RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCARE (Homo sapiens)

Ensembl gene IDs: ENSG00000179270

Ensembl transcript IDs: ENST00000331664.6, ENST00000602958.1

Found 698 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACCTGGTCCATCCTCACGTGCTTACCTTGGCCCCTGCCCTGCCTaGGTGGCTGGACTTCCCTGCGTTGCCTGCAGTCCAGGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: EPGPSSRAYLGPCPA*VAGLPCVACSPGSS
Trigger: GGAGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGGTAAGCACGTGAGGATGGACCAGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp CCGGGTGCCCTGTACCCCTTCGTCTGCTGCCTGCAATATGGTGGGTaGGCACTTCCTGCTGCTTGCCAGCCTAGCCTGGCGAGGGACAAC +
Preference number: 1 (lower is better)
Translates to: PGALYPFVCCLQYGG*ALPAACQPSLARDN
Trigger: GTTGTCCCTCGCCAGGCTAGGCTGGCAAGCAGCAGGAAGTGCCCACCCACCATATTGCAGGCAGCAGACGAAGGGGTACAGGGCACCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp TCCATCCTCACGTGCTTACCTTGGCCCCTGCCCTGCCTGGGTGGCTaGACTTCCCTGCGTTGCCTGCAGTCCAGGCAGCTCCTAAGTGTC +
Preference number: 1 (lower is better)
Translates to: SILTCLPWPLPCLGG*TSLRCLQSRQLLSV
Trigger: GACACTTAGGAGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGGTAAGCACGTGAGGATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp CAGGAGCCTCGCCCTGTCCTGGCACACGTTGGCCCCAAGCAAACGTaGAGGTCCTCCAGAGGGACAAGGAGGCATCATGGGCATCTCCAC +
Preference number: 1 (lower is better)
Translates to: QEPRPVLAHVGPKQT*RSSRGTRRHHGHLH
Trigger: GTGGAGATGCCCATGATGCCTCCTTGTCCCTCTGGAGGACCTCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAGGGCGAGGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp AGGTCCTCCAGAGGGACAAGGAGGCATCATGGGCATCTCCACAGCTaGTGGCAGGATCCCGGGTGCCCTGTACCCCTTCGTCTGCTGCCT +
Preference number: 1 (lower is better)
Translates to: RSSRGTRRHHGHLHS*WQDPGCPVPLRLLP
Trigger: AGGCAGCAGACGAAGGGGTACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTTGTCCCTCTGGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp ATGACATCGTGTGTGGGGACCTATGGCAGGAGCCTCGCCCTGTCCTaGCACACGTTGGCCCCAAGCAAACGTGGAGGTCCTCCAGAGGGA +
Preference number: 1 (lower is better)
Translates to: MTSCVGTYGRSLALS*HTLAPSKRGGPPEG
Trigger: TCCCTCTGGAGGACCTCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAGGGCGAGGCTCCTGCCATAGGTCCCCACACACGATGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp TACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTaGGGAACAGCTTCGTTTCCTCGGACCTCCAGGAATCCTGCCCCT +
Preference number: 1 (lower is better)
Translates to: YPSFTHCVPLQSPCS*GTASFPRTSRNPAP
Trigger: AGGGGCAGGATTCCTGGAGGTCCGAGGAAACGAAGCTGTTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp ACAGCAGGGGGCACTCGGCCACCCTTTCCACTTTCTACCCAGCCCTaGACTTTTAAGATGAGGCCCTTTACGGAAGGAGGCCTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: TAGGTRPPFPLSTQP*TFKMRPFTEGGLGW
Trigger: CCAGCCCAGGCCTCCTTCCGTAAAGGGCCTCATCTTAAAAGTCCAGGGCTGGGTAGAAAGTGGAAAGGGTGGCCGAGTGCCCCCTGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp GGGAGATCGGCGTGTGAGTACGTATGCCTCACCCACGCTATCTTCTaGGCTCCAGCACCCACGGCATGTGGAGAATGGGCTGCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: GRSACEYVCLTHAIF*APAPTACGEWAALF
Trigger: AAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGGGTGAGGCATACGTACTCACACGCCGATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp GTAGGAGTTTGGTTTGCCCATCATCTCTGGGTCAGGCTGGACACTTaGCTGTCACACTTGGCCTTCTGGGGTGACTGCGTGAGTGTGGCC +
Preference number: 1 (lower is better)
Translates to: VGVWFAHHLWVRLDT*LSHLAFWGDCVSVA
Trigger: GGCCACACTCACGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAACCAAACTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp CAACCATTTAGGGAGAATGCCCAGATCTCTGTCGGGCAAGTTTGCTaGACCTGGTCCATCCTCACGTGCTTACCTTGGCCCCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: QPFRENAQISVGQVC*TWSILTCLPWPLPC
Trigger: GCAGGGCAGGGGCCAAGGTAAGCACGTGAGGATGGACCAGGTTCAGCAAACTTGCCCGACAGAGATCTGGGCATTCTCCCTAAATGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp GCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACCCCATGGTaGCCCAATGGTTGGTCTGCCCAACCATTTAGGGAGAATGCCCAG +
Preference number: 1 (lower is better)
Translates to: AHSAQCPAYLRLTPW*PNGWSAQPFRENAQ
Trigger: CTGGGCATTCTCCCTAAATGGTTGGGCAGACCAACCATTGGGTCACCATGGGGTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp CGCTATCTTCTGAGCTCCAGCACCCACGGCATGTGGAGAATGGGCTaGCTTGTTTGGGAGGCTTGGTTTACCCTACTCCGTCGAGAAGCA +
Preference number: 1 (lower is better)
Translates to: RYLLSSSTHGMWRMG*LVWEAWFTLLRREA
Trigger: TGCTTCTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAGAAGATAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp GAGCAGCCCTTGTCTGAGAAGCTGTACAGCTGGGTTTGCCCCTCCTaGCACCAGCAATGCGTGCTCCAAGGCAGACTCAAGTTTGTGGAA +
Preference number: 1 (lower is better)
Translates to: EQPLSEKLYSWVCPS*HQQCVLQGRLKFVE
Trigger: TTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAGCTTCTCAGACAAGGGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp GGCAGTGCACCTTCCAGGCCTTTCCAGGACACCTCAGTAGGAGTTTaGTTTGCCCATCATCTCTGGGTCAGGCTGGACACTTGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: GSAPSRPFQDTSVGV*FAHHLWVRLDTWLS
Trigger: TGACAGCCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAACCAAACTCCTACTGAGGTGTCCTGGAAAGGCCTGGAAGGTGCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp CTGAGCTCCAGCACCCACGGCATGTGGAGAATGGGCTGCCTTGTTTaGGAGGCTTGGTTTACCCTACTCCGTCGAGAAGCATGTAATGCG +
Preference number: 1 (lower is better)
Translates to: LSSSTHGMWRMGCLV*EAWFTLLRREACNA
Trigger: CGCATTACATGCTTCTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp ATGCCTCACCCACGCTATCTTCTGAGCTCCAGCACCCACGGCATGTaGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTC +
Preference number: 1 (lower is better)
Translates to: MPHPRYLLSSSTHGM*RMGCLVWEAWFTLL
Trigger: GAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGGGTGAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp ACGGAAGGAGGCCTGGGCTGGAGACTCAGCCTTGCTTCCCCTCACTaGTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAAT +
Preference number: 1 (lower is better)
Translates to: TEGGLGWRLSLASPH*WSGSTSYPGSSNEN
Trigger: ATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGCCCAGGCCTCCTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp AGAAGCTGTACAGCTGGGTTTGCCCCTCCTGCCACCAGCAATGCGTaGTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGA +
Preference number: 1 (lower is better)
Translates to: RSCTAGFAPPATSNA*SKADSSLWKTWSLG
Trigger: TCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp TCTGAGAAGCTGTACAGCTGGGTTTGCCCCTCCTGCCACCAGCAATaGGTGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCT +
Preference number: 1 (lower is better)
Translates to: SEKLYSWVCPSCHQQ*VLQGRLKFVEDLVS
Trigger: AGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAGCTTCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp GAAGGAGGCCTGGGCTGGAGACTCAGCCTTGCTTCCCCTCACTGCTaGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTG +
Preference number: 1 (lower is better)
Translates to: EGGLGWRLSLASPHC*SGSTSYPGSSNENV
Trigger: CACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGCCCAGGCCTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp TGCACCTTCCAGGCCTTTCCAGGACACCTCAGTAGGAGTTTGGTTTaGCCATCATCTCTGGGTCAGGCTGGACACTTGGCTGTCACACTT +
Preference number: 1 (lower is better)
Translates to: CTFQAFPGHLSRSLV*PSSLGQAGHLAVTL
Trigger: AAGTGTGACAGCCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAACCAAACTCCTACTGAGGTGTCCTGGAAAGGCCTGGAAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp CAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTaGGTTGTGGCCCCTCTTGGTAGTTTAATCAGCTGTTCTTTGGGT +
Preference number: 1 (lower is better)
Translates to: QMRADSWVCPFPAEG*VVAPLGSLISCSLG
Trigger: ACCCAAAGAACAGCTGATTAAACTACCAAGAGGGGCCACAACCCACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp CCTCCTGCCACCAGCAATGCGTGCTCCAAGGCAGACTCAAGTTTGTaGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAA +
Preference number: 1 (lower is better)
Translates to: PPATSNACSKADSSL*KTWSLGGKTDQMPQ
Trigger: TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 90 bp AGCTTTGCAGCAGATCTGGAGGATCGTCCCTTTGCTGTACCCCAGTaGGTAAGAATTCTTGTCTTTTGCCAACCCATTGAGCCGGCATTG +
Preference number: 1 (lower is better)
Translates to: SFAADLEDRPFAVPQ*VRILVFCQPIEPAL
Trigger: CAATGCCGGCTCAATGGGTTGGCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAGATCTGCTGCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp GCATTTGCTACATGCTTAGGCCGAGAGGCAGCGTGGCTGGTATTGTaGGCTGTCAGCTTTAAGTTTACAGCATTGAAACTGAGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: AFATCLGREAAWLVL*AVSFKFTALKLSLG
Trigger: TCCCAAGCTCAGTTTCAATGCTGTAAACTTAAAGCTGACAGCTCACAATACCAGCCACGCTGCCTCTCGGCCTAAGCATGTAGCAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 90 bp CTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTGCGACCATTTaGGCACCCATGTCTGCTTTAGGCAGGTGGAGTGACGCAATAGTT +
Preference number: 1 (lower is better)
Translates to: LCRYLTLQQRSFATI*APMSALGRWSDAIV
Trigger: AACTATTGCGTCACTCCACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp CTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGAGTaGCGCAATAGTTACGGGCAATGGAATGTAATAAAAAGAGCAGAG +
Preference number: 1 (lower is better)
Translates to: LCDHLRTHVCFRQVE*RNSYGQWNVIKRAE
Trigger: CTCTGCTCTTTTTATTACATTCCATTGCCCGTAACTATTGCGTCACTCCACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 90 bp ACTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATaGCCTGGGAATAAAGTTGGCCAAGAAGCCTCCGAGGGGAGATCG +
Preference number: 1 (lower is better)
Translates to: TVFHFDFDSSRSSAR*PGNKVGQEASEGRS
Trigger: CGATCTCCCCTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp CTTACCTTGGCCCCTGCCCTGCCTGGGTGGCTGGACTTCCCTGCGTaGCCTGCAGTCCAGGCAGCTCCTAAGTGTCCACCCAGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LTLAPALPGWLDFPA*PAVQAAPKCPPSSG
Trigger: CCCACTGCTGGGTGGACACTTAGGAGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGGTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAATCTGGGGTGACTGCGTaGGTGTGGCCCCCTCGTCAG +
Preference number: 2 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESGVTA*VWPPRQ
Trigger: CTGACGAGGGGGCCACACTCACGCAGTCACCCCAGA...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp TGTCGGGCAAGTTTGCTGAACCTGGTCCATCCTCACGTGCTTACCTaGGCCCCTGCCCTGCCTGGGTGGCTGGACTTCCCTGCGTTGCCT +
Preference number: 2 (lower is better)
Translates to: CRASLLNLVHPHVLT*APALPGWLDFPALP
Trigger: AGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGGTAAGCACGTGAGGATGGACCAGGTTCAGCAAACTTGCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACATTCAGCAGACCCACTaGGCAGTGCACCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHIQQTH*AVHLPG
Trigger: GCCTGGAAGGTGCACTGCCCAGTGGGTCTGCTGAAT...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAGGGGAGATCGGCGTGTaGGTACGTATGCCTCACCCA +
Preference number: 2 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEGEIGV*VRMPHP
Trigger: TGGGTGAGGCATACGTACTCACACGCCGATCTCCCC...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTTGGACTTCCCTGCGTTaGCTGCAGTCCAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: KEASWASPQLMAGSRVPCWTSLR*LQSRQL
Trigger: GAGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCA...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCCCTGCCTGGGTGGCTaGACTTCCCTGCGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAPCLGG*TSLRCL
Trigger: CAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGGCCCCTGCCCTGCCTaGGTGGCTGGACTTCCCTGC +
Preference number: 2 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEGPCPA*VAGLPC
Trigger: GCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGATCTCTGGGTCAGGCTaGACACTTGGCTGTCACACT +
Preference number: 2 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLISGSG*TLGCHT
Trigger: AGTGTGACAGCCAAGTGTCCAGCCTGACCCAGAGAT...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGGCTCTAGAATCGGCTaGCCTGGGCACTGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCGSRIG*PGHCLS
Trigger: GCTCAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACTTGGCCTTCTGGGGTaGCTGCGTGAGTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSLGLLG*LRECGP
Trigger: GGGGCCACACTCACGCAGTCACCCCAGAAGGCCAAG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCACCCACGCTATCTTCTaGGCTCCAGCACCCACGGCA +
Preference number: 2 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCTHAIF*APAPTA
Trigger: TGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGGGT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACGGCAGTGAGAGCATTTaGTACATGCTTAGGCCGAGA +
Preference number: 2 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHGSESI*YMLRPR
Trigger: TCTCGGCCTAAGCATGTAGCAAATGCTCTCACTGCC...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTACGGCATGTGGAGAATaGGCTGCCTTGTTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: KEASWASPQLMAGSRVPCTACGE*AALFGR
Trigger: CCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGT...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGCCTTGGCCCCTGCCCTaGCTGGGTGGCTGGACTTCC +
Preference number: 2 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLPWPLP*LGGWTS
Trigger: GGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGG...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCTGGAGACTCAGCCTTaGTTCCCCTCACTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GRREMVGVSSPCLRSCTALETQP*FPSLLE
Trigger: CTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGTTTGCCCATCATCTCTaGGTCAGGCTGGACACTTGG +
Preference number: 2 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWFAHHL*VRLDTW
Trigger: CCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAA...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACACCACAGCCTCCAGTaGAAGCATTCCAAGATCTGC +
Preference number: 2 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEHHSLQ*KHSKIC
Trigger: GCAGATCTTGGAATGCTTCCACTGGAGGCTGTGGTG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTAGACCCACTGGGCAGTaGACCTTCCAGGCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTRPTGQ*TFQAFP
Trigger: TGGAAAGGCCTGGAAGGTGCACTGCCCAGTGGGTCT...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCCTTGCTTCCCCTCACTaGTGGAGTGGCTCCACTTCA +
Preference number: 2 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCLASPH*WSGSTS
Trigger: TGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAG...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGATTCCGGACCCTTCCTaGGTGTTCTCCATGATACTG +
Preference number: 2 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWIPDPS*VFSMIL
Trigger: CAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTTCACACTTGGCCTTCTaGGGTGACTGCGTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: GRREMVGVSSPCLRSCTASHLAF*GDCVSV
Trigger: CACACTCACGCAGTCACCCCAGAAGGCCAAGTGTGA...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp CCCTTGGGCAAAGGAAGTGGATTTGGCCCAGCAAGGATACCATTCTaGGGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGA +
Preference number: 2 (lower is better)
Translates to: PLGKGSGFGPARIPF*GRREMVGVSSPCLR
Trigger: TCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACCCAAGAATGGTATCCTTGCTGGGCCAAATCCACTTCCTTTGCCCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGAGCAAGATCTGGGACTaGAAACGGCGATTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLSKIWD*KRRLFK
Trigger: TTTAAACAATCGCCGTTTTCAGTCCCAGATCTTGCT...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGCAGGGCCCACTTTCTaGGCAGTCCCACCTGAAGCC +
Preference number: 2 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLAGPTF*AVPPEA
Trigger: GGCTTCAGGTGGGACTGCTCAGAAAGTGGGCCCTGC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAAGTAGGAGTTTGGTTTaGCCATCATCTCTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESRSLV*PSSLGQ
Trigger: CTGACCCAGAGATGATGGGCAAACCAAACTCCTACT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCTTGGCTGTCACACTTaGCCTTCTGGGGTGACTGCG +
Preference number: 2 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFLGCHT*PSGVTA
Trigger: CGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGATGGGCTGCCTTGTTTaGGAGGCTTGGTTTACCCTA +
Preference number: 2 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLMGCLV*EAWFTL
Trigger: TAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCAT...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCTGCCTGCAATATGGTaGGTGGGCACTTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFLPAIW*VGTSCC
Trigger: GCAGCAGGAAGTGCCCACCCACCATATTGCAGGCAG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAACAACAAAGAAGCTTTaGGACCATTTGCGCACCCAT +
Preference number: 2 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGETTKKL*DHLRTH
Trigger: ATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTAGAGCATTTGCTACATaGTTAGGCCGAGAGGCAGCG +
Preference number: 2 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTRAFAT*LGREAA
Trigger: CGCTGCCTCTCGGCCTAAGCATGTAGCAAATGCTCT...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACATGTGGAGAATGGGCTaGCTTGTTTGGGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHMWRMG*LVWEAW
Trigger: CCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACAT...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGGAGGATCGTCCCTTTaGTGTACCCCAGTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEGGSSL*CTPVGK
Trigger: CTTACCCACTGGGGTACAGCAAAGGGACGATCCTCC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCGCTCACTCAGCTCAGTaGCCAGCTTACCTAAGGCTC +
Preference number: 2 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFAHSAQ*PAYLRL
Trigger: GAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGC...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCAGTCAGGCTGGACACTTaGCTGTCACACTTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSVRLDT*LSHLAF
Trigger: GAAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGAC...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTCTGCTTTAGGCAGGTaGAGTGACGCAATAGTTACG +
Preference number: 2 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLSALGR*SDAIVT
Trigger: CGTAACTATTGCGTCACTCCACCTGCCTAAAGCAGA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCAGCTTTGCGACCATTTaGGCACCCATGTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCSFATI*APMSAL
Trigger: TAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGTCAGCCTTCTCATTTTaGGAGCCATGCACTTCTAAA +
Preference number: 2 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWSAFSF*EPCTSK
Trigger: TTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTGA...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGCTTTGCAGCAGATCTaGAGGATCGTCCCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEALQQI*RIVPLL
Trigger: CAGCAAAGGGACGATCCTCCAGATCTGCTGCAAAGC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCAGCTTCCCCTCACTGCTaGAGTGGCTCCACTTCATAT +
Preference number: 2 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSASPHC*SGSTSY
Trigger: ATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTTCATATGCGCAAAACTaGAGAATGCTATGTGCTTCA +
Preference number: 2 (lower is better)
Translates to: KEASWASPQLMAGSRVPCSYAQN*RMLCAS
Trigger: TGAAGCACATAGCATTCTTCAGTTTTGCGCATATGA...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAACCTGGACTTTTAAGATaGGGCCCTTTACGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEPGLLR*GPLRKE
Trigger: CTCCTTCCGTAAAGGGCCTCATCTTAAAAGTCCAGG...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp ATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTaGGCCAAGAAGCCTCCGAGGGGAGATCGGCGTGTGAGTACGTAT +
Preference number: 2 (lower is better)
Translates to: ISTPAEVLQDDLGIK*AKKPPRGDRRVSTY
Trigger: ATACGTACTCACACGCCGATCTCCCCTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACGTTGTGAGGCTTAAGTaGTCTCAAGGAATGAACCCA +
Preference number: 2 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHVVRLK*SQGMNP
Trigger: TGGGTTCATTCCTTGAGATCACTTAAGCCTCACAAC...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACAGTTTAACAAGTTTTTaGGCCCACAGTCCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHSLTSF*AHSPSK
Trigger: CTTGCTGGGACTGTGGGCTCAAAAACTTGTTAAACT...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGTTCTTTGGGTGCCTTTaGATAATAATTGGACAAGTC +
Preference number: 2 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWFFGCL*IIIGQV
Trigger: GACTTGTCCAATTATTATTCAAAGGCACCCAAAGAA...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAACCATTGAGCCGGCATTaGATCACTCAATTACTGCAA +
Preference number: 2 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEPLSRH*ITQLLQ
Trigger: TTGCAGTAATTGAGTGATTCAATGCCGGCTCAATGG...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGCGTGTGAGTACGTATaGCTCACCCACGCTATCTTC +
Preference number: 2 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPACEYV*LTHAIF
Trigger: GAAGATAGCGTGGGTGAGGCATACGTACTCACACGC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTTTTGCTGTACCCCAGTaGGTAAGAATTCTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAFAVPQ*VRILVF
Trigger: AAAGACAAGAATTCTTACCCACTGGGGTACAGCAAA...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTaGGGTTCCACCCCTCATGGT +
Preference number: 2 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNENVYNS*GSTPHG
Trigger: ACCATGAGGGGTGGAACCCCAGGAATTATACACATT...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTTACTGGGCAACACAATaGTGTCACCAGCTCACTGTC +
Preference number: 2 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTYWATQ*CHQLTV
Trigger: GACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp TTTGAGCTAAGTCTGGTAGTTGGTATGGTAGCCAAAAACACATCTTaGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCACCTTTG +
Preference number: 2 (lower is better)
Translates to: FELSLVVGMVAKNTS*TRLLLCRLSTASPL
