Pregenerated sensors for PCAT7 (Homo sapiens)
Ensembl gene IDs: ENSG00000231806Ensembl transcript IDs: ENST00000452148.2, ENST00000644721.1, ENST00000647389.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTCCACCGCCACCACCAACCGCAGCGAGGCGAGCCGCGCCACGGTaGCGCGGCTCAAGCCTCCAGCATACGACCTGTGACTCCTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: CPPPPPTAARRAAPR*RGSSLQHTTCDSFS Trigger: GGAAAAGGAGTCACAGGTCGTATGCTGGAGGCTTGAGCCGCGGCACCGTGGCGCGGCTCGCCTCGCTGCGGTTGGTGGTGGCGGTGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS GCA 90 bp | TGGGCAGCCCGTCCTATTTACAGACTGCTGCGGCTCCCTGGCAGCTaGCACAGTCCCCGAGGCCAGAGGGAGTTCCTTGAGGGCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WAARPIYRLLRLPGS*HSPRGQREFLEGPS Trigger: GCTGGGGCCCTCAAGGAACTCCCTCTGGCCTCGGGGACTGTGGCAGCTGCCAGGGAGCCGCAGCAGTCTGTAAATAGGACGGGCTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 90 bp | AGAAAGCAGCTCCATGTTTCTGGGCAGCCCGTCCTATTTACAGACTaGTGCGGCTCCCTGGCAGCTGCCACAGTCCCCGAGGCCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RKQLHVSGQPVLFTD*CGSLAAATVPEARG Trigger: CCCTCTGGCCTCGGGGACTGTGGCAGCTGCCAGGGAGCCGCAGCAGTCTGTAAATAGGACGGGCTGCCCAGAAACATGGAGCTGCTTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 90 bp | ATCTATCCCAAAACTATCTTCTTCTTCCTACCCCTCCAGCCGCGCTaGAATGTCCACCGCCACCACCAACCGCAGCGAGGCGAGCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: IYPKTIFFFLPLQPR*NVHRHHQPQRGEPR Trigger: GCGCGGCTCGCCTCGCTGCGGTTGGTGGTGGCGGTGGACATTGCAGCGCGGCTGGAGGGGTAGGAAGAAGAAGATAGTTTTGGGATAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 90 bp | CCTCTGTTCCTCCACAGCTCCGGCTCCTGTATGAATGCAATCCCGTaGCCTACATCATTGAGCAGGCAGGAGGCTTGGCGACCACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: PLFLHSSGSCMNAIP*PTSLSRQEAWRPRG Trigger: TCCCCGTGGTCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATTGCATTCATACAGGAGCCGGAGCTGTGGAGGAACAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS CCA 90 bp | CCAGTGAGCACCTGCCCTGCCTGCATCCGGAGAATTGCCTCTACCTaGACCTTTTGTCTCACACAGCAGTACCCTGACCTGCTGTGCACC | + |
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Preference number: 5 (lower is better) Translates to: PVSTCPACIRRIAST*TFCLTQQYPDLLCT Trigger: GGTGCACAGCAGGTCAGGGTACTGCTGTGTGAGACAAAAGGTCCAGGTAGAGGCAATTCTCCGGATGCAGGCAGGGCAGGTGCTCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 90 bp | CCCCATGGCCTACGTCATGGAGAAGGCTGGGGGAATGGCCACCACTaGGAAGGAGGCCGTGTTAGACGTCATTCCCACAGACATTCACCA | + |
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Preference number: 5 (lower is better) Translates to: PHGLRHGEGWGNGHH*EGGRVRRHSHRHSP Trigger: TGGTGAATGTCTGTGGGAATGACGTCTAACACGGCCTCCTTCCCAGTGGTGGCCATTCCCCCAGCCTTCTCCATGACGTAGGCCATGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 90 bp | GACGTGCTCGAGTTCCTGAAGGTGTATGAGAAGCACTCTGCCCAGTaGGCACCTGCCCTGCCTGCATCCGGAGAATTGCCTCTACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: DVLEFLKVYEKHSAQ*APALPASGELPLPG