Pregenerated sensors for PCAT14 (Homo sapiens)
Ensembl gene IDs: ENSG00000280623Ensembl transcript IDs: ENST00000626825.1, ENST00000627127.1, ENST00000629869.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACCACACTCGAGAGTCCCTTCACCCTAGAGAAAAGCATCCACGTTaGGCACCAGATGGAGTGGCCTGCGCCTCCACAGCTGTGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: DHTRESLHPREKHPR*APDGVACASTAVGI Trigger: AATGCCCACAGCTGTGGAGGCGCAGGCCACTCCATCTGGTGCCCAACGTGGATGCTTTTCTCTAGGGTGAAGGGACTCTCGAGTGTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000629869.1 |
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| CDS TCA 90 bp | ATGTTTCCTGATGCAGCACCAGCTGGTCCCTCCATTCGGGGTCCCTaGCTTCCCACAACAGCCAGGCTTTCTTGGGCAGAGGTTCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: MFPDAAPAGPSIRGP*LPTTARLSWAEVPV Trigger: CACAGGAACCTCTGCCCAAGAAAGCCTGGCTGTTGTGGGAAGTCAGGGACCCCGAATGGAGGGACCAGCTGGTGCTGCATCAGGAAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS GCA 90 bp | AACAGCCAGGCTTTCTTGGGCAGAGGTTCCTGTGGCTTTCCACAGTaGATTGAGCCCCTGGTTAATCGAGAATGGAGAATGGCGATGACT | + |
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Preference number: 5 (lower is better) Translates to: NSQAFLGRGSCGFPQ*IEPLVNREWRMAMT Trigger: AGTCATCGCCATTCTCCATTCTCGATTAACCAGGGGCTCAATGCACTGTGGAAAGCCACAGGAACCTCTGCCCAAGAAAGCCTGGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CCA 90 bp | GTCTCTTTGGAGCTGCTGGATACACCTGTAGACTGGCGAGTCGATTaGGGTGTCTCCATCTCCACACTTTTCTTTGCATCTCCAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: VSLELLDTPVDWRVD*GVSISTLFFASPVS Trigger: ACTCACTGGAGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGTCTACAGGTGTATCCAGCAGCTCCAAAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS CCA 90 bp | TTGCTGGTTGCTGTCTCTTTGGAGCTGCTGGATACACCTGTAGACTaGCGAGTCGATTGGGGTGTCTCCATCTCCACACTTTTCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLVAVSLELLDTPVD*RVDWGVSISTLFFA Trigger: TGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGTCTACAGGTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS CCA 90 bp | CCGTTAAAATATGGATGGATAGCGAAGCCTCCCATGGTCGGTCCATaGACACAAGGATCCACACACCCTCTCTTGCTCTTCCTAGTAGAA | + |
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Preference number: 5 (lower is better) Translates to: PLKYGWIAKPPMVGP*TQGSTHPLLLFLVE Trigger: TTCTACTAGGAAGAGCAAGAGAGGGTGTGTGGATCCTTGTGTCCATGGACCGACCATGGGAGGCTTCGCTATCCATCCATATTTTAACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 90 bp | ATTAGCTGCAGCTGCTCCTGCAGACTTGGGAAGACTTACCACCGTTaGTACAATCATCAGAGCTGCAAGCAGCATATTCTCTGGAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ISCSCSCRLGKTYHR*YNHQSCKQHILWSW Trigger: CCAACTCCAGAGAATATGCTGCTTGCAGCTCTGATGATTGTATCAACGGTGGTAAGTCTTCCCAAGTCTGCAGGAGCAGCTGCAGCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 90 bp | TTTTTGACAAAACCACCATCGTCACTATGGCCCATTCTTGCTGGTTaGTGTCTCTTTGGAGCTGCTGGATACACCTGTAGACTGGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: FLTKPPSSLWPILAG*CLFGAAGYTCRLAS Trigger: ACTCGCCAGTCTACAGGTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAAGAATGGGCCATAGTGACGATGGTGGTTTTGTCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS CCA 90 bp | ATCCTGGTGCCTTCCCTAGGCAAACAGGAGGATAAGGATACCCAATaGAAATATTCATCATCATTCCTTCTTCAGGTTGGGCAGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: ILVPSLGKQEDKDTQ*KYSSSFLLQVGQGN Trigger: GTTGCCCTGCCCAACCTGAAGAAGGAATGATGATGAATATTTCCATTGGGTATCCTTATCCTCCTGTTTGCCTAGGGAAGGCACCAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 90 bp | TCGATTGGGGTGTCTCCATCTCCACACTTTTCTTTGCATCTCCAGTaGGTTCATTGTAGAACTTTAAATGTCGCAAGGCTGACCGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SIGVSPSPHFSLHLQ*VHCRTLNVARLTVD Trigger: GTCCACGGTCAGCCTTGCGACATTTAAAGTTCTACAATGAACTCACTGGAGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS GCA 90 bp | TTTTTGACAAAACCACCATCGTCACTATGGCCCATTCTTGCTGGTTaGTGTCTCTTTGGAGCTGCTGGATACACCTGTAGACTAACAACA | + |
