RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PBX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185630

Ensembl transcript IDs: ENST00000340699.7, ENST00000367897.5, ENST00000420696.7, ENST00000465089.2, ENST00000468104.5, ENST00000474046.1, ENST00000482110.5, ENST00000485769.5, ENST00000496120.6, ENST00000498497.2, ENST00000540236.3, ENST00000558837.5, ENST00000559240.5, ENST00000559560.1, ENST00000559578.1, ENST00000560469.5, ENST00000560641.5, ENST00000605467.1, ENST00000612123.3, ENST00000627490.2

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAGGTCCTGGAAGCCCCAGACACATAC +
Preference number: 1 (lower is better)
Translates to: LVFLMIRSCVCHSGK*TLVGLQVLEAPDTY
Trigger: GTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 90 bp TTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCCTaGCCGGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCA +
Preference number: 1 (lower is better)
Translates to: FSTCCSRVLPCCLTS*PGTNLVEMKLKNVA
Trigger: TGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 90 bp GTTTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: VYTGNLVFLMIRSCV*HSGKCTLVGLQVLE
Trigger: TTCCAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR TCA 90 bp TGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAG +
Preference number: 1 (lower is better)
Translates to: CRSWKPQTHTASLCQ*PSLRVTNSLSRAQK
Trigger: CTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR TCA 90 bp TCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAATGTaGCAGGGACCAAGTATGTACAAGGCAACATATTGGGTTCAAGTG +
Preference number: 1 (lower is better)
Translates to: SGSHTSPWKPPKQSM*QGPSMYKATYWVQV
Trigger: CACTTGAACCCAATATGTTGCCTTGTACATACTTGGTCCCTGTCACATTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR GCA 90 bp ATTTATGACTGTAGTGCCAAGCAGAATTTCCATGTTCTTGCTAGCTaGCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCC +
Preference number: 1 (lower is better)
Translates to: IYDCSAKQNFHVLAS*PFSPLRVSYFSLEA
Trigger: GGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATGGAAATTCTGCTTGGCACTACAGTCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR GCA 90 bp CTCTTCTTGTTTCCAAGAGAACCCTTTTGTCTCTCTTTCGTACTTTaGCCTAAGTCAAGCAAATGTGATTCAACCATGTTCTTGCGTGGG +
Preference number: 1 (lower is better)
Translates to: LFLFPREPFCLSFVL*PKSSKCDSTMFLRG
Trigger: CCCACGCAAGAACATGGTTGAATCACATTTGCTTGACTTAGGGCAAAGTACGAAAGAGAGACAAAAGGGTTCTCTTGGAAACAAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR GCA 90 bp TCGTACTTTGCCCTAAGTCAAGCAAATGTGATTCAACCATGTTCTTaGGTGGGTAGTTTCATTATATTCCTGCCACTAAGATGGAGTTCT +
Preference number: 1 (lower is better)
Translates to: SYFALSQANVIQPCS*VGSFIIFLPLRWSS
Trigger: AGAACTCCATCTTAGTGGCAGGAATATAATGAAACTACCCACGCAAGAACATGGTTGAATCACATTTGCTTGACTTAGGGCAAAGTACGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR TCA 90 bp TTCAGGGACATTACTTCCCCTGACTTCGCATTTACAGATTGGATATaGACAAAATCAACTTCTCAGTCTCTCACAAGACTCTTAGTAAGC +
Preference number: 1 (lower is better)
Translates to: FRDITSPDFAFTDWI*TKSTSQSLTRLLVS
Trigger: GCTTACTAAGAGTCTTGTGAGAGACTGAGAAGTTGATTTTGTTCATATCCAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCCCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCCTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LPILTPQGLILLPGSLPSLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR GCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 2 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTATCCTTCAGTGATATaGGAGAGGGCGGGGACCCCG +
Preference number: 2 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVYPSVI*ERAGTP
Trigger: CGGGGTCCCCGCCCTCTCTCATATCACTGAAGGATA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 2 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612123.3
3UTR-3UTR GCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAACAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAATATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 2 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGACAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 2 (lower is better)
Translates to: LLCLLIASTSSLTASALGQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: LPILTPQGLILLPGSLPSMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR GCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 2 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR GCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCCATATTGGGTTCAAGTaGAAACTAAGGGAACCAGGG +
Preference number: 2 (lower is better)
Translates to: LPILTPQGLILLPGSLPSHIGFK*KLREPG
Trigger: CCCTGGTTCCCTTAGTTTGCACTTGAACCCAATATG...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 2 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCACAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RRLLLCLLIASTSSLTASQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 2 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 2 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 2 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612123.3
3UTR-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: ITFPFPMILRSSNEASKSRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 2 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 2 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACTGGGCCTGCAGGTCCTaGAAGCCCCAGACACATACT +
Preference number: 2 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDWACRS*KPQTHT
Trigger: AGTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCA...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTATCCTTCAGTGATATaGGAGAGGGCGGGGACCCCG +
Preference number: 2 (lower is better)
Translates to: YMASRESEDVRWYMCLHVYPSVI*ERAGTP
Trigger: CGGGGTCCCCGCCCTCTCTCATATCACTGAAGGATA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGTATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 2 (lower is better)
Translates to: RRLLLCLLIASTSSLTASGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACTGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDCHSGK*TLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCA...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 2 (lower is better)
Translates to: YMASRESEDVRWYMCLHVYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 2 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 2 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAATTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 2 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR TCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: LESLIPSLGLKRHSATVIENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTGGGAAAGTGAAGATGTaGGATGGTACATGTGCCTAC +