Trigger: TCCAGGTAGAGGCAATTCTCCGGATGCAGGCAGGGCAGGTGCTCACTGGGCAGAGTGCTTCTCATACACCTTCAGGAACTCGAGCACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 90 bp | ATCTTGAAAGGGGGTGCTCAGCAGGAGAAAGCAGCTCCATGTTTCTaGGCAGCCCGTCCTATTTACAGACTGCTGCGGCTCCCTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ILKGGAQQEKAAPCF*AARPIYRLLRLPGS Trigger: GCTGCCAGGGAGCCGCAGCAGTCTGTAAATAGGACGGGCTGCCCAGAAACATGGAGCTGCTTTCTCCTGCTGAGCACCCCCTTTCAAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 90 bp | ACTGCTGTACGAATGCAACCCCATGGCCTACGTCATGGAGAAGGCTaGGGGAATGGCCACCACTGGGAAGGAGGCCGTGTTAGACGTCAT | + |
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Preference number: 5 (lower is better) Translates to: TAVRMQPHGLRHGEG*GNGHHWEGGRVRRH Trigger: ATGACGTCTAACACGGCCTCCTTCCCAGTGGTGGCCATTCCCCCAGCCTTCTCCATGACGTAGGCCATGGGGTTGCATTCGTACAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 90 bp | GAGATCCTGGCAGGGCCAGCACAGATTTCTTATCGGCTTCCACACTaGGGAGCTGCAGCCCTCAGAAGTAAGCAAGGTTTCCTCGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: EILAGPAQISYRLPH*GAAALRSKQGFLVG Trigger: TCCTACGAGGAAACCTTGCTTACTTCTGAGGGCTGCAGCTCCGCAGTGTGGAAGCCGATAAGAAATCTGTGCTGGCCCTGCCAGGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 90 bp | TACCTTCTGATACAAGGAGGCCGCTACCCGGTCTTGTTTTCCAGCTaGGACTGCTGTACGAATGCAACCCCATGGCCTACGTCATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: YLLIQGGRYPVLFSS*DCCTNATPWPTSWR Trigger: TCTCCATGACGTAGGCCATGGGGTTGCATTCGTACAGCAGTCTCAGCTGGAAAACAAGACCGGGTAGCGGCCTCCTTGTATCAGAAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 90 bp | AAGTCGGTGAAGGAAGGCACGGCTGGGGAGGGTCTGCATTCACTATaGGTTCACACACAGCTTATTATACAGAGAGGTTTGCCAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: KSVKEGTAGEGLHSL*VHTQLIIQRGLPMA Trigger: GGCCATTGGCAAACCTCTCTGTATAATAAGCTGTGTGTGAACCCATAGTGAATGCAGACCCTCCCCAGCCGTGCCTTCCTTCACCGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 90 bp | GCAGGGCCCAGTCTGGACATAGGTGGGCACCAGAGCTTGTCAACATaGCAGAAGGAAGAGATGAACCATAGCATCTTTCCGGATCTCTAT | + |
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Preference number: 5 (lower is better) Translates to: AGPSLDIGGHQSLST*QKEEMNHSIFPDLY Trigger: ATAGAGATCCGGAAAGATGCTATGGTTCATCTCTTCCTTCTGTCATGTTGACAAGCTCTGGTGCCCACCTATGTCCAGACTGGGCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS TCA 90 bp | CTACTGTGTCCCAAAGCACCACTCCAGACAGCGGAGATGGAGCATTaGTCAAACACACATGACAGCCCTTGTGGAGTTCACGTGTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLCPKAPLQTAEMEH*SNTHDSPCGVHVLV Trigger: CACTAACACGTGAACTCCACAAGGGCTGTCATGTGTGTTTGATCAATGCTCCATCTCCGCTGTCTGGAGTGGTGCTTTGGGACACAGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 90 bp | TTTTCTGCCCTCAGTCATGAAAGCAGGGCCCAGTCTGGACATAGGTaGGCACCAGAGCTTGTCAACATGACAGAAGGAAGAGATGAACCA | + |