Trigger: CAAAGGTGAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCTACCATACCAACTACCAGACTTAGCTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGTTCTGGTTAACCTTTaGACCCCAAGGCAGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCVLVNL*TPRQSK
Trigger: CTTGCTCTGCCTTGGGGTTCAAAGGTTAACCAGAAC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAGAAGTTCTGCAAGATaGCCTGGGAATAAAGTTGGC +
Preference number: 2 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDRSSAR*PGNKVG
Trigger: GCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTAATTCACATGTAATTTaGGCTAAGTCTGGTAGTTGG +
Preference number: 2 (lower is better)
Translates to: GRREMVGVSSPCLRSCTANSHVI*AKSGSW
Trigger: CCAACTACCAGACTTAGCTCAAATTACATGTGAATT...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGACCTCAGTAGGAGTTTaGTTTGCCCATCATCTCTGG +
Preference number: 2 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLTSVGV*FAHHLW
Trigger: CCAGAGATGATGGGCAAACCAAACTCCTACTGAGGT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAGAGAGGCAGCGTGGCTaGTATTGTGAGCTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGERQRG*YCELSA
Trigger: AGCTGACAGCTCACAATACCAGCCACGCTGCCTCTC...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTAACTGTTTTTCACTTTaGTTTCGACTCCAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTNCFSL*FRLQQK
Trigger: CTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTT...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGCGCAAAACTGAAGAATaGTATGTGCTTCATTCACTG +
Preference number: 2 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVRKTEE*YVLHSL
Trigger: CAGTGAATGAAGCACATAGCATTCTTCAGTTTTGCG...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCATTAAGGCCAGCACTTaGAGCATTAAATACTGTCAT +
Preference number: 2 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCIKAST*SIKYCH
Trigger: ATGACAGTATTTAATGCTTCAAGTGCTGGCCTTAAT...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR TCA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAAGTGATCTCAAGGAATaGACCCAGTTAAAACCCTAT +
Preference number: 2 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQSDLKE*TQLKPY
Trigger: ATAGGGTTTTAACTGGGTTCATTCCTTGAGATCACT...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp CCTCCAGTGGAAGCATTCCAAGATCTGCAGCAAATATCTAGCTCATaGGCAGAAGCAGGTTTTTGGCATGAACAACTGTTTTTCACTTTG +
Preference number: 2 (lower is better)
Translates to: PPVEAFQDLQQISSS*AEAGFWHEQLFFTL
Trigger: CAAAGTGAAAAACAGTTGTTCATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAATGCTTCCACTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTCACCAGACTCATCTGTaGAAAATTTTGCTCTATTCT +
Preference number: 2 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCHQTHL*KILLYS
Trigger: AGAATAGAGCAAAATTTTGCACAGATGAGTCTGGTG...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 90 bp TCATTGGCAGAAGCAGGTTTTTGGCATGAACAACTGTTTTTCACTTaGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATA +
Preference number: 2 (lower is better)
Translates to: SLAEAGFWHEQLFFT*ISTPAEVLQDDLGI
Trigger: TATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTTGTTCATGCCAAAAACCTGCTTCTGCCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATACTTTGTCAATGCTGTaGCGCTACTTAACCTTACAA +
Preference number: 2 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHTLSML*RYLTLQ
Trigger: TTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp GGCAGGATCCCGGGTGCCCTGTACCCCTTCGTCTGCTaGCTGCAATATGGTGGGTGGGCACTTCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: GRIPGALYPFVC*LQYGGWALPAA
Trigger: AGCAGCAGGAAGTGCCCACCCACCATATTGCAGGCAGCAGACGAAGGGGTACAGGGCACCCGGGATCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp CGCCCTGTCCTGGCACACGTTGGCCCCAAGCAAACGTaGAGGTCCTCCAGAGGGACAAGGAGGCATCATGGG +
Preference number: 3 (lower is better)
Translates to: RPVLAHVGPKQT*RSSRGTRRHHG
Trigger: CCCATGATGCCTCCTTGTCCCTCTGGAGGACCTCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp TGTGTGGGGACCTATGGCAGGAGCCTCGCCCTGTCCTaGCACACGTTGGCCCCAAGCAAACGTGGAGGTCCT +
Preference number: 3 (lower is better)
Translates to: CVGTYGRSLALS*HTLAPSKRGGP
Trigger: AGGACCTCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAGGGCGAGGCTCCTGCCATAGGTCCCCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp GATGGCAGGATCCCGGGTGCCCTGTACCCCTTCGTCTaGTGCCTGCAATATGGTGGGTGGGCACTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: DGRIPGALYPFV*CLQYGGWALPA
Trigger: AGCAGGAAGTGCCCACCCACCATATTGCAGGCAGCAGACGAAGGGGTACAGGGCACCCGGGATCCTGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTGCTGGAGACTCAGCCTaGCTTCCCCTCACTGCTGGA +
Preference number: 3 (lower is better)
Translates to: KEASWASPQLMAGSRVPCAGDSA*LPLTAG
Trigger: TCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGC...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp AGAGGGACAAGGAGGCATCATGGGCATCTCCACAGCTaGTGGCAGGATCCCGGGTGCCCTGTACCCCTTCGT +
Preference number: 3 (lower is better)
Translates to: RGTRRHHGHLHS*WQDPGCPVPLR
Trigger: ACGAAGGGGTACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTTGTCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp GGCCTGGGCTGGAGACTCAGCCTTGCTTCCCCTCACTaGTGGAGTGGCTCCACTTCATATCCCGGTTCCAGT +
Preference number: 3 (lower is better)
Translates to: GLGWRLSLASPH*WSGSTSYPGSS
Trigger: ACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp TGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTaGTGGCAGCTGGGGGCTTTTATGACATCGTGTGTG +
Preference number: 3 (lower is better)
Translates to: WCHQLTVPAAWV*WQLGAFMTSCV
Trigger: CACACACGATGTCATAAAAGCCCCCAGCTGCCACCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp GCGTGTGAGTACGTATGCCTCACCCACGCTATCTTCTaGGCTCCAGCACCCACGGCATGTGGAGAATGGGCT +
Preference number: 3 (lower is better)
Translates to: ACEYVCLTHAIF*APAPTACGEWA
Trigger: AGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGGGTGAGGCATACGTACTCACACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp AGTTGGCCAAGAAGCCTCCGAGGGGAGATCGGCGTGTaGGTACGTATGCCTCACCCACGCTATCTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: SWPRSLRGEIGV*VRMPHPRYLLS
Trigger: GCTCAGAAGATAGCGTGGGTGAGGCATACGTACTCACACGCCGATCTCCCCTCGGAGGCTTCTTGGCCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp CTGAGCTCCAGCACCCACGGCATGTGGAGAATGGGCTaGCTTGTTTGGGAGGCTTGGTTTACCCTACTCCGT +
Preference number: 3 (lower is better)
Translates to: LSSSTHGMWRMG*LVWEAWFTLLR
Trigger: ACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp ACAGCTGGGTTTGCCCCTCCTGCCACCAGCAATGCGTaGTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGG +
Preference number: 3 (lower is better)
Translates to: TAGFAPPATSNA*SKADSSLWKTW
Trigger: CCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp TGGTTTGCCCATCATCTCTGGGTCAGGCTGGACACTTaGCTGTCACACTTGGCCTTCTGGGGTGACTGCGTG +
Preference number: 3 (lower is better)
Translates to: WFAHHLWVRLDT*LSHLAFWGDCV
Trigger: CACGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTCTCTCAATAGGGACTTaGTCAATGCTGTGCCGCTAC +
Preference number: 3 (lower is better)
Translates to: KEASWASPQLMAGSRVPCLSIGT*SMLCRY
Trigger: GTAGCGGCACAGCATTGACAAAGTCCCTATTGAGAG...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGACCTGGGAATAAAGTaGGCCAAGAAGCCTCCGAGG +
Preference number: 3 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCDLGIK*AKKPPR
Trigger: CCTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCCAGCAAGAATGGGTTaGAGGTCTATAATTACCCCA +
Preference number: 3 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLPARMG*RSIITP
Trigger: TGGGGTAATTATAGACCTCAAACCCATTCTTGCTGG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCAGCAGTGGGTGTGGCTaGGCTCTAGAATCGGCTGGC +
Preference number: 3 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFSSGCG*ALESAG
Trigger: GCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCT...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp GCTCAGTGCCCAGCTTACCTAAGGCTCACCCCATGGTaGCCCAATGGTTGGTCTGCCCAACCATTTAGGGAG +
Preference number: 3 (lower is better)
Translates to: AQCPAYLRLTPW*PNGWSAQPFRE
Trigger: CTCCCTAAATGGTTGGGCAGACCAACCATTGGGTCACCATGGGGTGAGCCTTAGGTAAGCTGGGCACTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp CTGTACAGCTGGGTTTGCCCCTCCTGCCACCAGCAATaGGTGCTCCAAGGCAGACTCAAGTTTGTGGAAGAC +
Preference number: 3 (lower is better)
Translates to: LYSWVCPSCHQQ*VLQGRLKFVED
Trigger: GTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp TTGTCTGAGAAGCTGTACAGCTGGGTTTGCCCCTCCTaGCACCAGCAATGCGTGCTCCAAGGCAGACTCAAG +
Preference number: 3 (lower is better)
Translates to: LSEKLYSWVCPS*HQQCVLQGRLK
Trigger: CTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAGCTTCTCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp AGCACCCACGGCATGTGGAGAATGGGCTGCCTTGTTTaGGAGGCTTGGTTTACCCTACTCCGTCGAGAAGCA +
Preference number: 3 (lower is better)
Translates to: STHGMWRMGCLV*EAWFTLLRREA
Trigger: TGCTTCTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp CCACGCTATCTTCTGAGCTCCAGCACCCACGGCATGTaGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTT +
Preference number: 3 (lower is better)
Translates to: PRYLLSSSTHGM*RMGCLVWEAWF
Trigger: AAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp GCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTaGGTTGTGGCCCCTCTTGGTAGTTTAATCAGCTGT +
Preference number: 3 (lower is better)
Translates to: ADSWVCPFPAEG*VVAPLGSLISC
Trigger: ACAGCTGATTAAACTACCAAGAGGGGCCACAACCCACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp CTGGGCTGGAGACTCAGCCTTGCTTCCCCTCACTGCTaGAGTGGCTCCACTTCATATCCCGGTTCCAGTAAT +
Preference number: 3 (lower is better)
Translates to: LGWRLSLASPHC*SGSTSYPGSSN
Trigger: ATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp GGCACTCGGCCACCCTTTCCACTTTCTACCCAGCCCTaGACTTTTAAGATGAGGCCCTTTACGGAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: GTRPPFPLSTQP*TFKMRPFTEGG
Trigger: GCCTCCTTCCGTAAAGGGCCTCATCTTAAAAGTCCAGGGCTGGGTAGAAAGTGGAAAGGGTGGCCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCCTTCAGCCAGACACTaGAGGGGGCCTCTCCCCACA +
Preference number: 3 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCPSARH*RGPLPT
Trigger: TGTGGGGAGAGGCCCCCTCAAGTGTCTGGCTGAAGG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp CCTTTCCACTTTCTACCCAGCCCTGGACTTTTAAGATaGGGCCCTTTACGGAAGGAGGCCTGGGCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: PFHFLPSPGLLR*GPLRKEAWAGD
Trigger: GTCTCCAGCCCAGGCCTCCTTCCGTAAAGGGCCTCATCTTAAAAGTCCAGGGCTGGGTAGAAAGTGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp CCTTCCAGGCCTTTCCAGGACACCTCAGTAGGAGTTTaGTTTGCCCATCATCTCTGGGTCAGGCTGGACACT +
Preference number: 3 (lower is better)
Translates to: PSRPFQDTSVGV*FAHHLWVRLDT
Trigger: AGTGTCCAGCCTGACCCAGAGATGATGGGCAAACCAAACTCCTACTGAGGTGTCCTGGAAAGGCCTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp CCCTCCCCATCTTCCCTGGAGTGGGGGAAGCTGACTTaGAATTCCAGTAGCCTAAGGTTACTGGGCAACACA +
Preference number: 3 (lower is better)
Translates to: PSPSSLEWGKLT*NSSSLRLLGNT
Trigger: TGTGTTGCCCAGTAACCTTAGGCTACTGGAATTCCAAGTCAGCTTCCCCCACTCCAGGGAAGATGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCCCATTGAGCCGGCATaGAATCACTCAATTACTGCA +
Preference number: 3 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLPIEPA*NHSITA
Trigger: TGCAGTAATTGAGTGATTCAATGCCGGCTCAATGGG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAACTCTGTCGGGCAAGTTaGCTGAACCTGGTCCATCCT +
Preference number: 3 (lower is better)
Translates to: IPDPSCVFSMILTPSVVELCRAS*LNLVHP
Trigger: AGGATGGACCAGGTTCAGCAAACTTGCCCGACAGAG...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp TCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTaGGTGTTCTCCATGATACTGACCCCTTCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SRKAPLFIPDPS*VFSMILTPSVV
Trigger: CACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp GGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTaGTTTACCCTACTCCGTCGAGAAGCATGTAATGCG +
Preference number: 3 (lower is better)
Translates to: GMWRMGCLVWEA*FTLLRREACNA
Trigger: CGCATTACATGCTTCTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGGTCAGGCTGGACACTaGGCTGTCACACTTGGCCTT +
Preference number: 3 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVGQAGH*AVTLGL
Trigger: AAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGACC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAACTGTCCTGGCACACGTaGGCCCCAAGCAAACGTGGA +
Preference number: 3 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQLSWHT*APSKRG
Trigger: TCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAG...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGCATTGAAACTGAGCTaGGGAAGGAGGAGAGGACAG +
Preference number: 3 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTALKLS*GRRRGQ
Trigger: CTGTCCTCTCCTCCTTCCCAAGCTCAGTTTCAATGC...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGAATGGGCTGCCTTGTTaGGGAGGCTTGGTTTACCCT +
Preference number: 3 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLNGLPC*GGLVYP
Trigger: AGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGGAGAATGGGCTGCCTaGTTTGGGAGGCTTGGTTTA +
Preference number: 3 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCGEWAA*FGRLGL
Trigger: TAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACAGTTTAACAAGTTTTaGAGCCCACAGTCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSQFNKF*SPQSQQ
Trigger: TTGCTGGGACTGTGGGCTCAAAAACTTGTTAAACTG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp GCAGATCTGGAGGATCGTCCCTTTGCTGTACCCCAGTaGGTAAGAATTCTTGTCTTTTGCCAACCCATTGAG +
Preference number: 3 (lower is better)
Translates to: ADLEDRPFAVPQ*VRILVFCQPIE
Trigger: CTCAATGGGTTGGCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAGATCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACTTTAAGTTTACAGCATaGAAACTGAGCTTGGGAAGG +
Preference number: 3 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHFKFTA*KLSLGR
Trigger: CCTTCCCAAGCTCAGTTTCAATGCTGTAAACTTAAA...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGTTCTTTGGGTGCCTTaGAATAATAATTGGACAAGT +
Preference number: 3 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCVLWVP*NNNWTS
Trigger: ACTTGTCCAATTATTATTCAAAGGCACCCAAAGAAC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp ACATGCTTAGGCCGAGAGGCAGCGTGGCTGGTATTGTaGGCTGTCAGCTTTAAGTTTACAGCATTGAAACTG +
Preference number: 3 (lower is better)
Translates to: TCLGREAAWLVL*AVSFKFTALKL
Trigger: CAGTTTCAATGCTGTAAACTTAAAGCTGACAGCTCACAATACCAGCCACGCTGCCTCTCGGCCTAAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp CACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATaGCCTGGGAATAAAGTTGGCCAAGAAGCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: HFDFDSSRSSAR*PGNKVGQEASE
Trigger: CTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCCTTGTTTGGGAGGCTaGGTTTACCCTACTCCGTCG +
Preference number: 3 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTPCLGG*VYPTPS
Trigger: CGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR GCA 72 bp TACTTAACCTTACAACAAAGAAGCTTTGCGACCATTTaGGCACCCATGTCTGCTTTAGGCAGGTGGAGTGAC +
Preference number: 3 (lower is better)
Translates to: YLTLQQRSFATI*APMSALGRWSD
Trigger: GTCACTCCACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGTAAGGTTAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGATACAACAAAGAAGCTTaGCGACCATTTGCGCACCCA +
Preference number: 3 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGYNKEA*RPFAHP
Trigger: TGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGTA...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCAACTGTTTTTCACTTaGATTTCGACTCCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCQLFFT*ISTPAE
Trigger: TTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTTG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp CATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGAGTaGCGCAATAGTTACGGGCAATGGAATGTAATAAAA +
Preference number: 3 (lower is better)
Translates to: HLRTHVCFRQVE*RNSYGQWNVIK
Trigger: TTTTATTACATTCCATTGCCCGTAACTATTGCGTCACTCCACCTGCCTAAAGCAGACATGGGTGCGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR-3UTR CAA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGCATCTGTGCAAAATTTaGCTCTATTCTCTTCTTAGC +
Preference number: 3 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVHLCKI*LYSLLS
Trigger: GCTAAGAAGAGAATAGAGCAAAATTTTGCACAGATG...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp CCAGTGGGTAAGAATTCTTGTCTTTTGCCAACCCATTaGGCCGGCATTGAATCACTCAATTACTGCAAAATC +
Preference number: 3 (lower is better)
Translates to: PVGKNSCLLPTH*AGIESLNYCKI
Trigger: GATTTTGCAGTAATTGAGTGATTCAATGCCGGCTCAATGGGTTGGCAAAAGACAAGAATTCTTACCCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR TCA 72 bp ATGCTATGTGCTTCATTCACTGTTGTGAGGCTTAAGTaGTCTCAAGGAATGAACCCAGTTAAAACCCTATCA +
Preference number: 3 (lower is better)
Translates to: MLCASFTVVRLK*SQGMNPVKTLS
Trigger: TGATAGGGTTTTAACTGGGTTCATTCCTTGAGATCACTTAAGCCTCACAACAGTGAATGAAGCACATAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CCA 72 bp AAGCATTCCAAGATCTGCAGCAAATATCTAGCTCATTaGCAGAAGCAGGTTTTTGGCATGAACAACTGTTTT +
Preference number: 3 (lower is better)
Translates to: KHSKICSKYLAH*QKQVFGMNNCF
Trigger: AAAACAGTTGTTCATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp GCCCCTGCCCTGCCTGGGTGGCTGGACTTCCCTGCGTaGCCTGCAGTCCAGGCAGCTCCTAAGTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: APALPGWLDFPA*PAVQAAPKCPP
Trigger: GGGTGGACACTTAGGAGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTCCAAGGTGGGAGGCTaGGGTCGGCCACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHSKVGG*GRPPGW
Trigger: CCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGA...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAGGAGGGCCGGAGTGGTaGCAGGCGATGGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEGGPEW*QAMAFR
Trigger: CCGGAAGGCCATCGCCTGGCACCACTCCGGCCCTCC...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCAGGACACCTCCTCTTaGTGGGGCTGCGCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLQDTSS*WGCASG
Trigger: GCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAAGGGCCCCCAGCCTCTaGCGGCAGCGATGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGERAPSL*RQRWWG
Trigger: ACCCCACCATCGCTGCCGCCAGAGGCTGGGGGCCCT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGGAGATGCACGCCTGGTaGCGCCCTGCAGTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWEMHAW*RPAVQG
Trigger: CCCCTGAACTGCAGGGCGGCACCAGGCGTGCATCTC...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGTGGTCCATCCTCACGTaGTTACCTTGGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLWSILT*LPWPLP
Trigger: GGGCAGGGGCCAAGGTAAGCACGTGAGGATGGACCA...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCCCTGCAGGTGCCATTaGGCCACACGGCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLPCRCH*ATRRLL
Trigger: GAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGAGCCTCTCCCGGCCCTaGCTCCTGGGTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWSLSRP*LLGFLG
Trigger: CCCAAGGAAACCCAGGAGCCAGGGCCGGGAGAGGCT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCTCTGGCGGCAGCGATaGTGGGGTCAGTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLLWRQR*WGQWVG
Trigger: GCCCACCCACTGACCCCACCATCGCTGCCGCCAGAG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTGACACCTCCTCTTGCTaGGGCTGCGCCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCDTSSC*GCASGW
Trigger: CCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTC...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGACCCTTCGCAGCTCCTaGAAGGTGGGGTCCTCCACG +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWTLRSS*KVGSST
Trigger: CGTGGAGGACCCCACCTTTCAGGAGCTGCGAAGGGT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAGAGGGCACACAGAGCTaGTCTCCGCTGCGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEEGTQS*SPLRVC
Trigger: GCAGACTCGCAGCGGAGAGCAGCTCTGTGTGCCCTC...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAATCCTCAGACCAGTCCTaGTGCCCACAGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESSDQS*CPQGTG
Trigger: CCCTGTGCCCTGTGGGCACCAGGACTGGTCTGAGGA...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGGCAGCTCCTGAAAGGTaGGGTCCTCCACGTGACTCT +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLAAPER*GPPRDS
Trigger: AGAGTCACGTGGAGGACCCCACCTTTCAGGAGCTGC...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCCCATGTTCTCCTGGTaGGGCCAGCCTCTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAPMFSW*GQPLPA
Trigger: GGCCGGGAGAGGCTGGCCCCACCAGGAGAACATGGG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTGGCGGTGCTCTTGCTaGGCAGCAAGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLWRCSC*AASPGG
Trigger: GCCCCCTGGACTTGCTGCCCAGCAAGAGCACCGCCA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCCTGTTTTGTCCAGATaGAGGGCCGGAGTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLPVLSR*RAGVVP
Trigger: TGGCACCACTCCGGCCCTCCATCTGGACAAAACAGG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTGGCTCACAGGTGGGCTaGGGGGCGTCTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGGSQVG*GASAQQ
Trigger: CTGCTGTGCAGACGCCCCCCAGCCCACCTGTGAGCC...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGGGGAGATGCACGCCTaGTGCCGCCCTGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLGEMHA*CRPAVQ
Trigger: CTGAACTGCAGGGCGGCACCAGGCGTGCATCTCCCC...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGAGCCTCGCCCTGTCCTaGCACACGTTGGCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLSLALS*HTLAPS
Trigger: GCTTGGGGCCAACGTGTGCCAGGACAGGGCGAGGCT...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTCTGGGGTGACTGCGTaGGTGTGGCCCCCTCGTCAG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGSGVTA*VWPPRQ