Preference number: 2 (lower is better)
Translates to: ITFPFPMILRSSNEASKSGKVKM*DGTCAY
Trigger: GTAGGCACATGTACCATCTCACATCTTCACTTTCCC...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: ITFPFPMILRSSNEASKSIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: ITFPFPMILRSSNEASKSSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: LESLIPSLGLKRHSATVISVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 2 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 2 (lower is better)
Translates to: KRHSATVINVGNCIWHLGQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 2 (lower is better)
Translates to: ITFPFPMILRSSNEASKSLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR GCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 2 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: LESLIPSLGLKRHSATVIMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR TCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTGGACATTACTTCCCCTaGCTTCGCATTTACAGATTG +
Preference number: 2 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSGHYFP*LRIYRL
Trigger: CAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCC...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTAGTGAAGATGTGAGATaGTACATGTGCCTACATGTG +
Preference number: 2 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTSEDVR*YMCLHV
Trigger: CACATGTAGGCACATGTACCATCTCACATCTTCACT...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR CAA 90 bp CAAGGTACTGATATTAACCAGAAGTTACAACAAGAAAACCATTTATaGTCCCTAGATGGCATGAACCCGTTTATTTCAGGGACATTACTT +
Preference number: 2 (lower is better)
Translates to: QGTDINQKLQQENHL*SLDGMNPFISGTLL
Trigger: AAGTAATGTCCCTGAAATAAACGGGTTCATGCCATCTAGGGACAATAAATGGTTTTCTTGTTGTAACTTCTGGTTAATATCAGTACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 2 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR GCA 72 bp GAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGAACCAACCTAGTGGAG +
Preference number: 3 (lower is better)
Translates to: EFSTCCSRVLPC*LTSCPGTNLVE
Trigger: CTCCACTAGGTTGGTTCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp CTCATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAGGTCCTGGAAGCCCCA +
Preference number: 3 (lower is better)
Translates to: LMIRSCVCHSGK*TLVGLQVLEAP
Trigger: TGGGGCTTCCAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp TGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCCTaGCCGGGAACCAACCTAGTGGAGATGAAACTGAAA +
Preference number: 3 (lower is better)
Translates to: CCSRVLPCCLTS*PGTNLVEMKLK
Trigger: TTTCAGTTTCATCTCCACTAGGTTGGTTCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp GGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: GNLVFLMIRSCV*HSGKCTLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 3 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: RRLLLCLLIASTSSLTASSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 3 (lower is better)
Translates to: LPILTPQGLILLPGSLPSKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CAA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTATCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 3 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 3 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR TCA 72 bp TGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACTAATTCCCTCTCTCGG +
Preference number: 3 (lower is better)
Translates to: WKPQTHTASLCQ*PSLRVTNSLSR
Trigger: CCGAGAGAGGGAATTAGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp AGAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGG +
Preference number: 3 (lower is better)
Translates to: REEKETLIVFAD*FDLQSDRFSVG
Trigger: CCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR CCA 72 bp TGCTCCAGAGGTGGTGGGAACAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: CSRGGGNKSSLH*KPGLPHDQVLC
Trigger: ACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTTGTTCCCACCACCTCTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 3 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 3 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAACAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 3 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR TCA 72 bp GGATTGCCTGTTAACATAGGGAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCAAACCACCAGCATGAA +
Preference number: 3 (lower is better)
Translates to: GLPVNIGSEGFE*GKFGSSNHQHE
Trigger: TTCATGCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGAATCCCTCACTCCCTATGTTAACAGGCAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR CCA 72 bp AGAATCAAGTCCATTAAAGACATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCAGAGGTGGTGGGAACA +
Preference number: 3 (lower is better)
Translates to: RIKSIKDIVSTV*GSLSAPEVVGT
Trigger: TGTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCATACAGTACTTACAATGTCTTTAATGGACTTGATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 3 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612123.3
3UTR-3UTR CAA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 3 (lower is better)
Translates to: LESLIPSLGLKRHSATVIRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 3 (lower is better)
Translates to: LIPSLGLKRHSATVINVGKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 3 (lower is better)
Translates to: KRHSATVINVGNCIWHLGSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp GCCCTAAGTCAAGCAAATGTGATTCAACCATGTTCTTaGGTGGGTAGTTTCATTATATTCCTGCCACTAAGA +
Preference number: 3 (lower is better)
Translates to: ALSQANVIQPCS*VGSFIIFLPLR
Trigger: TCTTAGTGGCAGGAATATAATGAAACTACCCACGCAAGAACATGGTTGAATCACATTTGCTTGACTTAGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CAA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 3 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR GCA 72 bp TTTCCAAGAGAACCCTTTTGTCTCTCTTTCGTACTTTaGCCTAAGTCAAGCAAATGTGATTCAACCATGTTC +
Preference number: 3 (lower is better)
Translates to: FPREPFCLSFVL*PKSSKCDSTMF
Trigger: GAACATGGTTGAATCACATTTGCTTGACTTAGGGCAAAGTACGAAAGAGAGACAAAAGGGTTCTCTTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
3UTR-3UTR CAA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 3 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 3 (lower is better)
