RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PBXIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163346

Ensembl transcript IDs: ENST00000368460.7, ENST00000368463.8, ENST00000368465.5, ENST00000490230.1, ENST00000493133.1, ENST00000498553.5

Found 382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGTGACAAAACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATaGATTTGCATAGACGGCAACGCAGGTCCAGCTAAGGCCTTTTTC +
Preference number: 1 (lower is better)
Translates to: SDKTQAHIPGPGVFA*ICIDGNAGPAKAFF
Trigger: GAAAAAGGCCTTAGCTGGACCTGCGTTGCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGTTTTGTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR GCA 90 bp AAAACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTaGATAGACGGCAACGCAGGTCCAGCTAAGGCCTTTTTCTACATA +
Preference number: 1 (lower is better)
Translates to: KTQAHIPGPGVFACI*IDGNAGPAKAFFYI
Trigger: TATGTAGAAAAAGGCCTTAGCTGGACCTGCGTTGCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR CCA 90 bp ATAAGAAACCCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTaGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTC +
Preference number: 1 (lower is better)
Translates to: IRNPKFPEINLPKIT*PGFEPEAQTPKPTL
Trigger: GAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGGGTTTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp GCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCAGGGGCACCATGGGCTaGGGTGGGCCGGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: ASSTSGSGRTCRSTSSMGRGTMG*GGPASR
Trigger: CCGGGAGGCCGGCCCACCTCAGCCCATGGTGCCCCT...GCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490230.1
3UTR-3UTR GCA 90 bp GGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCAGTCTCAGACTCTGCGGTGTCATCGTCACTaGTGGAGCAGCGGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GLGGPAAPLPPWAQSQTLRCHRH*WSSGPP
Trigger: AGGAGGGCCGCTGCTCCAGCAGTGACGATGACACCG...CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
3UTR-3UTR CCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAAGGTAAGTCCTCGTGCTaGGCCTCGAGCCAGCAACTC +
Preference number: 2 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKGKSSC*ASSQQL
Trigger: GAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACC...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGCAGGGTAAGTCCTCGTaGTGGGCCTCGAGCCAGCAA +
Preference number: 2 (lower is better)
Translates to: LRLRLQNPHSICYISQGWQGKSS*WASSQQ
Trigger: TTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCTG...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTTGTGTGAAAGATATCTaGGGACACCAAACAAGCCAG +
Preference number: 2 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGCVKDI*GHQTSQ
Trigger: CTGGCTTGTTTGGTGTCCTCAGATATCTTTCACACA...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTCCTGGAGTATTTGCATaGATTTGCATAGACGGCAAC +
Preference number: 2 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGPGVFA*ICIDGN
Trigger: GTTGCCGTCTATGCAAATGCATGCAAATACTCCAGG...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACCCACATCCCAGGGCCTaGAGTATTTGCATGCATTTG +
Preference number: 2 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYPHPRA*SICMHL
Trigger: CAAATGCATGCAAATACTCCAGGCCCTGGGATGTGG...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGTCAAGGGGCCCACTATaGGGACATACACTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRSRGPL*GHTLKR
Trigger: CCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGA...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAGGGGGCAAGTACCAGTaGCTGGGATGGACCCATCCA +
Preference number: 2 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAGGKYQ*LGWTHP
Trigger: TGGATGGGTCCATCCCAGGCACTGGTACTTGCCCCC...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAGCACCGGTCAGCATGTaGGTCAAGGGGCCCACTATG +
Preference number: 2 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAAPVSM*VKGPTM
Trigger: CATAGTGGGCCCCTTGACCCACATGCTGACCGGTGC...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTTTTGCTCTACTGTGTaGAAGATATCTGAGGACACC +
Preference number: 2 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHFCSTV*KISEDT
Trigger: GGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAA...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGTACATCTCCCAGGGGTaGGGCCAAGGCAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: KFPEINLPKITWPGFEPEYISQG*GQGSCE
Trigger: CTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTA...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGTTCACATAGGGAGGTaGAGCCGTGGGAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPVHIGR*SRGRSR
Trigger: CCTGCTTCTCCCACGGCTTCACCTCCCTATGTGAAC...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATACCAGTGCCTGGGATaGACCCATCCATTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQYQCLG*THPFRQ
Trigger: CTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGGGCCAAGGCAGCTGTaGGCAAAAGGAGAAGTATCA +
Preference number: 2 (lower is better)
Translates to: KFPEINLPKITWPGFEPEGPRQL*AKGEVS
Trigger: TGATACTTCTCCTTTTGCTCACAGCTGCCTTGGCCC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGGTATTTGCATGCATTTaGATAGACGGCAACGCAGGT +
Preference number: 2 (lower is better)
Translates to: LRLRLQNPHSICYISQGWVFACI*IDGNAG
Trigger: ACCTGCGTTGCCGTCTATGCAAATGCATGCAAATAC...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCACCACATCCCAGGGCCTaGAGTATTTGCATGCATTTG +
Preference number: 2 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAPHPRA*SICMHL
Trigger: CAAATGCATGCAAATACTCCAGGCCCTGGGATGTGG...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATGCAAGTACCAGTGCCTaGGATGGACCCATCCATTCA +
Preference number: 2 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHASTSA*DGPIHS
Trigger: TGAATGGATGGGTCCATCCCAGGCACTGGTACTTGC...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGCAAGTACCAGTGCCTaGGATGGACCCATCCATTCA +
Preference number: 2 (lower is better)
Translates to: PKFPEINLPKITWPGFEPASTSA*DGPIHS
Trigger: TGAATGGATGGGTCCATCCCAGGCACTGGTACTTGC...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTTCTCCCCCTTCACAGTaGCAAAACACAAGCCCACAT +
Preference number: 2 (lower is better)
Translates to: PKFPEINLPKITWPGFEPSPPSQ*QNTSPH
Trigger: ATGTGGGCTTGTGTTTTGTCACTGTGAAGGGGGAGA...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAAGGGCCTGGAGTATTTaGATGCATTTGCATAGACGG +
Preference number: 2 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQRAWSI*MHLHRR
Trigger: CCGTCTATGCAAATGCATGCAAATACTCCAGGCCCT...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR CAA 90 bp CAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTaGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTAC +
Preference number: 2 (lower is better)
Translates to: QSSQRLTCPRSLGLD*SLRLRLQNPHSICY
Trigger: GTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATGTGTGAAAGATATCTaGGGACACCAAACAAGCCAG +
Preference number: 2 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQCVKDI*GHQTSQ
Trigger: CTGGCTTGTTTGGTGTCCTCAGATATCTTTCACACA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACACTTTATTGGGATCTaGGTCTACAGTTCACATAGG +
Preference number: 2 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQHFIGI*VYSSHR
Trigger: CCTATGTGAACTGTAGACTCAGATCCCAATAAAGTG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGCCTGGAGTATTTGCATaGATTTGCATAGACGGCAAC +
Preference number: 2 (lower is better)
Translates to: KFPEINLPKITWPGFEPEPGVFA*ICIDGN
Trigger: GTTGCCGTCTATGCAAATGCATGCAAATACTCCAGG...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATGCAACAGCACTTTATTaGGATCTGAGTCTACAGTTC +
Preference number: 2 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHATALY*DLSLQF
Trigger: GAACTGTAGACTCAGATCCCAATAAAGTGCTGTTGC...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACGCAGGGCTGGTGATTTaGCTCTACTGTGTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHAGLVI*LYCVKD
Trigger: ATCTTTCACACAGTAGAGCAAAATCACCAGCCCTGC...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR GCA 72 bp GCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTaGATAGACGGCAACGCAGGTCCAGCTAAGGCCTTT +
Preference number: 3 (lower is better)
Translates to: AHIPGPGVFACI*IDGNAGPAKAF
Trigger: AAAGGCCTTAGCTGGACCTGCGTTGCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTTCAGAATCAGATaGCCTTCCCCAGACCCCACC +
Preference number: 3 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDESFRIR*PSPDPT
Trigger: GGTGGGGTCTGGGGAAGGCAATCTGATTCTGAAGCT...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR GCA 72 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATaGATTTGCATAGACGGCAACGCAGGTCCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: TQAHIPGPGVFA*ICIDGNAGPAK
Trigger: CTTAGCTGGACCTGCGTTGCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR TCA 72 bp GGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTaGGGACACCAAACAAGCCAGGACAGAGTCCACCCT +
Preference number: 3 (lower is better)
Translates to: GLVILLYCVKDI*GHQTSQDRVHP
Trigger: AGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGCAGGGCTGGTGATTTaGCTCTACTGTGTGAAAGAT +
Preference number: 3 (lower is better)
Translates to: LSLRLRLQNPHSICYISQAGLVI*LYCVKD
Trigger: ATCTTTCACACAGTAGAGCAAAATCACCAGCCCTGC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR CCA 72 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTaGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAAA +
Preference number: 3 (lower is better)
Translates to: PKFPEINLPKIT*PGFEPEAQTPK
Trigger: TTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCAAGTATTTGCATGCATTaGCATAGACGGCAACGCAGG +
Preference number: 3 (lower is better)
Translates to: KGPTMGTYTQEDESSLASSICMH*HRRQRR
Trigger: CCTGCGTTGCCGTCTATGCAAATGCATGCAAATACT...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATAGTATTTGCATGCATTaGCATAGACGGCAACGCAGG +
Preference number: 3 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHSICMH*HRRQRR
Trigger: CCTGCGTTGCCGTCTATGCAAATGCATGCAAATACT...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR-3UTR CAA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCATGCAACAGCACTTTATaGGGATCTGAGTCTACAGTT +
Preference number: 3 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRACNSTL*GSESTV
Trigger: AACTGTAGACTCAGATCCCAATAAAGTGCTGTTGCA...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR TCA 72 bp AACGCAGGTCCAGCTAAGGCCTTTTTCTACATAAAGTaGCATCAGTGCAGGGCTGGTGATTTTGCTCTACTG +
Preference number: 3 (lower is better)
Translates to: NAGPAKAFFYIK*HQCRAGDFALL
Trigger: CAGTAGAGCAAAATCACCAGCCCTGCACTGATGTCACTTTATGTAGAAAAAGGCCTTAGCTGGACCTGCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCAGTCTCAGGGGCACCATGGGCTaGGGTGGGCCGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HLGVWEDLPLHFLHGPSLRGTMG*GGPASR
Trigger: CCGGGAGGCCGGCCCACCTCAGCCCATGGTGCCCCT...GAGACTGGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp CAGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGAGCAGCGGCCCTCCAGCCAGGGGCACCATaGGCTGAGGTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: QTLHVHVGVIVTAGAAALQPGAP*AEVGRP
Trigger: AGGCCGGCCCACCTCAGCCCATGGTGCCCCTGGCTG...GAGGGCCGCTGCTCCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp GCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCTGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: ASSTSGSGRTCRSTSSMGWVHPG*RAQCLH
Trigger: GTGGAGACACTGGGCCCGGCATCCAGGATGGACCCA...GCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp AGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGAGCAGCGGCCCTCCCAGCACCTCGGGGTCTaGGAGGACCTGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RPSMSTSVSSSLLEQRPSQHLGV*EDLPLH
Trigger: GTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTG...GGAGGGCCGCTGCTCCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp TTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCCAAGGAGGCACATGTTaGGGGAGATGCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FQHLGVWEDLPLHFLHGPQGGTC*GRCPAP