Trigger: CTGACGAGGGGGCCACACTCACGCAGTCACCCCAGA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTACCCACGCTATCTTCTaGGCTCCAGCACCCACGGCA +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCTHAIF*APAPTA
Trigger: TGCCGTGGGTGCTGGAGCTCAGAAGATAGCGTGGGT...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAAGGCTCACCCCATGGTaGCCCAATGGTTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGERLTPW*PNGWSA
Trigger: GGCAGACCAACCATTGGGTCACCATGGGGTGAGCCT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAATTTGCTCCTGGCTCTaGCCCTGCCCTTTGGCACCC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEICSWL*PCPLAP
Trigger: GGGTGCCAAAGGGCAGGGGCAGAGCCAGGAGCAAAT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACCTGAGGCAGGGACTTaGCCCAGCGTCCTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEPEAGT*PSVLRV
Trigger: GACTCTAAGGACGCTGGGGCAAGTCCCTGCCTCAGG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTGAACTCTGGGGGAGATaGACGCCTGGTGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGELWGR*TPGAAL
Trigger: CAGGGCGGCACCAGGCGTGCATCTCCCCCAGAGTTC...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAAGTGGAGGTAGCTGCTaGAGCCCTCCAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESGGSC*SPPGSC
Trigger: GCAGCTTCCTGGAGGGCTCCAGCAGCTACCTCCACT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGATCATTTCCTGGGCCTaGAGGCTCCTAAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLIISWA*RLLSLL
Trigger: CAGGAGGCTTAGGAGCCTCCAGGCCCAGGAAATGAT...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGGCTCTAGAATCGGCTaGCCTGGGCACTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLGSRIG*PGHCLS
Trigger: GCTCAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCC...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCTGGGGACCTTGCACTaGGCAGGTGCACTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTLGTLH*AGALSG
Trigger: CCCCGAGAGTGCACCTGCTCAGTGCAAGGTCCCCAG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACAGTGGGTGGGCTGTTaGGAGTGGCGGTTTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEQWVGC*EWRFSF
Trigger: GAAGCTAAACCGCCACTCTCAACAGCCCACCCACTG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGCAGGGCCCACTTTCTaGGCAGTCCCACCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCAGPTF*AVPPEA
Trigger: GGCTTCAGGTGGGACTGCTCAGAAAGTGGGCCCTGC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTGGAGTGGAGGTAGCTaGTGGAGCCCTCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLWSGGS*WSPPGS
Trigger: GCTTCCTGGAGGGCTCCAGCAGCTACCTCCACTCCA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGCCAGGCTCTCTAGCTaGCTCAGAGCCCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCARLSS*LRALRR
Trigger: CCTCCTGAGGGCTCTGAGGCAGCTAGAGAGCCTGGC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGTCTCTGTGGACTTGCTaGTTTCTGGGGACTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLSLWTC*FLGTPE
Trigger: CTCTGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGA...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATCCTGGGCTGGCAGCTaGTCCTGCCACTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSSWAGS*SCHSLA
Trigger: GGCCAGGGAGTGGCAGGAGCAGCTGCCAGCCCAGGA...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGGTTCTTCCAGCATTCTaGTGGGTTCCCGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWVLPAF*WVPERA
Trigger: GGCCCTCTCGGGAACCCAGCAGAATGCTGGAAGAAC...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAATCCTGCCACCAGCAATaGGTGCTCCAAGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESCHQQ*VLQGRL
Trigger: GAGTCTGCCTTGGAGCACGCATTGCTGGTGGCAGGA...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGGCCCCTTGTGATCCATaGGAACCCTGTGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLAPCDP*EPCVLN
Trigger: GTTCAAGACACAGGGTTCCCATGGATCACAAGGGGC...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTTGTGTCCTGACTGCCTaGCCTCTGTGTGGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCCVLTA*PLCGVK
Trigger: CTTCACCCCACACAGAGGCCAGGCAGTCAGGACACA...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGACACGGCGGCTGCTCTaGGCTGCAGAATTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWTRRLL*AAEFAP
Trigger: AGGAGCAAATTCTGCAGCCCAGAGCAGCCGCCGTGT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGAGGGTTGGGCAACTTaGGCTGGTGCGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCEGWAT*AGAVGK
Trigger: CTTCCCCACCGCACCAGCCCAAGTTGCCCAACCCTC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp GCTCCAGCACCCACGGCATGTGGAGAATGGGCTGCCTaGTTTGGGAGGCTTGGTTTACCCTACTCCGTCGAG +
Preference number: 4 (lower is better)
Translates to: APAPTACGEWAA*FGRLGLPYSVE
Trigger: CTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGTGGGGTCCTCCACGTaGCTCTGGAGACACGACTCT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCVGSST*LWRHDS
Trigger: AGAGTCGTGTCTCCAGAGTCACGTGGAGGACCCCAC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTGGTGGGACAGCCTCTaGCATTCCAGTCTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLWWDSL*HSSLWP
Trigger: AGGCCACAGACTGGAATGTCAGAGGCTGTCCCACCA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCGCCTCTTGTCTGCTTaGGGCACCCAGTGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTARLLSA*GTQCVL
Trigger: GAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCTTGGCCTTCTGGGGTaGCTGCGTGAGTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFLGLLG*LRECGP
Trigger: GGGGCCACACTCACGCAGTCACCCCAGAAGGCCAAG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACCATAAGGGGAGACCCTaGACCCCAGGGTCGCCACAG +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHHKGRP*TPGSPQ
Trigger: CTGTGGCGACCCTGGGGTGCAGGGTCTCCCCTTATG...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTCAGACCAGTCCTGGTaGCCACAGGGCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGSDQSW*PQGTGT
Trigger: TGTCCCTGTGCCCTGTGGGCACCAGGACTGGTCTGA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATCCTGGCTCTGCCCCTaGCCTTTGGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVESWLCP*PLAPRA
Trigger: TGCCCTGGGTGCCAAAGGGCAGGGGCAGAGCCAGGA...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCTGGTCAGGCTGGCGGTaGTCTTGCTGGGCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCWSGWR*SCWAAS
Trigger: ACTTGCTGCCCAGCAAGAGCACCGCCAGCCTGACCA...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGGGCAGTGAGAGCATTTaGTACATGCTTAGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLGSESI*YMLRPR
Trigger: TCTCGGCCTAAGCATGTAGCAAATGCTCTCACTGCC...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAACACTGTGTGTCTCCTaGTCACTCAGCTCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGETLCVS*SLSSVP
Trigger: GGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGCTCACTGTCCCGGCTaGCTGGGTCTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEAHCPG*LGLVAA
Trigger: AGCTGCCACCAGACCCAGGCAGCCGGGACAGTGAGC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCTGTACAGCTGGGTTTaGCCCTCCTGCCACCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLLYSWV*PSCHQQ
Trigger: TTGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGTCTGCCCCTGCCCTTTaGCACCCAGGGCATAAAATG +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWSAPAL*HPGHKM
Trigger: CATTTTATGCCCTGGGTGCCAAAGGGCAGGGGCAGA...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGCTGGTGGTGTTGCTTaGACTGACCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCAGGVA*TDPAGA
Trigger: GGCACCTGCAGGGTCAGTCCAAGCAACACCACCAGC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTGCCTGTAGAGGCTGGTaGCCTTCTCTGCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAACRGW*PSLPDS
Trigger: GGAGTCAGGCAGAGAAGGCCACCAGCCTCTACAGGC...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCTTGGGCAACTTGGGCTaGTGCGGTGGGGAAGTTCGC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCLGNLG*CGGEVR
Trigger: GCGAACTTCCCCACCGCACCAGCCCAAGTTGCCCAA...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCAGGTCGGCCACCTGGCTaGCGGTCAGAAGCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSGRPPG*RSEAVL
Trigger: GAGGACAGCTTCTGACCGCCAGCCAGGTGGCCGACC...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTTCCGGTTGCAGCCCGTaGCCCAGCACACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTASGCSP*PSTQNS
Trigger: AGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGA...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCCGGCTGCCTGGGTCTaGTGGCAGCTGGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFPAAWV*WQLGAF
Trigger: AAAAGCCCCCAGCTGCCACCAGACCCAGGCAGCCGG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGGCCTCTGTGTGGGGTaGAGTCACCGACTTCCATTC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCGLCVG*SHRLPF
Trigger: GAATGGAAGTCGGTGACTTCACCCCACACAGAGGCC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACCCTCAGGATGGGGATTaGATTTCTGCAAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHPQDGD*ISARCS
Trigger: AGAGCATCTTGCAGAAATGCAATCCCCATCCTGAGG...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTGCTGGTGGCCTTCTCTaGCTGACTCCAAGTCCCACC +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTAGGLL*LTPSPT
Trigger: GGTGGGACTTGGAGTCAGGCAGAGAAGGCCACCAGC...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCAGAGCTGCTCTCCGCTaGGAGTCTGCTCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCRAALR*ESALSQ
Trigger: TTGGCTGAGAGCAGACTCGCAGCGGAGAGCAGCTCT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCGCCTGGTGCCGCCCTaGAGTTCAGGGGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCRLVPP*SSGEQG
Trigger: CCCCTGTTCCCCTGAACTGCAGGGCGGCACCAGGCG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGCCTCCTGCCATGCATaGTCACGGAAAGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCASCHA*SRKAPL
Trigger: CAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGACAGCCTCCTGCCATaGATGCTCACGGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCDSLLP*MLTEST
Trigger: GGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGCACTTCCTGCTGCTTaGCAGCCTAGCCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEALPAA*QPSLAR
Trigger: CCTCGCCAGGCTAGGCTGGCAAGCAGCAGGAAGTGC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCCAAGTGGGTTGCAGTaGAGTGGAGGTAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAPSGLQ*SGGSCW
Trigger: CCAGCAGCTACCTCCACTCCACTGCAACCCACTTGG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTCCCAAAGGAATCACATaGGGTGCTTGTCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCPKGIT*GACPQL
Trigger: AAGCTGGGGACAAGCACCCCATGTGATTCCTTTGGG...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTGCAGAATTTGCTCCTaGCTCTGCCCCTGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLCRICS*LCPCPL
Trigger: CAAAGGGCAGGGGCAGAGCCAGGAGCAAATTCTGCA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACTCTCGGCTCTGCCTTaGTCTGGCCAGGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSLSALP*SGQAGL
Trigger: GAGTCCAGCCTGGCCAGACCAAGGCAGAGCCGAGAG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCACAGCAGAGGGGCTTaGCTGGGCAGGTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAHSRGA*LGRSVR
Trigger: TCTTACAGACCTGCCCAGCCAAGCCCCTCTGCTGTG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGTGGTGGGGTCCAAGGTaGGAGGCTGCGGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVWWGPR*EAAVGH
Trigger: GTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCA...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCTGGGGCTGCGCCTCTaGCTGGGATTTGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTLGLRL*LGFVLD
Trigger: ATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCACCCAGCAGTGGGTGTaGCTTGGCTCTAGAATCGGC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCTQQWV*LGSRIG
Trigger: GCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp CAGCACCCACGGCATGTGGAGAATGGGCTGCCTTGTTaGGGAGGCTTGGTTTACCCTACTCCGTCGAGAAGC +
Preference number: 4 (lower is better)
Translates to: QHPRHVENGLPC*GGLVYPTPSRS
Trigger: GCTTCTCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTCCAGGAAGCTGCCGGTaGGCGAGGCCACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTPGSCR*ARPLCH
Trigger: ATGGCACAGTGGCCTCGCTCACCGGCAGCTTCCTGG...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAACCTCCAGCTTCTGACTaGGGTCCCTCTGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEPPASD*GPSGPF
Trigger: GAAGGGTCCAGAGGGACCTCAGTCAGAAGCTGGAGG...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCTCACTGACCTCTCCTaGTGGGATGGCATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLLTDLS*WDGIWK
Trigger: CTTCCAAATGCCATCCCATCAGGAGAGGTCAGTGAG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAAGCTGACCATGGGCTaGAGCAGCTCCCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDKLTMG*SSSRVW
Trigger: CCAGACCCGGGAGCTGCTGCAGCCCATGGTCAGCTT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCACACAGACTCATGCTaGTCATTTTGTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLHTDSC*SFCLPP
Trigger: AGGAGGAAGACAAAATGAGCAGCATGAGTCTGTGTG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGGCTGGCGGTGCTCTTaGTGGGCAGCAAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLGWRCS*WAASPG
Trigger: CCCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGCGTGTGAGTACGTATaGCTCACCCACGCTATCTTC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLACEYV*LTHAIF
Trigger: GAAGATAGCGTGGGTGAGGCATACGTACTCACACGC...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTCTCAGACAGCCTCCTaGCATGCATGCTCACGGAAA +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLSQTAS*HACSRK
Trigger: TTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCTGTACCCCTTCGTCTaGTGCCTGCAATATGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTALYPFV*CLQYGG
Trigger: CCCACCATATTGCAGGCAGCAGACGAAGGGGTACAG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTGTACTGGAGAGGCATaGGCTCCTTGCTTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGCTGEA*APCFVL
Trigger: CAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTACA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCAACTTCCATAGGCGGTaGAGGGAGGTGCTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCNFHRR*REVLEV
Trigger: AACCTCGAGCACCTCCCTCCACCGCCTATGGAAGTT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTGGGGGAGTTCTCTGTaGACTTGCTGCTTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGWGSSL*TCCFLG
Trigger: CCCCAGAAAGCAGCAAGTCCACAGAGAACTCCCCCA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAAGCCCATGTTCTCCTaGTGGGGCCAGCCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDKPMFS*WGQPLP
Trigger: CGGGAGAGGCTGGCCCCACCAGGAGAACATGGGCTT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCTGTGCTGTGAGGCTTaGTCAGGCTGGCGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFLCCEA*SGWRCS
Trigger: AGAGCACCGCCAGCCTGACCAAGCCTCACAGCACAG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCCCAGTGTGTCCTCGTaGGAGAGGCCTTTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFPSVSS*ERPFCP
Trigger: TGGGCAGAAAGGCCTCTCCCACGAGGACACACTGGG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAATTCGCCGCTTTGTGGTaGGTGGGCTTAGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEFAALW*VGLAPW
Trigger: CCAGGGTGCTAAGCCCACCCACCACAAAGCGGCGAA...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTCACACTTGGCCTTCTaGGGTGACTGCGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGSHLAF*GDCVSV
Trigger: CACACTCACGCAGTCACCCCAGAAGGCCAAGTGTGA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGAATGTGTATAATTCCTaGGGTTCCACCCCTCATGGT +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLNVYNS*GSTPHG
Trigger: ACCATGAGGGGTGGAACCCCAGGAATTATACACATT...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACCTGCTGCCTGCAATATaGTGGGTGGGCACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHLLPAI*WVGTSC
Trigger: GCAGGAAGTGCCCACCCACCATATTGCAGGCAGCAG...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTTGTCCTGGCACACGTTaGCCCCAAGCAAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTCPGTR*PQANVE
Trigger: CTCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACA...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGCTGCCTGGGTCTGGTaGCAGCTGGGGGCTTTTATG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEAAWVW*QLGAFM
Trigger: CATAAAAGCCCCCAGCTGCCACCAGACCCAGGCAGC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp ACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTaGTTCATTCCGGACCCTTCCTGCGTGTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: TASCHACSRKAP*FIPDPSCVFSM
Trigger: CATGGAGAACACGCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAACCCCCAACAGCTGGCTaGTCTCCTCAAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEPPTAG*SPQSTA
Trigger: TGCTGTGCTTTGAGGAGATCAGCCAGCTGTTGGGGG...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACGCACCTGCAGCTTGCTaGCTGTGTACTGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHAPAAC*LCTVAA
Trigger: AGCTGCTACAGTACACAGTCAGCAAGCTGCAGGTGC...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATCCTGTGCTCGTGGCTaGACCTTTGCCATAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVESCARG*TFAIGA
Trigger: GGCTCCTATGGCAAAGGTTCAGCCACGAGCACAGGA...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGTCGGGCAAGTTTGCTaGACCTGGTCCATCCTCACG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEVGQVC*TWSILT
Trigger: CGTGAGGATGGACCAGGTTCAGCAAACTTGCCCGAC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGAAGCCACTTACTTGTaGGCTAGACCTCAAAGGCCG +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCEATYL*ARPQRP
Trigger: CGGCCTTTGAGGTCTAGCTCACAAGTAAGTGGCTTC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGGGCATCTCCACAGCTaGTGGCAGGATCCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPGHLHS*WQDPGC
Trigger: GCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCTGCAGGAGATTTGGCTaGTCCTGGGGCTCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCCRRFG*SWGSLF
Trigger: GAAAAGAGAGCCCCAGGAGCAGCCAAATCTCCTGCA...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCGGCAGTCCTGGGGTCTaGCTGAGCCCAAACAGAATG +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFGSPGV*LSPNRM
Trigger: CATTCTGTTTGGGCTCAGGCAGACCCCAGGACTGCC...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGGGCCACACGGCGGCTaGTCTGGGCTGCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVGPHGG*SGLQNL
Trigger: CAAATTCTGCAGCCCAGAGCAGCCGCCGTGTGGCCC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGGCGGTGGAGGGAGGTaGTCGAGGTTCCCCTCCATT +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVGGGGR*SRFPSI
Trigger: AATGGAGGGGAACCTCGAGCACCTCCCTCCACCGCC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACCTTCTCTCTCGGCTCTaGCTTGGTCTGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDLLSRL*LGLARL
Trigger: CAGCCTGGCCAGACCAAGGCAGAGCCGAGAGAGAAG...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACGTCCGAGGCTCCGGTTaGAGCCCGTGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDVRGSG*SPWPST
Trigger: TGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGAC...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACGGAGGATCGTCCCTTTaGTGTACCCCAGTGGGTAAG +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHGGSSL*CTPVGK
Trigger: CTTACCCACTGGGGTACAGCAAAGGGACGATCCTCC...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGTGGCTGGACTTCCCTaGGTTGCCTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLVAGLP*VACSPG
Trigger: GCCTGGACTGCAGGCAACGCAGGGAAGTCCAGCCAC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTATCTCCCCCAACAGCTaGCTGATCTCCTCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGISPNS*LISSKH
Trigger: GTGCTTTGAGGAGATCAGCCAGCTGTTGGGGGAGAT...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGCACTTCTCCATCCTTaGAGATCTCCCCCAACAGCT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCALLHP*RSPPTA
Trigger: AGCTGTTGGGGGAGATCTCCAAGGATGGAGAAGTGC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTAGAGGCCCTCAGCTTTaGGGAAGCCCATGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTRGPQL*GSPCSP
Trigger: AGGAGAACATGGGCTTCCCCAAAGCTGAGGGCCTCT...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGAGGCTTGGTCAGGCTaGCGGTGCTCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLEAWSG*RCSCWA
Trigger: TGCCCAGCAAGAGCACCGCCAGCCTGACCAAGCCTC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGATGGAGGGCCGGAGTaGTGCCAGGCGATGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCDGGPE*CQAMAF
Trigger: GAAGGCCATCGCCTGGCACCACTCCGGCCCTCCATC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGGTGGGGTCAGTGGGTaGGCTGTTGAGAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLGGVSG*AVESGG
Trigger: ACCGCCACTCTCAACAGCCCACCCACTGACCCCACC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTTGGCGGCAGCGATGGTaGGGTCAGTGGGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPWRQRW*GQWVGC
Trigger: ACAGCCCACCCACTGACCCCACCATCGCTGCCGCCA...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTATTCATAAGAGGTGCTaGTGGGGTCCAAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGIHKRC*WGPRWE
Trigger: CTCCCACCTTGGACCCCACCAGCACCTCTTATGAAT...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACAGCACACAGAACTCTaGGGGAGATGCACGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSQHTEL*GRCTPG
Trigger: ACCAGGCGTGCATCTCCCCCAGAGTTCTGTGTGCTG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACGTCAGGCTGGACACTTaGCTGTCACACTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHVRLDT*LSHLAF
Trigger: GAAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGAC...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTATCTCTGGGTCAGGCTaGACACTTGGCTGTCACACT +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGISGSG*TLGCHT
Trigger: AGTGTGACAGCCAAGTGTCCAGCCTGACCCAGAGAT...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTGAGAGGCAGCGTGGCTaGTATTGTGAGCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTERQRG*YCELSA
