTGCCGCGGTCACT +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYGCAIA*GLAAVT
Trigger: AGTGACCGCGGCAAGCCCCCACGCTATGGCACAGCC...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAGGCGTGTCCAGGCTGTaGCCCAGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQGVSRL*PRRVSS
Trigger: GCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCC...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCCCTTGCCACTGGGCTTaGGGGCATACAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPPCHWA*GHTGPW
Trigger: CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGG...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAATCCTCGTCCTCCACTaGCTTCACGGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVTTTWARALLGLVPRSLILVLH*LHGLWG
Trigger: TCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGAT...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCCACCTGGTGCTTCTTaGAGGCTGAGGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCPPGAS*RLRVTG
Trigger: CCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGG...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAGTAACTGTGCTGGGATaGGTCCTGCAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPREVTVLG*VLQLLG
Trigger: GCCCAGGAGCTGCAGGACCCATCCCAGCACAGTTAC...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGCACGGGGGCCGTTTTaGTGTTCCGGTCTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASARGPF*CSGLPG
Trigger: CCCCGGAAGACCGGAACACCAAAACGGCCCCCGTGC...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTCAGGGAGCCACTGGTaGTCAAGAGTTTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGSGSHW*SRVSSG
Trigger: CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGA...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGCATGTGGCAGGCAGGTaGGCCAGTCCAGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERHVAGR*ASPGAA
Trigger: TGCTGCTCCTGGACTGGCCCACCTGCCTGCCACATG...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTGAGGCCCTGGAATGGGCCATTTGGGAGCTGGCCGGCGGCTGGGGGAGGGGGGGGGTATTTACAACATaGAACAATAGAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SEALEWAIWELAGGWGRGGVFTT*NNRGLG
Trigger: ACCCAGGCCTCTATTGTTCCATGTTGTAAATACCCC...CCCCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT
61% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGACACAGAAGGCACAATaGGAAGGTGCCCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLTQKAQ*EGALPW
Trigger: CCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGT...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCAGGGTCAAGGGCATGTaGGACCCAGCCCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVRVKGM*DPAPEA
Trigger: GGCTTCTGGGGCTGGGTCCCACATGCCCTTGACCCT...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCCAGTCCACCAGGCTCTaGATGACCGAGTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: TTTWARALLGLVPRSLASQSTRL*MTEWPM
Trigger: CATAGGCCACTCGGTCATCCAGAGCCTGGTGGACTG...GCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR TCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTCAGAGTGATGACTGGTaGGGCGAAGTTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAQSDDW*GEVGCV
Trigger: AACACACCCAACTTCGCCTCACCAGTCATCACTCTG...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAACGGGATGGGGAAGAGTaGGCCGATGTTGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPRERDGEE*ADVGVL
Trigger: GAGAACACCAACATCGGCTCACTCTTCCCCATCCCG...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCGGGATGGGGAAGAGTaGGCCGATGTTGGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSRDGEE*ADVGVL
Trigger: GAGAACACCAACATCGGCTCACTCTTCCCCATCCCG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGGTTGCCCATCACAATaGGCTGTGGTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPGCPSQ*AVVASP
Trigger: AGGAGAAGCAACCACAGCTCATTGTGATGGGCAACC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGGGTTGCCCATCACAATaGGCTGTGGTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SFTVTTTWARALLGLVPRGCPSQ*AVVASP
Trigger: AGGAGAAGCAACCACAGCTCATTGTGATGGGCAACC...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR TCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQIGTLV*VIGLHL
Trigger: CAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGCTGCCACCACACAGGTaGCAGCTGCATTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRLPPHR*QLHSLP
Trigger: AGGGAGAGAATGCAGCTGTCACCTGTGTGGTGGCAG...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTCCTTGTCTCCATCAATaGCAGTCACCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAPCLHQ*QSPCPL
Trigger: CAGTGGGCATGGTGACTGTCATTGATGGAGACAAGG...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR TCA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGCCTTGTCTCCATCAATaGCAGTCACCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SFTVTTTWARALLGLVPRPCLHQ*QSPCPL
Trigger: CAGTGGGCATGGTGACTGTCATTGATGGAGACAAGG...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCGTTGTCCTGCTCCACTaGGAGCTGCACCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSVVLLH*ELHLGI
Trigger: AATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAAC...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCGGGGTCAGCAGCTTGTaGGAGGTGTTAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPGVSSL*EVLEGA
Trigger: TGCCCCTTCTAACACCTCTCACAAGCTGCTGACCCC...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCGAACCGCCAGGGCGATaGGCAAGGCCACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSEPPGR*ARPRPP
Trigger: TGGTGGCCGTGGCCTTGCTCATCGCCCTGGCGGTTC...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCATGCCTGGTGGGTAGTTaGGGGGCAGGTGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREACLVGS*GAGGCG
Trigger: CCCGCATCCACCTGCCCCTCAACTACCCACCAGGCA...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCCCAGATGGCCGGCGGCTGGGAGATaGCTGGCCAGGCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: KVLIYRHCMTSREWGPRWPAAGR*LARHPA
Trigger: TGCTGGATGCCTGGCCAGTCATCTCCCAGCCGCCGG...CCATCTGGGCCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp GGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGAATCATGGGTGAGGTAACTGGATaGCCGAGTGGCCTATGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGQGDFLQGGRVLAGIMGEVTG*PSGLWG
Trigger: GCCCCATAGGCCACTCGGTCATCCAGTTACCTCACC...CATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp CCCGCTGTTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTGAGTGGTGGGTCACCCTaGCAGTTATACGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PAVPDPEMSSPGSLQSRVSGGSP*QLYGGG
Trigger: GCCCCCTCCGTATAACTGTCAGGGTGACCCACCACT...CACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTCGGGGGCTGCCATTCTaGACGAGGTCTGTGATAGAT +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPRGLPF*TRSVID
Trigger: ATCTATCACAGACCTCGTGCAGAATGGCAGCCCCCG...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCGGGGGCTGCCATTCTaGACGAGGTCTGTGATAGAT +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGARGLPF*TRSVID
Trigger: ATCTATCACAGACCTCGTGCAGAATGGCAGCCCCCG...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAACTGCAGCTCATAGGATaGCACACCGTTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAELQLIG*HTVGTS
Trigger: GCTGGTCCCAACGGTGTGGCATCCTATGAGCTGCAG...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGCGAAGGCTGCAGCTCATAGGATaGCACACCGTTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LHSRVHVPVMATSGKGRRLQLIG*HTVGTS
Trigger: GCTGGTCCCAACGGTGTGGCATCCTATGAGCTGCAG...CCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCTGGTCCTCTGCCACCTaGAGCCCAAATAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGWSSAT*SPNSSW
Trigger: CCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCA...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTGGTCCTCTGCCACCTaGAGCCCAAATAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPWSSAT*SPNSSW
Trigger: CCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCA...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCTCTCGGTCAGACACCTaGACCAGGGCCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPSRSDT*TRATAV
Trigger: GACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGA...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTTGCTCCACTGAGAGCTaGACCTGGGCATTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGCSTES*TWAFSP
Trigger: GGGGGAGAATGCCCAGGTGCAGCTCTCAGTGGAGCA...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGTCAAAGTCCTCGGCTaGCACCTGGCTGACCGTCTC +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVVKVLG*HLADRL
Trigger: GAGACGGTCAGCCAGGTGGCAGCCGAGGACTTTGAC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGCACCAAAGAGAATGTTaGCACGCTGCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQHQREC*HAAWSA
Trigger: AGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTG...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCTGGCCTCCCGCTGTCTaGAGTAGCGCACAAGAACCG +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVWPPAV*SSAQEP
Trigger: CGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCA...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCTTCCCTTGGAGGCCTTaGCACTGGGCTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPFPWRP*HWAWGH
Trigger: ATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAA...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGACGTGGTGTCCCCGGTaGCCACGAATGTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRTWCPR*PRMCLQ
Trigger: CTGCAAACACATTCGTGGGCACCGGGGACACCACGT...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCTGCCATCAGGGGTGGTaGGCTCATAGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGACHQGW*AHSDPQ
Trigger: CTGAGGATCACTATGAGCGCACCACCCCTGATGGCA...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGCGAAGGCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LHSRVHVPVMATSGKGRRPSLLC*HQGWCA
Trigger: AGCGCACCACCCCTGATGGCAGCATAGGAGAGATGG...CCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGAAGGGCTGGCCTACCTaGTTGCTGGGGTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRKGWPT*LLGYLG
Trigger: CCCCAAATACCCCAGCAAGCAGGTAGGCCAGCCCTT...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCTCATTCTCGGGGTaGTCCATCTCTCCTATGCTG +
Preference number: 4 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPGSFSG*SISPML
Trigger: CAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCC...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAGCAGTGCTAGCAGCATaGAGGGCAGCAGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPAVLAA*RAAVAV
Trigger: AACGGCTACTGCTGCCCTCCATGCTGCTAGCACTGC...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATTGTACACTACCCGAGTaGCGTGGCCTGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHCTLPE*RGLGME
Trigger: CTCCATCCCCAGGCCACGCCACTCGGGTAGTGTACA...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCGGATCACCAGGGAGCTaGTTCTGGCATTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSGSPGS*FWHSRS
Trigger: GCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCC...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAAGAGTGAGCCGATGTTaGTGTTCTCAGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPRVSRC*CSQGWP
Trigger: TGGCCATCCCTGAGAACACCAACATCGGCTCACTCT...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCCTGAAGCCAGCGGGATaGGGAAGAGTGAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: FSPASGLKLGMLSPPWSALKPAG*GRVSRC
Trigger: ACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAG...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGATGCCACACCGTTaGGACCAGCATCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPRERMPHR*DQHHGL
Trigger: CAGACCGTGATGCTGGTCCCAACGGTGTGGCATCCT...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: PTWGPGQEVHAEGVESEATSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGCCCCGGATCTCAATaGTGGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGCPGSQ*WGHCHS
Trigger: TGAATGACAATGCCCCCACCATTGAGATCCGGGGCA...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTTAGTGCTGGAGAGTaGGGGGTTGCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPVSAGE*GVARVH
Trigger: GTGGACTCTGGCAACCCCCCACTCTCCAGCACTAAC...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GTTAGAGCGATAGTGGCGGCCCAGGTCAGGGCTGCCTGGTGGGTAGTTGAGGGGAGTCACCATGCCCACTaGACTCAGTGCTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: VRAIVAAQVRAAWWVVEGSHHAH*TQCWHV
Trigger: AACATGCCAGCACTGAGTCCAGTGGGCATGGTGACT...CCCCTCAACTACCCACCAGGCAGCCCTGACCTGGGCCGCCACTATCGCTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTCAGGCTGGATAGGATaGTGCCTGTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGSGWIG*CLCHSG
Trigger: TCCAGAATGGCACAGGCACCATCCTATCCAGCCTGA...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGGATCAAAGCTCAGGCTaGATAGGATGGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SFTVTTTWARALLGLVPRDQSSG*IGWCLC
Trigger: GCACAGGCACCATCCTATCCAGCCTGAGCTTTGATC...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAGGCGTGTCCAGGCTGTaGCCCAGGAGGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALAGVSRL*PRRVSS
Trigger: GCTGGAGACCCTCCTGGGCCACAGCCTGGACACGCC...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCTGGAGGCCTTGCCACTaGGCTTGGGGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVWRPCH*AWGHTG
Trigger: ACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCA...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTTGGAGGCCTTGCCACTaGGCTTGGGGGCATACAGGT +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPWRPCH*AWGHTG
Trigger: ACCTGTATGCCCCCAAGCCCAGTGGCAAGGCCTCCA...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAATCCTCGTCCTCCACTaGCTTCACGGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPILVLH*LHGLWG
Trigger: TCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGAT...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCAGGTCCTGTACCACCTaGTGCTTCTTGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGARSCTT*CFLEAE
Trigger: CTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCT...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCACTGCTCAGAGCCCGTaGACGTGGTGTCCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPTAQSP*TWCPRC
Trigger: GCACCGGGGACACCACGTCCACGGGCTCTGAGCAGT...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGGTAACTGTGCTGGGATaGGTCCTGCAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEVTVLG*VLQLLG
Trigger: GCCCAGGAGCTGCAGGACCCATCCCAGCACAGTTAC...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAGGTAGATCTCGCGCTTaGCCGTCTGGGCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSGRSRA*PSGQMP
Trigger: CGGCATCTGCCCAGACGGCCAAGCGCGAGATCTACC...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AAACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGCTGGAATGGGCCATTTaGGAGCTGGCCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLTALPGTCACHGDIRQRLEWAI*ELAGGW
Trigger: CCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAG...CCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGCGAGGGGGTGCTCCCTaGAAGTCAAGGGAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWRGGAP*KSREGA
Trigger: GGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCG...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGCTATCCCCGCCCTaGTCGGCCATGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: FSPASGLKLGMLSPPWSAMLSPP*SAMRET
Trigger: TGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCAT...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 72 bp GGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATaGCAGAGGAGCCCTCTTGGGCATCAGATGGGGGAA +
Preference number: 4 (lower is better)
Translates to: GAPWKSREGAQS*QRSPLGHQMGE
Trigger: TTCCCCCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCTGGTGTCAAGCACGGTaGCACGCAGCAGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPWCQAR*HAAGHC
Trigger: GCAGTGCCCTGCTGCGTGTCACCGTGCTTGACACCA...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCTGGCCTTCACCTGGATaGCCGAGTGGCCTATGGGGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPWPSPG*PSGLWG
Trigger: GCCCCATAGGCCACTCGGTCATCCAGGTGAAGGCCA...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCIGTLV*VIGLHL
Trigger: CAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCGGTCCACCGGGCCCTaGACAGTGATAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKRSTGP*TVISPV
Trigger: CACTGGACTTATCACTGTTCAGGGCCCGGTGGACCG...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp GGTGGCAGGTCCTGTACCACCTGGTGCTTCTTGGAGGCTGAGGGTGACTGGGGCCAGCATCACTGGCAGTaGTCTCAGCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: GGRSCTTWCFLEAEGDWGQHHWQ*SQQSLH
Trigger: GTGAAGTGATTGCTGAGATCACTGCCAGTGATGCTG...GCCCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGGTTGTCCTGCTCCACTaGGAGCTGCACCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEVVLLH*ELHLGI
Trigger: AATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAAC...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGGGGTCAGCAGCTTGTaGGAGGTGTTAGAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHGVSSL*EVLEGA
Trigger: TGCCCCTTCTAACACCTCTCACAAGCTGCTGACCCC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCTCTCCTTCTCCAGGGTaGTGGCACCTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSSPSPG*WHLNVT
Trigger: GGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGA...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGCTGGGAGATGGAAATaGGGGGAGAGGACCTGGACC +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKAGRWK*GERTWT
Trigger: GGTCCAGGTCCTCTCCCCTCATTTCCATCTCCCAGC...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAAATCCGTGTGCCCGGTaGGGCACTAAGGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRENPCAR*GTKAPP