Trigger: GGGAGCTGGGCATCTCCCTCAACATGTGCCTCCTTG...GGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp TCCCGGCCCCGCCGTCTCCGCAGACCCTCCATGTCCACGTCGGTGTCATCGTCAACAGGGACAGGGCAGTaGGGTGACTGCTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRPRRLRRPSMSTSVSSSTGTGQ*GDCFGG
Trigger: ACCCCCAAAGCAGTCACCTCACTGCCCTGTCCCTGT...TGACGATGACACCGACGTGGACATGGAGGGTCTGCGGAGACGGCGGGGCCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp CCCGCCGTCTCCGCAGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGGACTGCTTTGGGGGTTaGAGGCAGGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAVSADPPCPRRCHRHCWDCFGG*RQALWR
Trigger: CCTCCACAGAGCCTGCCTTCAACCCCCAAAGCAGTC...CCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCTGCGGAGACGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp CACAGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATAGCGGCCCTCCTCCCTaGTCCAAGCTAGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSFQHLGVWEDLPLHFLHSGPPP*SKLGER
Trigger: CCTTTCCCCTAGCTTGGATCAGGGAGGAGGGCCGCT...ATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACGCCTGCAGCTGGGCCTaGAGCAGCCGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHACSWA*SSRMSW
Trigger: CCAGGACATCCGGCTGCTGCAGGCCCAGCTGCAGGC...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACCCCCAGGCCAAGCAGAACCAGGGCCCCAAGGAGGCACATGTTGAGGGAGATGGCCCAGTGTCTCCACTaGCAGGCTCTCGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPRPSRTRAPRRHMLREMAQCLH*QALGAS
Trigger: GCTGGCTCCGAGAGCCTGCCAGTGGAGACACTGGGC...CATCTCCCTCAACATGTGCCTCCTTGGGGCCCTGGTTCTGCTTGGCCTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp TTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FQHLGVWEDLPLHFLHGPILGPS*MPGPVS
Trigger: AGACACTGGGCCCGGCATCCAGGATGGACCCAGAAT...GGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp CACAGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGCCTGTCACCACGGTaGTCTCCTGCAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HSFQHLGVWEDLPLHFLHGLSPR*SPAGLP
Trigger: AGGGAGACCTGCAGGAGACCACCGTGGTGACAGGCC...ATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp TTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCGCTCCACTTCCTCCATaGGCCCAGTCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: FQHLGVWEDLPLHFLHGPAPLPP*AQSQTL
Trigger: CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGC...GGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTGGGGTGCCCGGTACTTaGGCCTCAACAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGGVPGT*ASTALP
Trigger: GGGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCC...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTCAGCCCCGGTGGTGGTaGTGGTGGCTATGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGQPRWW*WWLWLC
Trigger: GCACAGCCATAGCCACCACCACCACCACCGGGGCTG...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTTGGGGCCTTGCTCCCTaGTGGCCTTGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGWGLAP*WPCHPV
Trigger: CACAGGGTGACAAGGCCATCAGGGAGCAAGGCCCCA...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTGGAGGCACTGGGGCCTaGAGCTGTTCCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGGGTGA*SCSLSP
Trigger: TGGGCTAAGGGAACAGCTGCAGGCCCCAGTGCCTCC...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGCGGGCCCGCAGCTGCTaGAGCTCTGACTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWRARSC*SSDSRA
Trigger: GGCTCTGGAGTCAGAGCTGCAGCAGCTGCGGGCCCG...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACAGCCGGGCCCGCAGCTaGTGCAGCTCTGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHSRARS*CSSDSR
Trigger: TCTGGAGTCAGAGCTGCAGCAGCTGCGGGCCCGGCT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAACAGCCAGGGGCACCATaGGCTGAGGTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQQPGAP*AEVGRP
Trigger: AGGCCGGCCCACCTCAGCCCATGGTGCCCCTGGCTG...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACGAGGCACACCCCATCTaGGCCCCGGACACAGTCGGC +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYEAHPI*APDTVG
Trigger: GCCGACTGTGTCCGGGGCCCAGATGGGGTGTGCCTC...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACCAAGCCAGCATGAGCTaGGTCCCCGCGGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHQASMS*VPAAGI
Trigger: GATGCCAGCCGCGGGGACCCAGCTCATGCTGGCTTG...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACACACCTGAGCAGCCCTaGGGTGCCCGGTACTTGGGC +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHTPEQP*GARYLG
Trigger: GCCCAAGTACCGGGCACCCCAGGGCTGCTCAGGTGT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GTCTCCGCAGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGAGCAGCGCTGTGGCTGCCACCTaGACCAGCTCTTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: VSADPPCPRRCHRHCWSSAVAAT*TSSCFG
Trigger: ACCGAAGCAAGAGCTGGTTCAGGTGGCAGCCACAGC...GCTGCTCCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCTGCGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp AGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCTTCCAGGGTGCCCTTaGCCTCAGTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SFQHLGVWEDLPLHFLHGLPGCP*PQSPLL
Trigger: TAACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAG...CCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR TCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTAGCTGCTTTGGGGGTTaGAGGCAGGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGSCFGG*RQALWR
Trigger: CCTCCACAGAGCCTGCCTTCAACCCCCAAAGCAGCT...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGGCCTCTACCCCCACTaGGGCACACCCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQGLYPH*GTPHLG
Trigger: GCCCAGATGGGGTGTGCCTCAGTGGGGGTAGAGGCC...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHGSGRT*RSTSSM
Trigger: CATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCC...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCTCCATGGGCCCAGTCTCAGACTCTGAGAGGCCACCTGAGAAGAGGAGGACCGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: SSMGPVSDSERPPEKRRTGSGRT*RSTSSM
Trigger: CATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCC...GGTCCTCCTCTTCTCAGGTGGCCTCTCAGAGTCTGAGACTGGGCCCATGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACGAGGCCAGCTCCTGTTaGCGCACTGGGGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHEASSC*RTGASS
Trigger: AGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCTC...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTCTCCGCAGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGAGCAGCTCCCTGAGGCTGCTGTaGCTGCCACCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VSADPPCPRRCHRHCWSSSLRLL*LPPEPA
Trigger: AGCTGGTTCAGGTGGCAGCCACAGCAGCCTCAGGGA...GCTGCTCCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCTGCGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp CACAGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: HSFQHLGVWEDLPLHFLHGSLRF*VHPGCR
Trigger: CCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCC...ATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGCAGCACCTCGGGGTCTaGGAGGACCTGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRQHLGV*EDLPLH
Trigger: GTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTG...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGCCCCGGTGGTGGTGGTaGTGGCTATGGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRPRWWW*WLWLCP
Trigger: GGGGCACAGCCATAGCCACCACCACCACCACCGGGG...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAAGGGGCACCATGGGCTaGGGTGGGCCGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQRGTMG*GGPASR
Trigger: CCGGGAGGCCGGCCCACCTCAGCCCATGGTGCCCCT...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGAGGGGCACCATGGGCTaGGGTGGGCCGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQRGTMG*GGPASR
Trigger: CCGGGAGGCCGGCCCACCTCAGCCCATGGTGCCCCT...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTTCTGCTTCAGGAAGCTaGGTTCTGGCTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGSASGS*VLAPAP
Trigger: GGGAGCAGGAGCCAGAACTCAGCTTCCTGAAGCAGA...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp ACCCCCAGGCCAAGCAGAACCAGGGCCCCAAGGAGGCACATGTTGAGGGAGATGGACAGGGCAGTGAGGTaGCTGCTTTGGGGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TPRPSRTRAPRRHMLREMDRAVR*LLWGLK
Trigger: CTTCAACCCCCAAAGCAGTCACCTCACTGCCCTGTC...CATCTCCCTCAACATGTGCCTCCTTGGGGCCCTGGTTCTGCTTGGCCTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACCGGTGTCATCGTCACTaGTGGAGCAGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYRCHRH*WSSGPP
Trigger: AGGAGGGCCGCTGCTCCAGCAGTGACGATGACACCG...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYGSGRT*RSTSSM
Trigger: CATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCC...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGGGAGGCACTGGGGCCTaGAGCTGTTCCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWGGTGA*SCSLSP
Trigger: TGGGCTAAGGGAACAGCTGCAGGCCCCAGTGCCTCC...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAAGCCGGGCCCGCAGCTaGTGCAGCTCTGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQSRARS*CSSDSR
Trigger: TCTGGAGTCAGAGCTGCAGCAGCTGCGGGCCCGGCT...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATCGGGCCCTGTCGCTTaGCCTCCTTCTTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQSGPVA*PPSCSP
Trigger: CGGGGAGCAAGAAGGAGGGCAAGCGACAGGGCCCGA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGGGGCCTCAACAGCTCTaGCCAGGATGGCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRGPQQL*PGWQGV
Trigger: GACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCCC...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACAAAGTCAGGCCCTCCTaGCGGGCACACTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHKVRPS*RAHSST
Trigger: TGTGGACGAGTGTGCCCGGCAGGAGGGCCTGACTTT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGCAGCCAGGGGCACCATaGGCTGAGGTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VSASQGPRVCWKGKARAKQPGAP*AEVGRP
Trigger: AGGCCGGCCCACCTCAGCCCATGGTGCCCCTGGCTG...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GGCAAGTACCAGTGCCTGGGATGGACCCATCCATTCAGGCAGGGGGTGTGGGGTGCTCCACTTCCTCCATaGGCCCAGTCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GKYQCLGWTHPFRQGVWGAPLPP*AQSQTL
Trigger: CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGC...ACCCCACACCCCCTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTACTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACACTGTCAGGAGGCACTaGGGCCTGCAGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHTVRRH*GLQLFP
Trigger: AGGGAACAGCTGCAGGCCCCAGTGCCTCCTGACAGT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACTGTCAGCCCCGGTGGTaGTGGTGGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYCQPRW*WWWLWL
Trigger: CAGCCATAGCCACCACCACCACCACCGGGGCTGACA...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGCAAGGCCATTCCCTGTaGGGCAGGGTGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRQGHSL*GRVSAP
Trigger: CGGGGCTGACACCCTGCCCCACAGGGAATGGCCTTG...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQWVHPG*RAQCLH
Trigger: GTGGAGACACTGGGCCCGGCATCCAGGATGGACCCA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCTCCATGGGCCCAGTCTCAGACTCTGAGAGGCCACCTGAGAAGAGGAGGACCACCACGGTGGTCTCCTaGAGGTCTCCCTGGACTACT +
Preference number: 4 (lower is better)
Translates to: SSMGPVSDSERPPEKRRTTTVVS*RSPWTT
Trigger: AGTAGTCCAGGGAGACCTGCAGGAGACCACCGTGGT...GGTCCTCCTCTTCTCAGGTGGCCTCTCAGAGTCTGAGACTGGGCCCATGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGCGGGCCCGCAGCTGCTaGAGCTCTGACTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWRARSC*SSDSRA
Trigger: GGCTCTGGAGTCAGAGCTGCAGCAGCTGCGGGCCCG...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAACTGAGTTCTGGCTCCTaGTCCCTGGGGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQLSSGS*SLGPCS
Trigger: GGAGCAAGGCCCCAGGGAGCAGGAGCCAGAACTCAG...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACGCCTTCCGGTCTCTCTaGCCATCCCACCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHAFRSL*PSHHFS
