Pregenerated sensors for PCCA-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000274605Ensembl transcript IDs: ENST00000612598.1, ENST00000654763.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACGCACGCCCCTGTCTCTCTCACTCCTGGGGTCGGCTCTGGCCGGTaGCCTCCAGCTCAGCTAGCGGCCGGACGCGCAGCCCGCCGACTA | + |
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Preference number: 5 (lower is better) Translates to: THAPVSLTPGVGSGR*PPAQLAAGRAARRL Trigger: TAGTCGGCGGGCTGCGCGTCCGGCCGCTAGCTGAGCTGGAGGCCACCGGCCAGAGCCGACCCCAGGAGTGAGAGAGACAGGGGCGTGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS CCA 90 bp | GGAACTCACGCACGCCCCTGTCTCTCTCACTCCTGGGGTCGGCTCTaGCCGGTGGCCTCCAGCTCAGCTAGCGGCCGGACGCGCAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: GTHARPCLSHSWGRL*PVASSSASGRTRSP Trigger: CGGGCTGCGCGTCCGGCCGCTAGCTGAGCTGGAGGCCACCGGCCAGAGCCGACCCCAGGAGTGAGAGAGACAGGGGCGTGCGTGAGTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS GCA 90 bp | CGTGGGTTGCTGAGCCGATGCTGGGAAGGTACGGGGTTTGCCCGGTaGAGGCCGCCGGAACTCACGCACGCCCCTGTCTCTCTCACTCCT | + |
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Preference number: 5 (lower is better) Translates to: RGLLSRCWEGTGFAR*RPPELTHAPVSLTP Trigger: AGGAGTGAGAGAGACAGGGGCGTGCGTGAGTTCCGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS GCA 90 bp | GGATGCACGTGGGTTGCTGAGCCGATGCTGGGAAGGTACGGGGTTTaGCCGGTGCAGGCCGCCGGAACTCACGCACGCCCCTGTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GCTWVAEPMLGRYGV*PVQAAGTHARPCLS Trigger: AGAGAGACAGGGGCGTGCGTGAGTTCCGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS CCA 90 bp | ATGACATTGACCGGCCTGGATGCACGTGGGTTGCTGAGCCGATGCTaGGAAGGTACGGGGTTTGCCCGGTGCAGGCCGCCGGAACTCACG | + |
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Preference number: 5 (lower is better) Translates to: MTLTGLDARGLLSRC*EGTGFARCRPPELT Trigger: CGTGAGTTCCGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS GCA 90 bp | TCAATGACATTGACCGGCCTGGATGCACGTGGGTTGCTGAGCCGATaGTGGGAAGGTACGGGGTTTGCCCGGTGCAGGCCGCCGGAACTC | + |
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Preference number: 5 (lower is better) Translates to: SMTLTGLDARGLLSR*WEGTGFARCRPPEL Trigger: GAGTTCCGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCATTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS TCA 90 bp | GGAACTTCGGATTCTCGGGACTCCAGGGTGGCCAAGGCGCGGAGGTaGCTCAATGACATTGACCGGCCTGGATGCACGTGGGTTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GTSDSRDSRVAKARR*LNDIDRPGCTWVAE Trigger: CTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCATTGAGTCACCTCCGCGCCTTGGCCACCCTGGAGTCCCGAGAATCCGAAGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 90 bp | AGTTTGGGCATTTGTCTGGAACTTCGGATTCTCGGGACTCCAGGGTaGCCAAGGCGCGGAGGTGACTCAATGACATTGACCGGCCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLGICLELRILGTPG*PRRGGDSMTLTGLD Trigger: ATCCAGGCCGGTCAATGTCATTGAGTCACCTCCGCGCCTTGGCCACCCTGGAGTCCCGAGAATCCGAAGTTCCAGACAAATGCCCAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 90 bp | AATTTACGCTTTCGAACATGCAGGAATGTAGTTTGGGCATTTGTCTaGAACTTCGGATTCTCGGGACTCCAGGGTGGCCAAGGCGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: NLRFRTCRNVVWAFV*NFGFSGLQGGQGAE Trigger: CTCCGCGCCTTGGCCACCCTGGAGTCCCGAGAATCCGAAGTTCCAGACAAATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 90 bp | CCAATAGGATGCTCCGAGCAGTGCACTCAGAAGAATGAACAGGTTTaGAGACAGTCCAAGTCTGCTGTGTCCTCAACTTCCTTGGGGGTA | + |