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Preference number: 5 (lower is better) Translates to: FLTKPPSSLWPILAG*CLFGAAGYTCRLTT Trigger: TGTTGTTAGTCTACAGGTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAAGAATGGGCCATAGTGACGATGGTGGTTTTGTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CCA 90 bp | TTCTGTTCTTCTGATATCACCATTTTGTTTACCTGGCGAGTCGATTaGGGTGTCTCCATCTCCACACTTTTCTTTGCATCTCCAGTGAGT | + |
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Preference number: 5 (lower is better) Translates to: FCSSDITILFTWRVD*GVSISTLFFASPVS Trigger: ACTCACTGGAGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGGTAAACAAAATGGTGATATCAGAAGAACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 90 bp | TCTTGTTCCTATAGCTTGATTTCCAGAACAAATTCTAATGTGGTGTaGGGCCACAGTAAGCTTCCTAATTCTGGATGTTCAGGACCAGTA | + |
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Preference number: 5 (lower is better) Translates to: SCSYSLISRTNSNVV*GHSKLPNSGCSGPV Trigger: TACTGGTCCTGAACATCCAGAATTAGGAAGCTTACTGTGGCCTCACACCACATTAGAATTTGTTCTGGAAATCAAGCTATAGGAACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 90 bp | ACAAGGATCCACACACCCTCTCTTGCTCTTCCTAGTAGAATACGGTaGTGCCAATTAAAAGTCAAATCAATGCAAGTAAACATTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: TRIHTPSLALPSRIR*CQLKVKSMQVNIPQ Trigger: TTGTGGAATGTTTACTTGCATTGATTTGACTTTTAATTGGCAGCACCGTATTCTACTAGGAAGAGCAAGAGAGGGTGTGTGGATCCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 90 bp | TGTGGTGTAACACAAAAATCTGATGTATTCCAGTCACATCGTAACTaGAAAAGATATTCCAAGCTCATGAGCCTCTCCCATCCAAATGAC | + |
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Preference number: 5 (lower is better) Translates to: CGVTQKSDVFQSHRN*KRYSKLMSLSHPND Trigger: GTCATTTGGATGGGAGAGGCTCATGAGCTTGGAATATCTTTTTCAGTTACGATGTGACTGGAATACATCAGATTTTTGTGTTACACCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 90 bp | CCAGAGCAAAATCAGAAACTCCTGATAAGGGTCTATGTTCAGCGGTaGATGTATTGTCTTGATAAACATCTTAACAGAAAACAGGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: PEQNQKLLIRVYVQR*MYCLDKHLNRKQGS Trigger: TGAACCCTGTTTTCTGTTAAGATGTTTATCAAGACAATACATGCACCGCTGAACATAGACCCTTATCAGGAGTTTCTGATTTTGCTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 90 bp | AAAGTTCCCTGTTCTGGAAACCATGGGCAGAATTGTTCTATTGTTTaGAATAGCGTAATTAGATTTTCTGTAGAAGCTCTAACTCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: KVPCSGNHGQNCSIV*NSVIRFSVEALTPP Trigger: AGGGGGAGTTAGAGCTTCTACAGAAAATCTAATTACGCTATTTCAAACAATAGAACAATTCTGCCCATGGTTTCCAGAACAGGGAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS TCA 72 bp | GATGCAGCACCAGCTGGTCCCTCCATTCGGGGTCCCTaGCTTCCCACAACAGCCAGGCTTTCTTGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: DAAPAGPSIRGP*LPTTARLSWAE Trigger: CTCTGCCCAAGAAAGCCTGGCTGTTGTGGGAAGTCAGGGACCCCGAATGGAGGGACCAGCTGGTGCTGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CCA 72 bp | TATGGATGGATAGCGAAGCCTCCCATGGTCGGTCCATaGACACAAGGATCCACACACCCTCTCTTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YGWIAKPPMVGP*TQGSTHPLLLF Trigger: GAAGAGCAAGAGAGGGTGTGTGGATCCTTGTGTCCATGGACCGACCATGGGAGGCTTCGCTATCCATCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CCA 72 bp | ACACAAGCTTACCGCAAGGCTGACCGTGGACGTACTTaGGACTCTCTCGTCAACTTGTCCTCAATGACCACA | + |