Trigger: AGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATT...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGAAGGTGACGCGGCGGTaGGGTAACTGGATGACCGAG +
Preference number: 4 (lower is better)
Translates to: NSLHSRVHVPVMATSGKGKVTRR*GNWMTE
Trigger: CTCGGTCATCCAGTTACCTCACCGCCGCGTCACCTT...CCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCAAATGTCACCTGTCTTaGCATCCACGCGAAGGTACG +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGKCHLS*HPREGT
Trigger: CGTACCTTCGCGTGGATGGCAAGACAGGTGACATTT...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGCTAGCAGCCGGGGGCTaGCATTCTGCACGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQELAAGG*HSARGL
Trigger: CAGACCTCGTGCAGAATGGCAGCCCCCGGCTGCTAG...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCTGCAGCTCATAGGATaGCACACCGTTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRLQLIG*HTVGTS
Trigger: GCTGGTCCCAACGGTGTGGCATCCTATGAGCTGCAG...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTACAATGAGCTGTGGTTaGTTCTCCTCCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLATMSCG*FSSWSS
Trigger: AGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGT...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCTGAGAAGCGCAGGGTaGTTAGGTCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHLRSAG*LGPHGP
Trigger: TGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAG...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCGAGTCACTAGCCCTATaGCCCGGATCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPESLAL*PGSQWW
Trigger: CCACCATTGAGATCCGGGGCATAGGGCTAGTGACTC...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCGAGTCACTAGCCCTATaGCCCGGATCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTESLAL*PGSQWW
Trigger: CCACCATTGAGATCCGGGGCATAGGGCTAGTGACTC...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR GCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCACACAGGTGACAGCTaGATTCTCTCCCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLHTGDS*ILSLIS
Trigger: CGAGATGAGGGAGAGAATGCAGCTGTCACCTGTGTG...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCACTGCCCCGGTCAGCTaGCACCACCTTCAACTCATA +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPTAPVS*HHLQLI
Trigger: TATGAGTTGAAGGTGGTGGCAGCTGACCGGGGCAGT...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTTAGAGCGATAGTGGCGGCCCAGGTCAGGGCTGCCTGGTGGGTAGTTGAGGGGGGTTGCCACCTGCAATaGTGTAGATCAGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VRAIVAAQVRAAWWVVEGGCHLQ*CRSAQH
Trigger: ATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACC...CCCCTCAACTACCCACCAGGCAGCCCTGACCTGGGCCGCCACTATCGCTCTAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCAACTTGAGGGACTTCTaGAGCCCGGCCTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPNLRDF*SPASSS
Trigger: CGAGGATGAGGCCGGGCTGCAGAAGTCCCTCAAGTT...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGGAGGGTGACTGGGGCTaGAGCTGGATGGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKEGDWG*SWMEGS
Trigger: ACTGCCTTCCATCCAGCTGCAGCCCCAGTCACCCTC...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAATCCTGTACCACCTGGTaGTTCTTGGAGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAESCTTW*FLEAEG
Trigger: ACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGA...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCGCCCACGAATGTGTTTaGAGGTGGCAGGTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGAHECV*RWQVLY
Trigger: GTACAGGACCTGCCACCTGCAAACACATTCGTGGGC...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCGCCCACGAATGTGTTTaGAGGTGGCAGGTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSAHECV*RWQVLY
Trigger: GTACAGGACCTGCCACCTGCAAACACATTCGTGGGC...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGGCCCTGAGGATGACTTaGTGGACGGCGTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEALRMT*WTASQT
Trigger: AGTCTGAGACGCCGTCCAGCAAGTCATCCTCAGGGC...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGCCCTGAGGATGACTTaGTGGACGGCGTCTCAGACT +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHALRMT*WTASQT
Trigger: AGTCTGAGACGCCGTCCAGCAAGTCATCCTCAGGGC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCT +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVPSLLC*HQGWCA
Trigger: AGCGCACCACCCCTGATGGCAGCATAGGAGAGATGG...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHAPSLL*CHQGWC
Trigger: GCACCACCCCTGATGGCAGCATAGGAGAGATGGAGC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCAGGTGGCCGAGTCCTTaGAGGAATCATGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: EGVLPGSQGKEPSHCRGARWPSP*RNHGYC
Trigger: ACAGTAGCCATGATTCCTGCAAGGACTCGGCCACCT...GGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGCCCAAATCGAGGGGGTaGTCCCTGGAAGTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSPKSRG*SLEVKG
Trigger: TCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGG...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGGAGTTAGAAGTACGCTaGCCACCCTTGACTCCACCA +
Preference number: 4 (lower is better)
Translates to: SPRSGSGGFPPRWPSPCRELEVR*PPLTPP
Trigger: TGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTC...CCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAACTACCCGAGTGGCGTaGCCTGGGGATGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPTTRVA*PGDGAS
Trigger: GCTGGCTCCATCCCCAGGCCACGCCACTCGGGTAGT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGTGTACACTACCCGAGTaGCGTGGCCTGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWCTLPE*RGLGME
Trigger: CTCCATCCCCAGGCCACGCCACTCGGGTAGTGTACA...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCTCTTGTACTTCTATCTaGCCCTCTAGCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSSCTSI*PSSSRG
Trigger: CCCCCGGCTGCTAGAGGGCCAGATAGAAGTACAAGA...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGAGGATGCCACACCGTTaGGACCAGCATCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERRMPHR*DQHHGL
Trigger: CAGACCGTGATGCTGGTCCCAACGGTGTGGCATCCT...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCAGCCCAAATAGCTCCTaGGCCTCAGGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPSPNSS*ASGPAC
Trigger: GCAGGCTGGGCCTGAGGCCCAGGAGCTATTTGGGCT...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGCATCACAATGAGCTGTaGTTGCTTCTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SFTVTTTWARALLGLVPRHHNEL*LLLLLV
Trigger: GACCAGGAGGAGAAGCAACCACAGCTCATTGTGATG...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAAGGGCCGCTCAAACTTaGGGGCGTTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPRAAQT*GRCHWC
Trigger: ACACCAATGACAACGCCCCCAAGTTTGAGCGGCCCT...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCACGGTCACAACCACCTaGGCACGGGCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFTVTTT*ARALLG
Trigger: CCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCACTGCCTGTCTCACTaGCCTGGCGCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPHCLSH*PGAAGR
Trigger: CCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTG...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGGTTAGTGCTGGAGAGTaGGGGGTTGCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRVSAGE*GVARVH
Trigger: GTGGACTCTGGCAACCCCCCACTCTCCAGCACTAAC...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAACTGAGAGCTGCACCTaGGCATTCTCCCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPTESCT*AFSPLS
Trigger: AGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGT...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTTGTTGCCACGCTGCTTaGAGCGCTCATATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLACCHAA*SAHILD
Trigger: ATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACA...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp CCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTTGTTGCCACGCTGCTTaGAGCGCTCATATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PSRSQPPGHGHSWGWCLGCCHAA*SAHILD
Trigger: ATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACA...ACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAATGGCTTCACGGGCTTTaGGGACTTGCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ALQGATGGQEFPLGAPREWLHGL*GLALLA
Trigger: GGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCA...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACAGGTCAGGGCTGCCTaGTGGGTAGTTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAQVRAA*WVVEGQ
Trigger: CTGCCCCTCAACTACCCACCAGGCAGCCCTGACCTG...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACTGCTCAGAGCCCGTaGACGTGGTGTCCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: TPHNFGRLVECVFDFCIGTAQSP*TWCPRC
Trigger: GCACCGGGGACACCACGTCCACGGGCTCTGAGCAGT...GCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPRSGSGGFPPRWPSPCRYMCLS*RHQAKG
Trigger: GCCCTTTGCCTGATGTCGCCATGACAGGCACATGTA...CCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTCAGCATGTGTCAGAGTaGCCAAACTCACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHAQHVSE*PNSLHS
Trigger: GGAGTGCAGTGAGTTTGGCCACTCTGACACATGCTG...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGAGTGATACCCCCACTTaGGGCCCTGGCCAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: NSLHSRVHVPVMATSGKGSDTPT*GPGQEV
Trigger: GACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACT...CCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCATGCTATCCCCGCCCTaGTCGGCCATGAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVMLSPP*SAMRET
Trigger: TGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCAT...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAACACCTCGGTCCAGATaGCTCCGTGGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQTPRSR*LRGRGG
Trigger: CCCACCCCTACCACGGAGCCATCTGGACCGAGGTGT...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCAGGGTCCAGGGACTTaGCAAATCACAGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSQGPGT*QITGLS
Trigger: GGAGAGACCTGTGATTTGCCAAGTCCCTGGACCCTG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCTGCGAGGCTCCCAATaGGGGTGTTGGGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPLRGSQ*GCWVAV
Trigger: AACAGCCACCCAACACCCTCATTGGGAGCCTCGCAG...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp AAACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGCTGCGAGGCTCCCAATaGGGGTGTTGGGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: KLTALPGTCACHGDIRQRLRGSQ*GCWVAV
Trigger: AACAGCCACCCAACACCCTCATTGGGAGCCTCGCAG...CCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCGGTTGCCCATCACAATaGGCTGTGGTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPGCPSQ*AVVASP
Trigger: AGGAGAAGCAACCACAGCTCATTGTGATGGGCAACC...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGGGTTGCCCATCACAATaGGCTGTGGTTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRGCPSQ*AVVASP
Trigger: AGGAGAAGCAACCACAGCTCATTGTGATGGGCAACC...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp GTCCACCGGGCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGCGGTCCACCGGGCCCTaGACAGTGATAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VHRALNSDKSSVPVQSKKRSTGP*TVISPV
Trigger: CACTGGACTTATCACTGTTCAGGGCCCGGTGGACCG...CTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGCCCGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR TCA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGCATGTTCTCCATCACTaGGAAGTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RSVIPPLGALARKSTLKGHVLHH*EVVATQ
Trigger: CTGAGTGGCTACAACTTCTCAGTGATGGAGAACATG...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CCACCACCTTCAACTCATAGCTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCAGACACCAACGTAAGCTaGGCGAGGTGGGACGCCACC +
Preference number: 4 (lower is better)
Translates to: PPPSTHSSPAVPDPEMSSDTNVS*ARWDAT
Trigger: GGTGGCGTCCCACCTCGCTCAGCTTACGTTGGTGTC...TGAAGACATCTCTGGATCGGGAACAGCGGGAGAGCTATGAGTTGAAGGTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGTACGCTGCCCACCCTTaGCTCCACCATCTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWYAAHP*LHHLPK
Trigger: TTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTA...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGGGGGCTGGGGTGTGCTaGGCTGAAAGGGCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: TTSGAWWNVYSISALAPWGAGVC*AERAGL
Trigger: TAGGCCAGCCCTTTCAGCTCAGCACACCCCAGCCCC...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCCTAGCAGCCGGGGGCTaGCATTCTGCACGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSLAAGG*HSARGL
Trigger: CAGACCTCGTGCAGAATGGCAGCCCCCGGCTGCTAG...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGTGGTCCTCTGCCACCTaGAGCCCAAATAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSLHSRVHVPVMATSGKGWSSAT*SPNSSW
Trigger: CCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCA...CCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp ACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCACTACAATGAGCTGTGGTTaGTTCTCCTCCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TTWARALLGLVPRSLASTTMSCG*FSSWSS
Trigger: AGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGT...AGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR GCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCTGAGAAGCGCAGGGTaGTTAGGTCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYLRSAG*LGPHGP
Trigger: TGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCAGCGGGGTGGTAGTCTaGAGGAAATACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EKGQRGHEVSDTPTWGPGSGVVV*RKYFFL
Trigger: CAAGAAGAAGTATTTCCTGCAGACTACCACCCCGCT...GCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCTTGACGTCCACCACCTaGACCTTGAGGGAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTLTSTT*TLRELV
Trigger: CACTAACTCCCTCAAGGTGCAGGTGGTGGACGTCAA...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGGCCCACTGGACTCAGTaGTGGCATGTTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRAHWTQ*WHVLHH
Trigger: GTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGC...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATAAGTCACCGTTGTCCTaGTCCACTGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHKSPLS*STESCT
Trigger: GGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTT...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp GTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGCAGTGATATAGGGTaGGTTGTCATTCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: VRCPPLTPPSAQIEGVLPGSDIG*VVILVQ
Trigger: CTGGACGAGAATGACAACGCACCCTATATCACTGCC...AGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGCACCAAAGAGAATGTTaGCACGCTGCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRHQREC*HAAWSA
Trigger: AGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTG...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATGGCCTCCCGCTGTCTaGAGTAGCGCACAAGAACCG +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPREWPPAV*SSAQEP
Trigger: CGGTTCTTGTGCGCTACTGCAGACAGCGGGAGGCCA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTCGGGCTTTGGGGACTTaGTCTTCTTGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHARALGT*SSCLCF
Trigger: AAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCG...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCCGGGCTTTGGGGACTTaGTCTTCTTGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCRALGT*SSCLCF
Trigger: AAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCG...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTTCCTGTACCACCTGGTaGTTCTTGGAGGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPSCTTW*FLEAEG
Trigger: ACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGA...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGCCCACGAATGTGTTTaGAGGTGGCAGGTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGAHECV*RWQVLY
Trigger: GTACAGGACCTGCCACCTGCAAACACATTCGTGGGC...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCAGGTCATTCTCGGGGTaGTCCATCTCTCCTATGCTG +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPRSFSG*SISPML
Trigger: CAGCATAGGAGAGATGGAGCACCCCGAGAATGACCT...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATACTCCCGGGTACATGTaGCTGTCATGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHTPGYM*LSWRHQ
Trigger: CTGATGTCGCCATGACAGGCACATGTACCCGGGAGT...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGAAGGAGCCCAGTCATTaGAGAGGAGCCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKKEPSH*RGALLG
Trigger: GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTT...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGAATCATGCTTGACTCCACCATCTaGCCAAATCGAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: GLGQGDFLQGGRVLAGIMLDSTI*PNRGGA
Trigger: AGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAG...CATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCCACTTACGCTCACCTaGCTACCACCCCCAACCCAT +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYPLTLT*LPPPTH
Trigger: ATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATGTACACTACCCGAGTaGCGTGGCCTGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRECTLPE*RGLGME
Trigger: CTCCATCCCCAGGCCACGCCACTCGGGTAGTGTACA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCAGGGAGCTGGTTCTaGCATTCACGGAGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAPGSWF*HSRSPS
Trigger: TGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGG...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGAGTGAGCCGATGTTaGTGTTCTCAGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSRVSRC*CSQGWP
Trigger: TGGCCATCCCTGAGAACACCAACATCGGCTCACTCT...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCAGAGTGAGCCGATGTTaGTGTTCTCAGGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLRVSRC*CSQGWP