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Preference number: 5 (lower is better) Translates to: FSALSHESRAQSGHR*APELVNMTEGRDEP Trigger: TGGTTCATCTCTTCCTTCTGTCATGTTGACAAGCTCTGGTGCCCACCTATGTCCAGACTGGGCCCTGCTTTCATGACTGAGGGCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 90 bp | TTGAGCATCTACTGTGTCCCAAAGCACCACTCCAGACAGCGGAGATaGAGCATTGATCAAACACACATGACAGCCCTTGTGGAGTTCACG | + |
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Preference number: 5 (lower is better) Translates to: LSIYCVPKHHSRQRR*SIDQTHMTALVEFT Trigger: CGTGAACTCCACAAGGGCTGTCATGTGTGTTTGATCAATGCTCCATCTCCGCTGTCTGGAGTGGTGCTTTGGGACACAGTAGATGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS GCA 90 bp | CCCGAAGTTAGATTTAGCAGGCACTGCAGAGGAACCATGGGGTGTTaGATAAGGAGGGAGTTGAGATGGGCTTATAGGACTTGGGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: PEVRFSRHCRGTMGC*IRRELRWAYRTWGF Trigger: AAAACCCCAAGTCCTATAAGCCCATCTCAACTCCCTCCTTATGCAACACCCCATGGTTCCTCTGCAGTGCCTGCTAAATCTAACTTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS TCA 90 bp | GAGAATTGCCTCTACCTGGACCTTTTGTCTCACACAGCAGTACCCTaGCCTGCTGTGCACCTTACATTCCTAAATTATCTGAATGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: ENCLYLDLLSHTAVP*PAVHLTFLNYLNVR Trigger: GCGGACATTCAGATAATTTAGGAATGTAAGGTGCACAGCAGGTCAGGGTACTGCTGTGTGAGACAAAAGGTCCAGGTAGAGGCAATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 90 bp | GCAATGATCGCTTCTGCCAAAATGTCATTCTGTCCAGTATGCAGGTaGTCTGTCTCACATTTGCATCAGGTAATCTATTGCTGGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: AMIASAKMSFCPVCR*SVSHLHQVIYCWHW Trigger: CCAGTGCCAGCAATAGATTACCTGATGCAAATGTGAGACAGACCACCTGCATACTGGACAGAATGACATTTTGGCAGAAGCGATCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 90 bp | TTATCTGAATGTCCGCAAGCTGGAATGATCCAAGCCTCTGTGTGCTaGCTTGGACATCTTCCCATAATATTTGCTTTCTGGAACTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LSECPQAGMIQASVC*LGHLPIIFAFWNSH Trigger: GTGGGAGTTCCAGAAAGCAAATATTATGGGAAGATGTCCAAGTCAGCACACAGAGGCTTGGATCATTCCAGCTTGCGGACATTCAGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 90 bp | GAGAAGGCAATGATCGCTTCTGCCAAAATGTCATTCTGTCCAGTATaGAGGTGGTCTGTCTCACATTTGCATCAGGTAATCTATTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EKAMIASAKMSFCPV*RWSVSHLHQVIYCW Trigger: CCAGCAATAGATTACCTGATGCAAATGTGAGACAGACCACCTGCATACTGGACAGAATGACATTTTGGCAGAAGCGATCATTGCCTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 72 bp | GCTTGGCGACCACGGGGACCCAGCCTGTACTGGACGTaGAGCCCGAGGCAATTCACCAGCGAGTCCCCCTCA | + |
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Preference number: 6 (lower is better) Translates to: AWRPRGPSLYWT*SPRQFTSESPS Trigger: TGAGGGGGACTCGCTGGTGAATTGCCTCGGGCTTCACGTCCAGTACAGGCTGGGTCCCCGTGGTCGCCAAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS GCA 72 bp | AGGATGTGCAGGAATATCTCACCCCTCCAGCCGCGCTaGAATGTCCACCGCCACCACCAACCGCAGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: RMCRNISPLQPR*NVHRHHQPQRG Trigger: GCCTCGCTGCGGTTGGTGGTGGCGGTGGACATTGCAGCGCGGCTGGAGGGGTGAGATATTCCTGCACATCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000452148.2 ENST00000647389.1 |