Translates to: KRHSATVINVGNCIWHLGRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR-3UTR CAA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACACAAATACACATTCCCTaGAGTTTCTTCAGTGGCATC +
Preference number: 3 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTQIHIP*SFFSGI
Trigger: GATGCCACTGAAGAAACTCAAGGGAATGTGTATTTG...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTGGTGGTGTGTGGGCTaGGGGGTAACGGGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLWWCVG*GVTGFP
Trigger: CGGGAACCCCGTTACCCCCCAGCCCACACACCACCA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS-3UTR GCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCCTCCGGCCCCATCCTaGAAGTGCTGGGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLPPAPS*KCWDRP
Trigger: CGGCCTGTCCCAGCACTTGCAGGATGGGGCCGGAGG...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR TCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGILRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGIMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612123.3
CDS-3UTR TCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCTCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGISSRGW*TRCRPA
Trigger: AGCAGGCCTGCAACGAGTTCACCACCCACGTGATGA...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGAGCCGAGTTGGGAGTTaGGGGCGAGTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLSRVGS*GRVSLA
Trigger: AGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTATCCTTCAGTGATATaGGAGAGGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLYPSVI*ERAGTP
Trigger: CGGGGTCCCCGCCCTCTCTCATATCACTGAAGGATA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLSSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCTCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSISTDALRTVHLTGCESSSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACCTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: LPILTPQGLILLPGSLPSQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTCCTCCGTGTCTCTaGAAACTCCAGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPPPPCL*KLQQPR
Trigger: ACGGGGCTGCTGGAGTTTGCAGAGACACGGAGGAGG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLCHSGK*TLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCCCTCGGCTCGGCTCCTaGGAAGCACCAAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LPILTPQGLILLPGSLPSPRLGS*EAPRLF
Trigger: AAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGG...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCTTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: TSISTDALRTVHLTGCESLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAACCTCCGGCCCCATCCTaGAAGTGCTGGGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSHISAWAITLSITTLLQPPAPS*KCWDRP
Trigger: CGGCCTGTCCCAGCACTTGCAGGATGGGGCCGGAGG...TTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCGCATGTTTTCTGGCCTaGGCCTCATCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGIACFLA*ASSKLW
Trigger: CCAGAGTTTGGATGAGGCGCAGGCCAGAAAACATGC...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367897.5
CDS-3UTR GCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGIGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGCGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFIPTPA*ECISLG
Trigger: GCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGAT...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR CCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVIPTPA*ECISLG
Trigger: GCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGAT...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR CCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAATCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGRESSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGTCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLSSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTTTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTTCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLSSRGW*TRCRPA
Trigger: AGCAGGCCTGCAACGAGTTCACCACCCACGTGATGA...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTAGCCGAGTTGGGAGTTaGGGGCGAGTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLSRVGS*GRVSLA
Trigger: AGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLCGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTTATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCACCTGGTCTTCCTCATaGTCAGGTCCTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: LPILTPQGLILLPGSLPSTWSSS*SGPVYA
Trigger: GGCATACACAGGACCTGATCATGAGGAAGACCAGGT...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTGCATCAGCCTGGGCTaGTCGTCCATCTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVCISLG*SSISKG
Trigger: GCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGIVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGAGGAGATTCATCACGTaGGTGGTGAACTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLRRFIT*VVNSLQ
Trigger: CTGCAACGAGTTCACCACCCACGTGATGAATCTCCT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCTCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: TSISTDALRTVHLTGCESEGELA*LPWADT
Trigger: TGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTC...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGIDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCCCGGGATGCGATTGCTaGGAGATCAGTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LPILTPQGLILLPGSLPSPGCDC*EISWRY
Trigger: ATACCTCCAACTGATCTCCCAGCAATCGCATCCCGG...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCTGGGCCTGCAGGTCCTaGAAGCCCCAGACACATACT +
Preference number: 4 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFWACRS*KPQTHT
Trigger: AGTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCA...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTTTGGCTTCCATGGGCTaGCACATTGGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPLASMG*HIGSSD
Trigger: GTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAA...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVCGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTACTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLTPAWE*ISLGCS
Trigger: CGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGT...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCGCATGTTTTCTGGCCTaGGCCTCATCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLACFLA*ASSKLW