Trigger: TGGCCATCCCTGAGAACACCAACATCGGCTCACTCT...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGCTGAAGCCAGCGGGATaGGGAAGAGTGAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKLKPAG*GRVSRC
Trigger: ACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAG...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp ACCACACCAAAGAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTGGATCCGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: TTPKRMLPRCLERSYSGSGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...GGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCCCGGATCTCAATGGTaGGGGCATTGTCATTCATGT +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLPGSQW*GHCHSC
Trigger: ACATGAATGACAATGCCCCCACCATTGAGATCCGGG...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp ACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCCCCGGATCTCAATGGTaGGGGCATTGTCATTCATGT +
Preference number: 4 (lower is better)
Translates to: TTTWARALLGLVPRSLASPGSQW*GHCHSC
Trigger: ACATGAATGACAATGCCCCCACCATTGAGATCCGGG...GCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGACTGAGAGCTGCACCTaGGCATTCTCCCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRTESCT*AFSPLS
Trigger: AGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGT...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CTCATCTCGGTCAGACACCTGCACCAGGGCCACAGCTGTCTCCTCTGCCACATCTCAGGCTGGATAGGATaGTGCCTGTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LISVRHLHQGHSCLLCHISGWIG*CLCHSG
Trigger: TCCAGAATGGCACAGGCACCATCCTATCCAGCCTGA...GATGTGGCAGAGGAGACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCGATCAAAGCTCAGGCTaGATAGGATGGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSDQSSG*IGWCLC
Trigger: GCACAGGCACCATCCTATCCAGCCTGAGCTTTGATC...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACGGTGTAGCCCATGGTaGCGCCGCTCAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREARCSPW*RRSISF
Trigger: GAAGGAGATTGAGCGGCGCCACCATGGGCTACACCG...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAGGAGCGCTCATATTCTaGATCCCCAGCAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: RWASPGAARENKASAPLPGALIF*IPSNVN
Trigger: ATTGACATTGCTGGGGATCCAGAATATGAGCGCTCC...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCCCTGGTAACCACTTTTaGCCTCCCGCTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVPGNHF*PPAVCS
Trigger: ACTGCAGACAGCGGGAGGCCAAAAGTGGTTACCAGG...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCCCTTGCCACTGGGCTTaGGGGCATACAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRPCHWA*GHTGPW
Trigger: CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGG...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTGCTTTTGTTTCCCTTaGAGGCCTTGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPCFCFP*RPCHWA
Trigger: AGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCA...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTTGGCTTCACGGGCTTTaGGGACTTGCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPWLHGL*GLALLA
Trigger: GGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCA...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGATCCTCGTCCTCCACTaGCTTCACGGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKILVLH*LHGLWG
Trigger: TCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGAT...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCCTGGATGGAAGGCAGTaGGGAGTTAGAGCGATAGTG +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPLDGRQ*GVRAIV
Trigger: CACTATCGCTCTAACTCCCCACTGCCTTCCATCCAG...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGGTCCTGTACCACCTaGTGCTTCTTGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPRSCTT*CFLEAE
Trigger: CTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCT...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTCAGAGCCCGTGGACGTaGTGTCCCCGGTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSQSPWT*CPRCPR
Trigger: TCGTGGGCACCGGGGACACCACGTCCACGGGCTCTG...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGCAGATGCCGGTGTaGCTGCGGGTGGGAAGTCCG +
Preference number: 4 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMGQMPV*LRVGSP
Trigger: CGGACTTCCCACCCGCAGCCACACCGGCATCTGCCC...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGAGTGAGGCCCTGGAATaGGCCATTTGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQESEALE*AIWELA
Trigger: GGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAGACCTGGACCCTGCATaGGAGAAGGGCCAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPDLDPA*EKGQRG
Trigger: ACCACGCTGGCCCTTCTCCCATGCAGGGTCCAGGTC...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGCTCTTGGGCATCAGATaGGGGAAGCCCCATAAAGGG +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERLLGIR*GKPHKG
Trigger: CCCTTTATGGGGCTTCCCCCATCTGATGCCCAAGAG...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp AATCATGGCTACTGTGGGAGAAGGCACTGTAGGAGGGCAGGAGGCGCACGGGGGAACTGGATGACCGAGTaGCCTATGGGGCTATTCTCA +
Preference number: 4 (lower is better)
Translates to: NHGYCGRRHCRRAGGARGNWMTE*PMGLFS
Trigger: TGAGAATAGCCCCATAGGCCACTCGGTCATCCAGTT...CCCCCGTGCGCCTCCTGCCCTCCTACAGTGCCTTCTCCCACAGTAGCCATGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCTGGATGACCGAGTaGCCTATGGGGCTATTCTCA +
Preference number: 4 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCLWMTE*PMGLFS
Trigger: TGAGAATAGCCCCATAGGCCACTCGGTCATCCAGAG...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCTCATTGGCCTTCACCTaGTTGGGTGGGCTCCCATTT +
Preference number: 4 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTSLAFT*LGGLPF
Trigger: AAATGGGAGCCCACCCAACCAGGTGAAGGCCAATGA...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 72 bp TGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTaGCAGGAATCATGGCTACTGTGGGAGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: WVRGISSKVAES*QESWLLWEKAL
Trigger: CAGTGCCTTCTCCCACAGTAGCCATGATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR TCA 90 bp ACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCAGAGTGATGACTGGTaGGGCGAAGTTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: TPPSAQIEGVLPGSQGKEQSDDW*GEVGCV
Trigger: AACACACCCAACTTCGCCTCACCAGTCATCACTCTG...CTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp CCCGCTGTTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTGACCTCAGTGACACTCTaGGTGAAGACAGGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: PAVPDPEMSSPGSLQSRVTSVTL*VKTGAL
Trigger: CAACGCACCTGTCTTCACTCAGAGTGTCACTGAGGT...CACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGTGCAGTCCAGCACATTaGCAAGGACAGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQCSPAH*QGQWLC
Trigger: GCACAGCCACTGTCCTTGTCAATGTGCTGGACTGCA...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGCCTTGTCTCCATCAATaGCAGTCACCATGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERPCLHQ*QSPCPL
Trigger: CAGTGGGCATGGTGACTGTCATTGATGGAGACAAGG...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCACCTAGGTCTGGTCTaGCATAGAGACCTAGGTTTG +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSHLGLV*HRDLGL
Trigger: CAAACCTAGGTCTCTATGTCAGACCAGACCTAGGTG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGAAAACCATAGTCGGCTaGGAGGCTCCCAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERKTIVG*EAPNEG
Trigger: ACCCTCATTGGGAGCCTCGCAGCCGACTATGGTTTT...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCAAAACCATAGTCGGCTaGGAGGCTCCCAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPKTIVG*EAPNEG
Trigger: ACCCTCATTGGGAGCCTCGCAGCCGACTATGGTTTT...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCTCTAGCTTGTACAGGTaGCCCACATCTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: PPSAQIEGVLPGSQGKEPSSLYR*PTSGKP
Trigger: TGGTTTTCCAGATGTGGGGCACCTGTACAAGCTAGA...GGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AGTCCGAGGTCTGGGTCAGGGGGATTTCCTCCAAGGTGGCCGAGTCCTTGCAGGTCTAGCTTGTACAGGTaGCCCACATCTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: SPRSGSGGFPPRWPSPCRSSLYR*PTSGKP
Trigger: TGGTTTTCCAGATGTGGGGCACCTGTACAAGCTAGA...CCTGCAAGGACTCGGCCACCTTGGAGGAAATCCCCCTGACCCAGACCTCGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR GCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCGGGGGCTGCCATTCTaGACGAGGTCTGTGATAGAT +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYRGLPF*TRSVID
Trigger: ATCTATCACAGACCTCGTGCAGAATGGCAGCCCCCG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCACAATGAGCTGTGGTTaGTTCTCCTCCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLTMSCG*FSSWSS
Trigger: AGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGT...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCCTGAGAAGCGCAGGGTaGTTAGGTCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFLRSAG*LGPHGP
Trigger: TGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAG...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR GCA 90 bp CCACCACCTTCAACTCATAGCTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCATCTCGGTCAGACACCTaGACCAGGGCCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PPPSTHSSPAVPDPEMSSSRSDT*TRATAV
Trigger: GACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGA...TGAAGACATCTCTGGATCGGGAACAGCGGGAGAGCTATGAGTTGAAGGTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCGAAGGGCACATCACCTaGCACCACACAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPEGHIT*HHTGDS
Trigger: GCTGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTC...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGAAGGGCACATCACCTaGCACCACACAGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFEGHIT*HHTGDS
Trigger: GCTGTCACCTGTGTGGTGGCAGGTGATGTGCCCTTC...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGGAAATACTTCTTCTTaGTGTCACTGCCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAGNTSS*CHCLSH
Trigger: GTGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGAGCGGGGTGGTAGTCTaGAGGAAATACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLSGVVV*RKYFFL
Trigger: CAAGAAGAAGTATTTCCTGCAGACTACCACCCCGCT...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCTTGACGTCCACCACCTaGACCTTGAGGGAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVLTSTT*TLRELV
Trigger: CACTAACTCCCTCAAGGTGCAGGTGGTGGACGTCAA...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATGACGCCACCATCCACTaGCTTCAGCTGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYDATIH*LQLEGV
Trigger: TACACCTTCCAGCTGAAGGCAGTGGATGGTGGCGTC...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCCGGGCTTTGGGGACTTaGTCTTCTTGCCTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPRALGT*SSCLCF
Trigger: AAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCG...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGTGGCCAAACTCACTaGACTCCCGGGTACATGTGC +
Preference number: 4 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSSGQTH*TPGYMC
Trigger: GCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACT...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAAGGGAGTTAGAAGTACGCTaGCCACCCTTGACTCCACCA +
Preference number: 4 (lower is better)
Translates to: LQGATGGQEFPLGAPRERELEVR*PPLTPP
Trigger: TGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTC...CCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGATGTGTTTAGAACGGTaGCTGGCACCTAGGCTATTA +
Preference number: 4 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASMCLER*LAPRLL
Trigger: TAATAGCCTAGGTGCCAGGCACCGTTCTAAACACAT...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAATCAGGTGCTCCATCCTaGGAGGCCCCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQSGAPS*EAPESG
Trigger: TCCTGATTCTGGGGCCTCCCAGGATGGAGCACCTGA...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCTGAAGCCAGCGGGATaGGGAAGAGTGAGCCGATGT +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPLKPAG*GRVSRC
Trigger: ACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAG...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAAGGATGCCACACCGTTaGGACCAGCATCACGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQRMPHR*DQHHGL
Trigger: CAGACCGTGATGCTGGTCCCAACGGTGTGGCATCCT...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGAGCCCAAATAGCTCCTaGGCCTCAGGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TTSGAWWNVYSISALAPWSPNSS*ASGPAC
Trigger: GCAGGCTGGGCCTGAGGCCCAGGAGCTATTTGGGCT...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCACCTGGATGACCGAGTaGCCTATGGGGCTATTCTCA +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVTWMTE*PMGLFS
Trigger: TGAGAATAGCCCCATAGGCCACTCGGTCATCCAGGT...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATTCATTGGCCTTCACCTaGATGACCGAGTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHSLAFT*MTEWPM
Trigger: CATAGGCCACTCGGTCATCCAGGTGAAGGCCAATGA...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCTCATTGGCCTTCACCTaGATGACCGAGTGGCCTATG +
Preference number: 4 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPSLAFT*MTEWPM
Trigger: CATAGGCCACTCGGTCATCCAGGTGAAGGCCAATGA...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLTSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 4 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLTTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCCCCGGATCTCAATGGTaGGGGCATTGTCATTCATGT +
Preference number: 4 (lower is better)
Translates to: PALVGHEGNNELEVRCPPPGSQW*GHCHSC
Trigger: ACATGAATGACAATGCCCCCACCATTGAGATCCGGG...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCAGAGATGTCTTCACCTaGATCTCTCCAGTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTRDVFT*ISPVSG
Trigger: ACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCT...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGAGTCACCATGCCCACTaGACTCAGTGCTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRSHHAH*TQCWHV
Trigger: AACATGCCAGCACTGAGTCCAGTGGGCATGGTGACT...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGTGCCTGTGCCATTCTaGATAACAAAGTCACCGTTG +
Preference number: 4 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHAVPVPF*ITKSPL
Trigger: CAACGGTGACTTTGTTATCCAGAATGGCACAGGCAC...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCACTGTGCCTGTGCCATTCTaGATAACAAAGTCACCGTTG +
Preference number: 4 (lower is better)
Translates to: TTWARALLGLVPRSLASTVPVPF*ITKSPL
Trigger: CAACGGTGACTTTGTTATCCAGAATGGCACAGGCAC...AGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGTCAGGCTGGATAGGATaGTGCCTGTGCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRSGWIG*CLCHSG
Trigger: TCCAGAATGGCACAGGCACCATCCTATCCAGCCTGA...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCCTCGGCTGCCACCTaGCTGACCGTCTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSSSAAT*LTVSPR
Trigger: TCTTGGTGAGACGGTCAGCCAGGTGGCAGCCGAGGA...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACGGTGTAGCCCATGGTaGCGCCGCTCAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPRCSPW*RRSISF
Trigger: GAAGGAGATTGAGCGGCGCCACCATGGGCTACACCG...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CTCAGCAATCACTTCACCAGGCTTGTTGTTTTCCGGGAAGGCGACCTCAGTGACCGGTGTAGCCCATGGTaGCGCCGCTCAATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LSNHFTRLVVFREGDLSDRCSPW*RRSISF
Trigger: GAAGGAGATTGAGCGGCGCCACCATGGGCTACACCG...GTCACTGAGGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGATTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCTGTTGCCACGCTGCTTaGAGCGCTCATATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGCCHAA*SAHILD
Trigger: ATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACA...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCCTGGTAACCACTTTTaGCCTCCCGCTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYPGNHF*PPAVCS
Trigger: ACTGCAGACAGCGGGAGGCCAAAAGTGGTTACCAGG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGGGCATACAGGTCCTTaGTCTCCTTCTTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVGHTGP*SPSYQP
Trigger: AGGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CCACCACCTTCAACTCATAGCTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCACCTTGCCACTGGGCTTaGGGGCATACAGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPPSTHSSPAVPDPEMSSPCHWA*GHTGPW
Trigger: CCAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGG...TGAAGACATCTCTGGATCGGGAACAGCGGGAGAGCTATGAGTTGAAGGTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp AGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGGCTTCACGGGCTTTaGGGACTTGCTCTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SVPVQSKKTPHNFGRLVEWLHGL*GLALLA
Trigger: GGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCA...TTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGAATGTGTTTGCAGGTaGCAGGTCCTGTACCACCTG +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHECVCR*QVLYHL
Trigger: CAGGTGGTACAGGACCTGCCACCTGCAAACACATTC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTGAATGTGTTTGCAGGTaGCAGGTCCTGTACCACCTG +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPECVCR*QVLYHL
Trigger: CAGGTGGTACAGGACCTGCCACCTGCAAACACATTC...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGCTGAGGATGACTTGCTaGACGGCGTCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQLRMTC*TASQTP
Trigger: AGGAGTCTGAGACGCCGTCCAGCAAGTCATCCTCAG...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGGATTTCCTCCAAGGTaGCCGAGTCCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHGFPPR*PSPCRN
Trigger: ATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCGGGAAGTCCGAGGTCTaGGTCAGGGGGATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSGKSEV*VRGISS
Trigger: GGAGGAAATCCCCCTGACCCAGACCTCGGACTTCCC...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGTCGCGCTTGGCCGTCTaGGCAGATGCCGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMSRLAV*ADAGVA