Trigger: AGCTGACAGCTCACAATACCAGCCACGCTGCCTCTC...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGCTTGTTTGGGAGGCTTaGTTTACCCTACTCCGTCGA +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLLVWEA*FTLLRR
Trigger: TCGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAG...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTGCTTTGCAGCAGATCTaGAGGATCGTCCCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGALQQI*RIVPLL
Trigger: CAGCAAAGGGACGATCCTCCAGATCTGCTGCAAAGC...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACTTGCCAGCCTAGCCTaGCGAGGGACAACCTCTAGT +
Preference number: 4 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSLASLA*RGTTSS
Trigger: ACTAGAGGTTGTCCCTCGCCAGGCTAGGCTGGCAAG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAACTGCCTGCAATATGGTaGGTGGGCACTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNELPAIW*VGTSCC
Trigger: GCAGCAGGAAGTGCCCACCCACCATATTGCAGGCAG...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCGACAAGGAGGCATCATaGGCATCTCCACAGCTGATG +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCDKEAS*ASPQLM
Trigger: CATCAGCTGTGGAGATGCCCATGATGCCTCCTTGTC...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp CCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTaGGCCAAGAAGCCTCCGAGGGGAGATCGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: PAEVLQDDLGIK*AKKPPRGDRRV
Trigger: CACACGCCGATCTCCCCTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCGGGTCTGGGTGGCCTaGTGGATGATGCACAGAATT +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFRVWVA*WMMHRI
Trigger: AATTCTGTGCATCATCCATCAGGCCACCCAGACCCG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCGTTTCCTTGTGCTCCTaGGAAGGGGACATTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFVSLCS*EGDIGG
Trigger: ACCCCCAATGTCCCCTTCTCAGGAGCACAAGGAAAC...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTCTTTTGCCAACCCATTaGGCCGGCATTGAATCACTC +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGLLPTH*AGIESL
Trigger: GAGTGATTCAATGCCGGCTCAATGGGTTGGCAAAAG...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACTGAATGCCACTCTTTaGAACGCTGTTTACAAGGTC +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGELNATL*NAVYKV
Trigger: GACCTTGTAAACAGCGTTGCAAAGAGTGGCATTCAG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGAGCAGTGGCTCTGTGTaGTTGACGTGTGACATTTTG +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLSSGSV*LTCDIL
Trigger: CAAAATGTCACACGTCAAGCACACAGAGCCACTGCT...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAACCGGGAAGTCCACTTTaGCTTCAGGCTCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEPGSPL*LQAHEQ
Trigger: CTGCTCATGAGCCTGAAGGCAAAGTGGACTTCCCGG...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAGGTCCCAGCTGGTTTaGTTGCCCAGCTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDRSQLV*LPSLST
Trigger: GGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCAGAATGGACTTTGCTaGCAGGTGTGTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTQNGLC*QVCPDC
Trigger: GCAGTCAGGACACACCTGGCAGCAAAGTCCATTCTG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGAGGCATGGGCTCCTTaGTTCGTCCTGTGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVEAWAP*FVLCSW
Trigger: CCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCAGTTCTCTGTGGACTTaGTGCTTTCTGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCSSLWT*CFLGTP
Trigger: TGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTCCGGCGCCTCTTGTCTaGTTGAGGCACCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTPAPLV*LRHPVC
Trigger: ACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGG...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGCCACTCCAGTCTCCCTaGAGCTGGGGAACAGCTTCG +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLPLQSP*SWGTAS
Trigger: CGAAGCTGTTCCCCAGCTGCAGGGAGACTGGAGTGG...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAACTTGCTTCCCCTCACTaGTGGAGTGGCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNELASPH*WSGSTS
Trigger: TGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGCAAG...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACTGTGGTGGAATAATCTaGCTGGCTCCCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDCGGII*LAPCCR
Trigger: GCGGCAGCAGGGAGCCAGGCAGATTATTCCACCACA...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTTGGGTTTGCCCCTCCTaGCACCAGCAATGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTWVCPS*HQQCVL
Trigger: GAGCACGCATTGCTGGTGGCAGGAGGGGCAAACCCA...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCTGTCCTTTTCCATTTaGAAGTATCTTGGGTACTAC +
Preference number: 4 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLLSFSI*KYLGYY
Trigger: GTAGTACCCAAGATACTTCCAAATGGAAAAGGACAG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACCGGGGCTTTGGCTGGTaGCTGGTGGGCTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDRGFGW*LVGCSG
Trigger: ACCTGAGCAGCCCACCAGCCACCAGCCAAAGCCCCG...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGGCTGCCTGTAGAGGCTaGTGGCCTTCTCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLAACRG*WPSLPD
Trigger: GTCAGGCAGAGAAGGCCACCAGCCTCTACAGGCAGC...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGATTTGTCCTGGATGTaGCCGGTCCGAGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVDLSWM*PVRGSG
Trigger: ACCGGAGCCTCGGACCGGCCACATCCAGGACAAATC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAGGCTGGGATTTGTCCTaGATGTGGCCGGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQGWDLS*MWPVRG
Trigger: GCCTCGGACCGGCCACATCCAGGACAAATCCCAGCC...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACCTTGGCTGTCACACTTaGCCTTCTGGGGTGACTGCG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDLGCHT*PSGVTA
Trigger: CGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAG...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGGCCCCTGCCCTGCCTaGGTGGCTGGACTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHGPCPA*VAGLPC
Trigger: GCAGGGAAGTCCAGCCACCCAGGCAGGGCAGGGGCC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp GCCACCAGCAATGCGTGCTCCAAGGCAGACTCAAGTTaGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGAC +
Preference number: 4 (lower is better)
Translates to: ATSNACSKADSS*WKTWSLGGKTD
Trigger: GTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp AAAGGAAGTGGATTTGGCCCAGCAAGGATACCATTCTaGGGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KGSGFGPARIPF*GRREMVGVSSP
Trigger: AGGGCTGCTCACGCCCACCATCTCCCTTCTACCCAAGAATGGTATCCTTGCTGGGCCAAATCCACTTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTGGGTGGCCTGATGGATaGTGCACAGAATTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTGWPDG*CTELLH
Trigger: ATGAAGCAATTCTGTGCATCATCCATCAGGCCACCC...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACCTCCTGGTGCGGGCCTaGAATGGGCTTTCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDLLVRA*NGLSRS
Trigger: TGACCGGGAAAGCCCATTTCAGGCCCGCACCAGGAG...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAAGCAAGATCTGGGACTaGAAACGGCGATTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGESKIWD*KRRLFK
Trigger: TTTAAACAATCGCCGTTTTCAGTCCCAGATCTTGCT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCCTGGACTTTTAAGATaGGGCCCTTTACGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTPGLLR*GPLRKE
Trigger: CTCCTTCCGTAAAGGGCCTCATCTTAAAAGTCCAGG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACTGGAGTGGGGGAAGCTaGCTTGGAATTCCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDWSGGS*LGIPVA
Trigger: GGCTACTGGAATTCCAAGTCAGCTTCCCCCACTCCA...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACTACTGTAGCAGCTGTTaGAGGAGATTTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHYCSSC*RRFGCS
Trigger: GGAGCAGCCAAATCTCCTGCAACAGCTGCTACAGTA...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGACTGGGACCTCGTCTaGCTCTCAGGGGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGDWDLV*LSGALL
Trigger: CAGGAGGGCCCCTGAGAGGCAGACGAGGTCCCAGTC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCACTTTGGCTATGACTaGTTGGCTGTCTTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAHFGYD*LAVFRV
Trigger: GACTCTGAAGACAGCCAAGCAGTCATAGCCAAAGTG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACCACCAGACTCATCTGTaGAAAATTTTGCTCTATTCT +
Preference number: 4 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHHQTHL*KILLYS
Trigger: AGAATAGAGCAAAATTTTGCACAGATGAGTCTGGTG...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATCCTTGGCCCCTGCCCTaGCTGGGTGGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHPWPLP*LGGWTS
Trigger: GGAAGTCCAGCCACCCAGGCAGGGCAGGGGCCAAGG...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGCTGGAGACTCAGCCTTaGTTCCCCTCACTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVLETQP*FPSLLE
Trigger: CTCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAG...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCCTTCGTCTGCTGCCTaGAATATGGTGGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCPSSAA*NMVGGH
Trigger: GTGCCCACCCACCATATTGCAGGCAGCAGACGAAGG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACTACCCCTTCGTCTGCTaGCTGCAATATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDYPFVC*LQYGGW
Trigger: CCACCCACCATATTGCAGGCAGCAGACGAAGGGGTA...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACGCCACCAGCAATGCGTaGTCCAAGGCAGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDATSNA*SKADSS
Trigger: ACTTGAGTCTGCCTTGGAGCACGCATTGCTGGTGGC...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCAATGTGAAGAGGGAGTaGTACCTGTCGTCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCNVKRE*YLSSCC
Trigger: ACAACAGGACGACAGGTACCACTCCCTCTTCACATT...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCCATTCTTCGGGCTCTaGTGCAAGGTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCPFFGL*CKVPAG
Trigger: ACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGAGAGCAGGCAGTCCTaGGGTCTGCCTGAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCESRQS*GLPEPK
Trigger: TTTGGGCTCAGGCAGACCCCAGGACTGCCTGCTCTC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACGGTGCGGGCCTGAAATaGGCTTTCCCGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDGAGLK*AFPVSR
Trigger: CCTGCTGACCGGGAAAGCCCATTTCAGGCCCGCACC...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGACCCGGCCCTGGCTCCTaGGTTTCCTTGGGGGAGTTC +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGPGPGS*VSLGEF
Trigger: GAACTCCCCCAAGGAAACCCAGGAGCCAGGGCCGGG...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGCTCAGGTCCAGGGCTaGCTTCCTGGGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGAQVQG*LPGLAA
Trigger: AGCTGCCAGCCCAGGAAGCCAGCCCTGGACCTGAGC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCAAGTTCGCCGCTTTGTaGTGGGTGGGCTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCKFAAL*WVGLAP
Trigger: GGGTGCTAAGCCCACCCACCACAAAGCGGCGAACTT...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACCTTCCAGCATTCTGCTaGGTTCCCGAGAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDLPAFC*VPERAP
Trigger: GGGGGCCCTCTCGGGAACCCAGCAGAATGCTGGAAG...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCATAAGAGGTGCTGGTaGGGTCCAAGGTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCHKRCW*GPRWEA
Trigger: AGCCTCCCACCTTGGACCCCACCAGCACCTCTTATG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACTGGGGGAAGCTGACTTaGAATTCCAGTAGCCTAAGG +
Preference number: 4 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHWGKLT*NSSSLR
Trigger: CCTTAGGCTACTGGAATTCCAAGTCAGCTTCCCCCA...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTTGTGTGCTTGACGTGTaGCATTTTGCTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGCVLDV*HFAVLF
Trigger: GAAAAGGACAGCAAAATGTCACACGTCAAGCACACA...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGTCCTGGGGTCTGCCTaGGCCCAAACAGAATGGACT +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPVLGSA*AQTEWT
Trigger: AGTCCATTCTGTTTGGGCTCAGGCAGACCCCAGGAC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCGCTGTCACTAAGAGATaGAGCGTCCATCGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCAVTKR*SVHRPG
Trigger: TCCAGGCCGATGGACGCTTCATCTCTTAGTGACAGC...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCCTCCATTTCACAGCTaGGCTCCTCACTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCPPFHS*APHSWL
Trigger: CAGCCAAGAGTGAGGAGCTCAGCTGTGAAATGGAGG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAGTTCTGGTTAACCTTTaGACCCCAAGGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEVLVNL*TPRQSK
Trigger: CTTGCTCTGCCTTGGGGTTCAAAGGTTAACCAGAAC...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACGGGGAGATCGGCGTGTaGGTACGTATGCCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDGEIGV*VRMPHP
Trigger: TGGGTGAGGCATACGTACTCACACGCCGATCTCCCC...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTCCCAGCTGGTTTGCTTaGCCAGCTTGTCCACCGACT +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCPSWFA*PACPPT
Trigger: AGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGG...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAGAAGCTTCCCAGCTTTaGCTTGTTCGTCCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEEASQL*LVRPQD
Trigger: ATCCTGAGGACGAACAAGGCAAAGCTGGGAAGCTTC...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACCTCCTCACTCTTGGCTaGTTCTGCTTTAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDLLTLG*FCFRQR
Trigger: CCTCTGCCTAAAGCAGAAGCAGCCAAGAGTGAGGAG...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCGGCAACTTGGGCTGGTaGGGTGGGGAAGTTCGCCGC +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTGNLGW*GGEVRR
Trigger: GCGGCGAACTTCCCCACCGCACCAGCCCAAGTTGCC...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTCGCAAAACTGAAGAATaGTATGTGCTTCATTCACTG +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCRKTEE*YVLHSL
Trigger: CAGTGAATGAAGCACATAGCATTCTTCAGTTTTGCG...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACATGTGGAGAATGGGCTaGCTTGTTTGGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDMWRMG*LVWEAW
Trigger: CCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACAT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCGGCAACAGGAGCAAATaGGAGCAGACAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCGNRSK*EQTAGC
Trigger: ACACCCAGCTGTCTGCTCGCATTTGCTCCTGTTGCC...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTTCCGCCCTGACATCCTaGCCGAATTGCTTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTSALTS*PNCFGL
Trigger: AAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGA...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTTGGTTTGGTTCCTCCTaGGACTTGGCTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTWFGSS*DLAAPL
Trigger: CAGAGGAGCAGCCAAGTCCCAGGAGGAACCAAACCA...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGTGCAAGGTCCCAGCTaGTTTGCTTGCCCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVVQGPS*FACPAC
Trigger: ACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCAC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTTTGGCTATGACTGCTTaGCTGTCTTCAGAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRREMVGVSSPCLRSCTALAMTA*LSSESL
Trigger: AAGAGACTCTGAAGACAGCCAAGCAGTCATAGCCAA...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTACCTCAGTAGGAGTTTaGTTTGCCCATCATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTTSVGV*FAHHLW
Trigger: CCAGAGATGATGGGCAAACCAAACTCCTACTGAGGT...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGATGCGAGCAGACAGCTaGGTGTGTCCCTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLMRADS*VCPFPA
Trigger: TGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCAT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGGGTTCCACCCCTCATaGTACCCCAGTTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCGFHPS*YPSFTH
Trigger: GTGGGTGAAACTGGGGTACCATGAGGGGTGGAACCC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTCTTTCACTTCCGCCCTaGCATCCTGGCCGAATTGCT +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPLSLPP*HPGRIA
Trigger: AGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAG...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAATCTTTCCTTTTGCCTaGAGCAGGATCTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEIFPFA*SRISHE
Trigger: CTCATGGGAGATCCTGCTTCAGGCAAAAGGAAAGAT...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTCCTTGGCAGCCTCACTaGCCTCTCCTGATGGGATGG +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGPWQPH*PLLMGW
Trigger: CCATCCCATCAGGAGAGGTCAGTGAGGCTGCCAAGG...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACCAGACACTTTGGCTATaGCTGCTTGGCTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDQTLWL*LLGCLQ
Trigger: CTGAAGACAGCCAAGCAGTCATAGCCAAAGTGTCTG...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGAATTCACATGTAATTTaGGCTAAGTCTGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWNSHVI*AKSGSW
Trigger: CCAACTACCAGACTTAGCTCAAATTACATGTGAATT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTCCACATTCCTTTTTGTaGTCAGCTTATTTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KEASWASPQLMAGSRVPCPHSFL*SAYFPS
Trigger: ACTTGGAAAATAAGCTGAGCACAAAAAGGAATGTGG...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCACTCCCTGGCCCTGTaGTGTGAGGCTTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTHSLAL*CEAWSG
Trigger: GCCTGACCAAGCCTCACAGCACAGGGCCAGGGAGTG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCGGGGGCTGGGGACCTTaGACTGAGCAGGTGCACTCT +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTGGWGP*TEQVHS
Trigger: AGAGTGCACCTGCTCAGTGCAAGGTCCCCAGCCCCC...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGCATGAGCAGGGTGGATaGTTTGGTAGCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLHEQGG*FGSSGS
Trigger: AGAGCCACTGCTACCAAACCATCCACCCTGCTCATG...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGTTCGTCCTGTGCTCGTaGCTGAACCTTTGCCATAGG +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLFVLCS*LNLCHR
Trigger: CCTATGGCAAAGGTTCAGCCACGAGCACAGGACGAA...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTTTTCTGGGCTTGTACTaGAGAGGCATGGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTFLGLY*RGMGSL
Trigger: CAAGGAGCCCATGCCTCTCCAGTACAAGCCCAGAAA...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAAGACACGACTCTGACTaGGACCTCGTCTGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQRHDSD*DLVCLS
Trigger: TGAGAGGCAGACGAGGTCCCAGTCAGAGTCGTGTCT...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCCTCTCCTGATGGGATaGCATTTGGAAGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCPLLMG*HLEASQ
Trigger: CTGGGAAGCTTCCAAATGCCATCCCATCAGGAGAGG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTAGTGGTGCCAGGCGATaGCCTTCCGGGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFSGARR*PSGAAC
Trigger: ACAGGCAGCCCCGGAAGGCCATCGCCTGGCACCACT...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCTGCGGTCGGCCACCTaGCTGGCGGTCAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFLRSAT*LAVRSC
Trigger: ACAGCTTCTGACCGCCAGCCAGGTGGCCGACCGCAG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCTTTGCCCATCATCTCTaGGTCAGGCTGGACACTTGG +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCFAHHL*VRLDTW
Trigger: CCAAGTGTCCAGCCTGACCCAGAGATGATGGGCAAA...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCCCTGCCTGGGTGGCTaGACTTCCCTGCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFPCLGG*TSLRCL
Trigger: CAGGCAACGCAGGGAAGTCCAGCCACCCAGGCAGGG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAACAAGGATACCATTCTTaGGTAGAAGGGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEQGYHS*VEGRWW
Trigger: CCACCATCTCCCTTCTACCCAAGAATGGTATCCTTG...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCAAAGGAAGTGGATTTaGCCCAGCAAGGATACCATT +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTQRKWI*PSKDTI
Trigger: AATGGTATCCTTGCTGGGCCAAATCCACTTCCTTTG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp AGTCTGGTAGTTGGTATGGTAGCCAAAAACACATCTTaGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCT +
Preference number: 4 (lower is better)
Translates to: SLVVGMVAKNTS*TRLLLCRLSTA
Trigger: AGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCTACCATACCAACTACCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACTTGCCTTCAGGCTCATaGGCAGGGTGGATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDLPSGS*AGWMVW
Trigger: CCAAACCATCCACCCTGCTCATGAGCCTGAAGGCAA...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATCTGGAGACACGACTCTaGCTGGGACCTCGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHLETRL*LGPRLP
Trigger: AGGCAGACGAGGTCCCAGTCAGAGTCGTGTCTCCAG...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGAGAGATTCTCTGCCTaGTGCTGGAGAAATTTGGGG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVERFSA*CWRNLG
Trigger: CCCCAAATTTCTCCAGCATCAGGCAGAGAATCTCTC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGTTTAGGCAGGTGGAGTaGCGCAATAGTTACGGGCAA +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVFRQVE*RNSYGQ
Trigger: TTGCCCGTAACTATTGCGTCACTCCACCTGCCTAAA...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGTTCTTTGGGTGCCTTTaGATAATAATTGGACAAGTC +
Preference number: 4 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLFFGCL*IIIGQV
Trigger: GACTTGTCCAATTATTATTCAAAGGCACCCAAAGAA...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCAGGTGTGTCCTGACTaGCTGGCCTCTGTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTQVCPD*LASVWG
Trigger: ACCCCACACAGAGGCCAGGCAGTCAGGACACACCTG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCATTCCGGACCCTTCCTaGGTGTTCTCCATGATACTG +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCIPDPS*VFSMIL
Trigger: CAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCTGTGATTTGTTCAGCTaGGATGAAGAGGTTTTGGTT +
Preference number: 4 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCCDLFS*DEEVLV