Trigger: GGAAAAGTGGTGGGATGGGCAGAGAGACCGGAAGGC...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACCCTCCTCTAGCCCTTTaGGCTGGTGCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHPPLAL*AGASGS
Trigger: AGAGCCTGATGCACCAGCCCAAAGGGCTAGAGGAGG...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAACTGGGTCCCCGCGGCTaGCATCCTGCAAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKLGPRG*HPASSS
Trigger: AGAGGAGCTTGCAGGATGCCAGCCGCGGGGACCCAG...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAAGAGGGGTAGCTCCTTaGTCAGCTGCCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQRGVAP*SAAQPR
Trigger: CCTGGGCTGGGCAGCTGACCAAGGAGCTACCCCTCT...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCAAGGGGCACCATGGGCTaGGGTGGGCCGGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSRGTMG*GGPASR
Trigger: CCGGGAGGCCGGCCCACCTCAGCCCATGGTGCCCCT...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAACAAGGAGGCACATGTTaGGGGAGATGCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQQGGTC*GRCPAP
Trigger: GGGAGCTGGGCATCTCCCTCAACATGTGCCTCCTTG...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAATGGGGCCTTGCTCCCTaGTGGCCTTGTCACCCTGTG +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKWGLAP*WPCHPV
Trigger: CACAGGGTGACAAGGCCATCAGGGAGCAAGGCCCCA...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAACTGGTGCCAGGCCTTTaGGGCATTGGCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKLVPGL*GIGRDP
Trigger: GGGGTCTCTGCCAATGCCTCAAAGGCCTGGCACCAG...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYGSLRF*VHPGCR
Trigger: CCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCC...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAACTGGGTCCCCGCGGCTaGCATCCTGCAAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDELGPRG*HPASSS
Trigger: AGAGGAGCTTGCAGGATGCCAGCCGCGGGGACCCAG...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGACACCTGAGCAGCCCTaGGGTGCCCGGTACTTGGGC +
Preference number: 4 (lower is better)
Translates to: VSASQGPRVCWKGKARAKTPEQP*GARYLG
Trigger: GCCCAAGTACCGGGCACCCCAGGGCTGCTCAGGTGT...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGGTAAGTCCTCGTGCTaGGCCTCGAGCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQGKSSC*ASSQQL
Trigger: GAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACC...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGTGGTGCATCAGGCTCTaGAGCTCTTCCTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWWCIRL*SSSFWA
Trigger: GGCCCAAAAGGAAGAGCTTCAGAGCCTGATGCACCA...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGGCCTCTACCCCCACTaGGGCACACCCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQGLYPH*GTPHLG
Trigger: GCCCAGATGGGGTGTGCCTCAGTGGGGGTAGAGGCC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGTTCACATAGGGAGGTaGAGCCGTGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQVHIGR*SRGRSR
Trigger: CCTGCTTCTCCCACGGCTTCACCTCCCTATGTGAAC...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCCAGTCTCAGACTCTGTCTCCTCTGTTAGAATaGTGCCAGACTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLGGPAAPLPPWAQSQTLSPLLE*CQTEGF
Trigger: AAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGA...CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR GCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCCGGTGTCATCGTCACTaGTGGAGCAGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGRCHRH*WSSGPP
Trigger: AGGAGGGCCGCTGCTCCAGCAGTGACGATGACACCG...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAACAGGGTAAGTCCTCGTaGTGGGCCTCGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKQGKSS*WASSQQ
Trigger: TTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCTG...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACAGCACCTCGGGGTCTaGGAGGACCTGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQQHLGV*EDLPLH
Trigger: GTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGAGGCACACCCCATCTaGGCCCCGGACACAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQEAHPI*APDTVG
Trigger: GCCGACTGTGTCCGGGGCCCAGATGGGGTGTGCCTC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCTTGTCACCCTGTaGGCCTCTACCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWGLVTL*ASTPTE
Trigger: CTCAGTGGGGGTAGAGGCCCACAGGGTGACAAGGCC...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACTGGAAGTGGGACTTCTaGTGCCAGGCCTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYWKWDF*CQAFEA
Trigger: TGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCA...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGATGGCAGGGGGTCATaGCTGTCCTTAGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQDGRGS*LSLVPS
Trigger: GGAAGGGACTAAGGACAGCCATGACCCCCTGCCATC...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCAGAGGGGTAGCTCCTTaGTCAGCTGCCCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGRGVAP*SAAQPR
Trigger: CCTGGGCTGGGCAGCTGACCAAGGAGCTACCCCTCT...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACTACCAGTGCCTGGGATaGACCCATCCATTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYYQCLG*THPFRQ
Trigger: CTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTA...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGAGCGGCCCTCCTCCCTaGTCCAAGCTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQSGPPP*SKLLWG
Trigger: CCCCCAAAGCAGCTTGGATCAGGGAGGAGGGCCGCT...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCATCAGCCAAGCCAGCATaGGCTGGGTCCCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASSAKPA*AGSPRL
Trigger: CAGCCGCGGGGACCCAGCTCATGCTGGCTTGGCTGA...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATCAGCCAAGCCAGCATaGGCTGGGTCCCCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPSAKPA*AGSPRL
Trigger: CAGCCGCGGGGACCCAGCTCATGCTGGCTTGGCTGA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACGGGCCAAGGCAGCTGTaGGCAAAAGGAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYGPRQL*AKGEVS
Trigger: TGATACTTCTCCTTTTGCTCACAGCTGCCTTGGCCC...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGAAGTGGGACTTCTGGTaGCAGGCCTTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWKWDFW*QAFEAL
Trigger: CAATGCCTCAAAGGCCTGGCACCAGAAGTCCCACTT...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGTCCCTCCACCGAGGTTaGTTCTGCTTTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWSLHRG*FCFSPE
Trigger: CTCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGA...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATCCCTGAGGCTGCTGTaGCTGCCACCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDESLRLL*LPPEPA
Trigger: AGCTGGTTCAGGTGGCAGCCACAGCAGCCTCAGGGA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368463.8
CDS-3UTR CCA 90 bp TCTCCGCAGACCCTCCATGTCCACGTCGGTGTCATCGTCACTGCTGGAGCAGCGTCCCTTCTCCATCCATaGTCCCAGCTAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SPQTLHVHVGVIVTAGAASLLHP*SQLILS
Trigger: GGAAAGAATTAGCTGGGACCATGGATGGAGAAGGGA...CGCTGCTCCAGCAGTGACGATGACACCGACGTGGACATGGAGGGTCTGCGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCACAGCCAGGGGCACCATaGGCTGAGGTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSQPGAP*AEVGRP
Trigger: AGGCCGGCCCACCTCAGCCCATGGTGCCCCTGGCTG...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGACTGTCAGGAGGCACTaGGGCCTGCAGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VSASQGPRVCWKGKARAKTVRRH*GLQLFP
Trigger: AGGGAACAGCTGCAGGCCCCAGTGCCTCCTGACAGT...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAAAGCAGCCGGATGTCCTaGTTCTCCTTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKSSRMS*FSLASL
Trigger: CAAGCTGGCCAAGGAGAACCAGGACATCCGGCTGCT...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAAGCCCAGTGTCTCCACTaGCAGGCTGAACCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKAQCLH*QAEPAL
Trigger: AAGAGCTGGTTCAGCCTGCCAGTGGAGACACTGGGC...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGACTCCAGAGCCCGCTaGAAGGCTTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQDSRAR*KASPCC
Trigger: GCAGCAGGGCGAAGCCTTCCAGCGGGCTCTGGAGTC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGACTCCAGAGCCCGCTaGAAGGCTTCGCCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQDSRAR*KASPCC
Trigger: GCAGCAGGGCGAAGCCTTCCAGCGGGCTCTGGAGTC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGGCCCTGCAGTTTCTaGGCCAATCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDERPCSF*ANLWPS
Trigger: GCTGGGCCACAGATTGGCCCAGAAACTGCAGGGCCT...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGGTGCCCGGTACTTaGGCCTCAACAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQGVPGT*ASTALP
Trigger: GGGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTATGGTGGTGGTGGCTATaGCTGTGCCCCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KISEDTKQARTESTLQELWWWWL*LCPSLG
Trigger: GCCCAGGGAGGGGCACAGCCATAGCCACCACCACCA...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACAGCCCCGGTGGTGGTaGTGGTGGCTATGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQQPRWW*WWLWLC
Trigger: GCACAGCCATAGCCACCACCACCACCACCGGGGCTG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGTCAGCCCCGGTaGTGGTGGTGGTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQGCQPR*WWWWLW
Trigger: CCATAGCCACCACCACCACCACCGGGGCTGACACCC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTAGGGTGTCAGCCCCGGTaGTGGTGGTGGTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: KISEDTKQARTESTLQELGCQPR*WWWWLW
Trigger: CCATAGCCACCACCACCACCACCGGGGCTGACACCC...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGCAAGGCCATTCCCTGTaGGGCAGGGTGTCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQQGHSL*GRVSAP
Trigger: CGGGGCTGACACCCTGCCCCACAGGGAATGGCCTTG...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGGCACCGGTCAGCATGTaGGTCAAGGGGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: VSASQGPRVCWKGKARAKAPVSM*VKGPTM
Trigger: CATAGTGGGCCCCTTGACCCACATGCTGACCGGTGC...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATACATCTCCCAGGGGTaGGGCCAAGGCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEYISQG*GQGSCE
Trigger: CTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAGTTCACATAGGGAGGTaGAGCCGTGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEVHIGR*SRGRSR
Trigger: CCTGCTTCTCCCACGGCTTCACCTCCCTATGTGAAC...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGTGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQWVHPG*RAQCLH
Trigger: GTGGAGACACTGGGCCCGGCATCCAGGATGGACCCA...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAACCACGGTGGTCTCCTaGAGGTCTCCCTGGACTACT +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDETTVVS*RSPWTT
Trigger: AGTAGTCCAGGGAGACCTGCAGGAGACCACCGTGGT...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGACCACGGTGGTCTCCTaGAGGTCTCCCTGGACTACT +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWTTVVS*RSPWTT
Trigger: AGTAGTCCAGGGAGACCTGCAGGAGACCACCGTGGT...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCACCGCGGCTGGCATCCTaGAAGCTCCTCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAPRLAS*KLLSRS
Trigger: GGATCTGGAGAGGAGCTTGCAGGATGCCAGCCGCGG...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACCGCGGCTGGCATCCTaGAAGCTCCTCTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQPRLAS*KLLSRS
Trigger: GGATCTGGAGAGGAGCTTGCAGGATGCCAGCCGCGG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGGCCTTCCGGTCTCTCTaGCCATCCCACCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWAFRSL*PSHHFS
Trigger: GGAAAAGTGGTGGGATGGGCAGAGAGACCGGAAGGC...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATCGGGCCCTGTCGCTTaGCCTCCTTCTTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPSGPVA*PPSCSP
Trigger: CGGGGAGCAAGAAGGAGGGCAAGCGACAGGGCCCGA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACAGGGCCTGGAGTATTTaGATGCATTTGCATAGACGG +
Preference number: 4 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHRAWSI*MHLHRR