Trigger: CCAGAGTTTGGATGAGGCGCAGGCCAGAAAACATGC...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGCAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVCHSGK*TLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGAACCAGTTTGATACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: ASTSSLTASALGEKPSLLNQFDT*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTATCAAACTGGTT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCCGGGATGCGATTGCTaGGAGATCAGTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLPGCDC*EISWRY
Trigger: ATACCTCCAACTGATCTCCCAGCAATCGCATCCCGG...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAATGGGCCTGCAGGTCCTaGAAGCCCCAGACACATACT +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREWACRS*KPQTHT
Trigger: AGTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCA...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGTGGGCCTGCAGGTCCTaGAAGCCCCAGACACATACT +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLWACRS*KPQTHT
Trigger: AGTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCA...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTTTGGCTTCCATGGGCTaGCACATTGGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLLASMG*HIGSSD
Trigger: GTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAA...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTTGGCTTCCATGGGCTaGCACATTGGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVLASMG*HIGSSD
Trigger: GTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCACCTGGTCTTCCTCATaGTCAGGTCCTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVTWSSS*SGPVYA
Trigger: GGCATACACAGGACCTGATCATGAGGAAGACCAGGT...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCACCTGGTCTTCCTCATaGTCAGGTCCTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFTWSSS*SGPVYA
Trigger: GGCATACACAGGACCTGATCATGAGGAAGACCAGGT...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGCTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCACTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCACGGCTCTTCCTCTTCTaGTCCTCGGCTCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASRLFLF*SSARLL
Trigger: CAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCG...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGTPAWE*ISLGCS
Trigger: CGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGT...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCATGTCTCCAATGTCCTaGTTCCTCCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSMSPMS*FLPPSP
Trigger: GGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACAT...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp CACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAAATGTCTCCAATGTCCTaGTTCCTCCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HSHISAWAITLSITTLLQMSPMS*FLPPSP
Trigger: GGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACAT...TTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSIPTPA*ECISLG
Trigger: GCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGAT...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR CCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQEGELA*LPWADT
Trigger: TGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTC...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCTCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSSSRGW*TRCRPA
Trigger: AGCAGGCCTGCAACGAGTTCACCACCCACGTGATGA...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAATTGGCTTCCATGGGCTaGCACATTGGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQLASMG*HIGSSD
Trigger: GTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAA...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAAGCCGAGTTGGGAGTTaGGGGCGAGTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGSRVGS*GRVSLA
Trigger: AGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCT...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGGTGACTGCACGCTCATaGACAAATCTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLVTARS*TNLQSL
Trigger: CAAACTCTGGAGATTTGTTCATGAGCGTGCAGTCAC...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAAAGGGTATCCACCTGTaGTTGCACGTTGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREKGIHL*LHVGSN
Trigger: GTTGGAGCCAACGTGCAATCACAGGTGGATACCCTT...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGAAGGGTATCCACCTGTaGTTGCACGTTGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQKGIHL*LHVGSN
Trigger: GTTGGAGCCAACGTGCAATCACAGGTGGATACCCTT...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGGGGAAAGTGAAGATGTaGGATGGTACATGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLGKVKM*DGTCAY
Trigger: GTAGGCACATGTACCATCTCACATCTTCACTTTCCC...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPASLCQ*PSLRVT
Trigger: AGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGC...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTCCTCCGGCCCCATCCTaGAAGTGCTGGGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGPPAPS*KCWDRP
Trigger: CGGCCTGTCCCAGCACTTGCAGGATGGGGCCGGAGG...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTCCTCCGGCCCCATCCTaGAAGTGCTGGGACAGGCCG +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSPPAPS*KCWDRP
Trigger: CGGCCTGTCCCAGCACTTGCAGGATGGGGCCGGAGG...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTATGTCTCCAATGTCCTaGTTCCTCCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAMSPMS*FLPPSP
Trigger: GGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACAT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: TSISTDALRTVHLTGCESIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612123.3
CDS-3UTR GCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGCATGTTCTTGCTAGCTaGCCATTCTCACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLHVLAS*PFSPLR
Trigger: CCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGCATGTTCTTGCTAGCTaGCCATTCTCACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQHVLAS*PFSPLR
Trigger: CCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTAACCAGTTTGATACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPNQFDT*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTATCAAACTGGTT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVLYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAACCGGGATGCGATTGCTaGGAGATCAGTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREPGCDC*EISWRY
Trigger: ATACCTCCAACTGATCTCCCAGCAATCGCATCCCGG...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTCTTATTGTGTTTGCTaGTTGCTTCGACCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLSYCVC*LLRPPV