Trigger: AACCAAAACCTCTTCATCCCAGCTGAACAAATCACA...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCTACCGTGCTAGGTCTTaGGGGGACCACTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTYRARS*GDHCPP
Trigger: GGGAGGACAGTGGTCCCCCCAAGACCTAGCACGGTA...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTATTCAGCAGACCCACTaGGCAGTGCACCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGIQQTH*AVHLPG
Trigger: GCCTGGAAGGTGCACTGCCCAGTGGGTCTGCTGAAT...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACAGCACCCACGGCATGTaGAGAATGGGCTGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDSTHGM*RMGCLV
Trigger: AACAAGGCAGCCCATTCTCCACATGCCGTGGGTGCT...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTCACCACAGCCTCCAGTaGAAGCATTCCAAGATCTGC +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPHHSLQ*KHSKIC
Trigger: GCAGATCTTGGAATGCTTCCACTGGAGGCTGTGGTG...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGATTTCCAGCAGAGGGGTaGGTTGTGGCCCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGFPAEG*VVAPLG
Trigger: ACCAAGAGGGGCCACAACCCACCCCTCTGCTGGAAA...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTGTGTGTGGGGACCTATaGCAGGAGCCTCGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFVCGDL*QEPRPV
Trigger: GACAGGGCGAGGCTCCTGCCATAGGTCCCCACACAC...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCAGTTTGTGGAAGACCTaGTCTCTAGGAGGCAAAACT +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFSLWKT*SLGGKT
Trigger: AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACT...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTGGATCTCCCATGAGCTaGCAAAGACCTTTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCGSPMS*QRPLAV
Trigger: CACAGCTAAAGGTCTTTGTCAGCTCATGGGAGATCC...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATAATGCCTCCAGCTTCTaGCTGAGGTCCCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHNASSF*LRSLWT
Trigger: GGTCCAGAGGGACCTCAGTCAGAAGCTGGAGGCATT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTTCATATGCGCAAAACTaGAGAATGCTATGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTSYAQN*RMLCAS
Trigger: TGAAGCACATAGCATTCTTCAGTTTTGCGCATATGA...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGACTGAGCAGTCCCACCTaGAGCCACTTACTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGLSSPT*SHLLVS
Trigger: GCTCACAAGTAAGTGGCTTCAGGTGGGACTGCTCAG...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACCCATATCTTTCCTTTTaGCTGAAGCAGGATCTCCCA +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDPYLSF*LKQDLP
Trigger: TGGGAGATCCTGCTTCAGGCAAAAGGAAAGATATGG...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGAAACAGAATGGACTTTaGTGCCAGGTGTGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLKQNGL*CQVCPD
Trigger: GTCAGGACACACCTGGCAGCAAAGTCCATTCTGTTT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGACCTTGCTTCGTCCTGTaGTCGTGGCTGAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGPCFVL*SWLNLC
Trigger: GCAAAGGTTCAGCCACGAGCACAGGACGAAGCAAGG...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTAGGAATCACATGGGGTaGTTGTCCCCAGCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCRNHMG*LSPASK
Trigger: CTTTGAAGCTGGGGACAAGCACCCCATGTGATTCCT...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCAGACCCACTGGGCAGTaGACCTTCCAGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTRPTGQ*TFQAFP
Trigger: TGGAAAGGCCTGGAAGGTGCACTGCCCAGTGGGTCT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAGAATTCTTGTCTTTTaGCAACCCATTGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDRILVF*QPIEPA
Trigger: TGCCGGCTCAATGGGTTGGCAAAAGACAAGAATTCT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGCTCACTCAGCTCAGTaGCCAGCTTACCTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGAHSAQ*PAYLRL
Trigger: GAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGAGCTTATTTTCCAAGTaGGTTGCAGTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVSLFSK*VAVEWR
Trigger: CCTCCACTCCACTGCAACCCACTTGGAAAATAAGCT...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGTGTTCGTCCTCAGGATaGGGATTGCATTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLCSSSG*GLHFCK
Trigger: CTTGCAGAAATGCAATCCCCATCCTGAGGACGAACA...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGATGCTGGAGAAATTTaGGGCTTCGGATACAAAGGG +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTDAGEI*GFGYKG
Trigger: CCCTTTGTATCCGAAGCCCCAAATTTCTCCAGCATC...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCTTGGGCTGGTGCGGTaGGGAAGTTCGCCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFLGLVR*GSSPLC
Trigger: ACAAAGCGGCGAACTTCCCCACCGCACCAGCCCAAG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGCAGAGAGGAGGTAGCTaGGCAGAATATGGAATGTGT +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLQRGGS*AEYGMC
Trigger: ACACATTCCATATTCTGCCCAGCTACCTCCTCTCTG...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGACAGTCTCCCTGCAGCTaGGGAACAGCTTCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGQSPCS*GTASFP
Trigger: AGGAAACGAAGCTGTTCCCCAGCTGCAGGGAGACTG...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCCCTCACTGCTGGAGTaGCTCCACTTCATATCCCGG +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTPSLLE*LHFISR
Trigger: CCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTTACTGGGCAACACAATaGTGTCACCAGCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPYWATQ*CHQLTV
Trigger: GACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTTTCTTGGTCCAAATGTaGAGAGGGAGTGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCFLVQM*RGSGTC
Trigger: ACAGGTACCACTCCCTCTTCACATTTGGACCAAGAA...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTTGGTGTTGCTTGGACTaGCCCTGCAGGTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFWCCLD*PCRCHW
Trigger: CCAATGGCACCTGCAGGGTCAGTCCAAGCAACACCA...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAAGCCTATGCCCATTTTaGGAGATTCTCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQSLCPF*EILCLM
Trigger: CATCAGGCAGAGAATCTCTCAAAATGGGCATAGGCT...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGCGTGGCTGGTATTGTaGGCTGTCAGCTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPAWLVL*AVSFKF
Trigger: AAACTTAAAGCTGACAGCTCACAATACCAGCCACGC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCAACTGTTTTTCACTTTaGTTTCGACTCCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFNCFSL*FRLQQK
Trigger: CTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTT...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTCCATTGAGCCGGCATTaGATCACTCAATTACTGCAA +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTPLSRH*ITQLLQ
Trigger: TTGCAGTAATTGAGTGATTCAATGCCGGCTCAATGG...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTCATTGTCAGCACCAATaGCACTGTCCTCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPHCQHQ*HCPQSI
Trigger: TATGCTCTGAGGACAGTGGCATTGGTGCTGACAATG...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCTTCTTCGGGCTCTGGTaGAAGGTCCCAGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTFFGLW*KVPAGL
Trigger: CAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAA...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGAGGCACACAGACTCATaGTGCTCATTTTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLRHTDS*CSFCLP
Trigger: AGGAAGACAAAATGAGCAGCATGAGTCTGTGTGCCT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGTTCTTGGTGAGGGATaGCTTGAGCCTGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHVLGEG*LEPAGG
Trigger: ACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAAC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAATATCCTTAGCCATGTaGCTTTGTGATTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IPDPSCVFSMILTPSVVEISLAM*LCDLFS
Trigger: GCTGAACAAATCACAAAGCCACATGGCTAAGGATAT...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATCTGTTGCAGGAGATTTaGCTGCTCCTGGGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHLLQEI*LLLGLS
Trigger: AGAGAGCCCCAGGAGCAGCCAAATCTCCTGCAACAG...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGATTGGTCTGGCCAGGCTaGACTCTGAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGLVWPG*TLRSCF
Trigger: AAAACAGGACCTCAGAGTCCAGCCTGGCCAGACCAA...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTTCTGCTTTAGGCAGGTaGAGTGACGCAATAGTTACG +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCSALGR*SDAIVT
Trigger: CGTAACTATTGCGTCACTCCACCTGCCTAAAGCAGA...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCACGGCATGTGGAGAATaGGCTGCCTTGTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTTACGE*AALFGR
Trigger: CCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTCCCATGGTGACCCAATaGTTGGTCTGCCCAACCATT +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGPMVTQ*LVCPTI
Trigger: AATGGTTGGGCAGACCAACCATTGGGTCACCATGGG...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGGCTTTTTCAAGAACTaGATGCCACTCTTTGCAACG +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPGFFKN*MPLFAT
Trigger: CGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAGTGATCTCAAGGAATaGACCCAGTTAAAACCCTAT +
Preference number: 4 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDSDLKE*TQLKPY
Trigger: ATAGGGTTTTAACTGGGTTCATTCCTTGAGATCACT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTAGAAGTTCTGCAAGATaGCCTGGGAATAAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPRSSAR*PGNKVG
Trigger: GCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCT...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTAGCACTTCTCTGAGATaGGGGCGGCAACAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFSTSLR*GRQQEQ
Trigger: TTGCTCCTGTTGCCGCCCTCATCTCAGAGAAGTGCT...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTTCCTCCCTGACTTCCTaGAGGAGCACTTCTCCATCC +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFSSLTS*RSTSPS
Trigger: GGATGGAGAAGTGCTCCTGCAGGAAGTCAGGGAGGA...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCAGCTTGTCCACCGACTaGACGGACTCATTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTSLSTD*TDSLSA
Trigger: TGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTGGGATTCATAAGAGGTaGTGGTGGGGTCCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFGIHKR*WWGPRW
Trigger: CCACCTTGGACCCCACCAGCACCTCTTATGAATCCC...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCAGAGCATTTGCTACATaGTTAGGCCGAGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTRAFAT*LGREAA
Trigger: CGCTGCCTCTCGGCCTAAGCATGTAGCAAATGCTCT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGCAAAACTGACCAGATaGCACAAAACTGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVAKLTR*HKTVPL
Trigger: CAATGGAACAGTTTTGTGGCATCTGGTCAGTTTTGC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCCTGGCCGAATTGCTTTaGGCTTTTTCAAGAACTGAA +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCLAELL*AFSRTE
Trigger: TTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAG...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACGGTTTTGGAAAGGTGTaGTTCCACAGAGACCCCAAT +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDGFGKV*FHRDPN
Trigger: ATTGGGGTCTCTGTGGAACCACACCTTTCCAAAACC...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATAAGCGTCCATCGGCCTaGAGGTTTTGGAAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHKRPSA*RFWKGV
Trigger: CACACCTTTCCAAAACCTCCAGGCCGATGGACGCTT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCTCAGCCTTCTCATTTTaGGAGCCATGCACTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCSAFSF*EPCTSK
Trigger: TTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTGA...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCGCTTCCCCTCACTGCTaGAGTGGCTCCACTTCATAT +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTASPHC*SGSTSY
Trigger: ATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGGCTAAGTCTGGTAGTTaGTATGGTAGCCAAAAACAC +
Preference number: 4 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVAKSGS*YGSQKH
Trigger: GTGTTTTTGGCTACCATACCAACTACCAGACTTAGC...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCCAAAAACACATCTTTaGCCCGCCTGCTCCTATGTC +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTPKTHL*PACSYV
Trigger: GACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATTTTCCAAGTGGGTTaGAGTGGAGTGGAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGIFQVG*SGVEVA
Trigger: AGCTACCTCCACTCCACTGCAACCCACTTGGAAAAT...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTACTTTGTCAATGCTGTaGCGCTACTTAACCTTACAA +
Preference number: 4 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTTLSML*RYLTLQ
Trigger: TTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGT...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTCATATTTGGAGAGGCTaGAGTGTAGATAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCHIWRG*SVDRCK
Trigger: CTTACACCTATCTACACTCCAGCCTCTCCAAATATG...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATCCCCAGCTTCAAAGGTaGGGAGGTGATATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHPQLQR*GGDIFW
Trigger: CCAGAAAATATCACCTCCCCACCTTTGAAGCTGGGG...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATATGGGCTGCCTTGTTTaGGAGGCTTGGTTTACCCTA +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHMGCLV*EAWFTL
Trigger: TAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCAT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAAAGGTGTACACCCCATaGTTTCAGCTTGTAGTCATC +
Preference number: 4 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGKVYTP*FQLVVI
Trigger: GATGACTACAAGCTGAAATCATGGGGTGTACACCTT...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCTCTAGGAGGCAAAACTaGCCAGATGCCACAAAACTG +
Preference number: 4 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTSRRQN*PDATKL
Trigger: CAGTTTTGTGGCATCTGGTCAGTTTTGCCTCCTAGA...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTACCCAGGGCATAAAATaGCTCCAGCTTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFTQGIK*LQLLTE
Trigger: CTCAGTCAGAAGCTGGAGGCATTTTATGCCCTGGGT...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATAGCTTTGCGACCATTTaGGCACCCATGTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHSFATI*APMSAL
Trigger: TAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGGGATGAAGAGGTTTTaGTTCCTGGGATCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHGMKRF*FLGSVL
Trigger: AAGGACTGATCCCAGGAACCAAAACCTCTTCATCCC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGGAGGTGATATTTTCTaGGCTTGTACTGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHGGDIF*ACTGEA
Trigger: TGCCTCTCCAGTACAAGCCCAGAAAATATCACCTCC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTAAATATCTAGCTCATTaGCAGAAGCAGGTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCKYLAH*QKQVFG
Trigger: GCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTT...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTTTTGCTGTACCCCAGTaGGTAAGAATTCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCFAVPQ*VRILVF
Trigger: AAAGACAAGAATTCTTACCCACTGGGGTACAGCAAA...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTAAGATGCTCTTGTCCTaGCTAGGCAAAATACTGAAG +
Preference number: 4 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGKMLLS*LGKILK
Trigger: CTTCAGTATTTTGCCTAGTCAGGACAAGAGCATCTT...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGTTGTGAGGCTTAAGTaGTCTCAAGGAATGAACCCA +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHVVRLK*SQGMNP
Trigger: TGGGTTCATTCCTTGAGATCACTTAAGCCTCACAAC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATACAACAAAGAAGCTTTaGGACCATTTGCGCACCCAT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHTTKKL*DHLRTH
Trigger: ATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCTCCAGAGAAGCGAATaGTTTGTCCATCAGAACTTC +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFLQRSE*FVHQNF
Trigger: GAAGTTCTGATGGACAAATCATTCGCTTCTCTGGAG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR TCA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACATTAAGGCCAGCACTTaGAGCATTAAATACTGTCAT +
Preference number: 4 (lower is better)
Translates to: QPSHFGSHALLNKALNRDIKAST*SIKYCH
Trigger: ATGACAGTATTTAATGCTTCAAGTGCTGGCCTTAAT...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
3UTR CAA 72 bp GAAGCAGGTTTTTGGCATGAACAACTGTTTTTCACTTaGATTTCGACTCCAGCAGAAGTTCTGCAAGATGAC +
Preference number: 4 (lower is better)
Translates to: EAGFWHEQLFFT*ISTPAEVLQDD
Trigger: GTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTTGTTCATGCCAAAAACCTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR GCA 90 bp TTCCAAGATCTGCAGCAAATATCTAGCTCATTGGCAGAAGCAGGTTTTTGGCATGATGATGCACAGAATTaGTTCATATTTGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FQDLQQISSSLAEAGFWHDDAQN*FIFGEA
Trigger: AGCCTCTCCAAATATGAAGCAATTCTGTGCATCATC...ATGCCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTGCTGCAGATCTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CCA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCATTTGGAAGTATCTTaGGTACTACTTTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFHLEVS*VLLSSL
Trigger: GAGTGAGGAAAGTAGTACCCAAGATACTTCCAAATG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GACACCTCCTCTTGCTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTaGATGTGGCCGGTCCGAGGCTCCGGTTGCAGCCCGTGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: DTSSCWGCASGWDLS*MWPVRGSGCSPWPS
Trigger: GCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTGCTGGGGCTaGGCCTCTGGCTGGGATTTGTCCTGGATGTGGCCGGTCCGAGGC +
Preference number: 5 (lower is better)
Translates to: VAPSSACQDTSSCWG*ASGWDLSWMWPVRG
Trigger: GCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GGCTCACAGAGGCCCTCAGCTTTGGGGAAGCCCATGTTCTCCTGGTaGGGCCAGCCTCTCCCGGCCCTGGCTCCTGGGTTTCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: GSQRPSALGKPMFSW*GQPLPALAPGFPWG
Trigger: CCCCCAAGGAAACCCAGGAGCCAGGGCCGGGAGAGGCTGGCCCCACCAGGAGAACATGGGCTTCCCCAAAGCTGAGGGCCTCTGTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp ACTCCAAGTCCCACCCTTCACCTCGGGGCTTTGGCTGGTGGCTGGTaGGCTGCTCAGGTCCAGGGCTGGCTTCCTGGGCTGGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: TPSPTLHLGALAGGW*AAQVQGWLPGLAAA
Trigger: AGCAGCTGCCAGCCCAGGAAGCCAGCCCTGGACCTGAGCAGCCCACCAGCCACCAGCCAAAGCCCCGAGGTGAAGGGTGGGACTTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CGCTGCTGCTGTTCTGGCCGAGCTGGGATTCATAAGAGGTGCTGGTaGGGTCCAAGGTGGGAGGCTGCGGTCGGCCACCTGGCTGGCGGT +
Preference number: 5 (lower is better)
Translates to: RCCCSGRAGIHKRCW*GPRWEAAVGHLAGG
Trigger: ACCGCCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACAGCAGCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CCTCGCTGCTGCTGTTCTGGCCGAGCTGGGATTCATAAGAGGTGCTaGTGGGGTCCAAGGTGGGAGGCTGCGGTCGGCCACCTGGCTGGC +
Preference number: 5 (lower is better)
Translates to: PRCCCSGRAGIHKRC*WGPRWEAAVGHLAG
Trigger: GCCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACAGCAGCAGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTTGCAGCCCGTaGCCCAGCACACAGAACTCTGGGGGAGATGCACGCCTGGTGCCG +
Preference number: 5 (lower is better)
Translates to: DLSWMWPVRGSGCSP*PSTQNSGGDARLVP
Trigger: CGGCACCAGGCGTGCATCTCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TCCCTGGCCCTGTGCTGTGAGGCTTGGTCAGGCTGGCGGTGCTCTTaGTGGGCAGCAAGTCCAGGGGGCTCACAGAGGCCCTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLALCCEAWSGWRCS*WAASPGGSQRPSAL
Trigger: CAAAGCTGAGGGCCTCTGTGAGCCCCCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCCTGACCAAGCCTCACAGCACAGGGCCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TCTGGCTGGGATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTTaGAGCCCGTGGCCCAGCACACAGAACTCTGGGGGAGATGCACGC +
Preference number: 5 (lower is better)
Translates to: SGWDLSWMWPVRGSG*SPWPSTQNSGGDAR
Trigger: GCGTGCATCTCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TGCGTGAGTGTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTaGTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTGGATGTGGCCG +
Preference number: 5 (lower is better)
Translates to: CVSVAPSSACQDTSS*WGCASGWDLSWMWP
Trigger: CGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCACACTCACGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp AGAGGTGCTGGTGGGGTCCAAGGTGGGAGGCTGCGGTCGGCCACCTaGCTGGCGGTCAGAAGCTGTCCTCCTGAGGAAAGGCAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RGAGGVQGGRLRSAT*LAVRSCPPEERQRV
Trigger: AACCCTCTGCCTTTCCTCAGGAGGACAGCTTCTGACCGCCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp TCTGGCCGAGCTGGGATTCATAAGAGGTGCTGGTGGGGTCCAAGGTaGGAGGCTGCGGTCGGCCACCTGGCTGGCGGTCAGAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SGRAGIHKRCWWGPR*EAAVGHLAGGQKLS
Trigger: GGACAGCTTCTGACCGCCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CTCGTCAGCCTGTCAGGACACCTCCTCTTGCTGGGGCTGCGCCTCTaGCTGGGATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTTG +
Preference number: 5 (lower is better)
Translates to: LVSLSGHLLLLGLRL*LGFVLDVAGPRLRL
Trigger: CAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GTGAGTGTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTGCTaGGGCTGCGCCTCTGGCTGGGATTTGTCCTGGATGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: VSVAPSSACQDTSSC*GCASGWDLSWMWPV
Trigger: GACCGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCACACTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TCTCCTCGCTGCTGCTGTTCTGGCCGAGCTGGGATTCATAAGAGGTaGTGGTGGGGTCCAAGGTGGGAGGCTGCGGTCGGCCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: SPRCCCSGRAGIHKR*WWGPRWEAAVGHLA
Trigger: AGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACAGCAGCAGCGAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp AGGTCCTGTTTTGTCCAGATGGAGGGCCGGAGTGGTGCCAGGCGATaGCCTTCCGGGGCTGCCTGTAGAGGCTGGTGGCCTTCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: RSCFVQMEGRSGARR*PSGAACRGWWPSLP
Trigger: AGGCAGAGAAGGCCACCAGCCTCTACAGGCAGCCCCGGAAGGCCATCGCCTGGCACCACTCCGGCCCTCCATCTGGACAAAACAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAACCCTGCAGGTGCCATaGGGCCACACGGCGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGETLQVP*GHTAAA