Trigger: CCGTCTATGCAAATGCATGCAAATACTCCAGGCCCT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGCCCAGTGTCTCCACTaGCAGGCTCTCGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPAQCLH*QALGAS
Trigger: GCTGGCTCCGAGAGCCTGCCAGTGGAGACACTGGGC...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368463.8
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEGSLRF*VHPGCR
Trigger: CCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCC...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGCCTGTCACCACGGTaGTCTCCTGCAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQGLSPR*SPAGLP
Trigger: AGGGAGACCTGCAGGAGACCACCGTGGTGACAGGCC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCGCTCCACTTCCTCCATaGGCCCAGTCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGAPLPP*AQSQTL
Trigger: CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGC...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGTGTCCTGGTTCTCCTTaGCCAGCTTGTCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRCPGSP*PACPAE
Trigger: TTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACA...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCACAAGCCAGCATGAGCTaGGTCCCCGCGGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASQASMS*VPAAGI
Trigger: GATGCCAGCCGCGGGGACCCAGCTCATGCTGGCTTG...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGAGGCCTTTGAGGCATTaGCAGAGACCCCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWRPLRH*QRPQGP
Trigger: AGGACCCTGGGGTCTCTGCCAATGCCTCAAAGGCCT...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACAGCTCTGCCCAGGATaGCAGGGGGTCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQQLCPG*QGVMAV
Trigger: GACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGTGGTGGTGGTGGCTATaGCTGTGCCCCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEWWWWL*LCPSLG
Trigger: GCCCAGGGAGGGGCACAGCCATAGCCACCACCACCA...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGCAAGTACCAGTGCCTaGGATGGACCCATCCATTCA +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQASTSA*DGPIHS
Trigger: TGAATGGATGGGTCCATCCCAGGCACTGGTACTTGC...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGCTTCCAGGGTGCCCTTaGCCTCAGTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWLPGCP*PQSPLL
Trigger: TAACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAG...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGAGCTGCTTTGGGGGTTaGAGGCAGGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQSCFGG*RQALWR
Trigger: CCTCCACAGAGCCTGCCTTCAACCCCCAAAGCAGCT...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCAAGCGGCCCTCCTCCCTaGTCCAAGCTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSSGPPP*SKLLWG
Trigger: CCCCCAAAGCAGCTTGGATCAGGGAGGAGGGCCGCT...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCACTGGTGCCAGGCCTTTaGGGCATTGGCAGAGACCCC +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASLVPGL*GIGRDP
Trigger: GGGGTCTCTGCCAATGCCTCAAAGGCCTGGCACCAG...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCAACCTGCAGCTGGGCCTaGAGCAGCCGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSTCSWA*SSRMSW
Trigger: CCAGGACATCCGGCTGCTGCAGGCCCAGCTGCAGGT...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGGCCTGCAGCTGGGCCTaGAGCAGCCGGATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKACSWA*SSRMSW
Trigger: CCAGGACATCCGGCTGCTGCAGGCCCAGCTGCAGGC...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATGCTCCCTGGGGCCTTaGTCCCTGATGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQCSLGP*SLMALS
Trigger: TGACAAGGCCATCAGGGAGCAAGGCCCCAGGGAGCA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGCTGAGTTCTGGCTCCTaGTCCCTGGGGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPELSSGS*SLGPCS
Trigger: GGAGCAAGGCCCCAGGGAGCAGGAGCCAGAACTCAG...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGAGGCCAGCTCCTGTTaGCGCACTGGGGCTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEEASSC*RTGASS
Trigger: AGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCTC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGCAGGGTAAGTCCTCGTaGTGGGCCTCGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQQGKSS*WASSQQ
Trigger: TTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCTG...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTAGGGGGCAAGTACCAGTaGCTGGGATGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: KISEDTKQARTESTLQELGGKYQ*LGWTHP
Trigger: TGGATGGGTCCATCCCAGGCACTGGTACTTGCCCCC...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GCCAGGACAGAGTCCACCCTCCAGGAGTTAGATAACGCTGGGATCTTGGGCTGGTCCCTTCTCCATCCATaGTCCCAGCTAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ARTESTLQELDNAGILGWSLLHP*SQLILS
Trigger: GGAAAGAATTAGCTGGGACCATGGATGGAGAAGGGA...CCAGCCCAAGATCCCAGCGTTATCTAACTCCTGGAGGGTGGACTCTGTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGGCCTGTCACCACGGTaGTCTCCTGCAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPGLSPR*SPAGLP
Trigger: AGGGAGACCTGCAGGAGACCACCGTGGTGACAGGCC...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTAAGGCCACCCCCAGCCTaGTTCTCCACAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVRPPPA*FSTARG
Trigger: GCCCCTGGCTGTGGAGAACCAGGCTGGGGGTGGCCT...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACAGCACCTCGGGGTCTaGGAGGACCTGCCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVQHLGV*EDLPLH
Trigger: GTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTG...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAACCATGTTTTGCAGGCTaGGGACACTGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEPCFAG*GHCQEA
Trigger: TGCCTCCTGACAGTGTCCCCAGCCTGCAAAACATGG...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGGCCTTGTCACCCTGTaGGCCTCTACCCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEGLVTL*ASTPTE
Trigger: CTCAGTGGGGGTAGAGGCCCACAGGGTGACAAGGCC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGAGGCCCTGCAGTTTCTaGGCCAATCTGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQRPCSF*ANLWPS
Trigger: GCTGGGCCACAGATTGGCCCAGAAACTGCAGGGCCT...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCTGGAAGTGGGACTTCTaGTGCCAGGCCTTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGWKWDF*CQAFEA
Trigger: TGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCA...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCAGCTCTGCCCAGGATaGCAGGGGGTCATGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHQLCPG*QGVMAV
Trigger: GACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTG...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGCCCCGGTGGTGGTGGTaGTGGCTATGGCTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKPRWWW*WLWLCP
Trigger: GGGGCACAGCCATAGCCACCACCACCACCACCGGGG...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTTGTCAGCCCCGGTGGTaGTGGTGGTGGCTATGGCTG +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPCQPRW*WWWLWL
Trigger: CAGCCATAGCCACCACCACCACCACCGGGGCTGACA...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGCACCGGTCAGCATGTaGGTCAAGGGGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQAPVSM*VKGPTM
Trigger: CATAGTGGGCCCCTTGACCCACATGCTGACCGGTGC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGTACCAGTGCCTGGGATaGACCCATCCATTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWYQCLG*THPFRQ
Trigger: CTGCCTGAATGGATGGGTCCATCCCAGGCACTGGTA...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATACATCTCCCAGGGGTaGGGCCAAGGCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQYISQG*GQGSCE
Trigger: CTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTGTGGCTGCCACCTaGACCAGCTCTTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEAVAAT*TSSCFG
Trigger: ACCGAAGCAAGAGCTGGTTCAGGTGGCAGCCACAGC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368463.8
CDS-3UTR TCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGAGCGGCCCTCCTCCCTaGTCCAAGCTGCTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKSGPPP*SKLLWG
Trigger: CCCCCAAAGCAGCTTGGATCAGGGAGGAGGGCCGCT...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTCAAGGAGGCACATGTTaGGGGAGATGCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPQGGTC*GRCPAP
Trigger: GGGAGCTGGGCATCTCCCTCAACATGTGCCTCCTTG...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCACGGTGTCATCGTCACTaGTGGAGCAGCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSRCHRH*WSSGPP
Trigger: AGGAGGGCCGCTGCTCCAGCAGTGACGATGACACCG...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHGSGRT*RSTSSM
Trigger: CATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCC...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCGGAGGCACTGGGGCCTaGAGCTGTTCCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTGGTGA*SCSLSP
Trigger: TGGGCTAAGGGAACAGCTGCAGGCCCCAGTGCCTCC...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGTGCTCCCTGGGGCCTTaGTCCCTGATGGCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPECSLGP*SLMALS
Trigger: TGACAAGGCCATCAGGGAGCAAGGCCCCAGGGAGCA...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCACCCAGCAGCCGTCGCTaGCTCTCTAACTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAPSSRR*LSNSCL
Trigger: AAGGCAAGAGTTAGAGAGGCAGCGACGGCTGCTGGG...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATTCTTATGTTTCCAGTaGTCAGCCTTCCGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQFLCFQ*SAFRSL
Trigger: GAGAGACCGGAAGGCTGAGCACTGGAAACATAAGAA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATCCCTCCACCGAGGTTaGTTCTGCTTTTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDESLHRG*FCFSPE
Trigger: CTCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGGGGCCTCAACAGCTCTaGCCAGGATGGCAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKGPQQL*PGWQGV
Trigger: GACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCCC...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTAAAGTCAGGCCCTCCTaGCGGGCACACTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPKVRPS*RAHSST
Trigger: TGTGGACGAGTGTGCCCGGCAGGAGGGCCTGACTTT...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGGGGGCAAGTACCAGTaGCTGGGATGGACCCATCCA +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEGGKYQ*LGWTHP
Trigger: TGGATGGGTCCATCCCAGGCACTGGTACTTGCCCCC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTAGCCCAGTGTCTCCACTaGCAGGCTCTCGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVAQCLH*QALGAS
Trigger: GCTGGCTCCGAGAGCCTGCCAGTGGAGACACTGGGC...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGGCCTGTCACCACGGTaGTCTCCTGCAGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHGLSPR*SPAGLP
Trigger: AGGGAGACCTGCAGGAGACCACCGTGGTGACAGGCC...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGCCTCCTCTAGCCCTTTaGGCTGGTGCATCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQPPLAL*AGASGS
Trigger: AGAGCCTGATGCACCAGCCCAAAGGGCTAGAGGAGG...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGGTAAGTCCTCGTGCTaGGCCTCGAGCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPGKSSC*ASSQQL
Trigger: GAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACC...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAATTGCCCAAGATCACTTaGCCTGGATTTGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKLPKIT*PGFEPE
Trigger: CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAA...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACTTCCAGGGTGCCCTTaGCCTCAGTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQLPGCP*PQSPLL
Trigger: TAACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCAGCTGCTTTGGGGGTTaGAGGCAGGCTCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTSCFGG*RQALWR
Trigger: CCTCCACAGAGCCTGCCTTCAACCCCCAAAGCAGCT...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATGGTGCATCAGGCTCTaGAGCTCTTCCTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQWCIRL*SSSFWA
Trigger: GGCCCAAAAGGAAGAGCTTCAGAGCCTGATGCACCA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCAAAGCGGAGGCGGTCATaGCGGAAGATGCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASKRRRS*RKMPSS