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Preference number: 6 (lower is better) Translates to: TQAYRKADRGRT*DSLVNLSSMTT Trigger: TGTGGTCATTGAGGACAAGTTGACGAGAGAGTCCCAAGTACGTCCACGGTCAGCCTTGCGGTAAGCTTGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS CAA 72 bp | TCTTGGGCAGAGGTTCCTGTGGCTTTCCACAGTGCATaGAGCCCCTGGTTAATCGAGAATGGAGAATGGCGA | + |
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Preference number: 6 (lower is better) Translates to: SWAEVPVAFHSA*SPWLIENGEWR Trigger: TCGCCATTCTCCATTCTCGATTAACCAGGGGCTCAATGCACTGTGGAAAGCCACAGGAACCTCTGCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CAA 72 bp | GGAGCTGCTGGATACACCTGTAGACTGGCGAGTCGATaGGGGTGTCTCCATCTCCACACTTTTCTTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GAAGYTCRLASR*GCLHLHTFLCI Trigger: GATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGTCTACAGGTGTATCCAGCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS CAA 90 bp | TGTCTCTTTGGAGCTGCTGGATACACCTGTAGACTGGCGAGTCGATaGGGGTGTCTCCATCTCCACACTTTTCTTTGCATCTCCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: CLFGAAGYTCRLASR*GCLHLHTFLCISSE Trigger: CTCACTGGAGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGTCTACAGGTGTATCCAGCAGCTCCAAAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS GCA 72 bp | GCTTTCTTGGGCAGAGGTTCCTGTGGCTTTCCACAGTaGATTGAGCCCCTGGTTAATCGAGAATGGAGAATG | + |
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Preference number: 6 (lower is better) Translates to: AFLGRGSCGFPQ*IEPLVNREWRM Trigger: CATTCTCCATTCTCGATTAACCAGGGGCTCAATGCACTGTGGAAAGCCACAGGAACCTCTGCCCAAGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CCA 72 bp | GACAAAACCACCATCGTCACTATGGCCCATTCTTGCTaGTTGCTGTCTCTTTGGAGCTGCTGGATACACCTG | + |
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Preference number: 6 (lower is better) Translates to: DKTTIVTMAHSC*LLSLWSCWIHL Trigger: CAGGTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAAGAATGGGCCATAGTGACGATGGTGGTTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CCA 72 bp | GAGCTGCTGGATACACCTGTAGACTGGCGAGTCGATTaGGGTGTCTCCATCTCCACACTTTTCTTTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ELLDTPVDWRVD*GVSISTLFFAS Trigger: AGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGTCTACAGGTGTATCCAGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS GCA 72 bp | AAACCACCATCGTCACTATGGCCCATTCTTGCTGGTTaGTGTCTCTTTGGAGCTGCTGGATACACCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: KPPSSLWPILAG*CLFGAAGYTCR Trigger: TCTACAGGTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAAGAATGGGCCATAGTGACGATGGTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS TCA 72 bp | AGCTGCTCCTGCAGACTTGGGAAGACTTACCACCGTTaGTACAATCATCAGAGCTGCAAGCAGCATATTCTC | + |
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Preference number: 6 (lower is better) Translates to: SCSCRLGKTYHR*YNHQSCKQHIL Trigger: GAGAATATGCTGCTTGCAGCTCTGATGATTGTATCAACGGTGGTAAGTCTTCCCAAGTCTGCAGGAGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 72 bp | TTTGACAAAACCACCATCGTCACTATGGCCCATTCTTaGTGGTTGCTGTCTCTTTGGAGCTGCTGGATACAC | + |
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Preference number: 6 (lower is better) Translates to: FDKTTIVTMAHS*WLLSLWSCWIH Trigger: GTGTATCCAGCAGCTCCAAAGAGACAGCAACCAGCAAGAATGGGCCATAGTGACGATGGTGGTTTTGTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS TCA 72 bp | TTAACAGAAAACAGGGTTCAGAGCAAAGAACCGGCCTaGCCTCAAATTTACCAGGACTGGGGTTTCCCAATC | + |