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| CDS GCA 72 bp | CGTCCTATTTACAGACTGCTGCGGCTCCCTGGCAGCTaGCACAGTCCCCGAGGCCAGAGGGAGTTCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RPIYRLLRLPGS*HSPRGQREFLE Trigger: CTCAAGGAACTCCCTCTGGCCTCGGGGACTGTGGCAGCTGCCAGGGAGCCGCAGCAGTCTGTAAATAGGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | CTCCATGTTTCTGGGCAGCCCGTCCTATTTACAGACTaGTGCGGCTCCCTGGCAGCTGCCACAGTCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LHVSGQPVLFTD*CGSLAAATVPE Trigger: CTCGGGGACTGTGGCAGCTGCCAGGGAGCCGCAGCAGTCTGTAAATAGGACGGGCTGCCCAGAAACATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 72 bp | AATCCCGTGGCCTACATCATTGAGCAGGCAGGAGGCTaGGCGACCACGGGGACCCAGCCTGTACTGGACGTG | + |
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Preference number: 6 (lower is better) Translates to: NPVAYIIEQAGG*ATTGTQPVLDV Trigger: CACGTCCAGTACAGGCTGGGTCCCCGTGGTCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS CAA 90 bp | CACAGCTCCGGCTCCTGTATGAATGCAATCCCGTGGCCTACATCATaGAGCAGGCAGGAGGCTTGGCGACCACGGGGACCCAGCCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: HSSGSCMNAIPWPTS*SRQEAWRPRGPSLY Trigger: GTACAGGCTGGGTCCCCGTGGTCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATTGCATTCATACAGGAGCCGGAGCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS TCA 72 bp | ACGTCATTCCCACAGACATTCACCAGAGGGCGCCGGTaGTCTTGGGATCCCCCGACGACGTGCTCGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: TSFPQTFTRGRR*SWDPPTTCSSS Trigger: GGAACTCGAGCACGTCGTCGGGGGATCCCAAGATCACCGGCGCCCTCTGGTGAATGTCTGTGGGAATGACGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 72 bp | GGCTCCTGTATGAATGCAATCCCGTGGCCTACATCATaGAGCAGGCAGGAGGCTTGGCGACCACGGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: GSCMNAIPWPTS*SRQEAWRPRGP Trigger: GGGTCCCCGTGGTCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATTGCATTCATACAGGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS CAA 90 bp | TATGAATGCAATCCCGTGGCCTACATCATTGAGCAGGCAGGAGGCTaGGCGACCACGGGGACCCAGCCTGTACTGGACGTGAAGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: YECNPVAYIIEQAGG*ATTGTQPVLDVKPE Trigger: CTCGGGCTTCACGTCCAGTACAGGCTGGGTCCCCGTGGTCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATTGCATTCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS GCA 72 bp | AAAACTATCTTCTTCTTCCTACCCCTCCAGCCGCGCTaGAATGTCCACCGCCACCACCAACCGCAGCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: KTIFFFLPLQPR*NVHRHHQPQRG Trigger: GCCTCGCTGCGGTTGGTGGTGGCGGTGGACATTGCAGCGCGGCTGGAGGGGTAGGAAGAAGAAGATAGTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 72 bp | AGCCCGAGGCAATTCACCAGCGAGTCCCCCTCATTCTaGGGTCACCAGAGGATGTGCAGGAATATCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SPRQFTSESPSF*GHQRMCRNISP Trigger: GGGTGAGATATTCCTGCACATCCTCTGGTGACCCCAGAATGAGGGGGACTCGCTGGTGAATTGCCTCGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000452148.2 ENST00000647389.1 |