Trigger: TGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTT...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATAAGCGGAGGCGGTCATaGCGGAAGATGCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHKRRRS*RKMPSS
Trigger: TGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTT...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGTGTGTGAAAGATATCTaGGGACACCAAACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRCVKDI*GHQTSQ
Trigger: CTGGCTTGTTTGGTGTCCTCAGATATCTTTCACACA...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTATGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVWVHPG*RAQCLH
Trigger: GTGGAGACACTGGGCCCGGCATCCAGGATGGACCCA...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCACCCAGCAGCCGTCGCTaGCTCTCTAACTCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPPSSRR*LSNSCL
Trigger: AAGGCAAGAGTTAGAGAGGCAGCGACGGCTGCTGGG...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATTCCCTGAGGCTGCTGTaGCTGCCACCTGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHSLRLL*LPPEPA
Trigger: AGCTGGTTCAGGTGGCAGCCACAGCAGCCTCAGGGA...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGGCTATTATCAGAGTCTaGGCAGGAGGCCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWAIIRV*AGGHSC
Trigger: GCAACTATGGCCTCCTGCCCAGACTCTGATAATAGC...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368463.8
CDS-3UTR CCA 90 bp CACAGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HSAPGRPHQSITGDTMYVILGPS*MPGPVS
Trigger: AGACACTGGGCCCGGCATCCAGGATGGACCCAGAAT...AACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEILGPS*MPGPVS
Trigger: AGACACTGGGCCCGGCATCCAGGATGGACCCAGAAT...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHILGPS*MPGPVS
Trigger: AGACACTGGGCCCGGCATCCAGGATGGACCCAGAAT...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CACAGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTGCTCCACTTCCTCCATaGGCCCAGTCTCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: HSAPGRPHQSITGDTMYVAPLPP*AQSQTL
Trigger: CAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGC...AACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCACTGTCAGGAGGCACTaGGGCCTGCAGCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTTVRRH*GLQLFP
Trigger: AGGGAACAGCTGCAGGCCCCAGTGCCTCCTGACAGT...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGCCATGTTTTGCAGGCTaGGGACACTGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQPCFAG*GHCQEA
Trigger: TGCCTCCTGACAGTGTCCCCAGCCTGCAAAACATGG...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCAAGGCCTTTGAGGCATTaGCAGAGACCCCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASRPLRH*QRPQGP
Trigger: AGGACCCTGGGGTCTCTGCCAATGCCTCAAAGGCCT...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATGCTACCACTTTTCCTTaGGGGTTCCTTCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHATTFP*GFLRAL
Trigger: CAGGGCCCGAAGGAACCCCCAAGGAAAAGTGGTAGC...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCCCACATCCCAGGGCCTaGAGTATTTGCATGCATTTG +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGPHPRA*SICMHL
Trigger: CAAATGCATGCAAATACTCCAGGCCCTGGGATGTGG...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATGGGCCTAGGGTTTGTTaGAAGGGCAAGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHGPRVC*KGKARA
Trigger: TGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCC...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCAGGGCCTAGGGTTTGTTaGAAGGGCAAGGCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASGPRVC*KGKARA
Trigger: TGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCC...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCTTGCCCAAGATCACTTaGCCTGGATTTGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGLPKIT*PGFEPE
Trigger: CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAA...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTAGCTGTGGCTGCCACCTaGACCAGCTCTTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVAVAAT*TSSCFG
Trigger: ACCGAAGCAAGAGCTGGTTCAGGTGGCAGCCACAGC...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTAGCTCTTGGGCTCTGTaGGTGCTTGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPSSWAL*VLVLLP
Trigger: GGGAAGAAGGACAAGCACTCACAGAGCCCAAGAGCT...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGGGCCAAGGCAGCTGTaGGCAAAAGGAGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQGPRQL*AKGEVS
Trigger: TGATACTTCTCCTTTTGCTCACAGCTGCCTTGGCCC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCACCACGGTGGTCTCCTaGAGGTCTCCCTGGACTACT +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTTTVVS*RSPWTT
Trigger: AGTAGTCCAGGGAGACCTGCAGGAGACCACCGTGGT...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACACCGAGGTTGCTTCTaGTTTTCTCCAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQHRGCF*FSPEEW
Trigger: CCACTCCTCTGGAGAAAAGCAGAAGCAACCTCGGTG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAACCTGGAGTATTTGCATaGATTTGCATAGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKPGVFA*ICIDGN
Trigger: GTTGCCGTCTATGCAAATGCATGCAAATACTCCAGG...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGG +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTGSLRF*VHPGCR
Trigger: CCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCC...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCTCCCTTCTCCATCCATaGTCCCAGCTAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TQAHIPGPGVFACICIDGSLLHP*SQLILS
Trigger: GGAAAGAATTAGCTGGGACCATGGATGGAGAAGGGA...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCAAGCAGCCGGATGTCCTaGTTCTCCTTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSSSRMS*FSLASL
Trigger: CAAGCTGGCCAAGGAGAACCAGGACATCCGGCTGCT...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCATCAAGGGGCCCACTATaGGGACATACACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRASRGPL*GHTLKR
Trigger: CCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGA...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAATCAAGGGGCCCACTATaGGGACATACACTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQSRGPL*GHTLKR
Trigger: CCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGA...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGTCTGCTTCAGGAAGCTaGGTTCTGGCTCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKSASGS*VLAPAP
Trigger: GGGAGCAGGAGCCAGAACTCAGCTTCCTGAAGCAGA...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGAAGACCCATGTTTTaGAGGCTGGGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRARRPMF*RLGTLS
Trigger: TGACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCT...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTAAGTGGGACTTCTGGTaGCAGGCCTTTGAGGCATTG +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPKWDFW*QAFEAL
Trigger: CAATGCCTCAAAGGCCTGGCACCAGAAGTCCCACTT...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGCACCGAGGTTGCTTCTaGTTTTCTCCAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEHRGCF*FSPEEW
Trigger: CCACTCCTCTGGAGAAAAGCAGAAGCAACCTCGGTG...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp CCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACCCCATGTTTTGCAGGCTaGGGACACTGTCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PGRPHQSITGDTMYVSCTPCFAG*GHCQEA
Trigger: TGCCTCCTGACAGTGTCCCCAGCCTGCAAAACATGG...GGTACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGTGTCCTGGTTCTCCTTaGCCAGCTTGTCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPECPGSP*PACPAE
Trigger: TTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACA...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGAGCAGCCGGATGTCCTaGTTCTCCTTGGCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKSSRMS*FSLASL
Trigger: CAAGCTGGCCAAGGAGAACCAGGACATCCGGCTGCT...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTACACTCCCTAGAATTCTaGAAGTGGGACTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: KISEDTKQARTESTLQELHSLEF*KWDFWC
Trigger: GCACCAGAAGTCCCACTTCCAGAATTCTAGGGAGTG...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGGCTACCACTTTTCCTTaGGGGTTCCTTCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKATTFP*GFLRAL
Trigger: CAGGGCCCGAAGGAACCCCCAAGGAAAAGTGGTAGC...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGGATGGCAGGGGGTCATaGCTGTCCTTAGTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKDGRGS*LSLVPS
Trigger: GGAAGGGACTAAGGACAGCCATGACCCCCTGCCATC...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCAAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSRMLPD*GLSVWK
Trigger: CTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCT...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTACTTCCAGGGTGCCCTTaGCCTCAGTCTCCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVLPGCP*PQSPLL
Trigger: TAACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAG...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR TCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGAGCTCTTGGGCTCTGTaGGTGCTTGTCCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKSSWAL*VLVLLP
Trigger: GGGAAGAAGGACAAGCACTCACAGAGCCCAAGAGCT...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATTTTGCTCTACTGTGTaGAAGATATCTGAGGACACC +
Preference number: 4 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEFCSTV*KISEDT
Trigger: GGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCATCTCCCCCTTCACAGTaGCAAAACACAAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: KGPTMGTYTQEDESSLASSPPSQ*QNTSPH
Trigger: ATGTGGGCTTGTGTTTTGTCACTGTGAAGGGGGAGA...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATTCTCCCCCTTCACAGTaGCAAAACACAAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHSPPSQ*QNTSPH
Trigger: ATGTGGGCTTGTGTTTTGTCACTGTGAAGGGGGAGA...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGCACTTTATTGGGATCTaGGTCTACAGTTCACATAGG +
Preference number: 4 (lower is better)
Translates to: LRLRLQNPHSICYISQGWHFIGI*VYSSHR
Trigger: CCTATGTGAACTGTAGACTCAGATCCCAATAAAGTG...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGGTCATGACGGAAGATaGCATCCTCACCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQGHDGR*HPHQRK
Trigger: CTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGTCATGACGGAAGATaGCATCCTCACCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LSLRLRLQNPHSICYISQGHDGR*HPHQRK
Trigger: CTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTAAGGGCCTGGAGTATTTaGATGCATTTGCATAGACGG +
Preference number: 4 (lower is better)
Translates to: KISEDTKQARTESTLQELRAWSI*MHLHRR
Trigger: CCGTCTATGCAAATGCATGCAAATACTCCAGGCCCT...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKRMLPD*GLSVWK
Trigger: CTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCT...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCACCTCTGTTAGAATGCTaGCAGACTGAGGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSPLLEC*QTEGFQ
Trigger: CTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGG...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp CACAGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCTCCTCTGTTAGAATaGTGCCAGACTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HSAPGRPHQSITGDTMYVSPLLE*CQTEGF
Trigger: AAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGA...AACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATTCTCCTCTGTTAGAATaGTGCCAGACTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHSPLLE*CQTEGF
Trigger: AAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGA...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTATCCTTTTCCACACAGTaGTCCAGGCAGACCACACCA +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVSFSTQ*SRQTTP
Trigger: TGGTGTGGTCTGCCTGGAGCACTGTGTGGAAAAGGA...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAGTATTTGCATGCATTTaGATAGACGGCAACGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQVFACI*IDGNAG