Trigger: AGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGGT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTGGTCCGAGGCTCCGGTaGCAGCCCGTGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAGPRLR*QPVAQH
Trigger: GTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACC...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CTCCTGAAAGGTGGGGTCCTCCACGTGACTCTGGAGACACGACTCTaGCTGGGACCTCGTCTGCCTCTCAGGGGCCCTCCTGCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LLKGGVLHVTLETRL*LGPRLPLRGPPAAT
Trigger: AGTGGCAGCAGGAGGGCCCCTGAGAGGCAGACGAGGTCCCAGTCAGAGTCGTGTCTCCAGAGTCACGTGGAGGACCCCACCTTTCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp ACACAGAGCTGCTCTCCGCTGCGAGTCTGCTCTCAGCCAAGGCCCTaGGCTGTTCTTCCAGCATTCTGCTGGGTTCCCGAGAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: TQSCSPLRVCSQPRP*AVLPAFCWVPERAP
Trigger: GGGGGCCCTCTCGGGAACCCAGCAGAATGCTGGAAGAACAGCTCAGGGCCTTGGCTGAGAGCAGACTCGCAGCGGAGAGCAGCTCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GTTGCTTGGACTGACCCTGCAGGTGCCATTGGGCCACACGGCGGCTaGTCTGGGCTGCAGAATTTGCTCCTGGCTCTGCCCCTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: VAWTDPAGAIGPHGG*SGLQNLLLALPLPF
Trigger: AAAGGGCAGGGGCAGAGCCAGGAGCAAATTCTGCAGCCCAGAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGGTCAGTCCAAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CTGGGCAGGTCTGTAAGAGGAGGGAAGGCTCCGGCGCCTCTTGTCTaGTTGAGGCACCCAGTGTGTCCTCGTGGGAGAGGCCTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LGRSVRGGKAPAPLV*LRHPVCPRGRGLSA
Trigger: GGCAGAAAGGCCTCTCCCACGAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGGAGCCTTCCCTCCTCTTACAGACCTGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp GGCTGGACACTTGGCTGTCACACTTGGCCTTCTGGGGTGACTGCGTaGGTGTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GWTLGCHTWPSGVTA*VWPPRQPVRTPPLA
Trigger: AGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCACACTCACGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAGTGTCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CCCTGCACCCCAGGGTCGCCACAGCCACTCGCCAGGCTCTCTAGCTaGCTCAGAGCCCTCAGGAGGCGTTCATCCACATTCCTTTTTGTG +
Preference number: 5 (lower is better)
Translates to: PCTPGSPQPLARLSS*LRALRRRSSTFLFV
Trigger: CACAAAAAGGAATGTGGATGAACGCCTCCTGAGGGCTCTGAGGCAGCTAGAGAGCCTGGCGAGTGGCTGTGGCGACCCTGGGGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp AGAGGGCCCCCAGCCTCTGGCGGCAGCGATGGTGGGGTCAGTGGGTaGGCTGTTGAGAGTGGCGGTTTAGCTTCAAACAGAGAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: RGPPASGGSDGGVSG*AVESGGLASNREEV
Trigger: TACCTCCTCTCTGTTTGAAGCTAAACCGCCACTCTCAACAGCCCACCCACTGACCCCACCATCGCTGCCGCCAGAGGCTGGGGGCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACTGGACTTCCCTGCGTaGCCTGCAGTCCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGELDFPA*PAVQAA
Trigger: AGCTGCCTGGACTGCAGGCAACGCAGGGAAGTCCAG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp GTACTGGAGAGGCATGGGCTCCTTGCTTCGTCCTGTGCTCGTGGCTaGACCTTTGCCATAGGAGCCCCTGAGAGCAGGCAGTCCTGGGGT +
Preference number: 5 (lower is better)
Translates to: VLERHGLLASSCARG*TFAIGAPESRQSWG
Trigger: ACCCCAGGACTGCCTGCTCTCAGGGGCTCCTATGGCAAAGGTTCAGCCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CTCCCCTCCCTCTCCACAGCTCTGGGGTCTCCATGGTCGGGAAGATaGAAGCTGTGCTCCTCCAGAGTGGAGCTGGCCCGAGTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LPSLSTALGSPWSGR*KLCSSRVELARVRR
Trigger: TCTTCTCACTCGGGCCAGCTCCACTCTGGAGGAGCACAGCTTTCATCTTCCCGACCATGGAGACCCCAGAGCTGTGGAGAGGGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS CCA 90 bp GAAGTTCTTGGTGAGGGATGCCTTGAGCCTGCTGGTGGTGTTGCTTaGACTGACCCTGCAGGTGCCATTGGGCCACACGGCGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: EVLGEGCLEPAGGVA*TDPAGAIGPHGGCS
Trigger: AGAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAGCTGTTGCAGGAGATTaGGCTGCTCCTGGGGCTCTC +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEAVAGD*AAPGAL
Trigger: GAGAGCCCCAGGAGCAGCCAAATCTCCTGCAACAGC...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTCTTCACCTCGGGGCTTaGGCTGGTGGCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGLHLGA*AGGWWA
Trigger: AGCCCACCAGCCACCAGCCAAAGCCCCGAGGTGAAG...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGGTCCTCCCTTCCCCCTaGGGCAAAGGAAGTGGATTT +
Preference number: 5 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLVLPSP*GKGSGF
Trigger: AAATCCACTTCCTTTGCCCAAGGGGGAAGGGAGGAC...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CCTGCCCTTTGGCACCCAGGGCATAAAATGCCTCCAGCTTCTGACTaGGGTCCCTCTGGACCCTTCGCAGCTCCTGAAAGGTGGGGTCCT +
Preference number: 5 (lower is better)
Translates to: PALWHPGHKMPPASD*GPSGPFAAPERWGP
Trigger: AGGACCCCACCTTTCAGGAGCTGCGAAGGGTCCAGAGGGACCTCAGTCAGAAGCTGGAGGCATTTTATGCCCTGGGTGCCAAAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TGCCCAGCTTGTCCACCGACTGCACGGACTCATTGTCAGCACCAATaGCACTGTCCTCAGAGCATAAGGGGAGACCCTGCACCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: CPACPPTARTHCQHQ*HCPQSIRGDPAPQG
Trigger: ACCCTGGGGTGCAGGGTCTCCCCTTATGCTCTGAGGACAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGAGAGGCATGGGCTCCTaGCTTCGTCCTGTGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LLGNTMVSPAHCPGCLGLRGMGS*LRPVLV
Trigger: CACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCT...CAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGGGCACAGGGACAAACTaGATCCTTTCGCTGATTGAC +
Preference number: 5 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLGTGTN*ILSLID
Trigger: GTCAATCAGCGAAAGGATCAAGTTTGTCCCTGTGCC...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCAGGCTGGCGGTGCTCTaGCTGGGCAGCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFRLAVL*LGSKSR
Trigger: CCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCCT...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCCTGTCCTGGCACACGTaGGCCCCAAGCAAACGTGGA +
Preference number: 5 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCLSWHT*APSKRG
Trigger: TCCACGTTTGCTTGGGGCCAACGTGTGCCAGGACAG...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp ATCATTTCCTGGGCCTGGAGGCTCCTAAGCCTCCTGGTGCGGGCCTaGAATGGGCTTTCCCGGTCAGCAGGTGAAGATTGTGGCCTTGAA +
Preference number: 5 (lower is better)
Translates to: IISWAWRLLSLLVRA*NGLSRSAGEDCGLE
Trigger: TTCAAGGCCACAATCTTCACCTGCTGACCGGGAAAGCCCATTTCAGGCCCGCACCAGGAGGCTTAGGAGCCTCCAGGCCCAGGAAATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GGTGCAAGGTCCCAGCTGGTTTGCTTGCCCAGCTTGTCCACCGACTaGACGGACTCATTGTCAGCACCAATGCCACTGTCCTCAGAGCAT +
Preference number: 5 (lower is better)
Translates to: GARSQLVCLPSLSTD*TDSLSAPMPLSSEH
Trigger: ATGCTCTGAGGACAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp ACCGACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTaGTTGCCCAGCTTGTCCACCGACTGCACGGACTCATTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TDFHSSGSGARSQLV*LPSLSTDCTDSLSA
Trigger: TGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGTTGAGCACCTGCAGCTaGCTGACTGTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWLSTCS*LTVYCS
Trigger: GCTACAGTACACAGTCAGCAAGCTGCAGGTGCTCAA...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGATCGGCCTGGAGGTTTaGGAAAGGTGTGGTTCCACA +
Preference number: 5 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWIGLEV*ERCGST
Trigger: TGTGGAACCACACCTTTCCAAAACCTCCAGGCCGAT...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AACAGGAGCAAATGCGAGCAGACAGCTGGGTGTGTCCCTTTCCAGCAGAGGGGTCTTCCCAGCTTTGCCTaGTTCGTCCTCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: NRSKCEQTAGCVPFQQRGLPSFA*FVLRMG
Trigger: CCCCATCCTGAGGACGAACAAGGCAAAGCTGGGAAG...ACCCCTCTGCTGGAAAGGGACACACCCAGCTGTCTGCTCGCATTTGCTCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTGTGTTCCCAGACACTTaGGCTATGACTGCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: KEASWASPQLMAGSRVPCVFPDT*AMTAWL
Trigger: CAGCCAAGCAGTCATAGCCAAAGTGTCTGGGAACAC...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp ACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTGCTTaGCCAGCTTGTCCACCGACTGCACGGACTCATTGTCAGCACCAA +
Preference number: 5 (lower is better)
Translates to: TSILRALVQGPSWFA*PACPPTARTHCQHQ
Trigger: TTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CCTGAGCCCAAACAGAATGGACTTTGCTGCCAGGTGTGTCCTGACTaGCTGGCCTCTGTGTGGGGTGAAGTCACCGACTTCCATTCTTCG +
Preference number: 5 (lower is better)
Translates to: PEPKQNGLCCQVCPD*LASVWGEVTDFHSS
Trigger: CGAAGAATGGAAGTCGGTGACTTCACCCCACACAGAGGCCAGGCAGTCAGGACACACCTGGCAGCAAAGTCCATTCTGTTTGGGCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GGAGGTGATATTTTCTGGGCTTGTACTGGAGAGGCATGGGCTCCTTaGTTCGTCCTGTGCTCGTGGCTGAACCTTTGCCATAGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GGDIFWACTGEAWAP*FVLCSWLNLCHRSP
Trigger: GGGGCTCCTATGGCAAAGGTTCAGCCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTACAAGCCCAGAAAATATCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CCGGCCCTGGCTCCTGGGTTTCCTTGGGGGAGTTCTCTGTGGACTTaGTGCTTTCTGGGGACTCCAGAGAAGCGAATGATTTGTCCATCA +
Preference number: 5 (lower is better)
Translates to: PALAPGFPWGSSLWT*CFLGTPEKRMICPS
Trigger: TGATGGACAAATCATTCGCTTCTCTGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACTCCCCCAAGGAAACCCAGGAGCCAGGGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp TCCTGCAGGAGCACTTCTCCATCCTTGGAGATCTCCCCCAACAGCTaGCTGATCTCCTCAAAGCACAGCAGCAAGAAGCTGACCATGGGC +
Preference number: 5 (lower is better)
Translates to: SCRSTSPSLEISPNS*LISSKHSSKKLTMG
Trigger: GCCCATGGTCAGCTTCTTGCTGCTGTGCTTTGAGGAGATCAGCCAGCTGTTGGGGGAGATCTCCAAGGATGGAGAAGTGCTCCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp AAGTCACCGACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTaGTTTGCTTGCCCAGCTTGTCCACCGACTGCACGGACTCATTGT +
Preference number: 5 (lower is better)
Translates to: KSPTSILRALVQGPS*FACPACPPTARTHC
Trigger: ACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGTCGGTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAATGGGATGAAGAGGTTTaGGTTCCTGGGATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEWDEEV*VPGISP
Trigger: AGGACTGATCCCAGGAACCAAAACCTCTTCATCCCA...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCAAGCCTGCTGGTGGTGTaGCTTGGACTGACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSSLLVV*LGLTLQ
Trigger: CTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCT...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCGGCTCCTGGGTTTCCTaGGGGGAGTTCTCTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFGSWVS*GEFSVD
Trigger: GTCCACAGAGAACTCCCCCAAGGAAACCCAGGAGCC...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GTGTCCACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACCAGTTTAACAAGTTTTaGAGCCCACAGTCCCAGCAA +
Preference number: 5 (lower is better)
Translates to: VSTQQWVWLGSRIGWPGHQFNKF*SPQSQQ
Trigger: TTGCTGGGACTGTGGGCTCAAAAACTTGTTAAACTG...GTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGTGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AGCCAAAAACACATCTTTGACCCGCCTGCTCCTATGTCGGCTCAGCACTGCTTCCAGCAGAGGGGTGGGTaGTGGCCCCTCTTGGTAGTT +
Preference number: 5 (lower is better)
Translates to: SQKHIFDPPAPMSAQHCFQQRGG*WPLLVV
Trigger: AACTACCAAGAGGGGCCACAACCCACCCCTCTGCTG...GAAGCAGTGCTGAGCCGACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAACCTCACGTGCTTACCTaGGCCCCTGCCCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQPHVLT*APALPG
Trigger: CCCAGGCAGGGCAGGGGCCAAGGTAAGCACGTGAGG...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp AAGAAGCTGACCATGGGCTGCAGCAGCTCCCGGGTCTGGGTGGCCTaGTGGATGATGCACAGAATTGCTTCATATTTGGAGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KKLTMGCSSSRVWVA*WMMHRIASYLERLE
Trigger: CTCCAGCCTCTCCAAATATGAAGCAATTCTGTGCATCATCCATCAGGCCACCCAGACCCGGGAGCTGCTGCAGCCCATGGTCAGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TACTGGGCAACACAATGGTGTCACCAGCTCACTGTCCCGGCTGCCTGGGTCTGGGACATCCTGGCCGAATaGCTTTGGGCTTTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: YWATQWCHQLTVPAAWVWDILAE*LWAFSR
Trigger: TCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTC...CCAGACCCAGGCAGCCGGGACAGTGAGCTGGTGACACCATTGTGTTGCCCAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp AAGGAGGCATCATGGGCATCTCCACAGCTGATGGCAGGATCCCGGGTGCCCTGTTCCATATCTTTCCTTTaGCCTGAAGCAGGATCTCCC +
Preference number: 5 (lower is better)
Translates to: KEASWASPQLMAGSRVPCSISFL*PEAGSP
Trigger: GGGAGATCCTGCTTCAGGCAAAAGGAAAGATATGGA...ACAGGGCACCCGGGATCCTGCCATCAGCTGTGGAGATGCCCATGATGCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAACAGCCTATGCCCATTTaGAGAGATTCTCTGCCTGAT +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEQPMPI*RDSLPD
Trigger: ATCAGGCAGAGAATCTCTCAAAATGGGCATAGGCTG...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CCACGGCATGTGGAGAATGGGCTGCCTTGTTTGGGAGGCTTGGTTTACCCTACTCTCTGTCGGGCAAGTTaGCTGAACCTGGTCCATCCT +
Preference number: 5 (lower is better)
Translates to: PRHVENGLPCLGGLVYPTLCRAS*LNLVHP
Trigger: AGGATGGACCAGGTTCAGCAAACTTGCCCGACAGAG...AGTAGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCCACATGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCGCTGTACAGCTGGGTTaGCCCCTCCTGCCACCAGCA +
Preference number: 5 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCAVQLG*PLLPPA
Trigger: TGCTGGTGGCAGGAGGGGCAAACCCAGCTGTACAGC...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CTGTGCTCCTCCAGAGTGGAGCTGGCCCGAGTGAGAAGATGGGTATaGCATGTACCCCTTAGATTGATCTGTGGTGGGTTCCTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: LCSSRVELARVRRWV*HVPLRLICGGFLLL
Trigger: GAGAAGGAGGAACCCACCACAGATCAATCTAAGGGGTACATGTCATACCCATCTTCTCACTCGGGCCAGCTCCACTCTGGAGGAGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS GCA 90 bp GCGAATGATTTGTCCATCAGAACTTCCATAGGCGGTGGAGGGAGGTaGTCGAGGTTCCCCTCCATTTCACAGCTGAGCTCCTCACTCTTG +
Preference number: 5 (lower is better)
Translates to: ANDLSIRTSIGGGGR*SRFPSISQLSSSLL
Trigger: CAAGAGTGAGGAGCTCAGCTGTGAAATGGAGGGGAACCTCGAGCACCTCCCTCCACCGCCTATGGAAGTTCTGATGGACAAATCATTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GCCCTGGCTCCTGGGTTTCCTTGGGGGAGTTCTCTGTGGACTTGCTaGTTTCTGGGGACTCCAGAGAAGCGAATGATTTGTCCATCAGAA +
Preference number: 5 (lower is better)
Translates to: ALAPGFPWGSSLWTC*FLGTPEKRMICPSE
Trigger: TTCTGATGGACAAATCATTCGCTTCTCTGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACTCCCCCAAGGAAACCCAGGAGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GCTCCGGGAAGTCCACTTTGCCTTCAGGCTCATGAGCAGGGTGGATaGTTTGGTAGCAGTGGCTCTGTGTGCTTGACGTGTGACATTTTG +
Preference number: 5 (lower is better)
Translates to: APGSPLCLQAHEQGG*FGSSGSVCLTCDIL
Trigger: CAAAATGTCACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTGCTCATGAGCCTGAAGGCAAAGTGGACTTCCCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CAAAGGTGGGGAGGTGATATTTTCTGGGCTTGTACTGGAGAGGCATaGGCTCCTTGCTTCGTCCTGTGCTCGTGGCTGAACCTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: QRWGGDIFWACTGEA*APCFVLCSWLNLCH
Trigger: ATGGCAAAGGTTCAGCCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTACAAGCCCAGAAAATATCACCTCCCCACCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAACTGAATGCCACTCTTaGCAACGCTGTTTACAAGGT +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGETECHS*QRCLQG
Trigger: ACCTTGTAAACAGCGTTGCAAAGAGTGGCATTCAGT...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGTCCCAGCTGGTTTGCTaGCCCAGCTTGTCCACCGAC +
Preference number: 5 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLSQLVC*PSLSTD
Trigger: GTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGA...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACAATCACATGGGGTGCTaGTCCCCAGCTTCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHNHMGC*SPASKV
Trigger: CACCTTTGAAGCTGGGGACAAGCACCCCATGTGATT...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTACCCCAGTTTCACCCACTGTGTCCCACTCCAGTCTCCCTGCAGCTGGGGAAGTTTCAATAAGCTTCTaGACGGATGTTCTGGTGGGA +
Preference number: 5 (lower is better)
Translates to: GTPVSPTVSHSSLPAAGEVSISF*TDVLVG
Trigger: TCCCACCAGAACATCCGTCAAGAAGCTTATTGAAAC...TTCCCCAGCTGCAGGGAGACTGGAGTGGGACACAGTGGGTGAAACTGGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCGGGAAGTTCGCCGCTTaGTGGTGGGTGGGCTTAGCA +
Preference number: 5 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCGKFAA*WWVGLA
Trigger: TGCTAAGCCCACCCACCACAAAGCGGCGAACTTCCC...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAGCCTCTGGCTGGGATTaGTCCTGGATGTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQASGWD*SWMWPV
Trigger: GACCGGCCACATCCAGGACAAATCCCAGCCAGAGGC...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTCCTTCAGCCAGACACTaGAGGGGGCCTCTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCPSARH*RGPLPT
Trigger: TGTGGGGAGAGGCCCCCTCAAGTGTCTGGCTGAAGG...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCACCTTGTTTGGGAGGCTaGGTTTACCCTACTCCGTCG +
Preference number: 5 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSPCLGG*VYPTPS
Trigger: CGACGGAGTAGGGTAAACCAAGCCTCCCAAACAAGG...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACCCAGCAGTGGGTGTGGCTTGGCTCTAGAATCGGCTGGCCTGGGCACTGCCTGCAACTGTTTTTCACTTaGATTTCGACTCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: TQQWVWLGSRIGWPGHCLQLFFT*ISTPAE
Trigger: TTCTGCTGGAGTCGAAATCAAAGTGAAAAACAGTTG...CAGGCAGTGCCCAGGCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGCTGGAGACTCAGCCTaGCTTCCCCTCACTGCTGGA +
Preference number: 5 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTAGDSA*LPLTAG
Trigger: TCCAGCAGTGAGGGGAAGCAAGGCTGAGTCTCCAGC...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CTGGTGCCCACAGGGCACAGGGACAAACTTGATCCTTTCGCTGATTaGCTCCTTCATCTTCAGAATCATTTCCTGGGCCTGGAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LVPTGHRDKLDPFAD*LLHLQNHFLGLEAP
Trigger: AGGAGCCTCCAGGCCCAGGAAATGATTCTGAAGATGAAGGAGTCAATCAGCGAAAGGATCAAGTTTGTCCCTGTGCCCTGTGGGCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GCTGCCTCAGAGCCCTCAGGAGGCGTTCATCCACATTCCTTTTTGTaGTCAGCTTATTTTCCAAGTGGGTTGCAGTGGAGTGGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: AASEPSGGVHPHSFL*SAYFPSGLQWSGGS
Trigger: GCTACCTCCACTCCACTGCAACCCACTTGGAAAATAAGCTGAGCACAAAAAGGAATGTGGATGAACGCCTCCTGAGGGCTCTGAGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp GCTCTTGTCCTGACTAGGCAAAATACTGAAGTTCTTGGTGAGGGATaGCTTGAGCCTGCTGGTGGTGTTGCTTGGACTGACCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ALVLTRQNTEVLGEG*LEPAGGVAWTDPAG
Trigger: ACCTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAACTTCAGTATTTTGCCTAGTCAGGACAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CTGACTGTGTACTGTAGCAGCTGTTGCAGGAGATTTGGCTGCTCCTaGGGCTCTCTTTTCTTCAAAGGCCAAGCCAGATCCTCCCTGACT +
Preference number: 5 (lower is better)
Translates to: LTVYCSSCCRRFGCS*GSLFFKGQARSSLT
Trigger: AGTCAGGGAGGATCTGGCTTGGCCTTTGAAGAAAAGAGAGCCCCAGGAGCAGCCAAATCTCCTGCAACAGCTGCTACAGTACACAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGTTTGCTTGCCCAGCTaGTCCACCGACTGCACGGAC +
Preference number: 5 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPVCLPS*STDCTD
Trigger: GTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAAC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TGCTCCAAGGCAGACTCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTAAGGTCCCAGCTGGTTaGCTTGCCCAGCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: CSKADSSLWKTWSLGGKTKVPAG*LAQLVH
Trigger: GTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTT...AGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACGAGTTCTCTGTGGACTaGCTGCTTTCTGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDEFSVD*LLSGDS
Trigger: GGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACTC...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CAGCCTTCTCATTTTGGGAGCCATGCACTTCTAAACAAAGCTCTCAATAGGGACTCTCTCGGCTCTGCCTaGGTCTGGCCAGGCTGGACT +
Preference number: 5 (lower is better)
Translates to: QPSHFGSHALLNKALNRDSLGSA*VWPGWT
Trigger: AGTCCAGCCTGGCCAGACCAAGGCAGAGCCGAGAGA...GTCCCTATTGAGAGCTTTGTTTAGAAGTGCATGGCTCCCAAAATGAGAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGAGGAAAGGCAGAGGGTaGAGGGCACACAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLRKGRG*RAHRAA
Trigger: AGCAGCTCTGTGTGCCCTCAACCCTCTGCCTTTCCT...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTGGAGGATCGTCCCTTTGCTGTACCCCAGTGGGTAAGAATTCTTGTCTTTTGCGGTCAGGCTGGACACTaGGCTGTCACACTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LEDRPFAVPQWVRILVFCGQAGH*AVTLGL
Trigger: AAGGCCAAGTGTGACAGCCAAGTGTCCAGCCTGACC...GCAAAAGACAAGAATTCTTACCCACTGGGGTACAGCAAAGGGACGATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCTAGTCTCAGACAGCCTCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCAGGAGAATGGGCTGCCTaGTTTGGGAGGCTTGGTTTA +
Preference number: 5 (lower is better)
Translates to: SSLRQPPAMHAHGKHRCSGEWAA*FGRLGL
Trigger: TAAACCAAGCCTCCCAAACAAGGCAGCCCATTCTCC...TGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGAGGCTGTCTGAGACTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TTCATCCACATTCCTTTTTGTGCTCAGCTTATTTTCCAAGTGGGTTaGAGTGGAGTGGAGGTAGCTGCTGGAGCCCTCCAGGAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: FIHIPFCAQLIFQVG*SGVEVAAGALQEAA
Trigger: GGCAGCTTCCTGGAGGGCTCCAGCAGCTACCTCCACTCCACTGCAACCCACTTGGAAAATAAGCTGAGCACAAAAAGGAATGTGGATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAAAGTGGCTCTGTGTGCTaGACGTGTGACATTTTGCTG +
Preference number: 5 (lower is better)
Translates to: IPDPSCVFSMILTPSVVESGSVC*TCDILL
Trigger: CAGCAAAATGTCACACGTCAAGCACACAGAGCCACT...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGTAGAAGGGAGATGGTGGGCGTGAGCAGCCCTTGTCTGAGAAGCTGTACAGCTCCAGCAAGAATGGGTTaGAGGTCTATAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: GRREMVGVSSPCLRSCTAPARMG*RSIITP
