Pregenerated sensors for PBX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000206315, ENSG00000224952, ENSG00000236353

Ensembl transcript IDs: ENST00000461053.1, ENST00000461385.5, ENST00000461857.1, ENST00000462393.1, ENST00000471428.1, ENST00000473198.1, ENST00000478678.5, ENST00000479667.1, ENST00000480009.1, ENST00000480293.5, ENST00000485304.5, ENST00000487027.1, ENST00000488105.1, ENST00000489815.5, ENST00000491147.1, ENST00000494630.5, ENST00000495300.1, ENST00000496171.1, ENST00000497588.1, ENST00000498292.5, ENST00000498723.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTAGGGACCCAGAGACCCCAATACCCAGTGCTCAGTCCTCCTGGTaGTTCCTGGAGAGCCAAGTTCCCAGGCTTTGGTTCCTTCCCCAG	+
Preference number: 5 (lower is better) Translates to: LRDPETPIPSAQSSW*FLESQVPRLWFLPQ Trigger: CTGGGGAAGGAACCAAAGCCTGGGAACTTGGCTCTCCAGGAAGCACCAGGAGGACTGAGCACTGGGTATTGGGGTCTCTGGGTCCCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000462393.1 ENST00000473198.1 ENST00000480009.1 ENST00000488105.1 ENST00000496171.1 ENST00000497588.1 ENST00000498723.1
CDS CCA 90 bp	GGACTTAGGGACCCAGAGACCCCAATACCCAGTGCTCAGTCCTCCTaGTGCTTCCTGGAGAGCCAAGTTCCCAGGCTTTGGTTCCTTCCC	+
Preference number: 5 (lower is better) Translates to: GLRDPETPIPSAQSS*CFLESQVPRLWFLP Trigger: GGGAAGGAACCAAAGCCTGGGAACTTGGCTCTCCAGGAAGCACCAGGAGGACTGAGCACTGGGTATTGGGGTCTCTGGGTCCCTAAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000462393.1 ENST00000473198.1 ENST00000480009.1 ENST00000488105.1 ENST00000496171.1 ENST00000497588.1 ENST00000498723.1
CDS CCA 90 bp	CCTTGGCCACCCGTGGGAAGAAAGGCAGAACTAAGATCACTGGAATaGCCTCTGTCCCCTGACATCTCCAGCCTATCTCAGCTCGGTCCC	+
Preference number: 5 (lower is better) Translates to: PWPPVGRKAELRSLE*PLSPDISSLSQLGP Trigger: GGGACCGAGCTGAGATAGGCTGGAGATGTCAGGGGACAGAGGCCATTCCAGTGATCTTAGTTCTGCCTTTCTTCCCACGGGTGGCCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461385.5 ENST00000478678.5 ENST00000480293.5 ENST00000485304.5 ENST00000489815.5 ENST00000494630.5 ENST00000498292.5
CDS CAA 72 bp	GTCCCCCTGACTCCTTACTTTCCTCAGGGCCCCAAGTaGTCACACTCTAGCCCTATAATGAACAGGGTTCTG	+
Preference number: 6 (lower is better) Translates to: VPLTPYFPQGPK*SHSSPIMNRVL Trigger: CAGAACCCTGTTCATTATAGGGCTAGAGTGTGACAACTTGGGGCCCTGAGGAAAGTAAGGAGTCAGGGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000462393.1 ENST00000473198.1 ENST00000480009.1 ENST00000488105.1 ENST00000496171.1 ENST00000497588.1 ENST00000498723.1
CDS CAA 90 bp	CCTCAGAGGAAAGAGGTCTTGTATCCTAAAGTAGAGGAAATGGAGTaGGGGAAAGCCCTATTCGAGAGGAGATGGGCATCTGACCTGGGA	+
Preference number: 6 (lower is better) Translates to: PQRKEVLYPKVEEME*GKALFERRWASDLG Trigger: TCCCAGGTCAGATGCCCATCTCCTCTCGAATAGGGCTTTCCCCAACTCCATTTCCTCTACTTTAGGATACAAGACCTCTTTCCTCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461053.1 ENST00000461857.1 ENST00000471428.1 ENST00000479667.1 ENST00000487027.1 ENST00000491147.1 ENST00000495300.1
CDS CAA 90 bp	ATCCACAAAATAACATTCCAACACACAGAAAGAGCAGGCTGTTCCTaGGCCACCCGTGGGAAGAAAGGCAGAACTAAGATCACTGGAATG	+
Preference number: 6 (lower is better) Translates to: IHKITFQHTERAGCS*ATRGKKGRTKITGM Trigger: CATTCCAGTGATCTTAGTTCTGCCTTTCTTCCCACGGGTGGCCAAGGAACAGCCTGCTCTTTCTGTGTGTTGGAATGTTATTTTGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461385.5 ENST00000478678.5 ENST00000480293.5 ENST00000485304.5 ENST00000489815.5 ENST00000494630.5 ENST00000498292.5
CDS CAA 72 bp	AAAGAGGTCTTGTATCCTAAAGTAGAGGAAATGGAGTaGGGGAAAGCCCTATTCGAGAGGAGATGGGCATCT	+
Preference number: 6 (lower is better) Translates to: KEVLYPKVEEME*GKALFERRWAS Trigger: AGATGCCCATCTCCTCTCGAATAGGGCTTTCCCCAACTCCATTTCCTCTACTTTAGGATACAAGACCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461053.1 ENST00000461857.1 ENST00000471428.1 ENST00000479667.1 ENST00000487027.1 ENST00000491147.1 ENST00000495300.1