Trigger: AGCCACACCGGCATCTGCCCAGACGGCCAAGCGCGA...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGCAGAGTGATGACTGGTaGGGCGAAGTTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKQSDDW*GEVGCV
Trigger: AACACACCCAACTTCGCCTCACCAGTCATCACTCTG...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYIGTLV*VIGLHL
Trigger: CAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACTGCCACCACACAGGTaGCAGCTGCATTCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALALPPHR*QLHSLP
Trigger: AGGGAGAGAATGCAGCTGTCACCTGTGTGGTGGCAG...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCCAATGGTGTAGTCTTTaGCCTTCTCGTAGTCTAGCG +
Preference number: 4 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSQWCSL*PSRSLA
Trigger: CGCTAGACTACGAGAAGGTCAAAGACTACACCATTG...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGCAGCATCACTGGCAGTaGTCTCAGCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSQHHWQ*SQQSLH
Trigger: GTGAAGTGATTGCTGAGATCACTGCCAGTGATGCTG...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATGCAGTCCAGCACATTaGCAAGGACAGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRECSPAH*QGQWLC
Trigger: GCACAGCCACTGTCCTTGTCAATGTGCTGGACTGCA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAAGATCAGCTCAGCATTaGCACCAGAGTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPRSAQH*HQSQSP
Trigger: AGGACTTTGACTCTGGTGTCAATGCTGAGCTGATCT...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp GCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCTTGCCGCGGTCACTaGCCTTCACCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: AWWNVYSISALAPWSESLACRGH*PSPPGG
Trigger: ACCGCCTGGTGGTGAAGGTCAGTGACCGCGGCAAGC...CAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCATGGCCAGAGTCTCATTaGCATAAAGATGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPWPESH*HKDGPR
Trigger: CCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCA...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR TCA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGGCTGGGAGATGGAAATaGGGGGAGAGGACCTGGACC +
Preference number: 4 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGAGRWK*GERTWT
Trigger: GGTCCAGGTCCTCTCCCCTCATTTCCATCTCCCAGC...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCATCTAGCTTGTACAGGTaGCCCACATCTGGAAAACCA +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPSSLYR*PTSGKP
Trigger: TGGTTTTCCAGATGTGGGGCACCTGTACAAGCTAGA...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACTGGTCCTCTGCCACCTaGAGCCCAAATAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALNSDKSSVPVQSKKTPHWSSAT*SPNSSW
Trigger: CCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCA...GTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR GCA 90 bp GCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACCTGAGAAGCGCAGGGTaGTTAGGTCCTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: ALNSDKSSVPVQSKKTPHLRSAG*LGPHGP
Trigger: TGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAG...GTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR GCA 90 bp CAGCGTGCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCGAGTCACTAGCCCTATaGCCCGGATCTCAATGGTGG +
Preference number: 4 (lower is better)
Translates to: QRAVGQSLIDIKMDQGCAESLAL*PGSQWW
Trigger: CCACCATTGAGATCCGGGGCATAGGGCTAGTGACTC...GGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGCACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGTCTCGGTCAGACACCTaGACCAGGGCCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGSRSDT*TRATAV
Trigger: GACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGA...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTCGGTCAGACACCTaGACCAGGGCCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TTSGAWWNVYSISALAPWSRSDT*TRATAV
Trigger: GACAGCTGTGGCCCTGGTGCAGGTGTCTGACCGAGA...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR GCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAAGCGGGGTGGTAGTCTaGAGGAAATACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPSGVVV*RKYFFL
Trigger: CAAGAAGAAGTATTTCCTGCAGACTACCACCCCGCT...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR GCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCATTGACGTCCACCACCTaGACCTTGAGGGAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSLTSTT*TLRELV
Trigger: CACTAACTCCCTCAAGGTGCAGGTGGTGGACGTCAA...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp GTCCACCGGGCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGACTGCCCCGGTCAGCTaGCACCACCTTCAACTCATA +
Preference number: 4 (lower is better)
Translates to: VHRALNSDKSSVPVQSKKTAPVS*HHLQLI
Trigger: TATGAGTTGAAGGTGGTGGCAGCTGACCGGGGCAGT...CTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGCCCGGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCAAAGTCACCGTTGTCCTaGTCCACTGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAKSPLS*STESCT
Trigger: GGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTT...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGACGCCACCATCCACTaGCTTCAGCTGGAAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFDATIH*LQLEGV
Trigger: TACACCTTCCAGCTGAAGGCAGTGGATGGTGGCGTC...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGGCAGTGATATAGGGTaGGTTGTCATTCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVGSDIG*VVILVQ
Trigger: CTGGACGAGAATGACAACGCACCCTATATCACTGCC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGCAGTGATATAGGGTaGGTTGTCATTCTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGGSDIG*VVILVQ
Trigger: CTGGACGAGAATGACAACGCACCCTATATCACTGCC...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCATTCCCTTGGAGGCCTTaGCACTGGGCTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLPSAGRCRCFVALDQSSFPWRP*HWAWGH
Trigger: ATGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAA...TGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTGCCATCAGGGGTGGTaGGCTCATAGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQECHQGW*AHSDPQ
Trigger: CTGAGGATCACTATGAGCGCACCACCCCTGATGGCA...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAAGGTGGCCGAGTCCTTaGAGGAATCATGGCTACTGT +
Preference number: 4 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASRWPSP*RNHGYC
Trigger: ACAGTAGCCATGATTCCTGCAAGGACTCGGCCACCT...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGCTTGACTCCACCATCTaGCCAAATCGAGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQELDSTI*PNRGGA
Trigger: AGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAG...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp AACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGACATCAGGCAAAGGGTCCCCAGTTCAGCCCTaGTTCAGGGCTAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: NSLHSRVHVPVMATSGKGSPVQP*FRAKIG
Trigger: CCCAATTTTAGCCCTGAAGCAGGGCTGAACTGGGGA...CCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCATCACAATGAGCTGTaGTTGCTTCTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHHHNEL*LLLLLV
Trigger: GACCAGGAGGAGAAGCAACCACAGCTCATTGTGATG...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCCATCACAATGAGCTGTaGTTGCTTCTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVHHNEL*LLLLLV
Trigger: GACCAGGAGGAGAAGCAACCACAGCTCATTGTGATG...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAGTTAGTGCTGGAGAGTaGGGGGTTGCCAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALAVSAGE*GVARVH
Trigger: GTGGACTCTGGCAACCCCCCACTCTCCAGCACTAAC...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATAGAGATGTCTTCACCTaGATCTCTCCAGTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHRDVFT*ISPVSG
Trigger: ACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCT...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CAGCGTGCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCACTGAGAGCTGCACCTaGGCATTCTCCCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QRAVGQSLIDIKMDQGCATESCT*AFSPLS
Trigger: AGACAAGGGGGAGAATGCCCAGGTGCAGCTCTCAGT...GGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGCACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp ACCACACCAAAGAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTGGATCCTCCTCGGCTGCCACCTaGCTGACCGTCTCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TTPKRMLPRCLERSYSGSSSAAT*LTVSPR
Trigger: TCTTGGTGAGACGGTCAGCCAGGTGGCAGCCGAGGA...GGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAGGAGCGCTCATATTCTaGATCCCCAGCAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPGALIF*IPSNVN
Trigger: ATTGACATTGCTGGGGATCCAGAATATGAGCGCTCC...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CCA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCCACCTGGTGCTTCTTaGAGGCTGAGGGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGPPGAS*RLRVTG
Trigger: CCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGG...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCATACATGTGCCTGTCATaGCGACATCAGGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSYMCLS*RHQAKG
Trigger: GCCCTTTGCCTGATGTCGCCATGACAGGCACATGTA...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCCTCTTGGGCATCAGATaGGGGAAGCCCCATAAAGGG +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRLLGIR*GKPHKG
Trigger: CCCTTTATGGGGCTTCCCCCATCTGATGCCCAAGAG...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGGTCAAGAGTTTCCTCTaGGAGCTCCCAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQEVKSFL*ELPGKG
Trigger: CCCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGAC...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCACCTTCAGGGAGCCACTaGTGGTCAAGAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASPSGSH*WSRVSS
Trigger: AGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGG...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCAACTGCTGGCTCAGGCTaGCCCCCAACACGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSTAGSG*PPTRAG
Trigger: GCCTGCCCGTGTTGGGGGCCAGCCTGAGCCAGCAGT...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 72 bp GAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAAATCGAGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: EGNNELEVRCPP*TPPSAQIEGVL
Trigger: GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 72 bp CGGCCTCATCCTCGTCCTCCACTGGCTTCACGGGCTTaGGGGACTTGCTCTTCTTGCCTTTGCTTTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RPHPRPPLASRA*GTCSSCLCFCF
Trigger: GAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGATGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCTGGAGGTCTCGGTGGTaGAAATGTCACCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPWRSRW*KCHLSC
Trigger: GCAAGACAGGTGACATTTTCACCACCGAGACCTCCA...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCACCTCAGTGACACTCTaGGTGAAGACAGGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRTSVTL*VKTGAL
Trigger: CAACGCACCTGTCTTCACTCAGAGTGTCACTGAGGT...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAACCTCAGTGACACTCTaGGTGAAGACAGGTGCGTTG +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQTSVTL*VKTGAL
Trigger: CAACGCACCTGTCTTCACTCAGAGTGTCACTGAGGT...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp GCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCATAGCGTGCAGTCCAGCACATTaGCAAGGACAGTGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: AVGQSLIDIKMDQGCAIACSPAH*QGQWLC
Trigger: GCACAGCCACTGTCCTTGTCAATGTGCTGGACTGCA...CGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCCATGTTCTCCATCACTaGGAAGTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVHVLHH*EVVATQ
Trigger: CTGAGTGGCTACAACTTCTCAGTGATGGAGAACATG...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGATCAGCTCAGCATTaGCACCAGAGTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPRSAQH*HQSQSP
Trigger: AGGACTTTGACTCTGGTGTCAATGCTGAGCTGATCT...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CTCAGCAATCACTTCACCAGGCTTGTTGTTTTCCGGGAAGGCGACCTCAGTGACTCTCCTTCTCCAGGGTaGTGGCACCTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: LSNHFTRLVVFREGDLSDSPSPG*WHLNVT
Trigger: GGTCACATTCAGGTGCCATCACCCTGGAGAAGGAGA...GTCACTGAGGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGATTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCACCACCAGGCTCTGGATaGCCGAGTGGCCTATGGGGC +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSPPGSG*PSGLWG
Trigger: GCCCCATAGGCCACTCGGTCATCCAGAGCCTGGTGG...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR GCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCAAAACCATAGTCGGCTaGGAGGCTCCCAATGAGGGT +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRKTIVG*EAPNEG
Trigger: ACCCTCATTGGGAGCCTCGCAGCCGACTATGGTTTT...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGAAATGTCACCTGTCTTaGCATCCACGCGAAGGTACG +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQKCHLS*HPREGT
Trigger: CGTACCTTCGCGTGGATGGCAAGACAGGTGACATTT...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCGGAAATACTTCTTCTTaGTGTCACTGCCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLGNTSS*CHCLSH
Trigger: GTGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCC...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAGCCCACTGGACTCAGTaGTGGCATGTTCTCCATCAC +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALAAHWTQ*WHVLHH
Trigger: GTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGC...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp ATGACAGTCACCATGCCCACTGGACTCAGTGCTGGCATGTTCTCCATCACTGAGAAGTCACCGTTGTCCTaGTCCACTGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: MTVTMPTGLSAGMFSITEKSPLS*STESCT
Trigger: GGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTT...CTCAGTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGCATGGTGACTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTGCTGGAAGGTGTAGGTaGTTTGTTGCTCTCGATCAA +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPAGRCR*FVALDQ
Trigger: TTGATCGAGAGCAACAAAGCACCTACACCTTCCAGC...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTATAAGGGTTGCCACCTaGAATGCTGTAGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGIRVAT*NAVDQL
Trigger: GAGCTGATCTACAGCATTGCAGGTGGCAACCCTTAT...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGAGAGTCCATAAGGGTTaGCACCTGCAATGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSRVHKG*HLQCCR
Trigger: TCTACAGCATTGCAGGTGGCAACCCTTATGGACTCT...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CAGCGTGCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCCACCAAAGAGAATGTTaGCACGCTGCTTGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: QRAVGQSLIDIKMDQGCAHQREC*HAAWSA
Trigger: AGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTG...GGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGCACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGAACTTGAGGGACTTCTaGAGCCCGGCCTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGNLRDF*SPASSS
Trigger: CGAGGATGAGGCCGGGCTGCAGAAGTCCCTCAAGTT...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTGAGGGTGACTGGGGCTaGAGCTGGATGGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LEESIRVATCNAVDQLSIEGDWG*SWMEGS
Trigger: ACTGCCTTCCATCCAGCTGCAGCCCCAGTCACCCTC...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAAGTGGCCAAACTCACTaGACTCCCGGGTACATGTGC +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPSGQTH*TPGYMC
Trigger: GCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTCCCCAGTTCAGCCCTaGTTCAGGGCTAAAATTGGG +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQESPVQP*FRAKIG
Trigger: CCCAATTTTAGCCCTGAAGCAGGGCTGAACTGGGGA...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAAAGGGCTGGCCTACCTaGTTGCTGGGGTATTTGGGG +
Preference number: 4 (lower is better)
Translates to: PLPSAGRCRCFVALDQSSKGWPT*LLGYLG
Trigger: CCCCAAATACCCCAGCAAGCAGGTAGGCCAGCCCTT...TGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGTCAGGTGCTCCATCCTaGGAGGCCCCAGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGSGAPS*EAPESG
Trigger: TCCTGATTCTGGGGCCTCCCAGGATGGAGCACCTGA...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPTSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCAGGGCACGGGCACTCTTaGGGTTGGTGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSGHGHS*GWCLGP
Trigger: AGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCC...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCATGCCCCGGATCTCAATaGTGGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: PLSYPQDPRSPCFPPREACPGSQ*WGHCHS
Trigger: TGAATGACAATGCCCCCACCATTGAGATCCGGGGCA...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CTCAGCAATCACTTCACCAGGCTTGTTGTTTTCCGGGAAGGCGACCTCAGTGACCCTGGTAACCACTTTTaGCCTCCCGCTGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSNHFTRLVVFREGDLSDPGNHF*PPAVCS
Trigger: ACTGCAGACAGCGGGAGGCCAAAAGTGGTTACCAGG...GTCACTGAGGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGATTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCTTTTGTTTCCCTTaGAGGCCTTGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRCFCFP*RPCHWA
Trigger: AGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCA...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCTGCTTTTGTTTCCCTTaGAGGCCTTGCCACTGGGCT +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFCFCFP*RPCHWA
Trigger: AGCCCAGTGGCAAGGCCTCCAAGGGAAACAAAAGCA...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAAGGTCCTGTACCACCTaGTGCTTCTTGGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALARSCTT*CFLEAE
Trigger: CTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCT...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCGTCAAGAGTTTCCTCTaGGAGCTCCCAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSVKSFL*ELPGKG