Trigger: TGGGGTAATTATAGACCTCAAACCCATTCTTGCTGG...AGCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCCACCATCTCCCTTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACACTGTGTGTCTCCTGCTCACTCAGCTCAGTGCCCAGCTTACCTAAGGCTCACATGTGGCTTTGTGATTaGTTCAGCTGGGATGAAGAG +
Preference number: 5 (lower is better)
Translates to: TLCVSCSLSSVPSLPKAHMWLCD*FSWDEE
Trigger: CTCTTCATCCCAGCTGAACAAATCACAAAGCCACAT...GTGAGCCTTAGGTAAGCTGGGCACTGAGCTGAGTGAGCAGGAGACACACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAAGCAGGGTGGATGGTTaGGTAGCAGTGGCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQSRVDG*VAVALC
Trigger: ACACAGAGCCACTGCTACCAAACCATCCACCCTGCT...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAGACTGCACGGACTCATaGTCAGCACCAATGCCACTG +
Preference number: 5 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQDCTDS*SAPMPL
Trigger: CAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTC...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGGAAGCTTCCCAGCTTaGCCTTGTTCGTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPGSFPA*PCSSSG
Trigger: TCCTGAGGACGAACAAGGCAAAGCTGGGAAGCTTCC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGCGCCTCTTGTCTGCTaGAGGCACCCAGTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGAPLVC*RHPVCP
Trigger: AGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTGGAGGGTTGGGCAACTaGGGCTGGTGCGGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFGGLGN*GWCGGE
Trigger: TTCCCCACCGCACCAGCCCAAGTTGCCCAACCCTCC...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp CCTTCCATATCTTTCCTTTTGCCTGAAGCAGGATCTCCCATGAGCTaGCAAAGACCTTTAGCTGTGGTTTGGTTCCTCCTGGGACTTGGC +
Preference number: 5 (lower is better)
Translates to: PSISFLLPEAGSPMS*QRPLAVVWFLLGLG
Trigger: GCCAAGTCCCAGGAGGAACCAAACCACAGCTAAAGGTCTTTGTCAGCTCATGGGAGATCCTGCTTCAGGCAAAAGGAAAGATATGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp AGGGATGGAACCTCTTTCACTTCCGCCCTGACATCCTGGCCGAATTaGTTTGGGCTTTTTCAAGAACTGAATGCCACTCTTTGCAACGCT +
Preference number: 5 (lower is better)
Translates to: RDGTSFTSALTSWPN*FGLFQELNATLCNA
Trigger: AGCGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCATCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCAAGTTTGTGGAAGACCTGGTCTCTAGGAGGCAAAACTGACCAGATGCCACAAACCTTTAGCTGTGGTTaGGTTCCTCCTGGGACTTGG +
Preference number: 5 (lower is better)
Translates to: SSLWKTWSLGGKTDQMPQTFSCG*VPPGTW
Trigger: CCAAGTCCCAGGAGGAACCAAACCACAGCTAAAGGT...TTGTGGCATCTGGTCAGTTTTGCCTCCTAGAGACCAGGTCTTCCACAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGTGGGAACCCTGTGTCTaGAACGGAATATCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLWEPCV*NGISLA
Trigger: GGCTAAGGATATTCCGTTCAAGACACAGGGTTCCCA...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGTCCTCAGGATGGGGATaGCATTTCTGCAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLSSGWG*HFCKML
Trigger: GAGCATCTTGCAGAAATGCAATCCCCATCCTGAGGA...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCAGAGGCCCTCAGCTTaGGGGAAGCCCATGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTQRPSA*GKPMFS
Trigger: GGAGAACATGGGCTTCCCCAAAGCTGAGGGCCTCTG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACAACAAAGAAGCTTTGCGACCATTTGCGCACCCATGTCTGCTTTAGGCAGGTGCTCTCAATAGGGACTTaGTCAATGCTGTGCCGCTAC +
Preference number: 5 (lower is better)
Translates to: TTKKLCDHLRTHVCFRQVLSIGT*SMLCRY
Trigger: GTAGCGGCACAGCATTGACAAAGTCCCTATTGAGAG...CACCTGCCTAAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTTCTTTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TCCTGCCATGCATGCTCACGGAAAGCACCGTTGTTCATTCCGGACCCTTCCTGCTTTAAGTTTACAGCATaGAAACTGAGCTTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: SCHACSRKAPLFIPDPSCFKFTA*KLSLGR
Trigger: CCTTCCCAAGCTCAGTTTCAATGCTGTAAACTTAAA...GCAGGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGAGCATGCATGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCGGGCGTGAGCAGCCCTaGTCTGAGAAGCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTGREQP*SEKLYS
Trigger: GCTGTACAGCTTCTCAGACAAGGGCTGCTCACGCCC...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp TCGTCCTCAGGATGGGGATTGCATTTCTGCAAGATGCTCTTGTCCTaGCTAGGCAAAATACTGAAGTTCTTGGTGAGGGATGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SSSGWGLHFCKMLLS*LGKILKFLVRDALS
Trigger: GCTCAAGGCATCCCTCACCAAGAACTTCAGTATTTTGCCTAGTCAGGACAAGAGCATCTTGCAGAAATGCAATCCCCATCCTGAGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CAGGCTCATGAGCAGGGTGGATGGTTTGGTAGCAGTGGCTCTGTGTaGTTGACGTGTGACATTTTGCTGTCCTTTTCCATTTGGAAGTAT +
Preference number: 5 (lower is better)
Translates to: QAHEQGGWFGSSGSV*LTCDILLSFSIWKY
Trigger: ATACTTCCAAATGGAAAAGGACAGCAAAATGTCACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTGCTCATGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp AACCAGCAAAGGGATGGAACCTCTTTCACTTCCGCCCTGACATCCTaGCCGAATTGCTTTGGGCTTTTTCAAGAACTGAATGCCACTCTT +
Preference number: 5 (lower is better)
Translates to: NQQRDGTSFTSALTS*PNCFGLFQELNATL
Trigger: AAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCATCCCTTTGCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CTTTCCTCACTCTCATCTCCAGAAAAGTCTGCCCCTTGTGATCCATaGGAACCCTGTGTCTTGAACGGAATATCCTTAGCCATGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LSSLSSPEKSAPCDP*EPCVLNGISLAMWL
Trigger: AAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGGTTCCCATGGATCACAAGGGGCAGACTTTTCTGGAGATGAGAGTGAGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp CCTATGCCCATTTTGAGAGATTCTCTGCCTGATGCTGGAGAAATTTaGGGCTTCGGATACAAAGGGGCAAGCCCTGTGTACTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: PMPILRDSLPDAGEI*GFGYKGASPVYLGN
Trigger: ATTTCCCAAGTACACAGGGCTTGCCCCTTTGTATCCGAAGCCCCAAATTTCTCCAGCATCAGGCAGAGAATCTCTCAAAATGGGCATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATTCCGGACCCTTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATTGACGTGTGACATTTaGCTGTCCTTTTCCATTTGG +
Preference number: 5 (lower is better)
Translates to: IPDPSCVFSMILTPSVVELTCDI*LSFSIW
Trigger: CCAAATGGAAAAGGACAGCAAAATGTCACACGTCAA...TTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAAGGGTCCGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTTACTCAGAGTCATAGCCTCTCTCTGGGGGAGGTTGCTATAGTCCCTAGGGACAAAATACTGAAGTTCTaGGTGAGGGATGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: FTQSHSLSLGEVAIVPRDKILKF*VRDALS
Trigger: GCTCAAGGCATCCCTCACCAAGAACTTCAGTATTTT...GTCCCTAGGGACTATAGCAACCTCCCCCAGAGAGAGGCTATGACTCTGAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTAAGCTTTGCGACCATTaGCGCACCCATGTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LTAGVAPLHIPVPVMKMCKLCDH*RTHVCF
Trigger: AAAGCAGACATGGGTGCGCAAATGGTCGCAAAGCTT...ACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAGACCTGGGAATAAAGTaGGCCAAGAAGCCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGDLGIK*AKKPPR
Trigger: CCTCGGAGGCTTCTTGGCCAACTTTATTCCCAGGTC...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp TTCCTGCGTGTTCTCCATGATACTGACCCCTTCTGTGGTGGAATAATCTGCCTGCCCATTGAGCCGGCATaGAATCACTCAATTACTGCA +
Preference number: 5 (lower is better)
Translates to: FLRVLHDTDPFCGGIICLPIEPA*NHSITA
Trigger: TGCAGTAATTGAGTGATTCAATGCCGGCTCAATGGG...CAGGCAGATTATTCCACCACAGAAGGGGTCAGTATCATGGAGAACACGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTAGCAGTGGGTGTGGCTaGGCTCTAGAATCGGCTGGC +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFSSGCG*ALESAG
Trigger: GCCAGCCGATTCTAGAGCCAAGCCACACCCACTGCT...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp CTGTTTTTCACTTTGATTTCGACTCCAGCAGAAGTTCTGCAAGATGACCTGGGATCACGGAAAGCACCGTaGTTCATTCCGGACCCTTCC +
Preference number: 5 (lower is better)
Translates to: LFFTLISTPAEVLQDDLGSRKAP*FIPDPS
Trigger: GGAAGGGTCCGGAATGAACAACGGTGCTTTCCGTGA...TCCCAGGTCATCTTGCAGAACTTCTGCTGGAGTCGAAATCAAAGTGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTGCCAAAAACACATCTTaGACCCGCCTGCTCCTATGT +
Preference number: 5 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPAKNTS*TRLLLC
Trigger: ACATAGGAGCAGGCGGGTCAAAGATGTGTTTTTGGC...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp CCTGACATCCTGGCCGAATTGCTTTGGGCTTTTTCAAGAACTGAATaGCACTCTTTGCAACGCTGTTTACAAGGTCACTGTGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PDILAELLWAFSRTE*HSLQRCLQGHCVKV
Trigger: CACCTTCACACAGTGACCTTGTAAACAGCGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 90 bp TGGGCAGAATATGGAATGTGTGTTCCCAGACACTTTGGCTATGACTaGTTGGCTGTCTTCAGAGTCTCTTGTTTCCTTGTGCTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: WAEYGMCVPRHFGYD*LAVFRVSCFLVLLR
Trigger: TCTCAGGAGCACAAGGAAACAAGAGACTCTGAAGACAGCCAAGCAGTCATAGCCAAAGTGTCTGGGAACACACATTCCATATTCTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp TGGAACCTCTTTCACTTCCGCCCTGACATCCTGGCCGAATTGCTTTaGGCTTTTTCAAGAACTGAATGCCACTCTTTGCAACGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: WNLFHFRPDILAELL*AFSRTECHSLQRCL
Trigger: TAAACAGCGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAATCAGGCCAGAATTCTTaGAAGTCCATGGTACAATAT +
Preference number: 5 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNESGQNS*KSMVQY
Trigger: ATATTGTACCATGGACTTCAAAGAATTCTGGCCTGA...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCCTGAGCTCCTCACTCTaGGCTGCTTCTGCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTLSSSL*AASALG
Trigger: GCCTAAAGCAGAAGCAGCCAAGAGTGAGGAGCTCAG...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTAATGGGCTGCCTTGTTaGGGAGGCTTGGTTTACCCT +
Preference number: 5 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGNGLPC*GGLVYP
Trigger: AGGGTAAACCAAGCCTCCCAAACAAGGCAGCCCATT...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GATCCATGGGAACCCTGTGTCTTGAACGGAATATCCTTAGCCATGTaGCTTTGTGATTTGTTCAGCTGGGATGAAGAGGTTTTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: DPWEPCVLNGISLAM*LCDLFSWDEEVLVP
Trigger: AGGAACCAAAACCTCTTCATCCCAGCTGAACAAATCACAAAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGGTTCCCATGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTAGCACTTCTCCATCCTaGGAGATCTCCCCCAACAGC +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFSTSPS*EISPNS
Trigger: GCTGTTGGGGGAGATCTCCAAGGATGGAGAAGTGCT...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GCTTCCCCTCACTGCTGGAGTGGCTCCACTTCATATCCCGGTTCCAGTAATGAAGTTCTTTGGGTGCCTTaGAATAATAATTGGACAAGT +
Preference number: 5 (lower is better)
Translates to: ASPHCWSGSTSYPGSSNEVLWVP*NNNWTS
Trigger: ACTTGTCCAATTATTATTCAAAGGCACCCAAAGAAC...TTCATTACTGGAACCGGGATATGAAGTGGAGCCACTCCAGCAGTGAGGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGCAAAGGAAGTGGATTaGGCCCAGCAAGGATACCAT +
Preference number: 5 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGAKEVD*AQQGYH
Trigger: ATGGTATCCTTGCTGGGCCAAATCCACTTCCTTTGC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GGAACCAGCTTTCTTTATTTTCTTGGTCCAAATGTGAAGAGGGAGTaGTACCTGTCGTCCTGTTGTTGTTCTAAGTTTGGAACCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GTSFLYFLGPNVKRE*YLSSCCCSKFGTLC
Trigger: GCAGAGGGTTCCAAACTTAGAACAACAACAGGACGACAGGTACCACTCCCTCTTCACATTTGGACCAAGAAAATAAAGAAAGCTGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCTGATGGGATGGCATTaGGAAGCTTCCCAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFLMGWH*EASQLC
Trigger: GCAAAGCTGGGAAGCTTCCAAATGCCATCCCATCAG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTGCATTGAAACTGAGCTaGGGAAGGAGGAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFALKLS*GRRRGQ
Trigger: CTGTCCTCTCCTCCTTCCCAAGCTCAGTTTCAATGC...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTCAAATATCTAGCTCATaGGCAGAAGCAGGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPQISSS*AEAGFW
Trigger: CCAAAAACCTGCTTCTGCCAATGAGCTAGATATTTG...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 90 bp GGCTCTGTGTGCTTGACGTGTGACATTTTGCTGTCCTTTTCCATTTaGAAGTATCTTGGGTACTACTTTCCTCACTCTCATCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: GSVCLTCDILLSFSI*KYLGYYFPHSHLQK
Trigger: TTTCTGGAGATGAGAGTGAGGAAAGTAGTACCCAAGATACTTCCAAATGGAAAAGGACAGCAAAATGTCACACGTCAAGCACACAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCAAGGCAGACTCAAGTTaGTGGAAGACCTGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTKADSS*WKTWSL
Trigger: TAGAGACCAGGTCTTCCACAAACTTGAGTCTGCCTT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp GGCTCCACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTGCTGTCCTTTTCCATTaGGAAGTATCTTGGGTACTA +
Preference number: 5 (lower is better)
Translates to: GSTSYPGSSNENVYNSWGAVLFH*EVSWVL
Trigger: TAGTACCCAAGATACTTCCAAATGGAAAAGGACAGC...ACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGTGGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTCCAGCAGAAGTTCTGCAAGATGACCTGGGAATAAAGTTGGCCAAGAAGCCTCATCTGTGCAAAATTTaGCTCTATTCTCTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: TPAEVLQDDLGIKLAKKPHLCKI*LYSLLS
Trigger: GCTAAGAAGAGAATAGAGCAAAATTTTGCACAGATG...AGGCTTCTTGGCCAACTTTATTCCCAGGTCATCTTGCAGAACTTCTGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ATAGGGACTTTGTCAATGCTGTGCCGCTACTTAACCTTACAACAAAGAAGCTTTCCATTTGGAAGTATCTaGGGTACTACTTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: IGTLSMLCRYLTLQQRSFPFGSI*GTTFLT
Trigger: AGTGAGGAAAGTAGTACCCAAGATACTTCCAAATGG...AAAGCTTCTTTGTTGTAAGGTTAAGTAGCGGCACAGCATTGACAAAGTCCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS-3UTR CAA 90 bp ACTTCATATCCCGGTTCCAGTAATGAAAATGTGTATAATTCCTGGGGTTCCACCAGAGAAGCGAATGATTaGTCCATCAGAACTTCCATA +
Preference number: 5 (lower is better)
Translates to: TSYPGSSNENVYNSWGSTREAND*SIRTSI
Trigger: TATGGAAGTTCTGATGGACAAATCATTCGCTTCTCT...GGTGGAACCCCAGGAATTATACACATTTTCATTACTGGAACCGGGATATGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 90 bp GCAATCTTACTAGTCCATCCAGGCAATTTTCAGGCCAGAATTCTTTaGAGTCCATGGTACAATATCCTAAACTTGGAACCAGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: AILLVHPGNFQARIL*SPWYNILNLEPAFF
Trigger: AAAGAAAGCTGGTTCCAAGTTTAGGATATTGTACCATGGACTTCAAAGAATTCTGGCCTGAAAATTGCCTGGATGGACTAGTAAGATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp CCCTGCAGGTGCCATTGGGCCACACGGCGGCTGCTCTaGGCTGCAGAATTTGCTCCTGGCTCTGCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: PCRCHWATRRLL*AAEFAPGSAPA
Trigger: GGCAGGGGCAGAGCCAGGAGCAAATTCTGCAGCCCAGAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp CACTCCCTGGCCCTGTGCTGTGAGGCTTGGTCAGGCTaGCGGTGCTCTTGCTGGGCAGCAAGTCCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: HSLALCCEAWSG*RCSCWAASPGG
Trigger: GCCCCCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCCTGACCAAGCCTCACAGCACAGGGCCAGGGAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TGGATGTGGCCGGTCCGAGGCTCCGGTTGCAGCCCGTaGCCCAGCACACAGAACTCTGGGGGAGATGCACGC +
Preference number: 6 (lower is better)
Translates to: WMWPVRGSGCSP*PSTQNSGGDAR
Trigger: GCGTGCATCTCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TCTTGCTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTaGATGTGGCCGGTCCGAGGCTCCGGTTGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: SCWGCASGWDLS*MWPVRGSGCSP
Trigger: CGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CTGTGCTGTGAGGCTTGGTCAGGCTGGCGGTGCTCTTaGTGGGCAGCAAGTCCAGGGGGCTCACAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LCCEAWSGWRCS*WAASPGGSQRP
Trigger: GGGCCTCTGTGAGCCCCCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCCTGACCAAGCCTCACAGCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CAGCCCGTGGCCCAGCACACAGAACTCTGGGGGAGATaGACGCCTGGTGCCGCCCTGCAGTTCAGGGGAACA +
Preference number: 6 (lower is better)
Translates to: QPVAQHTELWGR*TPGAALQFRGT
Trigger: TGTTCCCCTGAACTGCAGGGCGGCACCAGGCGTGCATCTCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp GTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTaGTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VAPSSACQDTSS*WGCASGWDLSW
Trigger: CCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GCCAGGCGATGGCCTTCCGGGGCTGCCTGTAGAGGCTaGTGGCCTTCTCTGCCTGACTCCAAGTCCCACCCT +
Preference number: 6 (lower is better)
Translates to: ARRWPSGAACRG*WPSLPDSKSHP
Trigger: AGGGTGGGACTTGGAGTCAGGCAGAGAAGGCCACCAGCCTCTACAGGCAGCCCCGGAAGGCCATCGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GCTGGGATTCATAAGAGGTGCTGGTGGGGTCCAAGGTaGGAGGCTGCGGTCGGCCACCTGGCTGGCGGTCAG +
Preference number: 6 (lower is better)
Translates to: AGIHKRCWWGPR*EAAVGHLAGGQ
Trigger: CTGACCGCCAGCCAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp GGATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTaGCAGCCCGTGGCCCAGCACACAGAACTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: GFVLDVAGPRLR*QPVAQHTELWG
Trigger: CCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CTCTGGCTGGGATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTaGCAGCCCGTGGCCCAGCACACAGAACTCTGGGGGAGATGCACG +
Preference number: 6 (lower is better)
Translates to: LWLGFVLDVAGPRLR*QPVAQHTELWGRCT
Trigger: CGTGCATCTCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATCCCAGCCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CTGCGTGAGTGTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTaGCTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTGGATGTGGCC +
Preference number: 6 (lower is better)
Translates to: LRECGPLVSLSGHLL*LGLRLWLGFVLDVA
Trigger: GGCCACATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCACACTCACGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp GGTGGGGTCCTCCACGTGACTCTGGAGACACGACTCTaGCTGGGACCTCGTCTGCCTCTCAGGGGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: GGVLHVTLETRL*LGPRLPLRGPP
Trigger: AGGAGGGCCCCTGAGAGGCAGACGAGGTCCCAGTCAGAGTCGTGTCTCCAGAGTCACGTGGAGGACCCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp ACTGACCCTGCAGGTGCCATTGGGCCACACGGCGGCTaGTCTGGGCTGCAGAATTTGCTCCTGGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: TDPAGAIGPHGG*SGLQNLLLALP
Trigger: GGGCAGAGCCAGGAGCAAATTCTGCAGCCCAGAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGGTCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp GATTTGTCCTGGATGTGGCCGGTCCGAGGCTCCGGTTaGAGCCCGTGGCCCAGCACACAGAACTCTGGGGGA +
Preference number: 6 (lower is better)
Translates to: DLSWMWPVRGSG*SPWPSTQNSGG
Trigger: TCCCCCAGAGTTCTGTGTGCTGGGCCACGGGCTGCAACCGGAGCCTCGGACCGGCCACATCCAGGACAAATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TGCTGTGAGGCTTGGTCAGGCTGGCGGTGCTCTTGCTaGGCAGCAAGTCCAGGGGGCTCACAGAGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: CCEAWSGWRCSC*AASPGGSQRPS
Trigger: TGAGGGCCTCTGTGAGCCCCCTGGACTTGCTGCCCAGCAAGAGCACCGCCAGCCTGACCAAGCCTCACAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTTGCTaGGGCTGCGCCTCTGGCTGGGATTTGTCCTGGATG +
Preference number: 6 (lower is better)
Translates to: APSSACQDTSSC*GCASGWDLSWM
Trigger: CATCCAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TGTGGCCCCCTCGTCAGCCTGTCAGGACACCTCCTCTaGCTGGGGCTGCGCCTCTGGCTGGGATTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: CGPLVSLSGHLL*LGLRLWLGFVL
Trigger: CAGGACAAATCCCAGCCAGAGGCGCAGCCCCAGCAAGAGGAGGTGTCCTGACAGGCTGACGAGGGGGCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CCAGGGTCGCCACAGCCACTCGCCAGGCTCTCTAGCTaGCTCAGAGCCCTCAGGAGGCGTTCATCCACATTC +
Preference number: 6 (lower is better)
Translates to: PGSPQPLARLSS*LRALRRRSSTF
Trigger: GAATGTGGATGAACGCCTCCTGAGGGCTCTGAGGCAGCTAGAGAGCCTGGCGAGTGGCTGTGGCGACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TGCTGCTGTTCTGGCCGAGCTGGGATTCATAAGAGGTaGTGGTGGGGTCCAAGGTGGGAGGCTGCGGTCGGC +
Preference number: 6 (lower is better)
Translates to: CCCSGRAGIHKR*WWGPRWEAAVG
Trigger: GCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GGTGAGGGATGCCTTGAGCCTGCTGGTGGTGTTGCTTaGACTGACCCTGCAGGTGCCATTGGGCCACACGGC +
Preference number: 6 (lower is better)
Translates to: GEGCLEPAGGVA*TDPAGAIGPHG
Trigger: GCCGTGTGGCCCAATGGCACCTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TGTTCTGGCCGAGCTGGGATTCATAAGAGGTGCTGGTaGGGTCCAAGGTGGGAGGCTGCGGTCGGCCACCTG +
Preference number: 6 (lower is better)
Translates to: CSGRAGIHKRCW*GPRWEAAVGHL
Trigger: CAGGTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TGCTGTTCTGGCCGAGCTGGGATTCATAAGAGGTGCTaGTGGGGTCCAAGGTGGGAGGCTGCGGTCGGCCAC +
Preference number: 6 (lower is better)
Translates to: CCSGRAGIHKRC*WGPRWEAAVGH
Trigger: GTGGCCGACCGCAGCCTCCCACCTTGGACCCCACCAGCACCTCTTATGAATCCCAGCTCGGCCAGAACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp GGCAGGTCTGTAAGAGGAGGGAAGGCTCCGGCGCCTCTTGTCTGCTaGAGGCACCCAGTGTGTCCTCGTGGGAGAGGCCTTTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: GRSVRGGKAPAPLVC*RHPVCPRGRGLSAH
Trigger: GTGGGCAGAAAGGCCTCTCCCACGAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGGAGCCTTCCCTCCTCTTACAGACCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TTGAGCCTGCTGGTGGTGTTGCTTGGACTGACCCTGCAGGTGCCATaGGGCCACACGGCGGCTGCTCTGGGCTGCAGAATTTGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LSLLVVLLGLTLQVP*GHTAAALGCRICSW
Trigger: CCAGGAGCAAATTCTGCAGCCCAGAGCAGCCGCCGTGTGGCCCAATGGCACCTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp CTTGGCTGTCACACTTGGCCTTCTGGGGTGACTGCGTaGGTGTGGCCCCCTCGTCAGCCTGTCAGGACACCT +
Preference number: 6 (lower is better)
Translates to: LGCHTWPSGVTA*VWPPRQPVRTP
Trigger: AGGTGTCCTGACAGGCTGACGAGGGGGCCACACTCACGCAGTCACCCCAGAAGGCCAAGTGTGACAGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TCTGTAAGAGGAGGGAAGGCTCCGGCGCCTCTTGTCTaGTTGAGGCACCCAGTGTGTCCTCGTGGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SVRGGKAPAPLV*LRHPVCPRGRG
Trigger: GCCTCTCCCACGAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGGAGCCTTCCCTCCTCTTACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp GTAAGAGGAGGGAAGGCTCCGGCGCCTCTTGTCTGCTaGAGGCACCCAGTGTGTCCTCGTGGGAGAGGCCTT +
Preference number: 6 (lower is better)
Translates to: VRGGKAPAPLVC*RHPVCPRGRGL