Trigger: ACCTGCGTTGCCGTCTATGCAAATGCATGCAAATAC...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCACCTGGAGTATTTGCATaGATTTGCATAGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAPGVFA*ICIDGN
Trigger: GTTGCCGTCTATGCAAATGCATGCAAATACTCCAGG...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGCTATTATCAGAGTCTaGGCAGGAGGCCATAGTTGC +
Preference number: 4 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHAIIRV*AGGHSC
Trigger: GCAACTATGGCCTCCTGCCCAGACTCTGATAATAGC...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp CACAGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCCCTTCTCCATCCATaGTCCCAGCTAATTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HSAPGRPHQSITGDTMYVSLLHP*SQLILS
Trigger: GGAAAGAATTAGCTGGGACCATGGATGGAGAAGGGA...AACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTATGTCCTGGTTCTCCTTaGCCAGCTTGTCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVCPGSP*PACPAE
Trigger: TTCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACA...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGGCAAGTACCAGTGCCTaGGATGGACCCATCCATTCA +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKASTSA*DGPIHS
Trigger: TGAATGGATGGGTCCATCCCAGGCACTGGTACTTGC...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATTGTGTGAAAGATATCTaGGGACACCAAACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHCVKDI*GHQTSQ
Trigger: CTGGCTTGTTTGGTGTCCTCAGATATCTTTCACACA...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp CTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTAAGAAGACCCATGTTTTaGAGGCTGGGGACACTGTCA +
Preference number: 4 (lower is better)
Translates to: LQADHTNQSQVIPCMFHVRRPMF*RLGTLS
Trigger: TGACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCT...TACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR GCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGTATTTGCATGCATTTaGATAGACGGCAACGCAGGT +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEVFACI*IDGNAG
Trigger: ACCTGCGTTGCCGTCTATGCAAATGCATGCAAATAC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAGCAACAGCACTTTATTaGGATCTGAGTCTACAGTTC +
Preference number: 4 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAATALY*DLSLQF
Trigger: GAACTGTAGACTCAGATCCCAATAAAGTGCTGTTGC...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATTTTGCTCTACTGTGTaGAAGATATCTGAGGACACC +
Preference number: 4 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPFCSTV*KISEDT
Trigger: GGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR TCA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTCACTTTATTGGGATCTaGGTCTACAGTTCACATAGG +
Preference number: 4 (lower is better)
Translates to: PKFPEINLPKITWPGFEPHFIGI*VYSSHR
Trigger: CCTATGTGAACTGTAGACTCAGATCCCAATAAAGTG...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR GCA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGTCTCCTCTGTTAGAATaGTGCCAGACTGAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RAGDFALLCERYLRTPNKSPLLE*CQTEGF
Trigger: AAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGA...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATTTTCTCCAGAGGAGTaGAAGCTACCACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPFSPEE*KLPLFL
Trigger: AAGGAAAAGTGGTAGCTTCCACTCCTCTGGAGAAAA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CCA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCAACAGCACTTTATTaGGATCTGAGTCTACAGTTC +
Preference number: 4 (lower is better)
Translates to: KFPEINLPKITWPGFEPEATALY*DLSLQF
Trigger: GAACTGTAGACTCAGATCCCAATAAAGTGCTGTTGC...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR CAA 72 bp TTGAGGATAAGAAACCCAAAGTTCCCAGAGATTAACTaGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LRIRNPKFPEIN*PKITWPGFEPE
Trigger: CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGGGTTTCTTATCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
3UTR CAA 72 bp TATTTAATCACTTCCCCAGCCCTTCCATCGCCTTTTTaGAGGATAAGAAACCCAAAGTTCCCAGAGATTAAC +
Preference number: 4 (lower is better)
Translates to: YLITSPALPSPF*RIRNPKFPEIN
Trigger: GTTAATCTCTGGGAACTTTGGGTTTCTTATCCTCAAAAAAGGCGATGGAAGGGCTGGGGAAGTGATTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp GTCAGGCCCTCCTGCCGGGCACACTCGTCCACACCTGAGCAGCCCTaGGGTGCCCGGTACTTGGGCCTCAACAGCTCTGCCCAGGATGGC +
Preference number: 5 (lower is better)
Translates to: VRPSCRAHSSTPEQP*GARYLGLNSSAQDG
Trigger: GCCATCCTGGGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCCAGGGCTGCTCAGGTGTGGACGAGTGTGCCCGGCAGGAGGGCCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp GGCTGTGAGGGGCCTGCAGGGCTCTCTCAGATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCTCCACTGGCAGGCTCTCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GCEGPAGLSQILGPS*MPGPVSPLAGSRSQ
Trigger: CTGGCTCCGAGAGCCTGCCAGTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000490230.1
ENST00000493133.1
CDS CCA 90 bp GCCCTGGGGTGCCCGGTACTTGGGCCTCAACAGCTCTGCCCAGGATaGCAGGGGGTCATGGCTGTCCTTAGTCCCTTCCCTCCACCGAGG +
Preference number: 5 (lower is better)
Translates to: ALGCPVLGPQQLCPG*QGVMAVLSPFPPPR
Trigger: CCTCGGTGGAGGGAAGGGACTAAGGACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 90 bp GCCAAAGAAAGTCAGGCCCTCCTGCCGGGCACACTCGTCCACACCTaGGCAGCCCTGGGGTGCCCGGTACTTGGGCCTCAACAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AKESQALLPGTLVHT*AALGCPVLGPQQLC
Trigger: GCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCCAGGGCTGCTCAGGTGTGGACGAGTGTGCCCGGCAGGAGGGCCTGACTTTCTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 90 bp GTGAGGGGCCTGCAGGGCTCTCTCAGATTCTGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCACTGGCAGGCTCTCGGAGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: VRGLQGSLRFWVHPG*RAQCLHWQALGASK
Trigger: CTTGCTGGCTCCGAGAGCCTGCCAGTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000490230.1
ENST00000493133.1
CDS GCA 90 bp TGCCTGTCCCCCACAGCTTCCAGCACCTCGGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATGGGCCCAGTCTCAGACTCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: CLSPTASSTSGSGRT*RSTSSMGPVSDSER
Trigger: CCTCTCAGAGTCTGAGACTGGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCTGTGGGGGACAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000498553.5
CDS CCA 90 bp TGTCTTGGAGGGGCTGTGAGGGGCCTGCAGGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGGGCCCAGTGTCTCCACTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: CLGGAVRGLQGSLRF*VHPGCRAQCLHWQA
Trigger: AGCCTGCCAGTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCACAGCCCCTCCAAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
ENST00000493133.1
CDS CCA 90 bp CCCCGACTCCTCCACCCTTGGCCTGCCCTCCTTCCACCTTCCTGCTaGCTCCCTGTCCTCCTGACCTCCCCAGTTCTTCTTCCTTTCCCG +
Preference number: 5 (lower is better)
Translates to: PRLLHPWPALLPPSC*LPVLLTSPVLLPFP
Trigger: CGGGAAAGGAAGAAGAACTGGGGAGGTCAGGAGGACAGGGAGCCAGCAGGAAGGTGGAAGGAGGGCAGGCCAAGGGTGGAGGAGTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 90 bp GTGAGGGGCCTGCAGGGCTCTCTCAGATTCTGGGTCCATCCTGGATaGCGGGCCCAGTGTCTCCACTGGCAGGCTGAACCAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: VRGLQGSLRFWVHPG*RAQCLHWQAEPALA
Trigger: AGCAAGAGCTGGTTCAGCCTGCCAGTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368465.5
CDS GCA 90 bp GCTCCCCGACTCCTCCACCCTTGGCCTGCCCTCCTTCCACCTTCCTaGTGGCTCCCTGTCCTCCTGACCTCCCCAGTTCTTCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: APRLLHPWPALLPPS*WLPVLLTSPVLLPF
Trigger: GAAAGGAAGAAGAACTGGGGAGGTCAGGAGGACAGGGAGCCAGCAGGAAGGTGGAAGGAGGGCAGGCCAAGGGTGGAGGAGTCGGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp TTTCTGGGCCAATCTGTGGCCCAGCTCAGCCAAGCCAGCATGAGCTaGGTCCCCGCGGCTGGCATCCTGCAAGCTCCTCTCCAGATCCTG +
Preference number: 5 (lower is better)
Translates to: FLGQSVAQLSQASMS*VPAAGILQAPLQIL
Trigger: CAGGATCTGGAGAGGAGCTTGCAGGATGCCAGCCGCGGGGACCCAGCTCATGCTGGCTTGGCTGAGCTGGGCCACAGATTGGCCCAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCCTTCCAGGGTGCCCTaGACCTCAGTCTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SFQHLGVWEDLPLHFLHGPSRVP*TSVSSV
Trigger: AACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAGG...CCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS-3UTR CAA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTGGGGTGCCCGGTACTaGGGCCTCAACAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHWGARY*GLNSSA
Trigger: GGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCCA...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGAGTGAGGTGACTGCTTaGGGGGTTGAAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SFQHLGVWEDLPLHFLHGSEVTA*GVEGRL
Trigger: GAGCCTGCCTTCAACCCCCAAAGCAGTCACCTCACT...CCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS GCA 90 bp TTAGCAGAGAGGCCAGCTCCTGTTGCCGCACTGGGGCTAGCTCTGTaGCAAAGAAAGTCAGGCCCTCCTGCCGGGCACACTCGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LAERPAPVAALGLAL*QRKSGPPAGHTRPH
Trigger: GTGTGGACGAGTGTGCCCGGCAGGAGGGCCTGACTTTCTTTGGCACAGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCTCTCTGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp TCTGGTCCCAGGCCTGTCACCACGGTGGTCTCCTGCAGGTCTCCCTaGACTACTGTGTCTCCTGGGCCAGGAGGCTCCACACCACAAACA +
Preference number: 5 (lower is better)
Translates to: SGPRPVTTVVSCRSP*TTVSPGPGGSTPQT
Trigger: TGTTTGTGGTGTGGAGCCTCCTGGCCCAGGAGACACAGTAGTCCAGGGAGACCTGCAGGAGACCACCGTGGTGACAGGCCTGGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
ENST00000493133.1
ENST00000498553.5
CDS-3UTR CAA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAACGCTTGCCCTCCTTCTaGCTCCCCGACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQRLPSF*LPDSST
Trigger: GGTGGAGGAGTCGGGGAGCAAGAAGGAGGGCAAGCG...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 90 bp GGCAGCCGTGCCAAGTATGTTCTTAGCAGAGAGGCCAGCTCCTGTTaGCGCACTGGGGCTAGCTCTGTGCCAAAGAAAGTCAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GSRAKYVLSREASSC*RTGASSVPKKVRPS
Trigger: GGAGGGCCTGACTTTCTTTGGCACAGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCTCTCTGCTAAGAACATACTTGGCACGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp CGGTACTTGGGCCTCAACAGCTCTGCCCAGGATGGCAGGGGGTCATaGCTGTCCTTAGTCCCTTCCCTCCACCGAGGTTGCTTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: RYLGLNSSAQDGRGS*LSLVPSLHRGCFCF
Trigger: AAAGCAGAAGCAACCTCGGTGGAGGGAAGGGACTAAGGACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCCCAAGTACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AATCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACTCCTCCTCTAGCCCTTaGGGCTGGTGCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: NPKAPVSMWVKGPTMGTYSSSSP*GWCIRL
Trigger: GAGCCTGATGCACCAGCCCAAAGGGCTAGAGGAGGA...GTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAACAGGCCTTTGAGGCATaGGCAGAGACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQQAFEA*AETPGS
Trigger: GGACCCTGGGGTCTCTGCCAATGCCTCAAAGGCCTG...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp CACACTCAATTTGCTACATCTCCCAGGGGTGGGGCCAAGGCAGCTGTGAGCAAATTCGGGCCCTGTCGCTaGCCCTCCTTCTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: HTQFATSPRGGAKAAVSKFGPCR*PSFLLP
Trigger: GGGGAGCAAGAAGGAGGGCAAGCGACAGGGCCCGAA...TTTGCTCACAGCTGCCTTGGCCCCACCCCTGGGAGATGTAGCAAATTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GCTTCCAGCACCTCGGGGTCTGGGAGGACCTGCCGCTCCACTTCCTCCATGGGCGGTCTTCAGCTTAACTaGTTGCAGGCTTCCCTTTGT +
Preference number: 5 (lower is better)
Translates to: ASSTSGSGRTCRSTSSMGGLQLN*LQASLC
Trigger: ACAAAGGGAAGCCTGCAACAAGTTAAGCTGAAGACC...GCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490230.1
CDS GCA 90 bp AAGCTCCTCTCCAGATCCTGCTGTACAGACCCCAGCAGCCGTCGCTaGCTCTCTAACTCTTGCCTTAATGCCTGTGCCTCAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KLLSRSCCTDPSSRR*LSNSCLNACASASS
Trigger: GCTGGAGGCTGAGGCACAGGCATTAAGGCAAGAGTTAGAGAGGCAGCGACGGCTGCTGGGGTCTGTACAGCAGGATCTGGAGAGGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp TCTCCTTGGCCAGCTTGTCCAGCAGAAGACCCATGTTTTGCAGGCTaGGGACACTGTCAGGAGGCACTGGGGCCTGCAGCTGTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: SPWPACPAEDPCFAG*GHCQEALGPAAVPL