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| CDS CCA 72 bp | CTCCACAGCTCCGGCTCCTGTATGAATGCAATCCCGTaGCCTACATCATTGAGCAGGCAGGAGGCTTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LHSSGSCMNAIP*PTSLSRQEAWR Trigger: TCGCCAAGCCTCCTGCCTGCTCAATGATGTAGGCCACGGGATTGCATTCATACAGGAGCCGGAGCTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000452148.2 ENST00000644721.1 ENST00000647389.1 |
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| CDS CCA 72 bp | CTACGTCATGGAGAAGGCTGGGGGAATGGCCACCACTaGGAAGGAGGCCGTGTTAGACGTCATTCCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LRHGEGWGNGHH*EGGRVRRHSHR Trigger: TCTGTGGGAATGACGTCTAACACGGCCTCCTTCCCAGTGGTGGCCATTCCCCCAGCCTTCTCCATGACGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | CCCAGTGAGCACCTGCCCTGCCTGCATCCGGAGAATTaGCTCTACCTGGACCTTTTGTCTCACACAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PSEHLPCLHPEN*LYLDLLSHTAV Trigger: TACTGCTGTGTGAGACAAAAGGTCCAGGTAGAGGCAATTCTCCGGATGCAGGCAGGGCAGGTGCTCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | CCCGGTCTTGTTTTCCAGCTGAGACTGCTGTACGAATaGAACCCCATGGCCTACGTCATGGAGAAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGLVFQLRLLYE*NPMAYVMEKAG Trigger: CCCAGCCTTCTCCATGACGTAGGCCATGGGGTTGCATTCGTACAGCAGTCTCAGCTGGAAAACAAGACCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | ACCTGCCCTGCCTGCATCCGGAGAATTGCCTCTACCTaGACCTTTTGTCTCACACAGCAGTACCCTGACCTG | + |
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Preference number: 6 (lower is better) Translates to: TCPACIRRIAST*TFCLTQQYPDL Trigger: CAGGTCAGGGTACTGCTGTGTGAGACAAAAGGTCCAGGTAGAGGCAATTCTCCGGATGCAGGCAGGGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | AGCCCGAGGCAATTCACCAGCGAGTCCCCCTCATTCTaGGGTCACCAGAGGATGTGCAGGAATATCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: SPRQFTSESPSF*GHQRMCRNISP Trigger: AGGTGAGATATTCCTGCACATCCTCTGGTGACCCCAGAATGAGGGGGACTCGCTGGTGAATTGCCTCGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS GCA 72 bp | GCAGGGCCAGCACAGATTTCTTATCGGCTTCCACACTaGGGAGCTGCAGCCCTCAGAAGTAAGCAAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGPAQISYRLPH*GAAALRSKQGF Trigger: GAAACCTTGCTTACTTCTGAGGGCTGCAGCTCCGCAGTGTGGAAGCCGATAAGAAATCTGTGCTGGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 72 bp | CCCAAAGCACCACTCCAGACAGCGGAGATGGAGCATTaGTCAAACACACATGACAGCCCTTGTGGAGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PKAPLQTAEMEH*SNTHDSPCGVH Trigger: GTGAACTCCACAAGGGCTGTCATGTGTGTTTGATCAATGCTCCATCTCCGCTGTCTGGAGTGGTGCTTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CAA 90 bp | TTTCTGGAACTCCCACCTGTGCCTAAATGGTGGCTTCTTGGTATCTaGAAAGGGGGTGCTCAGCAGGAGAAAGCAGCTCCATGTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLELPPVPKWWLLGI*KGGAQQEKAAPCFW Trigger: CCAGAAACATGGAGCTGCTTTCTCCTGCTGAGCACCCCCTTTCAAGATACCAAGAAGCCACCATTTAGGCACAGGTGGGAGTTCCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | TACTGTGTCCCAAAGCACCACTCCAGACAGCGGAGATaGAGCATTGATCAAACACACATGACAGCCCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: YCVPKHHSRQRR*SIDQTHMTALV Trigger: CACAAGGGCTGTCATGTGTGTTTGATCAATGCTCCATCTCCGCTGTCTGGAGTGGTGCTTTGGGACACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS GCA 72 bp | AGATTTAGCAGGCACTGCAGAGGAACCATGGGGTGTTaGATAAGGAGGGAGTTGAGATGGGCTTATAGGACT | + |