Trigger: CCCTTTCCCTGGGAGCTCCCAGAGGAAACTCTTGAC...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
3UTR CAA 72 bp ATGGTGCCTGTGCCATTCTGGATAACAAAGTCACCGTaGTCCTGCTCCACTGAGAGCTGCACCTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: MVPVPFWITKSP*SCSTESCTWAF
Trigger: GAATGCCCAGGTGCAGCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTATCCAGAATGGCACAGGCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 72 bp TCCTCGTCCTCCACTGGCTTCACGGGCTTTGGGGACTaGCTCTTCTTGCCTTTGCTTTTGTTTCCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSTGFTGFGD*LFLPLLLFPLE
Trigger: CTCCAAGGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAGTGGAGGACGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAACAGCATCACTGGCAGTaGTCTCAGCAATCACTTCAC +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPREQHHWQ*SQQSLH
Trigger: GTGAAGTGATTGCTGAGATCACTGCCAGTGATGCTG...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGTGGCCAGAGTCTCATTaGCATAAAGATGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKWPESH*HKDGPR
Trigger: CCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCA...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAAAATGTCACCTGTCTTaGCATCCACGCGAAGGTACG +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQKCHLS*HPREGT
Trigger: CGTACCTTCGCGTGGATGGCAAGACAGGTGACATTT...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp ATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAACACACAGGTGACAGCTaGATTCTCTCCCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: IGHAIPALVGHEGNNELEHTGDS*ILSLIS
Trigger: CGAGATGAGGGAGAGAATGCAGCTGTCACCTGTGTG...TTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGGCTGGAAGGTGTAGGTaGTTTGTTGCTCTCGATCAA +
Preference number: 4 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQAGRCR*FVALDQ
Trigger: TTGATCGAGAGCAACAAAGCACCTACACCTTCCAGC...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp AACACGGGCAGGCACAGTAAACCTGCTCCATCACTCCCACACCTCGGTCCAGATGCTGGAAGGTGTAGGTaGTTTGTTGCTCTCGATCAA +
Preference number: 4 (lower is better)
Translates to: NTGRHSKPAPSLPHLGPDAGRCR*FVALDQ
Trigger: TTGATCGAGAGCAACAAAGCACCTACACCTTCCAGC...ATCTGGACCGAGGTGTGGGAGTGATGGAGCAGGTTTACTGTGCCTGCCCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCGGTTGCCACCTGCAATaGTGTAGATCAGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPGCHLQ*CRSAQH
Trigger: ATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACC...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATATAAGGGTTGCCACCTaGAATGCTGTAGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYIRVAT*NAVDQL
Trigger: GAGCTGATCTACAGCATTGCAGGTGGCAACCCTTAT...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTGCAGTGCTAGCAGCATaGAGGGCAGCAGTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSAVLAA*RAAVAV
Trigger: AACGGCTACTGCTGCCCTCCATGCTGCTAGCACTGC...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAACCTGGATGACCGAGTaGCCTATGGGGCTATTCTCA +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPTWMTE*PMGLFS
Trigger: TGAGAATAGCCCCATAGGCCACTCGGTCATCCAGGT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCACACTGCCTGTCTCACTaGCCTGGCGCAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSHCLSH*PGAAGR
Trigger: CCTTCCAGCTGCGCCAGGCCAGTGAGACAGGCAGTG...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAAGAGATGTCTTCACCTaGATCTCTCCAGTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRERDVFT*ISPVSG
Trigger: ACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCT...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATGTGCCTGTGCCATTCTaGATAACAAAGTCACCGTTG +
Preference number: 4 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYVPVPF*ITKSPL
Trigger: CAACGGTGACTTTGTTATCCAGAATGGCACAGGCAC...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CCA 90 bp ATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGATCAAAGCTCAGGCTaGATAGGATGGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: IGHAIPALVGHEGNNELEDQSSG*IGWCLC
Trigger: GCACAGGCACCATCCTATCCAGCCTGAGCTTTGATC...TTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGGGCATACAGGTCCTTaGTCTCCTTCTTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: IGHAIPALVGHEGNNELEGHTGP*SPSYQP
Trigger: AGGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCC...TTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCACAGGTCAGGGCTGCCTaGTGGGTAGTTGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSQVRAA*WVVEGQ
Trigger: CTGCCCCTCAACTACCCACCAGGCAGCCCTGACCTG...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGTGCTGCCATCAGGGGTaGTGCGCTCATAGTGATCCT +
Preference number: 4 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGCCHQG*CAHSDP
Trigger: AGGATCACTATGAGCGCACCACCCCTGATGGCAGCA...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCAACACCTCGGTCCAGATaGCTCCGTGGTAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSTPRSR*LRGRGG
Trigger: CCCACCCCTACCACGGAGCCATCTGGACCGAGGTGT...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
3UTR CAA 72 bp TCACTGGCAGTGATCTCAGCAATCACTTCACCAGGCTaGTTGTTTTCCGGGAAGGCGACCTCAGTGACACTC +
Preference number: 4 (lower is better)
Translates to: SLAVISAITSPG*LFSGKATSVTL
Trigger: GAGTGTCACTGAGGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGATTGCTGAGATCACTGCCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCCAATGGTGTAGTCTTTaGCCTTCTCGTAGTCTAGCG +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRQWCSL*PSRSLA
Trigger: CGCTAGACTACGAGAAGGTCAAAGACTACACCATTG...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR TCA 90 bp ACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCATTGGCACCTTGGTCTaGGTCATTGGCCTTCACCTT +
Preference number: 4 (lower is better)
Translates to: TPHNFGRLVECVFDFCIGIGTLV*VIGLHL
Trigger: AAGGTGAAGGCCAATGACTCAGACCAAGGTGCCAAT...GCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR GCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAACAATGAGCTGTGGTTaGTTCTCCTCCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPTMSCG*FSSWSS
Trigger: AGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGGGAAATACTTCTTCTTaGTGTCACTGCCTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKGNTSS*CHCLSH
Trigger: GTGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCC...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGACTGCCCCGGTCAGCTaGCACCACCTTCAACTCATA +
Preference number: 4 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMTAPVS*HHLQLI
Trigger: TATGAGTTGAAGGTGGTGGCAGCTGACCGGGGCAGT...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCATAAGGGTTGCCACCTaGAATGCTGTAGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRIRVAT*NAVDQL
Trigger: GAGCTGATCTACAGCATTGCAGGTGGCAACCCTTAT...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAAGAGTCCATAAGGGTTaGCACCTGCAATGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRERVHKG*HLQCCR
Trigger: TCTACAGCATTGCAGGTGGCAACCCTTATGGACTCT...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAAAGAATGTTGCCACGCTaGTTGGAGCGCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQRMLPR*LERSYS
Trigger: AGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCT...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR GCA 90 bp GTCCACCGGGCCCTGAACAGTGATAAGTCCAGTGTTCCTGTCCAGTCGAAGAAGAGAATGTTGCCACGCTaGTTGGAGCGCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: VHRALNSDKSSVPVQSKKRMLPR*LERSYS
Trigger: AGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCT...CTTCTTCGACTGGACAGGAACACTGGACTTATCACTGTTCAGGGCCCGGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTTCTTGTACTTCTATCTaGCCCTCTAGCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSSCTSI*PSSSRG
Trigger: CCCCCGGCTGCTAGAGGGCCAGATAGAAGTACAAGA...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGTCTTGTACTTCTATCTaGCCCTCTAGCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMSCTSI*PSSSRG
Trigger: CCCCCGGCTGCTAGAGGGCCAGATAGAAGTACAAGA...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCAGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSGCFSS*SSATCS
Trigger: GCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACC...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CCA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGAGGGCCGCTCAAACTTaGGGGCGTTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMRAAQT*GRCHWC
Trigger: ACACCAATGACAACGCCCCCAAGTTTGAGCGGCCCT...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CTCAGCAATCACTTCACCAGGCTTGTTGTTTTCCGGGAAGGCGACCTCAGTGACCCCGGATCTCAATGGTaGGGGCATTGTCATTCATGT +
Preference number: 4 (lower is better)
Translates to: LSNHFTRLVVFREGDLSDPGSQW*GHCHSC
Trigger: ACATGAATGACAATGCCCCCACCATTGAGATCCGGG...GTCACTGAGGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGATTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp ACCACACCAAAGAGAATGTTGCCACGCTGCTTGGAGCGCTCATATTCTGGATCCTGCCCCGGATCTCAATaGTGGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: TTPKRMLPRCLERSYSGSCPGSQ*WGHCHS
Trigger: TGAATGACAATGCCCCCACCATTGAGATCCGGGGCA...GGATCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGGAGCGCTCATATTCTaGATCCCCAGCAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFGALIF*IPSNVN
Trigger: ATTGACATTGCTGGGGATCCAGAATATGAGCGCTCC...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGGGGCATACAGGTCCTTaGTCTCCTTCTTACCAGCCT +
Preference number: 4 (lower is better)
Translates to: TTSGAWWNVYSISALAPWGHTGP*SPSYQP
Trigger: AGGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCC...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTCTGAGGATGACTTGCTaGACGGCGTCTCAGACTCCT +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSLRMTC*TASQTP
Trigger: AGGAGTCTGAGACGCCGTCCAGCAAGTCATCCTCAG...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGCAGCATGTGTCAGAGTaGCCAAACTCACTGCACTCC +
Preference number: 4 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGQHVSE*PNSLHS
Trigger: GGAGTGCAGTGAGTTTGGCCACTCTGACACATGCTG...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGGGATTTCCTCCAAGGTaGCCGAGTCCTTGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGGFPPR*PSPCRN
Trigger: ATTCCTGCAAGGACTCGGCCACCTTGGAGGAAATCC...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CCA 90 bp CATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCCAAATCAGGCAGAAATaGGGACGTCATTCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: HAIPALVGHEGNNELEVRQIRQK*GRHSKV
Trigger: GACCTTGGAATGACGTCCCCATTTCTGCCTGATTTG...GCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGCTTCACCTGGTTGGGTaGGCTCCCATTTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: TTSGAWWNVYSISALAPWLHLVG*APISSG
Trigger: ACCACTAGAAATGGGAGCCCACCCAACCAGGTGAAG...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTTGGAGGTCTCGGTGGTaGAAATGTCACCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSWRSRW*KCHLSC
Trigger: GCAAGACAGGTGACATTTTCACCACCGAGACCTCCA...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp GCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCATAGCGCAATGGTGTAGTCTTTaGCCTTCTCGTAGTCTAGCG +
Preference number: 4 (lower is better)
Translates to: AVGQSLIDIKMDQGCAIAQWCSL*PSRSLA
Trigger: CGCTAGACTACGAGAAGGTCAAAGACTACACCATTG...CGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CCACCACCTTCAACTCATAGCTCTCCCGCTGTTCCCGATCCAGAGATGTCTTCAAGATCAGCTCAGCATTaGCACCAGAGTCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PPPSTHSSPAVPDPEMSSRSAQH*HQSQSP
Trigger: AGGACTTTGACTCTGGTGTCAATGCTGAGCTGATCT...TGAAGACATCTCTGGATCGGGAACAGCGGGAGAGCTATGAGTTGAAGGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR GCA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGGGTTGCCACCTGCAATaGTGTAGATCAGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGGCHLQ*CRSAQH
Trigger: ATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACC...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR GCA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAAGAATGTTGCCACGCTaGTTGGAGCGCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPRMLPR*LERSYS
Trigger: AGAATATGAGCGCTCCAAGCAGCGTGGCAACATTCT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 4 (lower is better)
Translates to: RLTTSGAWWNVYSISALATTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTCCTTCAGGGAGCCACTaGTGGTCAAGAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSPSGSH*WSRVSS
Trigger: AGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGG...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR GCA 90 bp CTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTAGAGTCCATAAGGGTTaGCACCTGCAATGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LTTSGAWWNVYSISALAPRVHKG*HLQCCR
Trigger: TCTACAGCATTGCAGGTGGCAACCCTTATGGACTCT...AGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CCACTGCCTTCAGCTGGAAGGTGTAGGTGCTTTGTTGCTCTCGATCAAAGCTCAACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 4 (lower is better)
Translates to: PLPSAGRCRCFVALDQSSTTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...TGAGCTTTGATCGAGAGCAACAAAGCACCTACACCTTCCAGCTGAAGGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp GCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGAATGTGTTTGCAGGTaGCAGGTCCTGTACCACCTG +
Preference number: 4 (lower is better)
Translates to: AWWNVYSISALAPWSESLECVCR*QVLYHL
Trigger: CAGGTGGTACAGGACCTGCCACCTGCAAACACATTC...CAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTGGGTGTGTTGTCATTaGTGTCTTGTACTTCTATCT +
Preference number: 4 (lower is better)
Translates to: PTPPLVTKALQGATGGQEWVCCH*CLVLLS
Trigger: AGATAGAAGTACAAGACATCAATGACAACACACCCA...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR TCA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATGGGTGTGTTGTCATTaGTGTCTTGTACTTCTATCT +
Preference number: 4 (lower is better)
Translates to: SPLSYPQDPRSPCFPPREWVCCH*CLVLLS
Trigger: AGATAGAAGTACAAGACATCAATGACAACACACCCA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR TCA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTCATGTTCTCCATCACTaGGAAGTTGTAGCCACTCAG +
Preference number: 4 (lower is better)
Translates to: LEESIRVATCNAVDQLSIHVLHH*EVVATQ
Trigger: CTGAGTGGCTACAACTTCTCAGTGATGGAGAACATG...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR TCA 90 bp CAATCTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGTGGCCAGAGTCTCATTaGCATAAAGATGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: QSGRVHKGCHLQCCRSAQWPESH*HKDGPR
Trigger: CCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCA...CTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp CATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACCATCTACAACTTCGGGCGCCTaGTGGAATGTGTATTCGATT +
Preference number: 4 (lower is better)
Translates to: HEGNNELEVRCPPLTPPSTTSGA*WNVYSI
Trigger: AATCGAATACACATTCCACCAGGCGCCCGAAGTTGT...AGATGGTGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CCA 90 bp AATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCACCCTGGATGGAAGGCAGTaGGGAGTTAGAGCGATAGTG +
Preference number: 4 (lower is better)
Translates to: NVYSISALAPWSESLAFTLDGRQ*GVRAIV
Trigger: CACTATCGCTCTAACTCCCCACTGCCTTCCATCCAG...GGTGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CCA 90 bp GCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGACTTCGGGCGCCTGGTaGAATGTGTATTCGATTTCT +
Preference number: 4 (lower is better)
Translates to: AWWNVYSISALAPWSESLTSGAW*NVYSIS
Trigger: AGAAATCGAATACACATTCCACCAGGCGCCCGAAGT...CAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CCA 90 bp ATAATACACATCATGTGTTTAGAACGGTGCCTGGCACCTAGGCTATTATTATTTTGCCCCGGATCTCAATaGTGGGGGCATTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: IIHIMCLERCLAPRLLLFCPGSQ*WGHCHS
Trigger: TGAATGACAATGCCCCCACCATTGAGATCCGGGGCA...AAATAATAATAGCCTAGGTGCCAGGCACCGTTCTAAACACATGATGTGTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp AGTGAGGCCCTGGAATGGGCCATTTGGGAGCTGGCCGGCGGCTGGGGGAGGGGGTTTCCCTTGGAGGCCTaGCCACTGGGCTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SEALEWAIWELAGGWGRGFPLEA*PLGLGA
Trigger: TGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAA...CCCCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GCTTGGCCGTCTGGGCAGATGCCGGTGTGGCTGCGGGTGGGAAGTCCGAGGTCTCGCACGGGGGCCGTTTaGGTGTTCCGGTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: AWPSGQMPVWLRVGSPRSRTGAV*VFRSSG
Trigger: CCCGGAAGACCGGAACACCAAAACGGCCCCCGTGCG...AGACCTCGGACTTCCCACCCGCAGCCACACCGGCATCTGCCCAGACGGCCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CAA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCACCCCCACCCACCCGTaGTTTCCCTGGCCTGCACCC +
Preference number: 5 (lower is better)
Translates to: PTWGPGQEVHAEGVESEATPTHP*FPWPAP
Trigger: GGGTGCAGGCCAGGGAAACAACGGGTGGGTGGGGGT...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS GCA 90 bp TGGGAGGCCCCAGAATCAGGAGGGATTATACAGTCACCGGGTCCCTaGCCCGCGAGGCCGCGCAGTGTCACGGCCTGTGTCACACGCCCT +
Preference number: 5 (lower is better)
Translates to: WEAPESGGIIQSPGP*PARPRSVTACVTRP
Trigger: AGGGCGTGTGACACAGGCCGTGACACTGCGCGGCCTCGCGGGGCAGGGACCCGGTGACTGTATAATCCCTCCTGATTCTGGGGCCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514773.1
CDS-3UTR CAA 90 bp CCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTTGGGCACGGGCACTCTaGGGGTTGGTGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PSRSQPPGHGHSWGWCLGWARAL*GLVPRS
Trigger: GGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCA...ACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCTGTTCCTCCGGCACCTaGTACACTACCCGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: PTWGPGQEVHAEGVESEACSSGT*YTTRVA