Trigger: GACTGGAGGTCGAAGCAATCAGCAAACACAATAAGA...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTCTTATTGTGTTTGCTaGTTGCTTCGACCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLSYCVC*LLRPPV
Trigger: GACTGGAGGTCGAAGCAATCAGCAAACACAATAAGA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACCACTCCGGGCCAGAGTaGTCTCAAAGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNHSGPE*SQRGWA
Trigger: AGCCCACCCCCTTTGAGATCACTCTGGCCCGGAGTG...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR TCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATATCCTTCAGTGATATaGGAGAGGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASYPSVI*ERAGTP
Trigger: CGGGGTCCCCGCCCTCTCTCATATCACTGAAGGATA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVASLCQ*PSLRVT
Trigger: AGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGC...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTACTGTATGGGGCTCCCTaGGTGCTCCAGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVLYGAP*VLQRWW
Trigger: CCACCACCTCTGGAGCACTCAGGGAGCCCCATACAG...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDTPAWE*ISLGCS
Trigger: CGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGT...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTAAGGGGGTGGGCTGTTaGAAAAGCCAGATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAKGVGC*KSQISP
Trigger: GGGGGAGATCTGGCTTTTGCAACAGCCCACCCCCTT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp CAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAAATAAGGGGGTGGGCTGTTaGAAAAGCCAGATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: QPHLGMGDYTFDNNAPSNKGVGC*KSQISP
Trigger: GGGGGAGATCTGGCTTTTGCAACAGCCCACCCCCTT...ATTTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTACGTGTCCTTCCCTGCTaGCTGACTTCCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVRVLPC*LTSCPG
Trigger: TCCCGGGCAGGAAGTCAGGCAGCAGGGAAGGACACG...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCTTAAAGCATGTTTTCTaGCCTGCGCCTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: TSISTDALRTVHLTGCESLKHVF*PAPHPN
Trigger: GTTTGGATGAGGCGCAGGCCAGAAAACATGCTTTAA...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367897.5
CDS-3UTR CCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACTTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTTAGCTTGGCTTCCATaGGCTGACACATTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVLAWLP*ADTLVA
Trigger: TGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTACCGGGATGCGATTGCTaGGAGATCAGTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLPGCDC*EISWRY
Trigger: ATACCTCCAACTGATCTCCCAGCAATCGCATCCCGG...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCTCTTTAGAGGATGGTaGGAGGATGAGGAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSLFRGW*EDEEGE
Trigger: CTCCCCCTCCTCATCCTCCCACCATCCTCTAAAGAG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCATTTCCAAACCAGTTTaGTACCTGGGAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLISKPV*YLGDCD
Trigger: ATCACAGTCTCCCAGGTATCAAACTGGTTTGGAAAT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGATTTCCAAACCAGTTTaGTACCTGGGAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLISKPV*YLGDCD
Trigger: ATCACAGTCTCCCAGGTATCAAACTGGTTTGGAAAT...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASCGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCTCTTATTGTGTTTGCTaGTTGCTTCGACCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVSYCVC*LLRPPV
Trigger: GACTGGAGGTCGAAGCAATCAGCAAACACAATAAGA...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGATATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAGGGAAAGTGAAGATGTaGGATGGTACATGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREGKVKM*DGTCAY
Trigger: GTAGGCACATGTACCATCTCACATCTTCACTTTCCC...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCACCTGGTCTTCCTCATaGTCAGGTCCTGTGTATGCC +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSTWSSS*SGPVYA
Trigger: GGCATACACAGGACCTGATCATGAGGAAGACCAGGT...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNTPAWE*ISLGCS
Trigger: CGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGT...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLRISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGCAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACCCTCCTCCGTGTCTCTaGAAACTCCAGCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNPPPCL*KLQQPR
Trigger: ACGGGGCTGCTGGAGTTTGCAGAGACACGGAGGAGG...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTTCCCCATTGAGTGACTaGACGCTCATGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLSPLSD*TLMNKS
Trigger: AGATTTGTTCATGAGCGTGCAGTCACTCAATGGGGA...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR GCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGTTCAGTGGCATCCCCTaGTCCCCTGAGCACACACAG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLFSGIP*SPEHTQ
Trigger: CTGTGTGTGCTCAGGGGAGCAGGGGATGCCACTGAA...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAAACCAGTTTGATACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGRENQFDT*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTATCAAACTGGTT...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAEGELA*LPWADT
Trigger: TGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTC...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPKSSLH*KPGLPH
Trigger: ATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTT...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCATTTCCAAACCAGTTTaGTACCTGGGAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFISKPV*YLGDCD
Trigger: ATCACAGTCTCCCAGGTATCAAACTGGTTTGGAAAT...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAATCTTATTGTGTTTGCTaGTTGCTTCGACCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGRESYCVC*LLRPPV
Trigger: GACTGGAGGTCGAAGCAATCAGCAAACACAATAAGA...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAGTGACTGCACGCTCATaGACAAATCTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLVTARS*TNLQSL
Trigger: CAAACTCTGGAGATTTGTTCATGAGCGTGCAGTCAC...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTAAGGGTATCCACCTGTaGTTGCACGTTGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAKGIHL*LHVGSN
Trigger: GTTGGAGCCAACGTGCAATCACAGGTGGATACCCTT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTATCCTTCAGTGATATaGGAGAGGGCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLYPSVI*ERAGTP