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Preference number: 6 (lower is better) Translates to: RFSRHCRGTMGC*IRRELRWAYRT Trigger: AGTCCTATAAGCCCATCTCAACTCCCTCCTTATGCAACACCCCATGGTTCCTCTGCAGTGCCTGCTAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 72 bp | AAGGAAGGCACGGCTGGGGAGGGTCTGCATTCACTATaGGTTCACACACAGCTTATTATACAGAGAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KEGTAGEGLHSL*VHTQLIIQRGL Trigger: CAAACCTCTCTGTATAATAAGCTGTGTGTGAACCCATAGTGAATGCAGACCCTCCCCAGCCGTGCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 72 bp | CACTGTTCAGATGACAGTTGTGCATCTCCATCCTCTTaGCTGGAAAGCAACAGCAAAATTGACCCCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: HCSDDSCASPSS*LESNSKIDPGS Trigger: TGAGCCGGGGTCAATTTTGCTGTTGCTTTCCAGCAAAGAGGATGGAGATGCACAACTGTCATCTGAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS TCA 72 bp | TGTCCGCAAGCTGGAATGATCCAAGCCTCTGTGTGCTaGCTTGGACATCTTCCCATAATATTTGCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CPQAGMIQASVC*LGHLPIIFAFW Trigger: CCAGAAAGCAAATATTATGGGAAGATGTCCAAGTCAGCACACAGAGGCTTGGATCATTCCAGCTTGCGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 72 bp | CTCTACCTGGACCTTTTGTCTCACACAGCAGTACCCTaGCCTGCTGTGCACCTTACATTCCTAAATTATCTG | + |
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Preference number: 6 (lower is better) Translates to: LYLDLLSHTAVP*PAVHLTFLNYL Trigger: CAGATAATTTAGGAATGTAAGGTGCACAGCAGGTCAGGGTACTGCTGTGTGAGACAAAAGGTCCAGGTAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | ACTGTTCAGATGACAGTTGTGCATCTCCATCCTCTTTaGTGGAAAGCAACAGCAAAATTGACCCCGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: TVQMTVVHLHPL*WKATAKLTPAQ Trigger: TTGAGCCGGGGTCAATTTTGCTGTTGCTTTCCAGCAAAGAGGATGGAGATGCACAACTGTCATCTGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 72 bp | AATATTTGCTTTCTGGAACTCCCACCTGTGCCTAAATaGTGGCTTCTTGGTATCTTGAAAGGGGGTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: NICFLELPPVPK*WLLGILKGGAQ Trigger: CTGAGCACCCCCTTTCAAGATACCAAGAAGCCACCATTTAGGCACAGGTGGGAGTTCCAGAAAGCAAATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 72 bp | AGCCTCACAGGAAGGAAAAATACAGTATTCGTTCCCTaGGAAACTCCCACCAGCTCTGCATGTTTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLTGRKNTVFVP*ETPTSSACFAA Trigger: TGCAGCAAAACATGCAGAGCTGGTGGGAGTTTCCAAGGGAACGAATACTGTATTTTTCCTTCCTGTGAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 90 bp | GCCAAAATGTCATTCTGTCCAGTATGCAGGTGGTCTGTCTCACATTaGCATCAGGTAATCTATTGCTGGCACTGGCTTGATGAATGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AKMSFCPVCRWSVSH*HQVIYCWHWLDEWL