Trigger: TAAGGGAACAGCTGCAGGCCCCAGTGCCTCCTGACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCTGCTGGACAAGCTGGCCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000498553.5
CDS-3UTR CAA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACCAGAAGACCCATGTTTaGCAGGCTGGGGACACTGTC +
Preference number: 5 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHQKTHV*QAGDTV
Trigger: GACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCTG...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATCCTCCTCTAGCCCTTaGGGCTGGTGCATCAGGCTC +
Preference number: 5 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQSSSSP*GWCIRL
Trigger: GAGCCTGATGCACCAGCCCAAAGGGCTAGAGGAGGA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 90 bp CTGTCCTCCAGGGCATCCACAAAATCCCGGAAGCGGAGGCGGTCATaGCGGAAGATGCCATCCTCACCAAAGAAAGCAGGTGAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LSSRASTKSRKRRRS*RKMPSSPKKAGERG
Trigger: ACCCCTCTCACCTGCTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTTCCGGGATTTTGTGGATGCCCTGGAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 90 bp AGGGTGCCCTTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTCGGAGCCAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: RVPLTSVSSVRMLPD*GLSVWKSVPRSQQA
Trigger: TGCTTGCTGGCTCCGAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAAGGGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498553.5
CDS GCA 90 bp TCCTCACCAAAGAAAGCAGGTGAGAGGGGTAGCTCCTTGGTCAGCTaGCCAGCCCAGGGCAGCCGTGCCAAGTATGTTCTTAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSPKKAGERGSSLVS*PAQGSRAKYVLSRE
Trigger: CTCTCTGCTAAGAACATACTTGGCACGGCTGCCCTGGGCTGGGCAGCTGACCAAGGAGCTACCCCTCTCACCTGCTTTCTTTGGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 90 bp GGGCATCCACAAAATCCCGGAAGCGGAGGCGGTCATGACGGAAGATaGCATCCTCACCAAAGAAAGCAGGTGAGAGGGGTAGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GHPQNPGSGGGHDGR*HPHQRKQVRGVAPW
Trigger: CCAAGGAGCTACCCCTCTCACCTGCTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTTCCGGGATTTTGTGGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATGGGCCCCGCAGCTCTaGGGCTCTGTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEWAPQL*GSVSAC
Trigger: ACAAGCACTCACAGAGCCCAAGAGCTGCGGGGCCCA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 90 bp TCCATGGTCCCAGCTAATTCTTTCCCATCTGTCTTGGAGGGGCTGTaGGGGGCCTGCAGGGCTCTCTCAGATTCTGGGTCCATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SMVPANSFPSVLEGL*GACRALSDSGSILD
Trigger: ATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCACAGCCCCTCCAAGACAGATGGGAAAGAATTAGCTGGGACCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
ENST00000493133.1
CDS CCA 90 bp AGATGCCATCCTCACCAAAGAAAGCAGGTGAGAGGGGTAGCTCCTTaGTCAGCTGCCCAGCCCAGGGCAGCCGTGCCAAGTATGTTCTTA +
Preference number: 5 (lower is better)
Translates to: RCHPHQRKQVRGVAP*SAAQPRAAVPSMFL
Trigger: TAAGAACATACTTGGCACGGCTGCCCTGGGCTGGGCAGCTGACCAAGGAGCTACCCCTCTCACCTGCTTTCTTTGGTGAGGATGGCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGCAGAAGACCCATGTTTaGCAGGCTGGGGACACTGTC +
Preference number: 5 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRQKTHV*QAGDTV
Trigger: GACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCTG...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTATGGGGTGCCCGGTACTaGGGCCTCAACAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: KISEDTKQARTESTLQELWGARY*GLNSSA
Trigger: GGCAGAGCTGTTGAGGCCCAAGTACCGGGCACCCCA...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGGGTAAGTCCTCGTGCTGGGCCTCGAGCCAGCAACTCTAGTCAAATCCCAAGGAGCTTCAGAATCAGATaGCCTTCCCCAGACCCCACC +
Preference number: 5 (lower is better)
Translates to: RVSPRAGPRASNSSQIPRSFRIR*PSPDPT
Trigger: GGTGGGGTCTGGGGAAGGCAATCTGATTCTGAAGCT...CCTTGGGATTTGACTAGAGTTGCTGGCTCGAGGCCCAGCACGAGGACTTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACAAACCCACACTCAATTaGCTACATCTCCCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHKPTLN*LHLPGV
Trigger: CACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTT...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATCACTTGGCCTGGATTaGAGCCTGAGGCTCAGACTC +
Preference number: 5 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQSLGLD*SLRLRL
Trigger: GAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 90 bp AGGGTGCCCTTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTTCTCCATCCATGGTC +
Preference number: 5 (lower is better)
Translates to: RVPLTSVSSVRMLPD*GLSVWKSVPSPSMV
Trigger: GACCATGGATGGAGAAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAAGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
CDS TCA 90 bp AGGGTGCCCTTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTGCGGTAGGAGAAAAG +
Preference number: 5 (lower is better)
Translates to: RVPLTSVSSVRMLPD*GLSVWKSVPAVGEK
Trigger: CTTTTCTCCTACCGCAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAAGGGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493133.1
CDS CCA 90 bp TTTTCCTTTCCACTCCACTCCCTAGAATTCTGGAAGTGGGACTTCTaGTGCCAGGCCTTTGAGGCATTGGCAGAGACCCCAGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: FSFPLHSLEFWKWDF*CQAFEALAETPGSW
Trigger: CCAGGACCCTGGGGTCTCTGCCAATGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCAGAATTCTAGGGAGTGGAGTGGAAAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGCCTTCCAGGGTGCCCTaGACCTCAGTCTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VSASQGPRVCWKGKARAKPSRVP*TSVSSV
Trigger: AACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAGG...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAACCTTCCAGGGTGCCCTaGACCTCAGTCTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEPSRVP*TSVSSV
Trigger: AACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAGG...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCACAGGCCTTTGAGGCATaGGCAGAGACCCCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAQAFEA*AETPGS
Trigger: GGACCCTGGGGTCTCTGCCAATGCCTCAAAGGCCTG...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAAAGCTCTTTAGCTTCACGCTTGCCCTCCTTCTaGCTCCCCGACTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: KGPTMGTYTQEDESSLASRLPSF*LPDSST
Trigger: GGTGGAGGAGTCGGGGAGCAAGAAGGAGGGCAAGCG...TGAAGCTAAAGAGCTTTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp CCGGTAAGCTATGTCCTAAGCAGGGCCCAGTACCTTCTCCATCCATaGTCCCAGCTAATTCTTTCCCATCTGTCTTGGAGGGGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PVSYVLSRAQYLLHP*SQLILSHLSWRGCE
Trigger: CTCACAGCCCCTCCAAGACAGATGGGAAAGAATTAGCTGGGACCATGGATGGAGAAGGTACTGGGCCCTGCTTAGGACATAGCTTACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493133.1
CDS-3UTR CAA 90 bp GTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAAGAGGATGAATTCTCCTTGGCCAGCTaGTCCAGCAGAAGACCCATG +
Preference number: 5 (lower is better)
Translates to: VSMWVKGPTMGTYTQEDEFSLAS*SSRRPM
Trigger: CATGGGTCTTCTGCTGGACAAGCTGGCCAAGGAGAA...TTCATCCTCTTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATGGGCCCCGCAGCTCTaGGGCTCTGTGAGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPWAPQL*GSVSAC
Trigger: ACAAGCACTCACAGAGCCCAAGAGCTGCGGGGCCCA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGGGCTGGTGATTTTGCTCTACTGTGTGAAAGATATCTGAGGACACCAAACAAGTTCGGGCCCTGTCGCTaGCCCTCCTTCTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RAGDFALLCERYLRTPNKFGPCR*PSFLLP
Trigger: GGGGAGCAAGAAGGAGGGCAAGCGACAGGGCCCGAA...CTTGTTTGGTGTCCTCAGATATCTTTCACACAGTAGAGCAAAATCACCAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp ACACAAGCCCACATCCCAGGGCCTGGAGTATTTGCATGCATTTGCATAGACGGCTTCCCTCCACCGAGGTaGCTTCTGCTTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TQAHIPGPGVFACICIDGFPPPR*LLLFSR
Trigger: TCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGAA...GCCGTCTATGCAAATGCATGCAAATACTCCAGGCCCTGGGATGTGGGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGATATCTGAGGACACCAAACAAGCCAGGACAGAGTCCACCCTCCAGGAGTTAGGGCTCTGTGAGTGCTaGTCCTTCTTCCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: KISEDTKQARTESTLQELGLCEC*SFFPDL
Trigger: GAGGTCAGGGAAGAAGGACAAGCACTCACAGAGCCC...TAACTCCTGGAGGGTGGACTCTGTCCTGGCTTGTTTGGTGTCCTCAGATATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGCTCTGTGAGTGCTaGTCCTTCTTCCCTGACCTC +
Preference number: 5 (lower is better)
Translates to: LSLRLRLQNPHSICYISQGLCEC*SFFPDL
Trigger: GAGGTCAGGGAAGAAGGACAAGCACTCACAGAGCCC...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TCCCAAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTGCAACAGCACTTTATaGGGATCTGAGTCTACAGTT +
Preference number: 5 (lower is better)
Translates to: SQGTGQHVGQGAHYGDIHCNSTL*GSESTV
Trigger: AACTGTAGACTCAGATCCCAATAAAGTGCTGTTGCA...GTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAATGTCCTGGTTCTCCTaGGCCAGCTTGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAMSWFS*ASLSSR
Trigger: TCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACAT...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAATGTCCTGGTTCTCCTaGGCCAGCTTGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQMSWFS*ASLSSR
Trigger: TCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACAT...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAAAGCTTCAGAATCAGATaGCCTTCCCCAGACCCCACC +
Preference number: 5 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQSFRIR*PSPDPT
Trigger: GGTGGGGTCTGGGGAAGGCAATCTGATTCTGAAGCT...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCACCTTCCAGGGTGCCCTaGACCTCAGTCTCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SAPGRPHQSITGDTMYVSPSRVP*TSVSSV
Trigger: AACAGAGGAGACTGAGGTCAAGGGCACCCTGGAAGG...TGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CAA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATCTGATCCAAGCTGCTTaGGGGGTTGAAGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHLIQAA*GVEGRL
Trigger: GAGCCTGCCTTCAACCCCCAAAGCAGCTTGGATCAG...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CAA 90 bp TTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCATTCTCCTTGGCCAGCTaGTCCAGCAGAAGACCCATG +
Preference number: 5 (lower is better)
Translates to: FEPEAQTPKPTLNLLHLPFSLAS*SSRRPM
Trigger: CATGGGTCTTCTGCTGGACAAGCTGGCCAAGGAGAA...TGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp CACAGTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTATGTCCTGGTTCTCCTaGGCCAGCTTGTCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: HSAPGRPHQSITGDTMYVMSWFS*ASLSSR
Trigger: TCTGCTGGACAAGCTGGCCAAGGAGAACCAGGACAT...AACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCACTGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CAA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGTTCCCTCCACCGAGGTaGCTTCTGCTTTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LSLRLRLQNPHSICYISQFPPPR*LLLFSR
Trigger: TCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGAA...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp CTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGGGGTGGGCAGGGCTGGTGATTTaGCTCTACTGTGTGAAAGAT +
Preference number: 5 (lower is better)
Translates to: LRLRLQNPHSICYISQGWAGLVI*LYCVKD
Trigger: ATCTTTCACACAGTAGAGCAAAATCACCAGCCCTGC...CCACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCAAGGCAAGGGCAAAGAGTATTTGCATGCATTaGCATAGACGGCAACGCAGG +
Preference number: 5 (lower is better)
Translates to: VSASQGPRVCWKGKARAKSICMH*HRRQRR
Trigger: CCTGCGTTGCCGTCTATGCAAATGCATGCAAATACT...CTTTGCCCTTGCCTTGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGGCACCGGTCAGCATGTGGGTCAAGGGGCCCACTATGGGGACATACACTCAATGCAACAGCACTTTATaGGGATCTGAGTCTACAGTT +
Preference number: 5 (lower is better)
Translates to: KAPVSMWVKGPTMGTYTQCNSTL*GSESTV
Trigger: AACTGTAGACTCAGATCCCAATAAAGTGCTGTTGCA...TTGAGTGTATGTCCCCATAGTGGGCCCCTTGACCCACATGCTGACCGGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATGTCAGAAGACCCATGTTTaGCAGGCTGGGGACACTGTC +