Trigger: CGGGGTCCCCGCCCTCTCTCATATCACTGAAGGATA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAGGACATTACTTCCCCTaGCTTCGCATTTACAGATTG +
Preference number: 4 (lower is better)
Translates to: VFADCFDLQSDRFSVGREGHYFP*LRIYRL
Trigger: CAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCC...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTGCATGTTTTCTGGCCTaGGCCTCATCCAAACTCTGG +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAACFLA*ASSKLW
Trigger: CCAGAGTTTGGATGAGGCGCAGGCCAGAAAACATGC...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTCAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCACAGCCGGGATGCGATTaGTGGGAGATCAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPQPGCD*WEISWR
Trigger: CCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTG...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGTCCCCATTGAGTGACTaGACGCTCATGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLSPLSD*TLMNKS
Trigger: AGATTTGTTCATGAGCGTGCAGTCACTCAATGGGGA...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000540236.3
CDS-3UTR GCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGTGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLCHSGK*TLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCA...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAACATATTGGGTTCAAGTaGAAACTAAGGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQHIGFK*KLREPG
Trigger: CCCTGGTTCCCTTAGTTTGCACTTGAACCCAATATG...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTCTCTTTCGTACTTTaGCCTAAGTCAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPLSFVL*PKSSKC
Trigger: ACATTTGCTTGACTTAGGGCAAAGTACGAAAGAGAG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACCCTCGGCTCGGCTCCTaGGAAGCACCAAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNPRLGS*EAPRLF
Trigger: AAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGG...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSLYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTCCGGGATGCGATTGCTaGGAGATCAGTTGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAPGCDC*EISWRY
Trigger: ATACCTCCAACTGATCTCCCAGCAATCGCATCCCGG...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGAACCACCTTCCCACTTaGCGAAAAGAAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLNHLPT*RKEIRA
Trigger: AGCTCTGATTTCTTTTCGCCAAGTGGGAAGGTGGTT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCATGGGCCTGCAGGTCCTaGAAGCCCCAGACACATACT +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPWACRS*KPQTHT
Trigger: AGTATGTGTCTGGGGCTTCCAGGACCTGCAGGCCCA...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPKSSLH*KPGLPH
Trigger: ATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: IASTSSLTASALGEKPSLKSSLH*KPGLPH
Trigger: ATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTTCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVISSRGW*TRCRPA
Trigger: AGCAGGCCTGCAACGAGTTCACCACCCACGTGATGA...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCATGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPCGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCACACTCCGGGCCAGAGTaGTCTCAAAGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAHSGPE*SQRGWA
Trigger: AGCCCACCCCCTTTGAGATCACTCTGGCCCGGAGTG...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR TCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTCCCAAGCAGTCAATGTaGCAGGGACCAAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAPKQSM*QGPSMY
Trigger: GTACATACTTGGTCCCTGTCACATTGACTGCTTGGG...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAAAATACACATTCCCTTaGGTTTCTTCAGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQKYTFP*VSSVAS
Trigger: GGATGCCACTGAAGAAACTCAAGGGAATGTGTATTT...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACCAGTCCGGTCTCCTTTaGAAGGCAGAAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNQSGLL*KAEMGS
Trigger: GGAGCCCATTTCTGCCTTGCAAAGGAGACCGGACTG...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGATGTCTCCAATGTCCTaGTTCCTCCCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQMSPMS*FLPPSP
Trigger: GGGGGAGGGCGGGAGGAAGCAGGACATTGGAGACAT...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000559240.5
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACGGGGTAGTAGCATCCTaGCAACCTCCATTAGCACTG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDGVVAS*QPPLAL
Trigger: CAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCC...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTCAGGGTCAGCCGGGATaGGATTGCTGGGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVIQGQPG*DCWEIS
Trigger: ACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTG...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACGTATCCACCTGTGATTaGACGTTGGCTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDVSTCD*TLAPTW
Trigger: CCAGGTTGGAGCCAACGTGCAATCACAGGTGGATAC...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR GCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCTTTCCAAACCCATCCTaGTGCTCTCAGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSFPNPS*CSQCSP
Trigger: AGGAGAACACTGAGAGCAGCAGGATGGGTTTGGAAA...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACCGGCGCTTAAATCTGTaGCTTAATCCTTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDRRLNL*LNPFAN
Trigger: ATTTGCAAAAGGATTAAGCCACAGATTTAAGCGCCG...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATCCAGCCGCATCAGCTaGGGGTCTGTGGGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADASSRIS*GSVGSS
Trigger: GGAGGAACCCACAGACCCCCAGCTGATGCGGCTGGA...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGAGGAGATTCATCACGTaGGTGGTGAACTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWRRFIT*VVNSLQ
Trigger: CTGCAACGAGTTCACCACCCACGTGATGAATCTCCT...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATTTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTAGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVEGELA*LPWADT
Trigger: TGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTC...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACA +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVEGELA*LPWADT
Trigger: TGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTC...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTALYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTACAAGGCAACATATTaGGTTCAAGTGCAAACTAAG +
Preference number: 4 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLYKATY*VQVQTK