Trigger: CGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACA...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTTGAGGGCGCTGCTCTaGGTCCGGCGGCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: RSVIPPLGALARKSTLKGLRALL*VRRLGD
Trigger: ATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAA...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS CCA 90 bp CCTGGGCCTCAGGCCCAGCCTGCAGCTCATAGGATGCCACACCGTTaGGACCAGCATCACGGTCTGAAGCCAGCGGGATGGGGAAGAGTG +
Preference number: 5 (lower is better)
Translates to: PGPQAQPAAHRMPHR*DQHHGLKPAGWGRV
Trigger: CACTCTTCCCCATCCCGCTGGCTTCAGACCGTGATGCTGGTCCCAACGGTGTGGCATCCTATGAGCTGCAGGCTGGGCCTGAGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS-3UTR CAA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCCGCACGGGGGCCGTTTaGGTGTTCCGGTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: FSPASGLKLGMLSPPWSARTGAV*VFRSSG
Trigger: CCCGGAAGACCGGAACACCAAAACGGCCCCCGTGCG...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAACCTGGAATGGGCCATTaGGGAGCTGGCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ALQGATGGQEFPLGAPREPGMGH*GAGRRL
Trigger: CAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGG...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS GCA 90 bp TCCGGCCAGCCGGCTCATTCTCGGGGTGCTCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCTCATAGTGATCCTCAGGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: SGQPAHSRGAPSLLC*HQGWCAHSDPQAGP
Trigger: TGGCCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCCGGCTGGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS GCA 90 bp TGCTCCGGCCAGCCGGCTCATTCTCGGGGTGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGCGCTCATAGTGATCCTCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: CSGQPAHSRGAPSLL*CHQGWCAHSDPQAG
Trigger: CCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCCGGCTGGCCGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CAA 90 bp AGTGAGGCCCTGGAATGGGCCATTTGGGAGCTGGCCGGCGGCTGGGGGAGGGGGAAAATGTCACCTGTCTaGCCATCCACGCGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: SEALEWAIWELAGGWGRGKMSPV*PSTRRY
Trigger: GTACCTTCGCGTGGATGGCAAGACAGGTGACATTTT...CCCCCTCCCCCAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGGGCCTCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp ACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCACTCGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: TTWARALLGLVPRSLASTRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...AGTGCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCTGGGCACGGGCACTCTaGGGGTTGGTGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVWARAL*GLVPRS
Trigger: GGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCA...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGTGGGCACGGGCACTCTaGGGGTTGGTGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRWARAL*GLVPRS
Trigger: GGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCA...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: KGQRGHEVSDTPTWGPGQVRCPP*TPPSAQ
Trigger: TTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC...CTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp TCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGCGCTCACGGTCCAGGTaGCCCATCACAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SFTVTTTWARALLGLVPRRSRSR*PITMSC
Trigger: ACAGCTCATTGTGATGGGCAACCTGGACCGTGAGCG...CCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCAACAGGTGCGTTGTCATaGACGTCCACCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: RWASPGAARENKASAPLPTGALS*TSTTCT
Trigger: GGTGCAGGTGGTGGACGTCAATGACAACGCACCTGT...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GGTGGCAGGTCCTGTACCACCTGGTGCTTCTTGGAGGCTGAGGGTGACTGGGGCACAGGTGCGTTGTCATaGACGTCCACCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: GGRSCTTWCFLEAEGDWGTGALS*TSTTCT
Trigger: GGTGCAGGTGGTGGACGTCAATGACAACGCACCTGT...GCCCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTGGGGCATACAGGTCCTaGGTCTCCTTCTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAGAYRS*VSFLPA
Trigger: GGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCCC...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAAGCCTTGCCACTGGGCTaGGGGGCATACAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALQGATGGQEFPLGAPREALPLG*GAYRSL
Trigger: CAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGC...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCAGCCTTGCCACTGGGCTaGGGGGCATACAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPALPLG*GAYRSL
Trigger: CAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGC...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAGGCCCTGAGGATGACTaGCTGGACGGCGTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPGPEDD*LDGVSD
Trigger: GTCTGAGACGCCGTCCAGCAAGTCATCCTCAGGGCC...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS CCA 90 bp TGGAAAACCATAGTCGGCTGCGAGGCTCCCAATGAGGGTGTTGGGTaGCTGTTCCTCCGGCACCTTGTACACTACCCGAGTGGCGTGGCC +
Preference number: 5 (lower is better)
Translates to: WKTIVGCEAPNEGVG*LFLRHLVHYPSGVA
Trigger: GGCCACGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACAGCCACCCAACACCCTCATTGGGAGCCTCGCAGCCGACTATGGTTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS CCA 90 bp CGGTCCAGGTTGCCCATCACAATGAGCTGTGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGCCCAAATAGCTCCTGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: RSRLPITMSCGCFSS*SSATCSPNSSWASG
Trigger: GCCTGAGGCCCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTGATGGGCAACCTGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000505937.2
CDS-3UTR CAA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCATGTTCCTCCGGCACCTaGTACACTACCCGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPCSSGT*YTTRVA
Trigger: CGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACA...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGGCACCCACCTCTAGCTaGTACAGGTGCCCCACATCT +
Preference number: 5 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLAPTSS*YRCPTS
Trigger: AGATGTGGGGCACCTGTACAAGCTAGAGGTGGGTGC...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGGTGGGCCAGTCCAGGAGCAGCACGGGAAAACAAGGCCTCCGCTCCACTCCCACACAATGAGCTGTGGTaGCTTCTCCTCCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RWASPGAARENKASAPLPHNELW*LLLLVL
Trigger: GAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTG...TGGGAGTGGAGCGGAGGCCTTGTTTTCCCGTGCTGCTCCTGGACTGGCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGCACAATGAGCTGTGGTaGCTTCTCCTCCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: RSVIPPLGALARKSTLKGHNELW*LLLLVL
Trigger: GAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTG...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGAGGGCCGCTCAAACTaGGGGGCGTTGTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAEEGRSN*GALSLV
Trigger: CACCAATGACAACGCCCCCAAGTTTGAGCGGCCCTC...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCGAGGGCCGCTCAAACTaGGGGGCGTTGTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCEGRSN*GALSLV
Trigger: CACCAATGACAACGCCCCCAAGTTTGAGCGGCCCTC...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGCCTTGCCACTGGGCTaGGGGGCATACAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVALPLG*GAYRSL
Trigger: CAAGGACCTGTATGCCCCCAAGCCCAGTGGCAAGGC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCTTTCCCTTGGAGGCCTaGCCACTGGGCTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPFPLEA*PLGLGA
Trigger: TGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAA...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAATGCAGAGGAGCCCTCTaGGGCATCAGATGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAECRGAL*GIRWGK
Trigger: CTTCCCCCATCTGATGCCCAAGAGGGCTCCTCTGCA...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp GTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGCTTCAGGGCTAAAATaGGGCATGCTATCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: VRCPPLTPPSAQIEGVLPASGLK*GMLSPP
Trigger: GGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGC...AGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCCAGGGTCCAGGGACTaGGCAAATCACAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLPGSRD*ANHRSL
Trigger: GAGAGACCTGTGATTTGCCAAGTCCCTGGACCCTGG...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS TCA 90 bp TCTGGCATTCACGGAGCCCCTCACGGTCGATGGAGGTCTCGGTGGTaGAAATGTCACCTGTCTTGCCATCCACGCGAAGGTACGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SGIHGAPHGRWRSRW*KCHLSCHPREGTGH
Trigger: GTGCCCCGTACCTTCGCGTGGATGGCAAGACAGGTGACATTTTCACCACCGAGACCTCCATCGACCGTGAGGGGCTCCGTGAATGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 90 bp GCAAAGGGCGAAGGTCATTCTCGGGGTGCTCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCTCATAGTGATCCTCAGGCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: AKGEGHSRGAPSLLC*HQGWCAHSDPQAGP
Trigger: TGGCCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGACCTTCGCCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS GCA 90 bp CAGGCAAAGGGCGAAGGTCATTCTCGGGGTGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGCGCTCATAGTGATCCTCAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QAKGEGHSRGAPSLL*CHQGWCAHSDPQAG
Trigger: CCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGACCTTCGCCCTTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS CCA 90 bp GATACCTCAAACTCCAGGATGCAGGGATCACCAGGGAGCTGGTTCTaGCATTCACGGAGCCCCTCACGGTCGATGGAGGTCTCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: DTSNSRMQGSPGSWF*HSRSPSRSMEVSVV
Trigger: CACCACCGAGACCTCCATCGACCGTGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCCCTGCATCCTGGAGTTTGAGGTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS CCA 90 bp ATGCCACACCGTTGGGACCAGCATCACGGTCTGAAGCCAGCGGGATaGGGAAGAGTGAGCCGATGTTGGTGTTCTCAGGGATGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: MPHRWDQHHGLKPAG*GRVSRCWCSQGWPE
Trigger: CTCTGGCCATCCCTGAGAACACCAACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAGACCGTGATGCTGGTCCCAACGGTGTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS CCA 90 bp CAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGCGAAGGTCTGGCACTCTGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QSGQTHCTPGYMCLS*RHQAKGEGLALCLR
Trigger: CCTGAGGCAGAGTGCCAGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CAA 90 bp CCAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCTGTTCCTCCGGCACCTaGTACACTACCCGAGTGGCG +
Preference number: 5 (lower is better)
Translates to: PVQPCFRAKIGHAIPALVCSSGT*YTTRVA
Trigger: CGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACA...GACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCTCCCAATGAGGGTGTaGGGTGGCTGTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKLPMRV*GGCSSG
Trigger: GCCGGAGGAACAGCCACCCAACACCCTCATTGGGAG...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TGGGAGAAGGGCCAGCGTGGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTAAGAGTGAGCCGATGTaGGTGTTCTCAGGGATGGCC +
Preference number: 5 (lower is better)
Translates to: WEKGQRGHEVSDTPTWGPKSEPM*VFSGMA
Trigger: GGCCATCCCTGAGAACACCAACATCGGCTCACTCTT...AGGGCCCCAAGTGGGGGTATCACTGACCTCATGACCACGCTGGCCCTTCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAACGCTCACGGTCCAGGTaGCCCATCACAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: ALQGATGGQEFPLGAPRERSRSR*PITMSC
Trigger: ACAGCTCATTGTGATGGGCAACCTGGACCGTGAGCG...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCCGCTCACGGTCCAGGTaGCCCATCACAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PALVGHEGNNELEVRCPPRSRSR*PITMSC
Trigger: ACAGCTCATTGTGATGGGCAACCTGGACCGTGAGCG...GGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCACAGGTGCGTTGTCATaGACGTCCACCACCTGCACC +
Preference number: 5 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSTGALS*TSTTCT
Trigger: GGTGCAGGTGGTGGACGTCAATGACAACGCACCTGT...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGACTTCACCAGGCTTGTaGTTTTCCGGGAAGGCGACC +
Preference number: 5 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLTSPGL*FSGKAT
Trigger: GGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGT...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCTCCAGCAGCGTGCGGTaGGCCAGAGTCTCATTGACA +
Preference number: 5 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSSSSVR*ARVSLT
Trigger: TGTCAATGAGACTCTGGCCAACCGCACGCTGCTGGA...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGCTGGCTATGTTGCCACGCTGCTaGGAGCGCTCATATTCTGGA +
Preference number: 5 (lower is better)
Translates to: SLIRVPGEALRPHLPLLAMLPRC*ERSYSG
Trigger: TCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACAT...AGCCAGCAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp GGTGGCAGGTCCTGTACCACCTGGTGCTTCTTGGAGGCTGAGGGTGACTGGGGCATGTTGCCACGCTGCTaGGAGCGCTCATATTCTGGA +
Preference number: 5 (lower is better)
Translates to: GGRSCTTWCFLEAEGDWGMLPRC*ERSYSG
Trigger: TCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACAT...GCCCCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGTACAGGACCTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCACACCAAAGAGAATGTaGCCACGCTGCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCTPKRM*PRCLER
Trigger: GCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGT...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGGCTTCACGGGCTTaGGGGACTTGCTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPLASRA*GTCSSC
Trigger: GCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAG...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTACCACCTGGTGCTTCTaGGAGGCTGAGGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPTTWCF*EAEGDW
Trigger: CCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGT...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TGTCAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTGCCTGTCATGGCGAGGCCCTGAGGATGACTaGCTGGACGGCGTCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CQSGQTHCTPGYMCLSWRGPEDD*LDGVSD
Trigger: GTCTGAGACGCCGTCCAGCAAGTCATCCTCAGGGCC...TCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS CCA 90 bp CAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGCGAAGGTCATTCTCGGGGTGCTCCA +
Preference number: 5 (lower is better)
Translates to: QSGQTHCTPGYMCLS*RHQAKGEGHSRGAP
Trigger: TGGAGCACCCCGAGAATGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GGGGGCCGGCCGGCCAGTAGGGGGCTCACAGGTAGATCTCGCGCTTGGCCGTCTTTGGGTGTGTTGTCATaGATGTCTTGTACTTCTATC +
Preference number: 5 (lower is better)
Translates to: GGRPASRGLTGRSRAWPSLGVLS*MSCTSI
Trigger: GATAGAAGTACAAGACATCAATGACAACACACCCAA...AGACGGCCAAGCGCGAGATCTACCTGTGAGCCCCCTACTGGCCGGCCGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS-3UTR CAA 90 bp TGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGGAGGGCCGCTCAAACTaGGGGGCGTTGTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: WKSREGAQSLQRSPLGHQEGRSN*GALSLV
Trigger: CACCAATGACAACGCCCCCAAGTTTGAGCGGCCCTC...CTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATTCCACCACCTGCACCTaGAGGGAGTTAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHSTTCT*RELVLE
Trigger: CTCCAGCACTAACTCCCTCAAGGTGCAGGTGGTGGA...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp ACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTAGCAAGCATCACTTCACCAGGCTaGTTGTTTTCCGGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: TTTWARALLGLVPRSLASITSPG*LFSGKA
Trigger: CGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGAT...GCTTGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTGGAGAGTGAGGCCCCACTCAGCATAAATTaGGGGTCATTGTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: PTWGPGQEVHAEGVESEAPLSIN*GSLSLQ
Trigger: CTGCAATGACAATGACCCCAAATTTATGCTGAGTGG...GGCCTCACTCTCCACCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGGGGCATACAGGTCCTaGGTCTCCTTCTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: PWKSREGAQSLQRSPLGHGAYRS*VSFLPA
Trigger: GGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCCC...ATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCCGCTGTTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTGCTGGCTTCACGGGCTTaGGGGACTTGCTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: PAVPDPEMSSPGSLQSRVLASRA*GTCSSC
Trigger: GCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAG...CACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCTCATCAGGTTGAACTaGAGGGACTTCTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLLIRLN*RDFCSP
Trigger: CGGGCTGCAGAAGTCCCTCAAGTTCAACCTGATGAG...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGGCATCGCTCATCAGGTaGAACTTGAGGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLASLIR*NLRDFC
Trigger: GCAGAAGTCCCTCAAGTTCAACCTGATGAGCGATGC...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCATGCCCACGAATGTGTTaGCAGGTGGCAGGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPCPRMC*QVAGPV
Trigger: TACAGGACCTGCCACCTGCAAACACATTCGTGGGCA...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCAAAGGTGGCCGAGTCCTaGCAGGAATCATGGCTACTG +
Preference number: 5 (lower is better)
Translates to: HHLPKSRGCSLEVKGRSPKVAES*QESWLL
Trigger: CAGTAGCCATGATTCCTGCAAGGACTCGGCCACCTT...TGGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp TTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGCCAAGGTGGCCGAGTCCTaGCAGGAATCATGGCTACTG +
Preference number: 5 (lower is better)
Translates to: FSPASGLKLGMLSPPWSAKVAES*QESWLL
Trigger: CAGTAGCCATGATTCCTGCAAGGACTCGGCCACCTT...GGCCGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCCTGGAATGGGCCATTaGGGAGCTGGCCGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGPGMGH*GAGRRL