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Preference number: 5 (lower is better) Translates to: PIGCSEQCTQKNEQV*RQSKSAVSSTSLGV Trigger: TACCCCCAAGGAAGTTGAGGACACAGCAGACTTGGACTGTCTCCAAACCTGTTCATTCTTCTGAGTGCACTGCTCGGAGCATCCTATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS TCA 90 bp | TTCCTGAAGAGAAGGGGCCACATCATGACACATAGGGCCATAGAGTaGAGTATCAGGATTGGTCAGGAGGCAGAAGGAGCAAAGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: FLKRRGHIMTHRAIE*SIRIGQEAEGAKDR Trigger: TCTGTCCTTTGCTCCTTCTGCCTCCTGACCAATCCTGATACTTCACTCTATGGCCCTATGTGTCATGATGTGGCCCCTTCTCTTCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS TCA 90 bp | GGCTGCTTCTGTGTAGTGCCTAGAAAAGTCTCAGCAGCTGAGAGGTaGAAAGGTGTGGAGGATTGCATGGAAGGTTTTATAAGCCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: GCFCVVPRKVSAAER*KGVEDCMEGFISQA Trigger: GGCTTGGCTTATAAAACCTTCCATGCAATCCTCCACACCTTTTCACCTCTCAGCTGCTGAGACTTTTCTAGGCACTACACAGAAGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS GCA 90 bp | AAATCAGGTATAGTACCACATCGAACTGGAAAGGAGGCCAGGATATaGTGCCCAATAGGATGCTCCGAGCAGTGCACTCAGAAGAATGAA | + |
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Preference number: 5 (lower is better) Translates to: KSGIVPHRTGKEARI*CPIGCSEQCTQKNE Trigger: TTCATTCTTCTGAGTGCACTGCTCGGAGCATCCTATTGGGCAGCATATCCTGGCCTCCTTTCCAGTTCGATGTGGTACTATACCTGATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CCA 90 bp | TTTGTGCTTTGCAATTTACGCTTTCGAACATGCAGGAATGTAGTTTaGGCATTTGTCTGGAACTTCGGATTCTCGGGACTCCAGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: FVLCNLRFRTCRNVV*AFVWNFGFSGLQGG Trigger: GCCACCCTGGAGTCCCGAGAATCCGAAGTTCCAGACAAATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS GCA 90 bp | GTGAGCCACTGCTCCCGGCCACAATCTACAACTGGATTTGTGCTTTaGAATTTACGCTTTCGAACATGCAGGAATGTAGTTTGGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: VSHCSRPQSTTGFVL*NLRFRTCRNVVWAF Trigger: AAATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGTTGTAGATTGTGGCCGGGAGCAGTGGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CCA 90 bp | CTCATATTTTATTGGCCAGAAATCAGGTATAGTACCACATCGAACTaGAAAGGAGGCCAGGATATGCTGCCCAATAGGATGCTCCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: LIFYWPEIRYSTTSN*KGGQDMLPNRMLRA Trigger: TGCTCGGAGCATCCTATTGGGCAGCATATCCTGGCCTCCTTTCCAGTTCGATGTGGTACTATACCTGATTTCTGGCCAATAAAATATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CCA 72 bp | CCTGTCTCTCTCACTCCTGGGGTCGGCTCTGGCCGGTaGCCTCCAGCTCAGCTAGCGGCCGGACGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVSLTPGVGSGR*PPAQLAAGRAA Trigger: GGCTGCGCGTCCGGCCGCTAGCTGAGCTGGAGGCCACCGGCCAGAGCCGACCCCAGGAGTGAGAGAGACAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS CCA 72 bp | GCACGCCCCTGTCTCTCTCACTCCTGGGGTCGGCTCTaGCCGGTGGCCTCCAGCTCAGCTAGCGGCCGGACG | + |
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Preference number: 6 (lower is better) Translates to: ARPCLSHSWGRL*PVASSSASGRT Trigger: CGTCCGGCCGCTAGCTGAGCTGGAGGCCACCGGCCAGAGCCGACCCCAGGAGTGAGAGAGACAGGGGCGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS CCA 72 bp | ACCGGCCTGGATGCACGTGGGTTGCTGAGCCGATGCTaGGAAGGTACGGGGTTTGCCCGGTGCAGGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: TGLDARGLLSRC*EGTGFARCRPP Trigger: CGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS GCA 72 bp | CTGAGCCGATGCTGGGAAGGTACGGGGTTTGCCCGGTaGAGGCCGCCGGAACTCACGCACGCCCCTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LSRCWEGTGFAR*RPPELTHAPVS Trigger: AGAGACAGGGGCGTGCGTGAGTTCCGGCGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS GCA 72 bp | TTGACCGGCCTGGATGCACGTGGGTTGCTGAGCCGATaGTGGGAAGGTACGGGGTTTGCCCGGTGCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LTGLDARGLLSR*WEGTGFARCRP Trigger: CGGCCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CAA 72 bp | CCAGGGTGGCCAAGGCGCGGAGGTGACTCAATGACATaGACCGGCCTGGATGCACGTGGGTTGCTGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: PGWPRRGGDSMT*TGLDARGLLSR Trigger: TCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCATTGAGTCACCTCCGCGCCTTGGCCACCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CAA 90 bp | CGCGGAGGTGACTCAATGACATTGACCGGCCTGGATGCACGTGGGTaGCTGAGCCGATGCTGGGAAGGTACGGGGTTTGCCCGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RGGDSMTLTGLDARG*LSRCWEGTGFARCR Trigger: CCTGCACCGGGCAAACCCCGTACCTTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCATTGAGTCACCTCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CAA 90 bp | CTCGGGACTCCAGGGTGGCCAAGGCGCGGAGGTGACTCAATGACATaGACCGGCCTGGATGCACGTGGGTTGCTGAGCCGATGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGTPGWPRRGGDSMT*TGLDARGLLSRCWE Trigger: TTCCCAGCATCGGCTCAGCAACCCACGTGCATCCAGGCCGGTCAATGTCATTGAGTCACCTCCGCGCCTTGGCCACCCTGGAGTCCCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 72 bp | ATTTGTCTGGAACTTCGGATTCTCGGGACTCCAGGGTaGCCAAGGCGCGGAGGTGACTCAATGACATTGACC | + |
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Preference number: 6 (lower is better) Translates to: ICLELRILGTPG*PRRGGDSMTLT Trigger: GGTCAATGTCATTGAGTCACCTCCGCGCCTTGGCCACCCTGGAGTCCCGAGAATCCGAAGTTCCAGACAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 72 bp | TTTAGTAGAGATGGGGCTTCACCATGTTGGCCATGCTaGTCTCGAAGTGCTGACCTCGTGATCTGTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: FSRDGASPCWPC*SRSADLVICPP Trigger: AGGCGGACAGATCACGAGGTCAGCACTTCGAGACCAGCATGGCCAACATGGTGAAGCCCCATCTCTACTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS GCA 72 bp | ATAGTACCACATCGAACTGGAAAGGAGGCCAGGATATaGTGCCCAATAGGATGCTCCGAGCAGTGCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: IVPHRTGKEARI*CPIGCSEQCTQ Trigger: CTGAGTGCACTGCTCGGAGCATCCTATTGGGCAGCATATCCTGGCCTCCTTTCCAGTTCGATGTGGTACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS TCA 72 bp | AGAAGGGGCCACATCATGACACATAGGGCCATAGAGTaGAGTATCAGGATTGGTCAGGAGGCAGAAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: RRGHIMTHRAIE*SIRIGQEAEGA Trigger: TGCTCCTTCTGCCTCCTGACCAATCCTGATACTTCACTCTATGGCCCTATGTGTCATGATGTGGCCCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS GCA 72 bp | ACTGGAAAGGAGGCCAGGATATGCTGCCCAATAGGATaGTCCGAGCAGTGCACTCAGAAGAATGAACAGGTT | + |
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Preference number: 6 (lower is better) Translates to: TGKEARICCPIG*SEQCTQKNEQV Trigger: AACCTGTTCATTCTTCTGAGTGCACTGCTCGGAGCATCCTATTGGGCAGCATATCCTGGCCTCCTTTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS GCA 72 bp | AAGGATCTGCTCTCCTTTGCTACTGGAGACCCAGGCTaGTTCTGTGTAGTGCCTAGAAAAGTCTCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KDLLSFATGDPG*FCVVPRKVSAA Trigger: AGCTGCTGAGACTTTTCTAGGCACTACACAGAAGCAGCCTGGGTCTCCAGTAGCAAAGGAGAGCAGATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CCA 72 bp | TGCTCCGAGCAGTGCACTCAGAAGAATGAACAGGTTTaGAGACAGTCCAAGTCTGCTGTGTCCTCAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSEQCTQKNEQV*RQSKSAVSSTS Trigger: GGAAGTTGAGGACACAGCAGACTTGGACTGTCTCCAAACCTGTTCATTCTTCTGAGTGCACTGCTCGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS GCA 72 bp | GCCACTGCTCCCGGCCACAATCTACAACTGGATTTGTaGTTTGCAATTTACGCTTTCGAACATGCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: ATAPGHNLQLDL*FAIYAFEHAGM Trigger: CATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGTTGTAGATTGTGGCCGGGAGCAGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CAA 90 bp | CGTGAGCCACTGCTCCCGGCCACAATCTACAACTGGATTTGTGCTTaGCAATTTACGCTTTCGAACATGCAGGAATGTAGTTTGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: REPLLPATIYNWICA*QFTLSNMQECSLGI Trigger: AATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGTTGTAGATTGTGGCCGGGAGCAGTGGCTCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CAA 90 bp | ATTTGTGCTTTGCAATTTACGCTTTCGAACATGCAGGAATGTAGTTaGGGCATTTGTCTGGAACTTCGGATTCTCGGGACTCCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ICALQFTLSNMQECS*GICLELRILGTPGW Trigger: CCACCCTGGAGTCCCGAGAATCCGAAGTTCCAGACAAATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CCA 72 bp | TATTGGCCAGAAATCAGGTATAGTACCACATCGAACTaGAAAGGAGGCCAGGATATGCTGCCCAATAGGATG | + |
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Preference number: 6 (lower is better) Translates to: YWPEIRYSTTSN*KGGQDMLPNRM Trigger: CATCCTATTGGGCAGCATATCCTGGCCTCCTTTCCAGTTCGATGTGGTACTATACCTGATTTCTGGCCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CAA 72 bp | CTGCTCCCGGCCACAATCTACAACTGGATTTGTGCTTaGCAATTTACGCTTTCGAACATGCAGGAATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPATIYNWICA*QFTLSNMQECS Trigger: ACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGTTGTAGATTGTGGCCGGGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS GCA 72 bp | TGCTCCCGGCCACAATCTACAACTGGATTTGTGCTTTaGAATTTACGCTTTCGAACATGCAGGAATGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: CSRPQSTTGFVL*NLRFRTCRNVV Trigger: AACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGTTGTAGATTGTGGCCGGGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612598.1 |
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| CDS CAA 72 bp | TTGCAATTTACGCTTTCGAACATGCAGGAATGTAGTTaGGGCATTTGTCTGGAACTTCGGATTCTCGGGACT | + |
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Preference number: 6 (lower is better) Translates to: LQFTLSNMQECS*GICLELRILGT Trigger: AGTCCCGAGAATCCGAAGTTCCAGACAAATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000612598.1 ENST00000654763.1 |
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| CDS CAA 90 bp | AGAAGCGCGGCCCAAAGCCTTTATTGTCATTTCTGGATTTGTGCTTaGCAATTTACGCTTTCGAACATGCAGGAATGTAGTTTGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: RSAAQSLYCHFWICA*QFTLSNMQECSLGI Trigger: AATGCCCAAACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGAAATGACAATAAAGGCTTTGGGCCGCGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS GCA 72 bp | AATTGTCAACTCATGGTCAATCTTGGTCCAGTTAGCTaGCACCCACTGTCCTCAACTCCAGATTATTATGAA | + |
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Preference number: 6 (lower is better) Translates to: NCQLMVNLGPVS*HPLSSTPDYYE Trigger: TTCATAATAATCTGGAGTTGAGGACAGTGGGTGGCAGCTAACTGGACCAAGATTGACCATGAGTTGACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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| CDS CAA 72 bp | GCCCAAAGCCTTTATTGTCATTTCTGGATTTGTGCTTaGCAATTTACGCTTTCGAACATGCAGGAATGTAGT | + |
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Preference number: 6 (lower is better) Translates to: AQSLYCHFWICA*QFTLSNMQECS Trigger: ACTACATTCCTGCATGTTCGAAAGCGTAAATTGCAAAGCACAAATCCAGAAATGACAATAAAGGCTTTGGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654763.1 |
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