Preference number: 5 (lower is better)
Translates to: APGRPHQSITGDTMYVSCQKTHV*QAGDTV
Trigger: GACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCTG...ACATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS-3UTR CAA 90 bp GTGCTCCAGGCAGACCACACCAATCAATCACAGGTGATACCATGTATGTTTCATTTCTCCTTGGCCAGCTaGTCCAGCAGAAGACCCATG +
Preference number: 5 (lower is better)
Translates to: VLQADHTNQSQVIPCMFHFSLAS*SSRRPM
Trigger: CATGGGTCTTCTGCTGGACAAGCTGGCCAAGGAGAA...ATGAAACATACATGGTATCACCTGTGATTGATTGGTGTGGTCTGCCTGGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368460.7
CDS GCA 90 bp ATGAAGTCCTCAAAGTCATCTACTTCATCATCATCACCTGTCTGTTaGACAGCCACCTCCTCCAAGCTGTCCTCCAGGGCATCCACAAAA +
Preference number: 5 (lower is better)
Translates to: MKSSKSSTSSSSPVC*TATSSKLSSRASTK
Trigger: TTTTGTGGATGCCCTGGAGGACAGCTTGGAGGAGGTGGCTGTGCAACAGACAGGTGATGATGATGAAGTAGATGACTTTGAGGACTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp GAACCAGCCTCCCTTTCTCTGAGGAAACTGAGAAACCCCAAAATATaGAGAATAGCTTTGTCCGGTAAGCTATGTCCTAAGCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: EPASLSLRKLRNPKI*RIALSGKLCPKQGP
Trigger: TGGGCCCTGCTTAGGACATAGCTTACCGGACAAAGCTATTCTCCATATTTTGGGGTTTCTCAGTTTCCTCAGAGAAAGGGAGGCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493133.1
CDS-3UTR CAA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTAAACCCACACTCAATTaGCTACATCTCCCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PKFPEINLPKITWPGFEPKPTLN*LHLPGV
Trigger: CACCCCTGGGAGATGTAGCAAATTGAGTGTGGGTTT...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp GAGCAAAAGGAGAAGTATCAGCTTCTCAAGGGCCTAGGGTTTGTTGGAAGGGCATTCCCAGAGATTAACTaGCCCAAGATCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: EQKEKYQLLKGLGFVGRAFPEIN*PKITWP
Trigger: AGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAA...TGCCCTTCCAACAAACCCTAGGCCCTTGAGAAGCTGATACTTCTCCTTTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp CCTGGATTTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATGCAGGGCTGGTGATTTaGCTCTACTGTGTGAAAGAT +
Preference number: 5 (lower is better)
Translates to: PGFEPEAQTPKPTLNLLHAGLVI*LYCVKD
Trigger: ATCTTTCACACAGTAGAGCAAAATCACCAGCCCTGC...ATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp AAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGAGTATTTGCATGCATTaGCATAGACGGCAACGCAGG +
Preference number: 5 (lower is better)
Translates to: KFPEINLPKITWPGFEPESICMH*HRRQRR
Trigger: CCTGCGTTGCCGTCTATGCAAATGCATGCAAATACT...CTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp CCAAAGTTCCCAGAGATTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTTTCCCAGAGATTAACTaGCCCAAGATCACTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PKFPEINLPKITWPGFEPFPEIN*PKITWP
Trigger: AGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAA...AGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAATCTCTGGGAACTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTAACTTGCCCAAGATCACTTGGCCTGGATTTGAGCCTGAGGCTCAGACTCCAACTTCCATCGCCTTTTTaGAGGATAAGAAACCCAAAG +
Preference number: 5 (lower is better)
Translates to: LTCPRSLGLDLSLRLRLQLPSPF*RIRNPK
Trigger: CTTTGGGTTTCTTATCCTCAAAAAAGGCGATGGAAG...TTGGAGTCTGAGCCTCAGGCTCAAATCCAGGCCAAGTGATCTTGGGCAAGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS-3UTR CAA 90 bp TTGAGCCTGAGGCTCAGACTCCAAAACCCACACTCAATTTGCTACATCTCCCAGCTTCCATCGCCTTTTTaGAGGATAAGAAACCCAAAG +
Preference number: 5 (lower is better)
Translates to: LSLRLRLQNPHSICYISQLPSPF*RIRNPK
Trigger: CTTTGGGTTTCTTATCCTCAAAAAAGGCGATGGAAG...CTGGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 90 bp TCCTTCTTCCCTGACCTCTTCTTCAGTGCTTTGTCTCCAAAGAAGTaGCTGAAGATGAAGTCCTCAAAGTCATCTACTTCATCATCATCA +
Preference number: 5 (lower is better)
Translates to: SFFPDLFFSALSPKK*LKMKSSKSSTSSSS
Trigger: TGATGATGATGAAGTAGATGACTTTGAGGACTTCATCTTCAGCCACTTCTTTGGAGACAAAGCACTGAAGAAGAGGTCAGGGAAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 72 bp CCCACAGCTTCCAGCACCTCGGGGTCTGGGAGGACCTaGCGCTCCACTTCCTCCATGGGCCCAGTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PTASSTSGSGRT*RSTSSMGPVSD
Trigger: GTCTGAGACTGGGCCCATGGAGGAAGTGGAGCGGCAGGTCCTCCCAGACCCCGAGGTGCTGGAAGCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000498553.5
CDS CCA 72 bp GGGGCTGTGAGGGGCCTGCAGGGCTCTCTCAGATTCTaGGTCCATCCTGGATGCCGGGCCCAGTGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: GAVRGLQGSLRF*VHPGCRAQCLH
Trigger: GTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCCCTCACAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
ENST00000493133.1
CDS GCA 72 bp GGGGCTAGCTCTGTGCCAAAGAAAGTCAGGCCCTCCTaGCGGGCACACTCGTCCACACCTGAGCAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GASSVPKKVRPS*RAHSSTPEQPW
Trigger: CCAGGGCTGCTCAGGTGTGGACGAGTGTGCCCGGCAGGAGGGCCTGACTTTCTTTGGCACAGAGCTAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp GGGCCTGCAGGGCTCTCTCAGATTCTGGGTCCATCCTaGATGCCGGGCCCAGTGTCTCCACTGGCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: GPAGLSQILGPS*MPGPVSPLAGS
Trigger: AGAGCCTGCCAGTGGAGACACTGGGCCCGGCATCCAGGATGGACCCAGAATCTGAGAGAGCCCTGCAGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000490230.1
ENST00000493133.1
CDS CCA 72 bp CAATCTGTGGCCCAGCTCAGCCAAGCCAGCATGAGCTaGGTCCCCGCGGCTGGCATCCTGCAAGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: QSVAQLSQASMS*VPAAGILQAPL
Trigger: GAGAGGAGCTTGCAGGATGCCAGCCGCGGGGACCCAGCTCATGCTGGCTTGGCTGAGCTGGGCCACAGATTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 72 bp AGGCCAGCTCCTGTTGCCGCACTGGGGCTAGCTCTGTaGCAAAGAAAGTCAGGCCCTCCTGCCGGGCACACT +
Preference number: 6 (lower is better)
Translates to: RPAPVAALGLAL*QRKSGPPAGHT
Trigger: AGTGTGCCCGGCAGGAGGGCCTGACTTTCTTTGGCACAGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp GCTCAGCCAAGCCAGCATGAGCTGGGTCCCCGCGGCTaGCATCCTGCAAGCTCCTCTCCAGATCCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: AQPSQHELGPRG*HPASSSPDPAV
Trigger: TACAGCAGGATCTGGAGAGGAGCTTGCAGGATGCCAGCCGCGGGGACCCAGCTCATGCTGGCTTGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp GGCCTCAACAGCTCTGCCCAGGATGGCAGGGGGTCATaGCTGTCCTTAGTCCCTTCCCTCCACCGAGGTTGC +
Preference number: 6 (lower is better)
Translates to: GLNSSAQDGRGS*LSLVPSLHRGC
Trigger: GCAACCTCGGTGGAGGGAAGGGACTAAGGACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp TGCCCGGTACTTGGGCCTCAACAGCTCTGCCCAGGATaGCAGGGGGTCATGGCTGTCCTTAGTCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: CPVLGPQQLCPG*QGVMAVLSPFP
Trigger: AGGGAAGGGACTAAGGACAGCCATGACCCCCTGCCATCCTGGGCAGAGCTGTTGAGGCCCAAGTACCGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp CCAGCTTGTCCAGCAGAAGACCCATGTTTTGCAGGCTaGGGACACTGTCAGGAGGCACTGGGGCCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: PACPAEDPCFAG*GHCQEALGPAA
Trigger: AGCTGCAGGCCCCAGTGCCTCCTGACAGTGTCCCCAGCCTGCAAAACATGGGTCTTCTGCTGGACAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000498553.5
CDS GCA 72 bp TGTTCCTTCTGCTTCAGGAAGCTGAGTTCTGGCTCCTaGTCCCTGGGGCCTTGCTCCCTGATGGCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: CSFCFRKLSSGS*SLGPCSLMALS
Trigger: TGACAAGGCCATCAGGGAGCAAGGCCCCAGGGAGCAGGAGCCAGAACTCAGCTTCCTGAAGCAGAAGGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 72 bp AAGAAAGCAGGTGAGAGGGGTAGCTCCTTGGTCAGCTaGCCAGCCCAGGGCAGCCGTGCCAAGTATGTTCTT +
Preference number: 6 (lower is better)
Translates to: KKAGERGSSLVS*PAQGSRAKYVL
Trigger: AAGAACATACTTGGCACGGCTGCCCTGGGCTGGGCAGCTGACCAAGGAGCTACCCCTCTCACCTGCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 72 bp TCCAGATCCTGCTGTACAGACCCCAGCAGCCGTCGCTaGCTCTCTAACTCTTGCCTTAATGCCTGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: SRSCCTDPSSRR*LSNSCLNACAS
Trigger: TGAGGCACAGGCATTAAGGCAAGAGTTAGAGAGGCAGCGACGGCTGCTGGGGTCTGTACAGCAGGATCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp CCACTCCACTCCCTAGAATTCTGGAAGTGGGACTTCTaGTGCCAGGCCTTTGAGGCATTGGCAGAGACCCCA +
Preference number: 6 (lower is better)
Translates to: PLHSLEFWKWDF*CQAFEALAETP
Trigger: TGGGGTCTCTGCCAATGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCAGAATTCTAGGGAGTGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 72 bp AGGGCATCCACAAAATCCCGGAAGCGGAGGCGGTCATaGCGGAAGATGCCATCCTCACCAAAGAAAGCAGGT +
Preference number: 6 (lower is better)
Translates to: RASTKSRKRRRS*RKMPSSPKKAG
Trigger: ACCTGCTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTTCCGGGATTTTGTGGATGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 72 bp TTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTCGGAGC +
Preference number: 6 (lower is better)
Translates to: LTSVSSVRMLPD*GLSVWKSVPRS
Trigger: GCTCCGAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498553.5
CDS GCA 72 bp GCCAAGTATGTTCTTAGCAGAGAGGCCAGCTCCTGTTaGCGCACTGGGGCTAGCTCTGTGCCAAAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: AKYVLSREASSC*RTGASSVPKKV
Trigger: GACTTTCTTTGGCACAGAGCTAGCCCCAGTGCGGCAACAGGAGCTGGCCTCTCTGCTAAGAACATACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS GCA 72 bp CAAAATCCCGGAAGCGGAGGCGGTCATGACGGAAGATaGCATCCTCACCAAAGAAAGCAGGTGAGAGGGGTA +
Preference number: 6 (lower is better)
Translates to: QNPGSGGGHDGR*HPHQRKQVRGV
Trigger: TACCCCTCTCACCTGCTTTCTTTGGTGAGGATGGCATCTTCCGTCATGACCGCCTCCGCTTCCGGGATTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CAA 72 bp GTCATGGCTGTCCTTAGTCCCTTCCCTCCACCGAGGTaGCTTCTGCTTTTCTCCAGAGGAGTGGAAGCTACC +
Preference number: 6 (lower is better)
Translates to: VMAVLSPFPPPR*LLLFSRGVEAT
Trigger: GGTAGCTTCCACTCCTCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGAAGGGACTAAGGACAGCCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS TCA 72 bp TTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTGCGGTA +
Preference number: 6 (lower is better)
Translates to: LTSVSSVRMLPD*GLSVWKSVPAV
Trigger: TACCGCAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493133.1
CDS TCA 72 bp TTGACCTCAGTCTCCTCTGTTAGAATGCTGCCAGACTaGGGGCTTTCAGTCTGGAAGAGCGTCCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LTSVSSVRMLPD*GLSVWKSVPSP
Trigger: TGGAGAAGGGACGCTCTTCCAGACTGAAAGCCCTCAGTCTGGCAGCATTCTAACAGAGGAGACTGAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368460.7
ENST00000368463.8
ENST00000368465.5
ENST00000490230.1
CDS GCA 72 bp CTGTCCTTAGTCCCTTCCCTCCACCGAGGTTGCTTCTaGTTTTCTCCAGAGGAGTGGAAGCTACCACTTTTC +
Preference number: 6 (lower is better)
Translates to: LSLVPSLHRGCF*FSPEEWKLPLF
Trigger: GAAAAGTGGTAGCTTCCACTCCTCTGGAGAAAAGCAGAAGCAACCTCGGTGGAGGGAAGGGACTAAGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp CACCACTTTTCCTTTCCACTCCACTCCCTAGAATTCTaGAAGTGGGACTTCTGGTGCCAGGCCTTTGAGGCA +
Preference number: 6 (lower is better)
Translates to: HHFSFPLHSLEF*KWDFWCQAFEA
Trigger: TGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCAGAATTCTAGGGAGTGGAGTGGAAAGGAAAAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp TTTTCCTTTCCACTCCACTCCCTAGAATTCTGGAAGTaGGACTTCTGGTGCCAGGCCTTTGAGGCATTGGCA +
Preference number: 6 (lower is better)
Translates to: FSFPLHSLEFWK*DFWCQAFEALA
Trigger: TGCCAATGCCTCAAAGGCCTGGCACCAGAAGTCCCACTTCCAGAATTCTAGGGAGTGGAGTGGAAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368463.8
ENST00000368465.5
CDS CCA 72 bp TATGTCCTAAGCAGGGCCCAGTACCTTCTCCATCCATaGTCCCAGCTAATTCTTTCCCATCTGTCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: YVLSRAQYLLHP*SQLILSHLSWR
Trigger: CCTCCAAGACAGATGGGAAAGAATTAGCTGGGACCATGGATGGAGAAGGTACTGGGCCCTGCTTAGGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493133.1
CDS CAA 90 bp CTTTCTCTGAGGAAACTGAGAAACCCCAAAATATGGAGAATAGCTTaGTCCGGTAAGCTATGTCCTAAGCAGGGCCCAGTACCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LSLRKLRNPKIWRIA*SGKLCPKQGPVPSP
Trigger: TGGAGAAGGTACTGGGCCCTGCTTAGGACATAGCTTACCGGACAAAGCTATTCTCCATATTTTGGGGTTTCTCAGTTTCCTCAGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493133.1