Trigger: AAGGCCTCTCCCACGAGGACACACTGGGTGCCTCAAGCAGACAAGAGGCGCCGGAGCCTTCCCTCCTCTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp TGGGCCTGGAGGCTCCTAAGCCTCCTGGTGCGGGCCTaGAATGGGCTTTCCCGGTCAGCAGGTGAAGATTGT +
Preference number: 6 (lower is better)
Translates to: WAWRLLSLLVRA*NGLSRSAGEDC
Trigger: ACAATCTTCACCTGCTGACCGGGAAAGCCCATTTCAGGCCCGCACCAGGAGGCTTAGGAGCCTCCAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp TGCTCTCCGCTGCGAGTCTGCTCTCAGCCAAGGCCCTaGGCTGTTCTTCCAGCATTCTGCTGGGTTCCCGAG +
Preference number: 6 (lower is better)
Translates to: CSPLRVCSQPRP*AVLPAFCWVPE
Trigger: CTCGGGAACCCAGCAGAATGCTGGAAGAACAGCTCAGGGCCTTGGCTGAGAGCAGACTCGCAGCGGAGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp CTCTCCACAGCTCTGGGGTCTCCATGGTCGGGAAGATaGAAGCTGTGCTCCTCCAGAGTGGAGCTGGCCCGA +
Preference number: 6 (lower is better)
Translates to: LSTALGSPWSGR*KLCSSRVELAR
Trigger: TCGGGCCAGCTCCACTCTGGAGGAGCACAGCTTTCATCTTCCCGACCATGGAGACCCCAGAGCTGTGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS CCA 72 bp CCAGCCTCTGGCGGCAGCGATGGTGGGGTCAGTGGGTaGGCTGTTGAGAGTGGCGGTTTAGCTTCAAACAGA +
Preference number: 6 (lower is better)
Translates to: PASGGSDGGVSG*AVESGGLASNR
Trigger: TCTGTTTGAAGCTAAACCGCCACTCTCAACAGCCCACCCACTGACCCCACCATCGCTGCCGCCAGAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp CCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTaGCTTGCCCAGCTTGTCCACCGACTGCACGGACTC +
Preference number: 6 (lower is better)
Translates to: PFFGLWCKVPAG*LAQLVHRLHGL
Trigger: GAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTGCTTaGCCAGCTTGTCCACCGACTGCACGGACTCATTGT +
Preference number: 6 (lower is better)
Translates to: LRALVQGPSWFA*PACPPTARTHC
Trigger: ACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTaGTTGCCCAGCTTGTCCACCGACTGCACGGACTCA +
Preference number: 6 (lower is better)
Translates to: HSSGSGARSQLV*LPSLSTDCTDS
Trigger: TGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp ACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTaGTTTGCTTGCCCAGCTTGTCCACCGACTGCACGG +
Preference number: 6 (lower is better)
Translates to: TSILRALVQGPS*FACPACPPTAR
Trigger: CCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp ATTCACTGCAGCGGCTCCCCTCCCTCTCCACAGCTCTaGGGTCTCCATGGTCGGGAAGATGAAAGCTGTGCT +
Preference number: 6 (lower is better)
Translates to: IHCSGSPPSPQL*GLHGREDESCA
Trigger: AGCACAGCTTTCATCTTCCCGACCATGGAGACCCCAGAGCTGTGGAGAGGGAGGGGAGCCGCTGCAGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS CAA 72 bp TCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTGCTaGCCCAGCTTGTCCACCGACTGCACGGACTCATTG +
Preference number: 6 (lower is better)
Translates to: SSGSGARSQLVC*PSLSTDCTDSL
Trigger: CAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTGCTTGCCCAGCTaGTCCACCGACTGCACGGACTCATTGTCAGCACCAATGCCACTG +
Preference number: 6 (lower is better)
Translates to: SSGSGARSQLVCLPS*STDCTDSLSAPMPL
Trigger: CAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CACCGACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTaGCTTGCCCAGCTTGTCCACCGACTGCACGGACTCATTGTCAGC +
Preference number: 6 (lower is better)
Translates to: HRLPFFGLWCKVPAG*LAQLVHRLHGLIVS
Trigger: GCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGTCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp ATACTGAAGTTCTTGGTGAGGGATGCCTTGAGCCTGCTGGTGGTGTaGCTTGGACTGACCCTGCAGGTGCCATTGGGCCACACGGCGGCT +
Preference number: 6 (lower is better)
Translates to: ILKFLVRDALSLLVV*LGLTLQVPLGHTAA
Trigger: AGCCGCCGTGTGGCCCAATGGCACCTGCAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAACTTCAGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp AAGCTGCCGGTGAGCGAGGCCACTGTGCCATTGAGCACCTGCAGCTaGCTGACTGTGTACTGTAGCAGCTGTTGCAGGAGATTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: KLPVSEATVPLSTCS*LTVYCSSCCRRFGC
Trigger: GCAGCCAAATCTCCTGCAACAGCTGCTACAGTACACAGTCAGCAAGCTGCAGGTGCTCAATGGCACAGTGGCCTCGCTCACCGGCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CAGCTGGTTTGCTTGCCCAGCTTGTCCACCGACTGCACGGACTCATaGTCAGCACCAATGCCACTGTCCTCAGAGCATAAGGGGAGACCC +
Preference number: 6 (lower is better)
Translates to: QLVCLPSLSTDCTDS*SAPMPLSSEHKGRP
Trigger: GGGTCTCCCCTTATGCTCTGAGGACAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp GACTTCCATTCTTCGGGCTCTGGTGCAAGGTCCCAGCTGGTTTGCTaGCCCAGCTTGTCCACCGACTGCACGGACTCATTGTCAGCACCA +
Preference number: 6 (lower is better)
Translates to: DFHSSGSGARSQLVC*PSLSTDCTDSLSAP
Trigger: TGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGAGCCCGAAGAATGGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TCCCAGCTGGTTTGCTTGCCCAGCTTGTCCACCGACTaGACGGACTCATTGTCAGCACCAATGCCACTGTCC +
Preference number: 6 (lower is better)
Translates to: SQLVCLPSLSTD*TDSLSAPMPLS
Trigger: GGACAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp ACCTTTGCCATAGGAGCCCCTGAGAGCAGGCAGTCCTaGGGTCTGCCTGAGCCCAAACAGAATGGACTTTGC +
Preference number: 6 (lower is better)
Translates to: TFAIGAPESRQS*GLPEPKQNGLC
Trigger: GCAAAGTCCATTCTGTTTGGGCTCAGGCAGACCCCAGGACTGCCTGCTCTCAGGGGCTCCTATGGCAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GCTGCAGAATTTGCTCCTGGCTCTGCCCCTGCCCTTTaGCACCCAGGGCATAAAATGCCTCCAGCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: AAEFAPGSAPAL*HPGHKMPPASD
Trigger: GTCAGAAGCTGGAGGCATTTTATGCCCTGGGTGCCAAAGGGCAGGGGCAGAGCCAGGAGCAAATTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TCTGGTGCAAGGTCCCAGCTGGTTTGCTTGCCCAGCTaGTCCACCGACTGCACGGACTCATTGTCAGCACCA +
Preference number: 6 (lower is better)
Translates to: SGARSQLVCLPS*STDCTDSLSAP
Trigger: TGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACAAGCTGGGCAAGCAAACCAGCTGGGACCTTGCACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TGTCCACCGACTGCACGGACTCATTGTCAGCACCAATaGCACTGTCCTCAGAGCATAAGGGGAGACCCTGCA +
Preference number: 6 (lower is better)
Translates to: CPPTARTHCQHQ*HCPQSIRGDPA
Trigger: TGCAGGGTCTCCCCTTATGCTCTGAGGACAGTGGCATTGGTGCTGACAATGAGTCCGTGCAGTCGGTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TTGTCCATCAGAACTTCCATAGGCGGTGGAGGGAGGTaGTCGAGGTTCCCCTCCATTTCACAGCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSIRTSIGGGGR*SRFPSISQLSS
Trigger: GGAGCTCAGCTGTGAAATGGAGGGGAACCTCGAGCACCTCCCTCCACCGCCTATGGAAGTTCTGATGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp GTGAGCGAGGCCACTGTGCCATTGAGCACCTGCAGCTaGCTGACTGTGTACTGTAGCAGCTGTTGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: VSEATVPLSTCS*LTVYCSSCCRR
Trigger: TCTCCTGCAACAGCTGCTACAGTACACAGTCAGCAAGCTGCAGGTGCTCAATGGCACAGTGGCCTCGCTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CCCCTCCATTTCACAGCTGAGCTCCTCACTCTTGGCTaGTTCTGCTTTAGGCAGAGGGGGAAAGATAGGTGC +
Preference number: 6 (lower is better)
Translates to: PLHFTAELLTLG*FCFRQRGKDRC
Trigger: GCACCTATCTTTCCCCCTCTGCCTAAAGCAGAAGCAGCCAAGAGTGAGGAGCTCAGCTGTGAAATGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GGAGGTGATATTTTCTGGGCTTGTACTGGAGAGGCATaGGCTCCTTGCTTCGTCCTGTGCTCGTGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: GGDIFWACTGEA*APCFVLCSWLN
Trigger: GTTCAGCCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTACAAGCCCAGAAAATATCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp ATTTTCTGGGCTTGTACTGGAGAGGCATGGGCTCCTTaGTTCGTCCTGTGCTCGTGGCTGAACCTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: IFWACTGEAWAP*FVLCSWLNLCH
Trigger: ATGGCAAAGGTTCAGCCACGAGCACAGGACGAAGCAAGGAGCCCATGCCTCTCCAGTACAAGCCCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp GCTCCTGGGTTTCCTTGGGGGAGTTCTCTGTGGACTTaGTGCTTTCTGGGGACTCCAGAGAAGCGAATGATT +
Preference number: 6 (lower is better)
Translates to: APGFPWGSSLWT*CFLGTPEKRMI
Trigger: AATCATTCGCTTCTCTGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACTCCCCCAAGGAAACCCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp AGTCCACTTTGCCTTCAGGCTCATGAGCAGGGTGGATaGTTTGGTAGCAGTGGCTCTGTGTGCTTGACGTGT +
Preference number: 6 (lower is better)
Translates to: SPLCLQAHEQGG*FGSSGSVCLTC
Trigger: ACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTGCTCATGAGCCTGAAGGCAAAGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp AGCACTTCTCCATCCTTGGAGATCTCCCCCAACAGCTaGCTGATCTCCTCAAAGCACAGCAGCAAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: STSPSLEISPNS*LISSKHSSKKL
Trigger: CAGCTTCTTGCTGCTGTGCTTTGAGGAGATCAGCCAGCTGTTGGGGGAGATCTCCAAGGATGGAGAAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp GCTCTCTTTTCTTCAAAGGCCAAGCCAGATCCTCCCTaGCTTCCTGCAGGAGCACTTCTCCATCCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: ALFSSKAKPDPP*LPAGALLHPWR
Trigger: TCTCCAAGGATGGAGAAGTGCTCCTGCAGGAAGTCAGGGAGGATCTGGCTTGGCCTTTGAAGAAAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp TCCAGAGTGGAGCTGGCCCGAGTGAGAAGATGGGTATaGCATGTACCCCTTAGATTGATCTGTGGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SRVELARVRRWV*HVPLRLICGGF
Trigger: GAACCCACCACAGATCAATCTAAGGGGTACATGTCATACCCATCTTCTCACTCGGGCCAGCTCCACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS GCA 72 bp ACTGTGTACTGTAGCAGCTGTTGCAGGAGATTTGGCTaGTCCTGGGGCTCTCTTTTCTTCAAAGGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: TVYCSSCCRRFG*SWGSLFFKGQA
Trigger: GGCTTGGCCTTTGAAGAAAAGAGAGCCCCAGGAGCAGCCAAATCTCCTGCAACAGCTGCTACAGTACACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CCTGGGTTTCCTTGGGGGAGTTCTCTGTGGACTTGCTaGTTTCTGGGGACTCCAGAGAAGCGAATGATTTGT +
Preference number: 6 (lower is better)
Translates to: PGFPWGSSLWTC*FLGTPEKRMIC
Trigger: ACAAATCATTCGCTTCTCTGGAGTCCCCAGAAAGCAGCAAGTCCACAGAGAACTCCCCCAAGGAAACCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TTTTTGTGCTCAGCTTATTTTCCAAGTGGGTTGCAGTaGAGTGGAGGTAGCTGCTGGAGCCCTCCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: FLCSAYFPSGLQ*SGGSCWSPPGS
Trigger: GCTTCCTGGAGGGCTCCAGCAGCTACCTCCACTCCACTGCAACCCACTTGGAAAATAAGCTGAGCACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp GACCAGTCCTGGTGCCCACAGGGCACAGGGACAAACTaGATCCTTTCGCTGATTGACTCCTTCATCTTCAGA +
Preference number: 6 (lower is better)
Translates to: DQSWCPQGTGTN*ILSLIDSFIFR
Trigger: TCTGAAGATGAAGGAGTCAATCAGCGAAAGGATCAAGTTTGTCCCTGTGCCCTGTGGGCACCAGGACTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp CTAGGCAAAATACTGAAGTTCTTGGTGAGGGATGCCTaGAGCCTGCTGGTGGTGTTGCTTGGACTGACCCTG +
Preference number: 6 (lower is better)
Translates to: LGKILKFLVRDA*SLLVVLLGLTL
Trigger: CAGGGTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAACTTCAGTATTTTGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CTAGCTGCCTCAGAGCCCTCAGGAGGCGTTCATCCACATTCCTTTTaGTGCTCAGCTTATTTTCCAAGTGGGTTGCAGTGGAGTGGAGGT +
Preference number: 6 (lower is better)
Translates to: LAASEPSGGVHPHSF*CSAYFPSGLQWSGG
Trigger: ACCTCCACTCCACTGCAACCCACTTGGAAAATAAGCTGAGCACAAAAAGGAATGTGGATGAACGCCTCCTGAGGGCTCTGAGGCAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TCCTCGCTGTCACTAAGAGATGAAGCGTCCATCGGCCTGGAGGTTTaGGAAAGGTGTGGTTCCACAGAGACCCCAATCCCAAAGGAATCA +
Preference number: 6 (lower is better)
Translates to: SSLSLRDEASIGLEV*ERCGSTETPIPKES
Trigger: TGATTCCTTTGGGATTGGGGTCTCTGTGGAACCACACCTTTCCAAAACCTCCAGGCCGATGGACGCTTCATCTCTTAGTGACAGCGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TCCTCCTCAGACCAGTCCTGGTGCCCACAGGGCACAGGGACAAACTaGATCCTTTCGCTGATTGACTCCTTCATCTTCAGAATCATTTCC +
Preference number: 6 (lower is better)
Translates to: SSSDQSWCPQGTGTN*ILSLIDSFIFRIIS
Trigger: GGAAATGATTCTGAAGATGAAGGAGTCAATCAGCGAAAGGATCAAGTTTGTCCCTGTGCCCTGTGGGCACCAGGACTGGTCTGAGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TCACTGACCTCTCCTGATGGGATGGCATTTGGAAGCTTCCCAGCTTaGCCTTGTTCGTCCTCAGGATGGGGATTGCATTTCTGCAAGATG +
Preference number: 6 (lower is better)
Translates to: SLTSPDGMAFGSFPA*PCSSSGWGLHFCKM
Trigger: CATCTTGCAGAAATGCAATCCCCATCCTGAGGACGAACAAGGCAAAGCTGGGAAGCTTCCAAATGCCATCCCATCAGGAGAGGTCAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp AGAGGGGGAAAGATAGGTGCTAAGGGCTTCCAGCCTATGCCCATTTaGAGAGATTCTCTGCCTGATGCTGGAGAAATTTGGGGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: RGGKIGAKGFQPMPI*RDSLPDAGEIWGFG
Trigger: TCCGAAGCCCCAAATTTCTCCAGCATCAGGCAGAGAATCTCTCAAAATGGGCATAGGCTGGAAGCCCTTAGCACCTATCTTTCCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp ACCAGCAAAGGGATGGAACCTCTTTCACTTCCGCCCTaGCATCCTGGCCGAATTGCTTTGGGCTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: TSKGMEPLSLPP*HPGRIALGFFK
Trigger: CTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCATCCCTTTGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CTGACTAGGCAAAATACTGAAGTTCTTGGTGAGGGATaGCTTGAGCCTGCTGGTGGTGTTGCTTGGACTGAC +
Preference number: 6 (lower is better)
Translates to: LTRQNTEVLGEG*LEPAGGVAWTD
Trigger: GTCAGTCCAAGCAACACCACCAGCAGGCTCAAGGCATCCCTCACCAAGAACTTCAGTATTTTGCCTAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CTCCTGATGGGATGGCATTTGGAAGCTTCCCAGCTTTaGCTTGTTCGTCCTCAGGATGGGGATTGCATTTCT +
Preference number: 6 (lower is better)
Translates to: LLMGWHLEASQL*LVRPQDGDCIS
Trigger: AGAAATGCAATCCCCATCCTGAGGACGAACAAGGCAAAGCTGGGAAGCTTCCAAATGCCATCCCATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TCTCCTGATGGGATGGCATTTGGAAGCTTCCCAGCTTaGCCTTGTTCGTCCTCAGGATGGGGATTGCATTTC +
Preference number: 6 (lower is better)
Translates to: SPDGMAFGSFPA*PCSSSGWGLHF
Trigger: GAAATGCAATCCCCATCCTGAGGACGAACAAGGCAAAGCTGGGAAGCTTCCAAATGCCATCCCATCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TGGTGGGTTCCTCCTTCTCTGCATCCCGGACAGTCCTaGGTTTCTAACTCATTCTTGGGTAGAAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: WWVPPSLHPGQS*VSNSFLGRREM
Trigger: CATCTCCCTTCTACCCAAGAATGAGTTAGAAACCAAGGACTGTCCGGGATGCAGAGAAGGAGGAACCCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS CAA 90 bp AAGGGATGGAACCTCTTTCACTTCCGCCCTGACATCCTGGCCGAATaGCTTTGGGCTTTTTCAAGAACTGAATGCCACTCTTTGCAACGC +
Preference number: 6 (lower is better)
Translates to: KGWNLFHFRPDILAE*LWAFSRTECHSLQR
Trigger: GCGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCATCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp AGCATCCTCAGACTCTCCGTGGGACTGAAAGTTTCAATAAGCTTCTaGACGGATGTTCTGGTGGGACAGCCTCTGACATTCCAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: SILRLSVGLKVSISF*TDVLVGQPLTFQSV
Trigger: CACAGACTGGAATGTCAGAGGCTGTCCCACCAGAACATCCGTCAAGAAGCTTATTGAAACTTTCAGTCCCACGGAGAGTCTGAGGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp GAGCAGGGTGGATGGTTTGGTAGCAGTGGCTCTGTGTaGTTGACGTGTGACATTTTGCTGTCCTTTTCCATT +
Preference number: 6 (lower is better)
Translates to: EQGGWFGSSGSV*LTCDILLSFSI
Trigger: AATGGAAAAGGACAGCAAAATGTCACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp GAGCCCTCAGGAGGCGTTCATCCACATTCCTTTTTGTaGTCAGCTTATTTTCCAAGTGGGTTGCAGTGGAGT +
Preference number: 6 (lower is better)
Translates to: EPSGGVHPHSFL*SAYFPSGLQWS
Trigger: ACTCCACTGCAACCCACTTGGAAAATAAGCTGAGCACAAAAAGGAATGTGGATGAACGCCTCCTGAGGGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp CCCCTTAGATTGATCTGTGGTGGGTTCCTCCTTCTCTaGATCCCGGACAGTCCTTGGTTTCTAACTCATTCT +
Preference number: 6 (lower is better)
Translates to: PLRLICGGFLLL*IPDSPWFLTHS
Trigger: AGAATGAGTTAGAAACCAAGGACTGTCCGGGATGCAGAGAAGGAGGAACCCACCACAGATCAATCTAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602958.1
CDS CAA 72 bp CAGGGTGGATGGTTTGGTAGCAGTGGCTCTGTGTGCTaGACGTGTGACATTTTGCTGTCCTTTTCCATTTGG +
Preference number: 6 (lower is better)
Translates to: QGGWFGSSGSVC*TCDILLSFSIW
Trigger: CCAAATGGAAAAGGACAGCAAAATGTCACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp GAGGAGGTAGCTGGGCAGAATATGGAATGTGTGTTCCCAGACACTTaGGCTATGACTGCTTGGCTGTCTTCAGAGTCTCTTGTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: EEVAGQNMECVFPDT*AMTAWLSSESLVSL
Trigger: CAAGGAAACAAGAGACTCTGAAGACAGCCAAGCAGTCATAGCCAAAGTGTCTGGGAACACACATTCCATATTCTGCCCAGCTACCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp CTTCCAGCCTATGCCCATTTTGAGAGATTCTCTGCCTaGTGCTGGAGAAATTTGGGGCTTCGGATACAAAGG +
Preference number: 6 (lower is better)
Translates to: LPAYAHFERFSA*CWRNLGLRIQR
Trigger: CCTTTGTATCCGAAGCCCCAAATTTCTCCAGCATCAGGCAGAGAATCTCTCAAAATGGGCATAGGCTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp ACCTCTTTCACTTCCGCCCTGACATCCTGGCCGAATTaGTTTGGGCTTTTTCAAGAACTGAATGCCACTCTT +
Preference number: 6 (lower is better)
Translates to: TSFTSALTSWPN*FGLFQELNATL
Trigger: AAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp AGGGATGGAACCTCTTTCACTTCCGCCCTGACATCCTaGCCGAATTGCTTTGGGCTTTTTCAAGAACTGAAT +
Preference number: 6 (lower is better)
Translates to: RDGTSFTSALTS*PNCFGLFQELN
Trigger: ATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTTCCATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp ATTTTGAGAGATTCTCTGCCTGATGCTGGAGAAATTTaGGGCTTCGGATACAAAGGGGCAAGCCCTGTGTAC +
Preference number: 6 (lower is better)
Translates to: ILRDSLPDAGEI*GFGYKGASPVY
Trigger: GTACACAGGGCTTGCCCCTTTGTATCCGAAGCCCCAAATTTCTCCAGCATCAGGCAGAGAATCTCTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp AACCTCTTTCACTTCCGCCCTGACATCCTGGCCGAATaGCTTTGGGCTTTTTCAAGAACTGAATGCCACTCT +
Preference number: 6 (lower is better)
Translates to: NLFHFRPDILAE*LWAFSRTECHS
Trigger: AGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAAGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp AAGTCTGCCCCTTGTGATCCATGGGAACCCTGTGTCTaGAACGGAATATCCTTAGCCATGTGGCTTTGTGAT +
Preference number: 6 (lower is better)
Translates to: KSAPCDPWEPCV*NGISLAMWLCD
Trigger: ATCACAAAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGGTTCCCATGGATCACAAGGGGCAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp CCCTGTGTCTTGAACGGAATATCCTTAGCCATGTGGCTTTGTGATTaGTTCAGCTGGGATGAAGAGGTTTTGGTTCCTGGGATCAGTCCT +
Preference number: 6 (lower is better)
Translates to: PCVLNGISLAMWLCD*FSWDEEVLVPGISP
Trigger: AGGACTGATCCCAGGAACCAAAACCTCTTCATCCCAGCTGAACAAATCACAAAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp TCTCCAGAAAAGTCTGCCCCTTGTGATCCATGGGAACCCTGTGTCTaGAACGGAATATCCTTAGCCATGTGGCTTTGTGATTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SPEKSAPCDPWEPCV*NGISLAMWLCDLFS
Trigger: GCTGAACAAATCACAAAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGGTTCCCATGGATCACAAGGGGCAGACTTTTCTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 90 bp GCTCATGAGCAGGGTGGATGGTTTGGTAGCAGTGGCTCTGTGTGCTaGACGTGTGACATTTTGCTGTCCTTTTCCATTTGGAAGTATCTT +
Preference number: 6 (lower is better)
Translates to: AHEQGGWFGSSGSVC*TCDILLSFSIWKYL
Trigger: AAGATACTTCCAAATGGAAAAGGACAGCAAAATGTCACACGTCAAGCACACAGAGCCACTGCTACCAAACCATCCACCCTGCTCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp TCCTGGGATCAGTCCTTCCATATCTTTCCTTTTGCCTaGAGCAGGATCTCCCATGAGCTGACAAAGACCTTT +
Preference number: 6 (lower is better)
Translates to: SWDQSFHIFPFA*SRISHELTKTF
Trigger: AAAGGTCTTTGTCAGCTCATGGGAGATCCTGCTTCAGGCAAAAGGAAAGATATGGAAGGACTGATCCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TTTCACTTCCGCCCTGACATCCTGGCCGAATTGCTTTaGGCTTTTTCAAGAACTGAATGCCACTCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: FHFRPDILAELL*AFSRTECHSLQ
Trigger: TTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAATTCGGCCAGGATGTCAGGGCGGAAGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp AAGATAGGTGCTAAGGGCTTCCAGCCTATGCCCATTTaGAGAGATTCTCTGCCTGATGCTGGAGAAATTTGG +
Preference number: 6 (lower is better)
Translates to: KIGAKGFQPMPI*RDSLPDAGEIW
Trigger: CCAAATTTCTCCAGCATCAGGCAGAGAATCTCTCAAAATGGGCATAGGCTGGAAGCCCTTAGCACCTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp GGATGGGGATTGCATTTCTGCAAGATGCTCTTGTCCTaGCTAGGCAAAATACTGAAGTTCTTGGTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: GWGLHFCKMLLS*LGKILKFLVRD
Trigger: ATCCCTCACCAAGAACTTCAGTATTTTGCCTAGTCAGGACAAGAGCATCTTGCAGAAATGCAATCCCCATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS GCA 72 bp TATGGAATGTGTGTTCCCAGACACTTTGGCTATGACTaGTTGGCTGTCTTCAGAGTCTCTTGTTTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: YGMCVPRHFGYD*LAVFRVSCFLV
Trigger: CACAAGGAAACAAGAGACTCTGAAGACAGCCAAGCAGTCATAGCCAAAGTGTCTGGGAACACACATTCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp GAACCCTGTGTCTTGAACGGAATATCCTTAGCCATGTaGCTTTGTGATTTGTTCAGCTGGGATGAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: EPCVLNGISLAM*LCDLFSWDEEV
Trigger: AACCTCTTCATCCCAGCTGAACAAATCACAAAGCCACATGGCTAAGGATATTCCGTTCAAGACACAGGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TTGAACGGAATATCCTTAGCCATGTGGCTTTGTGATTaGTTCAGCTGGGATGAAGAGGTTTTGGTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: LNGISLAMWLCD*FSWDEEVLVPG
Trigger: CCCAGGAACCAAAACCTCTTCATCCCAGCTGAACAAATCACAAAGCCACATGGCTAAGGATATTCCGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp TTGCTTTGGGCTTTTTCAAGAACTGAATGCCACTCTTaGCAACGCTGTTTACAAGGTCACTGTGTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LLWAFSRTECHS*QRCLQGHCVKV
Trigger: CACCTTCACACAGTGACCTTGTAAACAGCGTTGCAAAGAGTGGCATTCAGTTCTTGAAAAAGCCCAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS TCA 72 bp CTAGTCCATCCAGGCAATTTTCAGGCCAGAATTCTTTaGAGTCCATGGTACAATATCCTAAACTTGGAACCA +
Preference number: 6 (lower is better)
Translates to: LVHPGNFQARIL*SPWYNILNLEP
Trigger: TGGTTCCAAGTTTAGGATATTGTACCATGGACTTCAAAGAATTCTGGCCTGAAAATTGCCTGGATGGACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CCA 72 bp TTTCTTTATTTTCTTGGTCCAAATGTGAAGAGGGAGTaGTACCTGTCGTCCTGTTGTTGTTCTAAGTTTGGA +
Preference number: 6 (lower is better)
Translates to: FLYFLGPNVKRE*YLSSCCCSKFG
Trigger: TCCAAACTTAGAACAACAACAGGACGACAGGTACCACTCCCTCTTCACATTTGGACCAAGAAAATAAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331664.6
CDS CAA 72 bp GTGACATTTTGCTGTCCTTTTCCATTTGGAAGTATCTaGGGTACTACTTTCCTCACTCTCATCTCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: VTFCCPFPFGSI*GTTFLTLISRK
Trigger: TTTTCTGGAGATGAGAGTGAGGAAAGTAGTACCCAAGATACTTCCAAATGGAAAAGGACAGCAAAATGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331664.6