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Preference number: 6 (lower is better) Translates to: LTENRVQSKEPA*PQIYQDWGFPI Trigger: GATTGGGAAACCCCAGTCCTGGTAAATTTGAGGTCAGGCCGGTTCTTTGCTCTGAACCCTGTTTTCTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 72 bp | GGCAGGGCAACAGTCATCTGTGGGGCCAGGCACCCATaGACTATTATTAACATCTACTTCAATAGGATTATC | + |
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Preference number: 6 (lower is better) Translates to: GRATVICGARHP*TIINIYFNRII Trigger: GATAATCCTATTGAAGTAGATGTTAATAATAGTGCATGGGTGCCTGGCCCCACAGATGACTGTTGCCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | CAAAGGGCAGAAGGCAGAGCAAAGATGACATGCTTCTaGAGAAACAGGACCAGAGCAAAATCAGAAACTCCT | + |
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Preference number: 6 (lower is better) Translates to: QRAEGRAKMTCF*RNRTRAKSETP Trigger: AGGAGTTTCTGATTTTGCTCTGGTCCTGTTTCTTCAGAAGCATGTCATCTTTGCTCTGCCTTCTGCCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | CTGAGCCATTACAGACTCTGCTACATATTTACAATGTaGACTTTCCGTTCCTTGCTGGGATTCTGTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSHYRLCYIFTM*TFRSLLGFCPC Trigger: GCAGGGACAGAATCCCAGCAAGGAACGGAAAGTTCACATTGTAAATATGTAGCAGAGTCTGTAATGGCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS CCA 72 bp | TTTCCACAGTGCATTGAGCCCCTGGTTAATCGAGAATaGAGAATGGCGATGACTTTTACCAAACATACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FPQCIEPLVNRE*RMAMTFTKHTA Trigger: GGCAGTATGTTTGGTAAAAGTCATCGCCATTCTCCATTCTCGATTAACCAGGGGCTCAATGCACTGTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CAA 90 bp | TCCTTGATGGAAGGCAACTTTTTCTGTTCTTCTGATATCACCATTTaGTTTACCTGGCGAGTCGATTGGGGTGTCTCCATCTCCACACTT | + |
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Preference number: 6 (lower is better) Translates to: SLMEGNFFCSSDITI*FTWRVDWGVSISTL Trigger: AAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGGTAAACAAAATGGTGATATCAGAAGAACAGAAAAAGTTGCCTTCCATCAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CCA 72 bp | TCTGATATCACCATTTTGTTTACCTGGCGAGTCGATTaGGGTGTCTCCATCTCCACACTTTTCTTTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SDITILFTWRVD*GVSISTLFFAS Trigger: AGATGCAAAGAAAAGTGTGGAGATGGAGACACCCCAATCGACTCGCCAGGTAAACAAAATGGTGATATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | TTGAGCCCCTGGTTAATCGAGAATGGAGAATGGCGATaGCTTTTACCAAACATACTGCCTGCAAACATATTG | + |
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Preference number: 6 (lower is better) Translates to: LSPWLIENGEWR*LLPNILPANIL Trigger: CAATATGTTTGCAGGCAGTATGTTTGGTAAAAGTCATCGCCATTCTCCATTCTCGATTAACCAGGGGCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS TCA 72 bp | GTGTCTCCATCTCCACACTTTTCTTTGCATCTCCAGTaGGTTCATTGTAGAACTTTAAATGTCGCAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VSPSPHFSLHLQ*VHCRTLNVARL Trigger: CAGCCTTGCGACATTTAAAGTTCTACAATGAACTCACTGGAGATGCAAAGAAAAGTGTGGAGATGGAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626825.1 |
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| CDS CAA 72 bp | ATGGCCCCAATGATTCTGGACCTCCTTCCCCCAATTTaGATGATTCAGGGTATATTATCTCCTGTAATTGAC | + |