Trigger: CAGCCGCCGGCCAGCTCCCAAATGGCCCATTCCAGG...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCATGCAGAGGAGCCCTCTaGGGCATCAGATGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASCRGAL*GIRWGK
Trigger: CTTCCCCCATCTGATGCCCAAGAGGGCTCCTCTGCA...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAGTACGCTGCCCACCCTaGACTCCACCATCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSVRCPP*TPPSAQ
Trigger: TTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTAC...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp TCATGTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCTTGGCCTTCACCTGGTaGGGTGGGCTCCCATTTCTA +
Preference number: 5 (lower is better)
Translates to: SCPSRSQPPGHGHSWGWCLAFTW*GGLPFL
Trigger: TAGAAATGGGAGCCCACCCAACCAGGTGAAGGCCAA...GCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS CCA 90 bp GTGATAGATACCTCAAACTCCAGGATGCAGGGATCACCAGGGAGCTaGTTCTGGCATTCACGGAGCCCCTCACGGTCGATGGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: VIDTSNSRMQGSPGS*FWHSRSPSRSMEVS
Trigger: CGAGACCTCCATCGACCGTGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCCCTGCATCCTGGAGTTTGAGGTATCTATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS-3UTR CAA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCAAGAGTGAGCCGATGTaGGTGTTCTCAGGGATGGCC +
Preference number: 5 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVKSEPM*VFSGMA
Trigger: GGCCATCCCTGAGAACACCAACATCGGCTCACTCTT...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCGAGGGCCGCTCAAACTaGGGGGCGTTGTCATTGGTG +
Preference number: 5 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPEGRSN*GALSLV
Trigger: CACCAATGACAACGCCCCCAAGTTTGAGCGGCCCTC...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCTTGGTCTGAGTCATaGGCCTTCACCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRPWSES*AFTWMT
Trigger: GGTCATCCAGGTGAAGGCCAATGACTCAGACCAAGG...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCCGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GGTCATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTTCAATGGTGGGGGCATaGTCATTCATGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: GHEVSDTPTWGPGQEVHASMVGA*SFMSFT
Trigger: CGTGAAGGACATGAATGACAATGCCCCCACCATTGA...AGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCACTGTCAATGGTGGGGGCATaGTCATTCATGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: SLSLIRVPGEALRPHLPLSMVGA*SFMSFT
Trigger: CGTGAAGGACATGAATGACAATGCCCCCACCATTGA...CAGTGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp GCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGAGCTCCCAGGGAATTGCAGTCCAGCACATaGACAAGGACAGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ALQGATGGQEFPLGAPRELQSST*TRTVAV
Trigger: CACAGCCACTGTCCTTGTCAATGTGCTGGACTGCAA...TTCCCTGGGAGCTCCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GAAGTACGCTGCCCACCCTTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCTGGGCATTCTCCCCCTaGTCTCCATCAATGACAGTC +
Preference number: 5 (lower is better)
Translates to: EVRCPPLTPPSAQIEGVLWAFSP*SPSMTV
Trigger: GACTGTCATTGATGGAGACAAGGGGGAGAATGCCCA...GAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAAGGGTGGGCAGCGTACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCTTCACTCAGCCTAATCCGTGTGCCCGGTGAGGCACTAAGGCCCCACCTCCCATGGGCATTCTCCCCCTaGTCTCCATCAATGACAGTC +
Preference number: 5 (lower is better)
Translates to: SSLSLIRVPGEALRPHLPWAFSP*SPSMTV
Trigger: GACTGTCATTGATGGAGACAAGGGGGAGAATGCCCA...TGGGAGGTGGGGCCTTAGTGCCTCACCGGGCACACGGATTAGGCTGAGTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394536.4
ENST00000515351.1
CDS-3UTR CAA 90 bp TCCCCGGTGCCCACGAATGTGTTTGCAGGTGGCAGGTCCTGTACCACCTGGTGCGGTGTAGGTGCTTTGTaGCTCTCGATCAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: SPVPTNVFAGGRSCTTWCGVGAL*LSIKAQ
Trigger: CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACC...GCACCAGGTGGTACAGGACCTGCCACCTGCAAACACATTCGTGGGCACCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCATCCAGCAGCGTGCGGTaGGCCAGAGTCTCATTGACA +
Preference number: 5 (lower is better)
Translates to: LEVKGRSPVIAEEPSWASSSSVR*ARVSLT
Trigger: TGTCAATGAGACTCTGGCCAACCGCACGCTGCTGGA...TGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATGTTGCCACGCTGCTaGGAGCGCTCATATTCTGGA +
Preference number: 5 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGMLPRC*ERSYSG
Trigger: TCCAGAATATGAGCGCTCCAAGCAGCGTGGCAACAT...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCTCATCAGGTTGAACTaGAGGGACTTCTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRLIRLN*RDFCSP
Trigger: CGGGCTGCAGAAGTCCCTCAAGTTCAACCTGATGAG...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCAGGGCATCGCTCATCAGGTaGAACTTGAGGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: LRSPAYHPQPIRPSSWSRASLIR*NLRDFC
Trigger: GCAGAAGTCCCTCAAGTTCAACCTGATGAGCGATGC...CCTGGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCTGCCCACGAATGTGTTaGCAGGTGGCAGGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPCPRMC*QVAGPV
Trigger: TACAGGACCTGCCACCTGCAAACACATTCGTGGGCA...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCTCTGGGTTGAGGGCGCTGCTCTaGGTCCGGCGGCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: FGNKSPSGSHWWSRVSSGLRALL*VRRLGD
Trigger: ATCTCCCAGCCGCCGGACCAAGAGCAGCGCCCTCAA...CCCAGAGGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CATGAGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGTCCCTACCCCACCTTaGGTAACAAAAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: HEVSDTPTWGPGQEVHAEVPTPP*VTKALQ
Trigger: CTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGAC...TTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS GCA 90 bp AGCATGTGTCAGAGTGGCCAAACTCACTGCACTCCCGGGTACATGTaGCTGTCATGGCGACATCAGGCAAAGGGCGAAGGTCATTCTCGG +
Preference number: 5 (lower is better)
Translates to: SMCQSGQTHCTPGYM*LSWRHQAKGEGHSR
Trigger: CCGAGAATGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTGGCCACTCTGACACATGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCTCCCAATGAGGGTGTaGGGTGGCTGTTCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGLPMRV*GGCSSG
Trigger: GCCGGAGGAACAGCCACCCAACACCCTCATTGGGAG...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CCTGGCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCAAAATGTCACCTGTCTaGCCATCCACGCGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: PGRLPTQLSTGPQVSLFPKMSPV*PSTRRY
Trigger: GTACCTTCGCGTGGATGGCAAGACAGGTGACATTTT...GGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGGTTGTCATTGATGTCTaGTACTTCTATCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RSVIPPLGALARKSTLKGVVIDV*YFYLAL
Trigger: GAGGGCCAGATAGAAGTACAAGACATCAATGACAAC...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACGCTCACGGTCCAGGTaGCCCATCACAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQRSRSR*PITMSC
Trigger: ACAGCTCATTGTGATGGGCAACCTGGACCGTGAGCG...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp GTCCTTCACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGAGGAAATACTTCTTCTaGCTGTCACTGCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: VLHGHNHLGTGTLGVGASRKYFF*LSLPVS
Trigger: TGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCCT...CGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGTGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp AGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAATCCACCACCTGCACCTaGAGGGAGTTAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RLLTHFPPHLRSPAYHPQSTTCT*RELVLE
Trigger: CTCCAGCACTAACTCCCTCAAGGTGCAGGTGGTGGA...TTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGACTTCACCAGGCTTGTaGTTTTCCGGGAAGGCGACC +
Preference number: 5 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKTSPGL*FSGKAT
Trigger: GGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGT...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGACTTCACCAGGCTTGTaGTTTTCCGGGAAGGCGACC +
Preference number: 5 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKTSPGL*FSGKAT
Trigger: GGTCGCCTTCCCGGAAAACAACAAGCCTGGTGAAGT...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTTTGCAGTCCAGCACATaGACAAGGACAGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPLQSST*TRTVAV
Trigger: CACAGCCACTGTCCTTGTCAATGTGCTGGACTGCAA...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGACACCAAAGAGAATGTaGCCACGCTGCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKTPKRM*PRCLER
Trigger: GCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGT...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCGGGGCATACAGGTCCTaGGTCTCCTTCTTACCAGCC +
Preference number: 5 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPGAYRS*VSFLPA
Trigger: GGCTGGTAAGAAGGAGACCAAGGACCTGTATGCCCC...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCACCACCTGGTGCTTCTaGGAGGCTGAGGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSTTWCF*EAEGDW
Trigger: CCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGT...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCAACCACCTGGTGCTTCTaGGAGGCTGAGGGTGACTGG +
Preference number: 5 (lower is better)
Translates to: RLTTSGAWWNVYSISALATTWCF*EAEGDW
Trigger: CCAGTCACCCTCAGCCTCCAAGAAGCACCAGGTGGT...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGACGAAGGTGGAGAGTTaGAGGGCGCTGCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: PTPPLVTKALQGATGGQETKVES*RALLLV
Trigger: GACCAAGAGCAGCGCCCTCAAACTCTCCACCTTCGT...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAACCTTGGTCTGAGTCATaGGCCTTCACCTGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SVPVQSKKTPHNFGRLVEPWSES*AFTWLG
Trigger: ACCCAACCAGGTGAAGGCCAATGACTCAGACCAAGG...TTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp AAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGCCCAGATGGGCACCCACCTCTAGCTaGTACAGGTGCCCCACATCT +
Preference number: 5 (lower is better)
Translates to: KVLIYRHCMTSREWGPRWAPTSS*YRCPTS
Trigger: AGATGTGGGGCACCTGTACAAGCTAGAGGTGGGTGC...CCATCTGGGCCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp AGTAGACTTCTTACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCACAATGAGCTGTGGTaGCTTCTCCTCCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: SRLLTHFPPHLRSPAYHPHNELW*LLLLVL
Trigger: GAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTG...GGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGTAAGAAGTCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGCCTTGGTCTGAGTCATaGGCCTTCACCTGGATGACC +
Preference number: 5 (lower is better)
Translates to: PTPPLVTKALQGATGGQEPWSES*AFTWMT
Trigger: GGTCATCCAGGTGAAGGCCAATGACTCAGACCAAGG...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp AATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCACCTGGGCACGGGCACTCTaGGGGTTGGTGCCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: NVYSISALAPWSESLAFTWARAL*GLVPRS
Trigger: GGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCA...GGTGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp ACGGTCACAACCACCTGGGCACGGGCACTCTTGGGGTTGGTGCCTCGGTCCTTACCACTCAGCATAAATTaGGGGTCATTGTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: TVTTTWARALLGLVPRSLPLSIN*GSLSLQ
Trigger: CTGCAATGACAATGACCCCAAATTTATGCTGAGTGG...TAAGGACCGAGGCACCAACCCCAAGAGTGCCCGTGCCCAGGTGGTTGTGACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGATAACAAAGTCACCGTaGTCCTGCTCCACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRITKSP*SCSTES
Trigger: GCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTAT...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCACCTAGGTCTGGTCGGTGTAGGTGCTTTGTaGCTCTCGATCAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HRTPGLPVSLLEKHLGLVGVGAL*LSIKAQ
Trigger: CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACC...GACCAGACCTAGGTGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTTTTCCCTTGGAGGCCTaGCCACTGGGCTTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: LEESIRVATCNAVDQLSIFPLEA*PLGLGA
Trigger: TGCCCCCAAGCCCAGTGGCAAGGCCTCCAAGGGAAA...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CAGTTCAGCCCTGCTTCAGGGCTAAAATTGGGCATGCTATCCCCGCCCTGGTCGGGGGACTTGCTCTTCTaGCCTTTGCTTTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: QFSPASGLKLGMLSPPWSGDLLF*PLLLFP
Trigger: GGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCC...CGACCAGGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGCAGGGCTGAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCCGCTGTTCCCGATCCAGAGATGTCTTCACCTGGATCTCTCCAGTCTCGGGTGGGGGACTTGCTCTTCTaGCCTTTGCTTTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: PAVPDPEMSSPGSLQSRVGDLLF*PLLLFP
Trigger: GGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCC...CACCCGAGACTGGAGAGATCCAGGTGAAGACATCTCTGGATCGGGAACAGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCACTGGCTTCACGGGCTTaGGGGACTTGCTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPLASRA*GTCSSC
Trigger: GCAAGAAGAGCAAGTCCCCAAAGCCCGTGAAGCCAG...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAGCATCGCTCATCAGGTaGAACTTGAGGGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSASLIR*NLRDFC
Trigger: GCAGAAGTCCCTCAAGTTCAACCTGATGAGCGATGC...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCACGAAGGTGGAGAGTTaGAGGGCGCTGCTCTTGGTC +
Preference number: 5 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSTKVES*RALLLV
Trigger: GACCAAGAGCAGCGCCCTCAAACTCTCCACCTTCGT...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp ATTGGGCATGCTATCCCCGCCCTGGTCGGCCATGAGGGAAACAATGAGTTAGAAGCTTCAGGGCTAAAATaGGGCATGCTATCCCCGCCC +
Preference number: 5 (lower is better)
Translates to: IGHAIPALVGHEGNNELEASGLK*GMLSPP
Trigger: GGGCGGGGATAGCATGCCCAATTTTAGCCCTGAAGC...TTCTAACTCATTGTTTCCCTCATGGCCGACCAGGGCGGGGATAGCATGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS GCA 90 bp TCTTGTACTTCTATCTGGCCCTCTAGCAGCCGGGGGCTGCCATTCTaGACGAGGTCTGTGATAGATACCTCAAACTCCAGGATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: SCTSIWPSSSRGLPF*TRSVIDTSNSRMQG
Trigger: TCCCTGCATCCTGGAGTTTGAGGTATCTATCACAGACCTCGTGCAGAATGGCAGCCCCCGGCTGCTAGAGGGCCAGATAGAAGTACAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS-3UTR CAA 90 bp TTGACTCCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGAAAATGTCACCTGTCTaGCCATCCACGCGAAGGTAC +
Preference number: 5 (lower is better)
Translates to: LTPPSAQIEGVLPGSQGKKMSPV*PSTRRY
Trigger: GTACCTTCGCGTGGATGGCAAGACAGGTGACATTTT...CTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGGAGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGCCCAGTAGCTGGTCCGTTGTCATTGATGTCTaGTACTTCTATCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: HLRSPAYHPQPIRPSSWSVVIDV*YFYLAL
Trigger: GAGGGCCAGATAGAAGTACAAGACATCAATGACAAC...GGACCAGCTACTGGGCCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp AGGTCAGTGATACCCCCACTTGGGGCCCTGGCCAGGAAGTCCACGCTGAAGGGGTTGGGTGTGTTGTCATaGATGTCTTGTACTTCTATC +
Preference number: 5 (lower is better)
Translates to: RSVIPPLGALARKSTLKGLGVLS*MSCTSI
Trigger: GATAGAAGTACAAGACATCAATGACAACACACCCAA...CCCCTTCAGCGTGGACTTCCTGGCCAGGGCCCCAAGTGGGGGTATCACTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp ACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCCACAATGAGCTGTGGTaGCTTCTCCTCCTGGTCCTC +
Preference number: 5 (lower is better)
Translates to: TPHNFGRLVECVFDFCIGHNELW*LLLLVL
Trigger: GAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTG...GCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp CTCCCTGGAAGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCTATTCGATTTCTGCATaGGCACCTTGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: LPGSQGKEPSHCRGALLGYSISA*APWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATA...GCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACTTCCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CGGTCCTTAGCAAGCACTGAGAAGCGCAGGGTGCTTAGGTCCTCACGGTCCACCTATTCGATTTCTGCATaGGCACCTTGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: RSLASTEKRRVLRSSRSTYSISA*APWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATA...GGTGGACCGTGAGGACCTAAGCACCCTGCGCTTCTCAGTGCTTGCTAAGGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCAATCACTTCACCAGGCTaGTTGTTTTCCGGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAITSPG*LFSGKA
Trigger: CGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGAT...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCACCATCTGCCCAAATCGAGGGGGTGCTCCCTGGAAGTCAAGGGAAGGAGCCCATAAATTTGGGGTCATaGTCATTGCAGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: PPSAQIEGVLPGSQGKEPINLGS*SLQSST
Trigger: TGTGCTGGACTGCAATGACAATGACCCCAAATTTAT...GGGCTCCTTCCCTTGACTTCCAGGGAGCACCCCCTCGATTTGGGCAGATGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp AGTCAAGGGAAGGAGCCCAGTCATTGCAGAGGAGCCCTCTTGGGCATCAGATGGATAACAAAGTCACCGTaGTCCTGCTCCACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SQGKEPSHCRGALLGIRWITKSP*SCSTES
Trigger: GCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTAT...CCATCTGATGCCCAAGAGGGCTCCTCTGCAATGACTGGGCTCCTTCCCTTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GCAGACTCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTGAAGGTGTAGGTGCTTaGTTGCTCTCGATCAAAGCT +
Preference number: 5 (lower is better)
Translates to: ADSPLSYPQDPRSPCFPPEGVGA*LLSIKA
Trigger: AGCTTTGATCGAGAGCAACAAAGCACCTACACCTTC...AGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCCAGCAGCGTGCGGTaGGCCAGAGTCTCATTGACA +
Preference number: 5 (lower is better)
Translates to: TTSGAWWNVYSISALAPWSSSVR*ARVSLT
Trigger: TGTCAATGAGACTCTGGCCAACCGCACGCTGCTGGA...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGCACCCACCTCTAGCTaGTACAGGTGCCCCACATCT +