Trigger: CAACCATTCATCAAGCCAGTGCCAGCAATAGATTACCTGATGCAAATGTGAGACAGACCACCTGCATACTGGACAGAATGACATTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 72 bp | TGTCCTACAATTATTCCCATTTTCAGATGGGGAAAGTaGGGCGTAGAGAGAGTGAGTAACTTGCGCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CPTIIPIFRWGK*GVERVSNLRKV Trigger: GACCTTGCGCAAGTTACTCACTCTCTCTACGCCTCACTTTCCCCATCTGAAAATGGGAATAATTGTAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS GCA 72 bp | CCTGGACCTTTTGTCTCACACAGCAGTACCCTGACCTaGTGTGCACCTTACATTCCTAAATTATCTGAATGT | + |
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Preference number: 6 (lower is better) Translates to: PGPFVSHSSTLT*CAPYIPKLSEC Trigger: ACATTCAGATAATTTAGGAATGTAAGGTGCACAGCAGGTCAGGGTACTGCTGTGTGAGACAAAAGGTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | GCAAGCTGGAATGATCCAAGCCTCTGTGTGCTGACTTaGACATCTTCCCATAATATTTGCTTTCTGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: ASWNDPSLCVLT*TSSHNICFLEL Trigger: GAGTTCCAGAAAGCAAATATTATGGGAAGATGTCCAAGTCAGCACACAGAGGCTTGGATCATTCCAGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | AACCAAATGGTTAACTGTTTTGTCTCAGATGCAACCTaGGGTGGGAGGAAACTTTTACAGCCTCACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NQMVNCFVSDAT*GGRKLLQPHRK Trigger: CTTCCTGTGAGGCTGTAAAAGTTTCCTCCCACCCCAGGTTGCATCTGAGACAAAACAGTTAACCATTTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | GTTCAGATGACAGTTGTGCATCTCCATCCTCTTTGCTaGAAAGCAACAGCAAAATTGACCCCGGCTCAATTA | + |
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Preference number: 6 (lower is better) Translates to: VQMTVVHLHPLC*KATAKLTPAQL Trigger: TAATTGAGCCGGGGTCAATTTTGCTGTTGCTTTCCAGCAAAGAGGATGGAGATGCACAACTGTCATCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CCA 72 bp | TACAAATGGGAGCTGTTGTTTCTTGTGACCAGGATCTaGTGTCTGATAATCGGTAACAGGGTGTATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: YKWELLFLVTRI*CLIIGNRVYES Trigger: GCTCTCATACACCCTGTTACCGATTATCAGACACCAGATCCTGGTCACAAGAAACAACAGCTCCCATTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CAA 72 bp | TCATTCTGTCCAGTATGCAGGTGGTCTGTCTCACATTaGCATCAGGTAATCTATTGCTGGCACTGGCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: SFCPVCRWSVSH*HQVIYCWHWLD Trigger: ATCAAGCCAGTGCCAGCAATAGATTACCTGATGCAAATGTGAGACAGACCACCTGCATACTGGACAGAATGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | ATGATCGCTTCTGCCAAAATGTCATTCTGTCCAGTATaGAGGTGGTCTGTCTCACATTTGCATCAGGTAATC | + |
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Preference number: 6 (lower is better) Translates to: MIASAKMSFCPV*RWSVSHLHQVI Trigger: GATTACCTGATGCAAATGTGAGACAGACCACCTGCATACTGGACAGAATGACATTTTGGCAGAAGCGATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | ATGAACATTCTGAGCAGTTCTAAAGGTGATGGGAGATaGTTTGACTCAGGGACCCAATTCAAAGATTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MNILSSSKGDGR*FDSGTQFKDSQ Trigger: CTGGGAATCTTTGAATTGGGTCCCTGAGTCAAAGCATCTCCCATCACCTTTAGAACTGCTCAGAATGTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CAA 72 bp | GGACTTGGGGTTTTGCTTGGTAATTCTAAAGAGGATTaGAGGAAGAGAGGGTCAGTCTGGATTGGATATTGT | + |