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Preference number: 6 (lower is better) Translates to: MAPMILDLLPPI*MIQGILSPVID Trigger: GTCAATTACAGGAGATAATATACCCTGAATCATCAAAATTGGGGGAAGGAGGTCCAGAATCATTGGGGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS CAA 90 bp | CTAACTTTGGTCAAGGTGATGAAATTCCCTTTTCACCCCATTTCCTaGGACAGAGTGATTCTAACCTTCTATAAACCTGGTCCAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LTLVKVMKFPFHPIS*DRVILTFYKPGPAF Trigger: AAAGGCTGGACCAGGTTTATAGAAGGTTAGAATCACTCTGTCCAAGGAAATGGGGTGAAAAGGGAATTTCATCACCTTGACCAAAGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 72 bp | CACACACCCTCTCTTGCTCTTCCTAGTAGAATACGGTaGTGCCAATTAAAAGTCAAATCAATGCAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: HTPSLALPSRIR*CQLKVKSMQVN Trigger: GTTTACTTGCATTGATTTGACTTTTAATTGGCAGCACCGTATTCTACTAGGAAGAGCAAGAGAGGGTGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 72 bp | TGGAGAATGGCGATGACTTTTACCAAACATACTGCCTaGAAACATATTGTTAACAAGGTACATCCTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WRMAMTFTKHTA*KHIVNKVHPAQ Trigger: CTGTGCAGGATGTACCTTGTTAACAATATGTTTGCAGGCAGTATGTTTGGTAAAAGTCATCGCCATTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS CCA 72 bp | TTAGAATTCCTTTTAATACTTCCGTTAAAATATGGATaGATAGCGAAGCCTCCCATGGTCGGTCCATGGACA | + |
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Preference number: 6 (lower is better) Translates to: LEFLLILPLKYG*IAKPPMVGPWT Trigger: TGTCCATGGACCGACCATGGGAGGCTTCGCTATCCATCCATATTTTAACGGAAGTATTAAAAGGAATTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CCA 72 bp | CTAGTTAGAATTCCTTTTAATACTTCCGTTAAAATATaGATGGATAGCGAAGCCTCCCATGGTCGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LVRIPFNTSVKI*MDSEASHGRSM Trigger: CATGGACCGACCATGGGAGGCTTCGCTATCCATCCATATTTTAACGGAAGTATTAAAAGGAATTCTAACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 72 bp | GTCAAGGTGATGAAATTCCCTTTTCACCCCATTTCCTaGGACAGAGTGATTCTAACCTTCTATAAACCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VKVMKFPFHPIS*DRVILTFYKPG Trigger: ACCAGGTTTATAGAAGGTTAGAATCACTCTGTCCAAGGAAATGGGGTGAAAAGGGAATTTCATCACCTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | AACTTTAAATGTCTAGTGGGTATCCAAACAGGAAGCTaGTTTTCTCCTGGTGAAACACAAGCAAAACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NFKCLVGIQTGS*FSPGETQAKPL Trigger: GAGAGGTTTTGCTTGTGTTTCACCAGGAGAAAATCAGCTTCCTGTTTGGATACCCACTAGACATTTAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | AGTCACATCGTAACTGAAAAAGATATTCCAAGCTCATaGGCCTCTCCCATCCAAATGACAGTTTGTCTAAGA | + |
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Preference number: 6 (lower is better) Translates to: SHIVTEKDIPSS*ASPIQMTVCLR Trigger: TCTTAGACAAACTGTCATTTGGATGGGAGAGGCTCATGAGCTTGGAATATCTTTTTCAGTTACGATGTGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 72 bp | CCTCAAGGGACCCAGTCTATCATAGTTCAAAATTCATaGTTTTGTACTACACTGCAGTATCAGCCACACATT | + |
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Preference number: 6 (lower is better) Translates to: PQGTQSIIVQNS*FCTTLQYQPHI Trigger: AATGTGTGGCTGATACTGCAGTGTAGTACAAAACAATGAATTTTGAACTATGATAGACTGGGTCCCTTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 90 bp | TGTGTCAGCTTCTTTAATTGTGCCTATATTGGCAACTCTGCTTCCTaGATGGAAGGCAACTTTTTCTGTTCTTCTGATATCACCATTTTG | + |
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Preference number: 6 (lower is better) Translates to: CVSFFNCAYIGNSAS*MEGNFFCSSDITIL Trigger: CAAAATGGTGATATCAGAAGAACAGAAAAAGTTGCCTTCCATCAAGGAAGCAGAGTTGCCAATATAGGCACAATTAAAGAAGCTGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | TATAGCTTGATTTCCAGAACAAATTCTAATGTGGTGTaGGGCCACAGTAAGCTTCCTAATTCTGGATGTTCA | + |