Preference number: 5 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMAPTSS*YRCPTS
Trigger: AGATGTGGGGCACCTGTACAAGCTAGAGGTGGGTGC...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGAAGAGTGAGCCGATGTaGGTGTTCTCAGGGATGGCC +
Preference number: 5 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGKSEPM*VFSGMA
Trigger: GGCCATCCCTGAGAACACCAACATCGGCTCACTCTT...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp GCACAATACACACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCAGGAAATACTTCTTCTaGCTGTCACTGCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: AQYTQKAQWEGALPWQTPRKYFF*LSLPVS
Trigger: TGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCCT...GGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGTGTGTATTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTTCCATCACTTCACCAGGCTaGTTGTTTTCCGGGAAGGCG +
Preference number: 5 (lower is better)
Translates to: PTFGNKSPSGSHWWSRVSITSPG*LFSGKA
Trigger: CGCCTTCCCGGAAAACAACAAGCCTGGTGAAGTGAT...GGAAACTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCATTGCAGTCCAGCACATaGACAAGGACAGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RLTTSGAWWNVYSISALALQSST*TRTVAV
Trigger: CACAGCCACTGTCCTTGTCAATGTGCTGGACTGCAA...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGGGACACCAAAGAGAATGTaGCCACGCTGCTTGGAGCGC +
Preference number: 5 (lower is better)
Translates to: RHSKVLIYRHCMTSREWGTPKRM*PRCLER
Trigger: GCGCTCCAAGCAGCGTGGCAACATTCTCTTTGGTGT...CCCCCATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp CCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGCAGGGGACTTGCTCTTCTaGCCTTTGCTTTTGTTTCCC +
Preference number: 5 (lower is better)
Translates to: PLSYPQDPRSPCFPPREAGDLLF*PLLLFP
Trigger: GGGAAACAAAAGCAAAGGCAAGAAGAGCAAGTCCCC...TGCTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAGTCCCTACCCCACCTTaGGTAACAAAAGCCCTTCAG +
Preference number: 5 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPVPTPP*VTKALQ
Trigger: CTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGAC...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CGTCCCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAGTTGTCATTGATGTCTaGTACTTCTATCTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RPYPTFGNKSPSGSHWWSVVIDV*YFYLAL
Trigger: GAGGGCCAGATAGAAGTACAAGACATCAATGACAAC...TGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGGGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS-3UTR CAA 90 bp CCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAAGTATTCGATTTCTGCATaGGCACCTTGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: PHSVIHRTPGLPVSLLEKYSISA*APWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATA...CTTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp CGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCATCAATGGTGGGGGCATaGTCATTCATGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: RLTTSGAWWNVYSISALASMVGA*SFMSFT
Trigger: CGTGAAGGACATGAATGACAATGCCCCCACCATTGA...TGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp GCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGTCCACCACCTGCACCTaGAGGGAGTTAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AWWNVYSISALAPWSESLSTTCT*RELVLE
Trigger: CTCCAGCACTAACTCCCTCAAGGTGCAGGTGGTGGA...CAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CCTACCCCACCTTTGGTAACAAAAGCCCTTCAGGGAGCCACTGGTGGTCAAGAGTTGGGGTCATTGTCATaGCAGTCCAGCACATTGACA +
Preference number: 5 (lower is better)
Translates to: PTPPLVTKALQGATGGQELGSLS*QSSTLT
Trigger: TGTCAATGTGCTGGACTGCAATGACAATGACCCCAA...CTCTTGACCACCAGTGGCTCCCTGAAGGGCTTTTGTTACCAAAGGTGGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATTGGGGTCATTGTCATaGCAGTCCAGCACATTGACA +
Preference number: 5 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRELGSLS*QSSTLT
Trigger: TGTCAATGTGCTGGACTGCAATGACAATGACCCCAA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCCCACTTACGCTCACCTGCCTACCACCCCCAACCCATAAGGATAAATTTGGGGTCATaGTCATTGCAGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: THFPPHLRSPAYHPQPIRINLGS*SLQSST
Trigger: TGTGCTGGACTGCAATGACAATGACCCCAAATTTAT...CCTTATGGGTTGGGGGTGGTAGGCAGGTGAGCGTAAGTGGGGAGGGAAATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ACAGAAGGCACAATGGGAAGGTGCCCTCCCCTGGCAGACTCCCCACTCAGTTATCCACTCAGCATAAATTaGGGGTCATTGTCATTGCAG +
Preference number: 5 (lower is better)
Translates to: TEGTMGRCPPLADSPLSYPLSIN*GSLSLQ
Trigger: CTGCAATGACAATGACCCCAAATTTATGCTGAGTGG...ATAACTGAGTGGGGAGTCTGCCAGGGGAGGGCACCTTCCCATTGTGCCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTGGGCATTCTCCCCCTaGTCTCCATCAATGACAGTC +
Preference number: 5 (lower is better)
Translates to: TTSGAWWNVYSISALAPWWAFSP*SPSMTV
Trigger: GACTGTCATTGATGGAGACAAGGGGGAGAATGCCCA...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp ATGACAGTCACCATGCCCACTGGACTCAGTGCTGGCATGTTCTCCATCACTGAGATAACAAAGTCACCGTaGTCCTGCTCCACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: MTVTMPTGLSAGMFSITEITKSP*SCSTES
Trigger: GCTCTCAGTGGAGCAGGACAACGGTGACTTTGTTAT...CTCAGTGATGGAGAACATGCCAGCACTGAGTCCAGTGGGCATGGTGACTGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTGGAATGTGTATTCGAAGGTGTAGGTGCTTaGTTGCTCTCGATCAAAGCT +
Preference number: 5 (lower is better)
Translates to: VQSKKTPHNFGRLVECVFEGVGA*LLSIKA
Trigger: AGCTTTGATCGAGAGCAACAAAGCACCTACACCTTC...GAATACACATTCCACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTCTCATCAGGTTGAACTaGAGGGACTTCTGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: LEESIRVATCNAVDQLSILIRLN*RDFCSP
Trigger: CGGGCTGCAGAAGTCCCTCAAGTTCAACCTGATGAG...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp CTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGCATTTGCCCACGAATGTGTTaGCAGGTGGCAGGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: LEESIRVATCNAVDQLSICPRMC*QVAGPV
Trigger: TACAGGACCTGCCACCTGCAAACACATTCGTGGGCA...AATGCTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GTCCAGTGTTCCTGTCCAGTCGAAGAAGACGCCTCACAACTTCGGGCGCCTGGTCTAGGCTATTATTATTaGCTATCCCCGACTGTCTGT +
Preference number: 5 (lower is better)
Translates to: VQCSCPVEEDASQLRAPGLGYYY*LSPTVC
Trigger: ACAGACAGTCGGGGATAGCAAATAATAATAGCCTAG...ACCAGGCGCCCGAAGTTGTGAGGCGTCTTCTTCGACTGGACAGGAACACTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp ACAACTTCGGGCGCCTGGTGGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCAATGGTGGGGGCATaGTCATTCATGTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: TTSGAWWNVYSISALAPWSMVGA*SFMSFT
Trigger: CGTGAAGGACATGAATGACAATGCCCCCACCATTGA...CCAAGGTGCCAATGCAGAAATCGAATACACATTCCACCAGGCGCCCGAAGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS-3UTR CAA 90 bp GCGGTTGGCCAGAGTCTCATTGACATAAAGATGGACCAAGGCTGTGCCATAGCGTTGGGGTCATTGTCATaGCAGTCCAGCACATTGACA +
Preference number: 5 (lower is better)
Translates to: AVGQSLIDIKMDQGCAIALGSLS*QSSTLT
Trigger: TGTCAATGTGCTGGACTGCAATGACAATGACCCCAA...CGCTATGGCACAGCCTTGGTCCATCTTTATGTCAATGAGACTCTGGCCAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAGAAGGTGTAGGTGCTTaGTTGCTCTCGATCAAAGCT +
Preference number: 5 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPEGVGA*LLSIKA
Trigger: AGCTTTGATCGAGAGCAACAAAGCACCTACACCTTC...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GTCGGCCATGAGGGAAACAATGAGTTAGAAGTACGCTGCCCACCCTTGACTCCAAGGAAATACTTCTTCTaGCTGTCACTGCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: VGHEGNNELEVRCPPLTPRKYFF*LSLPVS
Trigger: TGAGACAGGCAGTGACAGCAAGAAGAAGTATTTCCT...TGGAGTCAAGGGTGGGCAGCGTACTTCTAACTCATTGTTTCCCTCATGGCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp GGGACGTCATTCCAAGGTCCTTATATACAGACACTGCATGACCAGCAGGGAATGGGTGTAGGTGCTTTGTaGCTCTCGATCAAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: GTSFQGPYIQTLHDQQGMGVGAL*LSIKAQ
Trigger: CTGAGCTTTGATCGAGAGCAACAAAGCACCTACACC...CATTCCCTGCTGGTCATGCAGTGTCTGTATATAAGGACCTTGGAATGACGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS-3UTR CAA 90 bp TCCCCACTCAGTTATCCACAGGACCCCAGGTCTCCCTGTTTCCCTCCTAGAGAATTGGGTGTGTTGTCATaGATGTCTTGTACTTCTATC +
Preference number: 5 (lower is better)
Translates to: SPLSYPQDPRSPCFPPRELGVLS*MSCTSI
Trigger: GATAGAAGTACAAGACATCAATGACAACACACCCAA...TTCTCTAGGAGGGAAACAGGGAGACCTGGGGTCCTGTGGATAACTGAGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394536.4
CDS-3UTR CAA 90 bp ATAATACACATCATGTGTTTAGAACGGTGCCTGGCACCTAGGCTATTATTATTTCGGGCACTCTTGGGGTaGGTGCCTCGGTCCTTAGCA +
Preference number: 5 (lower is better)
Translates to: IIHIMCLERCLAPRLLLFRALLG*VPRSLA
Trigger: TGCTAAGGACCGAGGCACCAACCCCAAGAGTGCCCG...AAATAATAATAGCCTAGGTGCCAGGCACCGTTCTAAACACATGATGTGTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505937.2
CDS-3UTR CAA 90 bp CAATCTGGAAGAGTCCATAAGGGTTGCCACCTGCAATGCTGTAGATCAGCTCAGATAAATTTGGGGTCATaGTCATTGCAGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: QSGRVHKGCHLQCCRSAQINLGS*SLQSST
Trigger: TGTGCTGGACTGCAATGACAATGACCCCAAATTTAT...CTGAGCTGATCTACAGCATTGCAGGTGGCAACCCTTATGGACTCTTCCAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515351.1
CDS-3UTR CAA 90 bp GGAATGTGTATTCGATTTCTGCATTGGCACCTTGGTCTGAGTCATTGGCCTTCATATTCGATTTCTGCATaGGCACCTTGGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: GMCIRFLHWHLGLSHWPSYSISA*APWSES
Trigger: TGACTCAGACCAAGGTGCCAATGCAGAAATCGAATA...TGAAGGCCAATGACTCAGACCAAGGTGCCAATGCAGAAATCGAATACACATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505937.2
ENST00000515351.1
CDS GCA 72 bp GCAAAGGGCGAAGGTCTGGCACTCTGCCTCAGGGCCTaGTCCGGCCAGCCGGCTCATTCTCGGGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: AKGEGLALCLRA*SGQPAHSRGAP
Trigger: TGGAGCACCCCGAGAATGAGCCGGCTGGCCGGAGCAGGCCCTGAGGCAGAGTGCCAGACCTTCGCCCTTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS CAA 72 bp AGGGCCAGGGGACCGAGTCGAGGCCCTGAGGATGACTaGCTGGACGGCGTCTCAGACTCCTCCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: RARGPSRGPEDD*LDGVSDSSRPL
Trigger: CAGTGGCCTGGAGGAGTCTGAGACGCCGTCCAGCAAGTCATCCTCAGGGCCTCGACTCGGTCCCCTGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS CAA 90 bp GCGAGGCTCCCAATGAGGGTGTTGGGTGGCTGTTCCTCCGGCACCTaGTACACTACCCGAGTGGCGTGGCCTGGGGATGGAGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: ARLPMRVLGGCSSGT*YTTRVAWPGDGASR
Trigger: CCTGCTGGCTCCATCCCCAGGCCACGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACAGCCACCCAACACCCTCATTGGGAGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 72 bp CCAGAATCAGGAGGGATTATACAGTCACCGGGTCCCTaGCCCGCGAGGCCGCGCAGTGTCACGGCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: PESGGIIQSPGP*PARPRSVTACV
Trigger: GACACAGGCCGTGACACTGCGCGGCCTCGCGGGGCAGGGACCCGGTGACTGTATAATCCCTCCTGATTCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514773.1
CDS CCA 72 bp CAGGCCCAGCCTGCAGCTCATAGGATGCCACACCGTTaGGACCAGCATCACGGTCTGAAGCCAGCGGGATGG +
Preference number: 6 (lower is better)
Translates to: QAQPAAHRMPHR*DQHHGLKPAGW
Trigger: CCATCCCGCTGGCTTCAGACCGTGATGCTGGTCCCAACGGTGTGGCATCCTATGAGCTGCAGGCTGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS CCA 72 bp CGGGGTGCTCCATCTCTCCTATGCTGCCATCAGGGGTaGTGCGCTCATAGTGATCCTCAGGCAGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RGAPSLLCCHQG*CAHSDPQAGPG
Trigger: CCCTGGCCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS GCA 72 bp GGTGCTCCATCTCTCCTATGCTGCCATCAGGGGTGGTaGGCTCATAGTGATCCTCAGGCAGGGCCAGGGGAC +
Preference number: 6 (lower is better)
Translates to: GAPSLLCCHQGW*AHSDPQAGPGD
Trigger: GTCCCCTGGCCCTGCCTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287008.8
ENST00000503492.5
CDS CAA 72 bp CCAATGAGGGTGTTGGGTGGCTGTTCCTCCGGCACCTaGTACACTACCCGAGTGGCGTGGCCTGGGGATGGA +
Preference number: 6 (lower is better)
Translates to: PMRVLGGCSSGT*YTTRVAWPGDG
Trigger: TCCATCCCCAGGCCACGCCACTCGGGTAGTGTACAAGGTGCCGGAGGAACAGCCACCCAACACCCTCATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS CCA 72 bp AACTCCAGGATGCAGGGATCACCAGGGAGCTGGTTCTaGCATTCACGGAGCCCCTCACGGTCGATGGAGGTC +
Preference number: 6 (lower is better)
Translates to: NSRMQGSPGSWF*HSRSPSRSMEV
Trigger: GACCTCCATCGACCGTGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCCCTGCATCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 72 bp CCGGCTCATTCTCGGGGTGCTCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCTCATAGTGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: PAHSRGAPSLLC*HQGWCAHSDPQ
Trigger: CTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS GCA 72 bp CAGCCGGCTCATTCTCGGGGTGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGCGCTCATAGTGATCCT +
Preference number: 6 (lower is better)
Translates to: QPAHSRGAPSLL*CHQGWCAHSDP
Trigger: AGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGAGCCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503492.5
CDS CCA 72 bp ACCTCAAACTCCAGGATGCAGGGATCACCAGGGAGCTaGTTCTGGCATTCACGGAGCCCCTCACGGTCGATG +
Preference number: 6 (lower is better)
Translates to: TSNSRMQGSPGS*FWHSRSPSRSM
Trigger: CATCGACCGTGAGGGGCTCCGTGAATGCCAGAACCAGCTCCCTGGTGATCCCTGCATCCTGGAGTTTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS CCA 72 bp CGTTGGGACCAGCATCACGGTCTGAAGCCAGCGGGATaGGGAAGAGTGAGCCGATGTTGGTGTTCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: RWDQHHGLKPAG*GRVSRCWCSQG
Trigger: TCCCTGAGAACACCAACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAGACCGTGATGCTGGTCCCAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS CAA 90 bp CCCTCACGGTCGATGGAGGTCTCGGTGGTGAAAATGTCACCTGTCTaGCCATCCACGCGAAGGTACGGGGCACCCACCTCTAGCTTGTAC +
Preference number: 6 (lower is better)
Translates to: PSRSMEVSVVKMSPV*PSTRRYGAPTSSLY
Trigger: GTACAAGCTAGAGGTGGGTGCCCCGTACCTTCGCGTGGATGGCAAGACAGGTGACATTTTCACCACCGAGACCTCCATCGACCGTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS CAA 90 bp GCATCACGGTCTGAAGCCAGCGGGATGGGGAAGAGTGAGCCGATGTaGGTGTTCTCAGGGATGGCCAGAGTGATGACTGGTGAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: ASRSEASGMGKSEPM*VFSGMARVMTGEAK
Trigger: CTTCGCCTCACCAGTCATCACTCTGGCCATCCCTGAGAACACCAACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAGACCGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS TCA 72 bp CATCTGGAAAACCATAGTCGGCTGCGAGGCTCCCAATaGGGGTGTTGGGTGGCTGTTCCTCCGGCACCTTGT +
Preference number: 6 (lower is better)
Translates to: HLENHSRLRGSQ*GCWVAVPPAPC
Trigger: ACAAGGTGCCGGAGGAACAGCCACCCAACACCCTCATTGGGAGCCTCGCAGCCGACTATGGTTTTCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 72 bp GGCGAAGGTCATTCTCGGGGTGCTCCATCTCTCCTATaGTGCCATCAGGGGTGGTGCGCTCATAGTGATCCT +
Preference number: 6 (lower is better)
Translates to: GEGHSRGAPSLL*CHQGWCAHSDP
Trigger: AGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGACCTTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS CAA 72 bp TCGATGGAGGTCTCGGTGGTGAAAATGTCACCTGTCTaGCCATCCACGCGAAGGTACGGGGCACCCACCTCT +
Preference number: 6 (lower is better)
Translates to: SMEVSVVKMSPV*PSTRRYGAPTS
Trigger: AGAGGTGGGTGCCCCGTACCTTCGCGTGGATGGCAAGACAGGTGACATTTTCACCACCGAGACCTCCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 72 bp TCTATCTGGCCCTCTAGCAGCCGGGGGCTGCCATTCTaGACGAGGTCTGTGATAGATACCTCAAACTCCAGG +
Preference number: 6 (lower is better)
Translates to: SIWPSSSRGLPF*TRSVIDTSNSR
Trigger: CCTGGAGTTTGAGGTATCTATCACAGACCTCGTGCAGAATGGCAGCCCCCGGCTGCTAGAGGGCCAGATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000514773.1
CDS GCA 72 bp GAAGGTCATTCTCGGGGTGCTCCATCTCTCCTATGCTaGCATCAGGGGTGGTGCGCTCATAGTGATCCTCAG +
Preference number: 6 (lower is better)
Translates to: EGHSRGAPSLLC*HQGWCAHSDPQ
Trigger: CTGAGGATCACTATGAGCGCACCACCCCTGATGGCAGCATAGGAGAGATGGAGCACCCCGAGAATGACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS CCA 72 bp TTGCCCATCACAATGAGCTGTGGTTGCTTCTCCTCCTaGTCCTCTGCCACCTGCAGCCCAAATAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LPITMSCGCFSS*SSATCSPNSSW
Trigger: CCAGGAGCTATTTGGGCTGCAGGTGGCAGAGGACCAGGAGGAGAAGCAACCACAGCTCATTGTGATGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
ENST00000505937.2
CDS CCA 72 bp CAAACTCACTGCACTCCCGGGTACATGTGCCTGTCATaGCGACATCAGGCAAAGGGCGAAGGTCATTCTCGG +
Preference number: 6 (lower is better)
Translates to: QTHCTPGYMCLS*RHQAKGEGHSR
Trigger: CCGAGAATGACCTTCGCCCTTTGCCTGATGTCGCCATGACAGGCACATGTACCCGGGAGTGCAGTGAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287008.8
CDS CAA 72 bp TCTGAAGCCAGCGGGATGGGGAAGAGTGAGCCGATGTaGGTGTTCTCAGGGATGGCCAGAGTGATGACTGGT +
Preference number: 6 (lower is better)
Translates to: SEASGMGKSEPM*VFSGMARVMTG
Trigger: ACCAGTCATCACTCTGGCCATCCCTGAGAACACCAACATCGGCTCACTCTTCCCCATCCCGCTGGCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS CAA 90 bp ATGGCCAGAGTGATGACTGGTGAGGCGAAGTTGGGTGTGTTGTCATaGATGTCTTGTACTTCTATCTGGCCCTCTAGCAGCCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: MARVMTGEAKLGVLS*MSCTSIWPSSSRGL
Trigger: CAGCCCCCGGCTGCTAGAGGGCCAGATAGAAGTACAAGACATCAATGACAACACACCCAACTTCGCCTCACCAGTCATCACTCTGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS CAA 72 bp GTGATGACTGGTGAGGCGAAGTTGGGTGTGTTGTCATaGATGTCTTGTACTTCTATCTGGCCCTCTAGCAGC +
Preference number: 6 (lower is better)
Translates to: VMTGEAKLGVLS*MSCTSIWPSSS
Trigger: GCTGCTAGAGGGCCAGATAGAAGTACAAGACATCAATGACAACACACCCAACTTCGCCTCACCAGTCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287008.8
ENST00000357517.6
ENST00000394536.4
ENST00000503492.5
CDS GCA 72 bp TTAAATGATATAATACACATCATGTGTTTAGAACGGTaGCTGGCACCTAGGCTATTATTATTTGCTATCCCC +
Preference number: 6 (lower is better)
Translates to: LNDIIHIMCLER*LAPRLLLFAIP
Trigger: GGGGATAGCAAATAATAATAGCCTAGGTGCCAGGCACCGTTCTAAACACATGATGTGTATTATATCATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505937.2