Trigger: CTTAGTTTGCACTTGAACCCAATATGTTGCCTTGTA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGTATTCAGGCCACATCTaGAGTCACTCTTCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLYSGHI*SHSSCF
Trigger: GAAACAAGAAGAGTGACTCCAGATGTGGCCTGAATA...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp CACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAAAGCCACATCTCGGCATaGGCGATTACACTTTCGATA +
Preference number: 4 (lower is better)
Translates to: HSHISAWAITLSITTLLQSHISA*AITLSI
Trigger: TATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCT...TTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTCGAAGGGTATCCACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLRRVST*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTGGATACCCTTCG...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559240.5
CDS-3UTR TCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTACTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACCAAATCTCCAGAGTTTaGCATGTTAAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDQISRV*HVKRTG
Trigger: TCCAGTTCTTTTAACATGTCAAACTCTGGAGATTTG...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTACAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTATATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGATTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCAGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTGCCCCAGACACATACTaGTTCTCTGTGTCAGTGACC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLAPDTY*FSVSVT
Trigger: GGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGC...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTACTTGGCAAATGTACTaGACGGGCGTCAATTCCATG +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTATWQMY*TGVNSM
Trigger: CATGGAATTGACGCCCGTGCAGTACATTTGCCAAGT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGAGGAGATTCATCACGTaGGTGGTGAACTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLRRFIT*VVNSLQ
Trigger: CTGCAACGAGTTCACCACCCACGTGATGAATCTCCT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTTAGCTTGGCTTCCATaGGCTGACACATTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTALAWLP*ADTLVA
Trigger: TGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAA...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGTTAGCTTGGCTTCCATaGGCTGACACATTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWLAWLP*ADTLVA
Trigger: TGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAA...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDLYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGGGTGGGGATAAGGGCTaGTGGGGAAGGGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQGGDKG*WGRVLT
Trigger: AGTCAACACCCTTCCCCACCAGCCCTTATCCCCACC...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCAACCATGTTCTTGCGTaGGTAGTTTCATTATATTCC +
Preference number: 4 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVNHVLA*VVSLYS
Trigger: GGAATATAATGAAACTACCCACGCAAGAACATGGTT...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTCTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTTGGCTTCCATGGGCTaGCACATTGGTAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSLASMG*HIGSSD
Trigger: GTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAA...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTAGCCGAGTTGGGAGTTaGGGGCGAGTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSSRVGS*GRVSLA
Trigger: AGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCT...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGTGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQCGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATCTTCGACCTCCAGTCTaGCCGCTTCAGCGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDLRPPV*PLQRWE
Trigger: CTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAG...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTASVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAACAAATCTCCAGAGTTTaGCATGTTAAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQQISRV*HVKRTG
Trigger: TCCAGTTCTTTTAACATGTCAAACTCTGGAGATTTG...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000540236.3
CDS-3UTR TCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACGTGACTGCACGCTCATaGACAAATCTCCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDVTARS*TNLQSL
Trigger: CAAACTCTGGAGATTTGTTCATGAGCGTGCAGTCAC...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGGGGAAAGTGAAGATGTaGGATGGTACATGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLGKVKM*DGTCAY
Trigger: GTAGGCACATGTACCATCTCACATCTTCACTTTCCC...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTCCCAAGCAGTCAATGTaGCAGGGACCAAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLPKQSM*QGPSMY
Trigger: GTACATACTTGGTCCCTGTCACATTGACTGCTTGGG...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGATCTAGGCATCTGTTCTaGTTAGGGCTGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGSRHLF*LGLKLV
Trigger: TACTAACTTCAGCCCTAATCAGAACAGATGCCTAGA...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACCGGCTCTTCCTCTTCTaGTCCTCGGCTCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHRLFLF*SSARLL
Trigger: CAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCG...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGRISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCAGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAATCCTTTTGCAAATATaGATTGATCGGGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQILLQI*IDREKG
Trigger: TCCTTTCTCCCGATCAATGCATATTTGCAAAAGGAT...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTGTATCCACCTGTGATTaGACGTTGGCTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSVSTCD*TLAPTW
Trigger: CCAGGTTGGAGCCAACGTGCAATCACAGGTGGATAC...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR GCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGATGGGGCTCCCTGAGTaGTCCAGAGGTGGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGMGLPE*SRGGGN
Trigger: GTTCCCACCACCTCTGGAGCACTCAGGGAGCCCCAT...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCACATATTGGGTTCAAGTaGAAACTAAGGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASHIGFK*KLREPG
Trigger: CCCTGGTTCCCTTAGTTTGCACTTGAACCCAATATG...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTCATGTTCTTGCTAGCTaGCCATTCTCACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVIHVLAS*PFSPLR
Trigger: CCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTTTCAGTGGCATCCCCTaGTCCCCTGAGCACACACAG +