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Preference number: 6 (lower is better) Translates to: YSLISRTNSNVV*GHSKLPNSGCS Trigger: TGAACATCCAGAATTAGGAAGCTTACTGTGGCCTCACACCACATTAGAATTTGTTCTGGAAATCAAGCTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS GCA 72 bp | ACACCCTCTCTTGCTCTTCCTAGTAGAATACGGTGCTaGCAATTAAAAGTCAAATCAATGCAAGTAAACATT | + |
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Preference number: 6 (lower is better) Translates to: TPSLALPSRIRC*QLKVKSMQVNI Trigger: AATGTTTACTTGCATTGATTTGACTTTTAATTGGCAGCACCGTATTCTACTAGGAAGAGCAAGAGAGGGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 72 bp | TCCAAGCTCATGAGCCTCTCCCATCCAAATGACAGTTaGTCTAAGATCATTAATTTGGTTTGCCAATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SKLMSLSHPNDS*SKIINLVCQFL Trigger: CAAAAATTGGCAAACCAAATTAATGATCTTAGACAAACTGTCATTTGGATGGGAGAGGCTCATGAGCTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 90 bp | CAGGGTATATTATCTCCTGTAATTGACTGTAGTCAACATTTTGCGTaGACTGAGCCATTACAGACTCTGCTACATATTTACAATGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: QGILSPVIDCSQHFA*TEPLQTLLHIYNVN Trigger: GTTCACATTGTAAATATGTAGCAGAGTCTGTAATGGCTCAGTCAACGCAAAATGTTGACTACAGTCAATTACAGGAGATAATATACCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS GCA 72 bp | TTGCTAGGAAAAGAATTTAGCAATATCTCTCCTACTTaGACGTCCATTTATAGGCTCTCTGCAAGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LLGKEFSNISPT*TSIYRLSARRK Trigger: TTTTCTTCTTGCAGAGAGCCTATAAATGGACGTGCAAGTAGGAGAGATATTGCTAAATTCTTTTCCTAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS CAA 72 bp | TTATCTCCTGTAATTGACTGTAGTCAACATTTTGCGTaGACTGAGCCATTACAGACTCTGCTACATATTTAC | + |
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Preference number: 6 (lower is better) Translates to: LSPVIDCSQHFA*TEPLQTLLHIY Trigger: GTAAATATGTAGCAGAGTCTGTAATGGCTCAGTCAACGCAAAATGTTGACTACAGTCAATTACAGGAGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS TCA 72 bp | GTTTTACAATCAATTTGTACAATAGTGGTCCTGAGGTaGCGTATATCCTCAGCTTACAAAGATAACAGGATT | + |
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Preference number: 6 (lower is better) Translates to: VLQSICTIVVLR*RISSAYKDNRI Trigger: AATCCTGTTATCTTTGTAAGCTGAGGATATACGTCACCTCAGGACCACTATTGTACAAATTGATTGTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000626825.1 ENST00000627127.1 |
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| CDS GCA 72 bp | AATCAGAAACTCCTGATAAGGGTCTATGTTCAGCGGTaGATGTATTGTCTTGATAAACATCTTAACAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: NQKLLIRVYVQR*MYCLDKHLNRK Trigger: TTTTCTGTTAAGATGTTTATCAAGACAATACATGCACCGCTGAACATAGACCCTTATCAGGAGTTTCTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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| CDS TCA 72 bp | TGTTCTGGAAACCATGGGCAGAATTGTTCTATTGTTTaGAATAGCGTAATTAGATTTTCTGTAGAAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: CSGNHGQNCSIV*NSVIRFSVEAL Trigger: TAGAGCTTCTACAGAAAATCTAATTACGCTATTTCAAACAATAGAACAATTCTGCCCATGGTTTCCAGAACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629869.1 |
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| CDS CAA 72 bp | TGCAATTCTTTCCCTAGGGTCTTAGTATTATATTCCTaGCTAGGAAAAGAATTTAGCAATATCTCTCCTACT | + |
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Preference number: 6 (lower is better) Translates to: CNSFPRVLVLYS*LGKEFSNISPT Trigger: AGTAGGAGAGATATTGCTAAATTCTTTTCCTAGCAAGGAATATAATACTAAGACCCTAGGGAAAGAATTGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627127.1 |
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