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Preference number: 6 (lower is better) Translates to: GLGVLLGNSKED*RKRGSVWIGYC Trigger: ACAATATCCAATCCAGACTGACCCTCTCTTCCTCAAATCCTCTTTAGAATTACCAAGCAAAACCCCAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS CAA 90 bp | GTTTGTCACTTCTCTAAAAGTCACTTTCAGTGCACCAGTGAAATATaGGAGGTAGCAGGCAAGATTGGAAAGCAGGTAATAACACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VCHFSKSHFQCTSEI*EVAGKIGKQVITLF Trigger: GAACAGTGTTATTACCTGCTTTCCAATCTTGCCTGCTACCTCCAATATTTCACTGGTGCACTGAAAGTGACTTTTAGAGAAGTGACAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS GCA 72 bp | TATGGGTTCACACACAGCTTATTATACAGAGAGGTTTaGCAATGGCCAAAAGTTTCAATCAATGTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: YGFTHSLLYREV*QWPKVSINVQL Trigger: CAGCTGAACATTGATTGAAACTTTTGGCCATTGGCAAACCTCTCTGTATAATAAGCTGTGTGTGAACCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | TGGTCTGTCTCACATTTGCATCAGGTAATCTATTGCTaGCACTGGCTTGATGAATGGTTGAATTTAACCAAA | + |
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Preference number: 6 (lower is better) Translates to: WSVSHLHQVIYC*HWLDEWLNLTK Trigger: TTTGGTTAAATTCAACCATTCATCAAGCCAGTGCCAGCAATAGATTACCTGATGCAAATGTGAGACAGACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CAA 72 bp | CTATGGGTTCACACACAGCTTATTATACAGAGAGGTTaGCCAATGGCCAAAAGTTTCAATCAATGTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LWVHTQLIIQRG*PMAKSFNQCSA Trigger: AGCTGAACATTGATTGAAACTTTTGGCCATTGGCAAACCTCTCTGTATAATAAGCTGTGTGTGAACCCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS CCA 72 bp | AGAGAGGGTCAGTCTGGATTGGATATTGTCTGGAAGTaGGTGCAATTAATGACTAGTTACCTTAATCATTTT | + |
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Preference number: 6 (lower is better) Translates to: REGQSGLDIVWK*VQLMTSYLNHF Trigger: AAAATGATTAAGGTAACTAGTCATTAATTGCACCCACTTCCAGACAATATCCAATCCAGACTGACCCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644721.1 |
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| CDS TCA 72 bp | AGATTCTACTTAACTCCACAGTGTAGGTTAACCATTTaGACTCTGAATTTTTCTTGTTGTAATTTGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: RFYLTPQCRLTI*TLNFSCCNLPI Trigger: GATGGGCAAATTACAACAAGAAAAATTCAGAGTTCAAATGGTTAACCTACACTGTGGAGTTAAGTAGAATCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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| CDS TCA 72 bp | TGCAATATAGTCAATAGACAAGAGGCCATTTCTTTGTaGTTAGCTATAAAAGCTGGCTTCAAGTTGTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: CNIVNRQEAISL*LAIKAGFKLFF Trigger: GAAAAACAACTTGAAGCCAGCTTTTATAGCTAATCACAAAGAAATGGCCTCTTGTCTATTGACTATATTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647389.1 |
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