Preference number: 4 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSFSGIP*SPEHTQ
Trigger: CTGTGTGTGCTCAGGGGAGCAGGGGATGCCACTGAA...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGTTTCCAAACCCATCCTaGTGCTCTCAGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLFPNPS*CSQCSP
Trigger: AGGAGAACACTGAGAGCAGCAGGATGGGTTTGGAAA...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAGGGAATGCATCAGCCTaGGCTGCTCGTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAGNASA*AARPSP
Trigger: TGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCC...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATTAAAGCATGTTTTCTaGCCTGCGCCTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASLKHVF*PAPHPN
Trigger: GTTTGGATGAGGCGCAGGCCAGAAAACATGCTTTAA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR CCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTTCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLLYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAGGGGATAAGGGCTGGTaGGGAAGGGTGTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAGDKGW*GRVLTP
Trigger: TGGAGTCAACACCCTTCCCCACCAGCCCTTATCCCC...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420696.7
3UTR CAA 72 bp TTTATGACTGTAGTGCCAAGCAGAATTTCCATGTTCTaGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: FMTVVPSRISMF*LAAHSHPSGSH
Trigger: ATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATGGAAATTCTGCTTGGCACTACAGTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTATTTCCAAACCAGTTTaGTACCTGGGAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAISKPV*YLGDCD
Trigger: ATCACAGTCTCCCAGGTATCAAACTGGTTTGGAAAT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADACGLYI*LAASPS
Trigger: TGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCA...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATCAGGGAGGCCTGGAATaGATAGGGCAATGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYQGGLE*IGQCGV
Trigger: TACTCCACATTGCCCTATTCATTCCAGGCCTCCCTG...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTGGGAAAGTGAAGATGTaGGATGGTACATGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLGKVKM*DGTCAY
Trigger: GTAGGCACATGTACCATCTCACATCTTCACTTTCCC...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACCAGTCCGGTCTCCTTTaGAAGGCAGAAATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNQSGLL*KAEMGS
Trigger: GGAGCCCATTTCTGCCTTGCAAAGGAGACCGGACTG...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR GCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATGGCCTGGTCCGGCTTTaGTCTCGCAGGAGATTCATC +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDGLVRL*SRRRFI
Trigger: GATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCC...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGACTCTCTTTCGTACTTTaGCCTAAGTCAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: LLCLLIASTSSLTASALGLSFVL*PKSSKC
Trigger: ACATTTGCTTGACTTAGGGCAAAGTACGAAAGAGAG...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGACTTGGCAAATGTACTaGACGGGCGTCAATTCCATG +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVTWQMY*TGVNSM
Trigger: CATGGAATTGACGCCCGTGCAGTACATTTGCCAAGT...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTATATCTTCCCACTCTTTaGCTTCTCCCCACCCAAAAC +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVYLPTL*LLPTQN
Trigger: GTTTTGGGTGGGGAGAAGGCAAAGAGTGGGAAGATA...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS-3UTR CCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHIPTPA*ECISLG
Trigger: GCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGAT...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTAGGAGATTCATCACGTaGGTGGTGAACTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGRRFIT*VVNSLQ
Trigger: CTGCAACGAGTTCACCACCCACGTGATGAATCTCCT...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATTGGGGAGATGGGCCTaGTCCGGCTTTGCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTLGRWA*SGFALA
Trigger: TGCGAGAGCAAAGCCGGACCAGGCCCATCTCCCCAA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTAAACCAGTTTGATACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVNQFDT*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTATCAAACTGGTT...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCATTAGCTTGGCTTCCATaGGCTGACACATTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPLAWLP*ADTLVA
Trigger: TGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAA...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAAGTGAAGATGTGAGATaGTACATGTGCCTACATGTG +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASSEDVR*YMCLHV
Trigger: CACATGTAGGCACATGTACCATCTCACATCTTCACT...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCATATTCAGGCCACATCTaGAGTCACTCTTCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASYSGHI*SHSSCF
Trigger: GAAACAAGAAGAGTGACTCCAGATGTGGCCTGAATA...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTSSRGW*TRCRPA
Trigger: AGCAGGCCTGCAACGAGTTCACCACCCACGTGATGA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCTGTCGCTTGCTTGTTaGAATTCCGTCTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTLSLAC*NSVSSA
Trigger: GGCGGAAGAGACGGAATTTCAACAAGCAAGCGACAG...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAAGCCGAGTTGGGAGTTaGGGGCGAGTTAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTSRVGS*GRVSLA
Trigger: AGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTCTTATTGTGTTTGCTaGTTGCTTCGACCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLSYCVC*LLRPPV
Trigger: GACTGGAGGTCGAAGCAATCAGCAAACACAATAAGA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTAGTGAGGGATTCGAGTaGGGTAAATTTGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSSEGFE*GKFGSS
Trigger: TGAGGAGCCAAATTTACCTCACTCGAATCCCTCACT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCATATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGTCTAGGCATCTGTTCTaGTTAGGGCTGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLSRHLF*LGLKLV
Trigger: TACTAACTTCAGCCCTAATCAGAACAGATGCCTAGA...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTATAATTGCTCCTCTTTaGTGTTCTTCAACCACCATG +
Preference number: 4 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAIIAPL*CSSTTM
Trigger: CATGGTGGTTGAAGAACATCAAAGAGGAGCAATTAT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS-3UTR TCA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGAACTGCCCTAATGACTaGAATAATTGCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWNCPND*NNCSSL
Trigger: CAAAGAGGAGCAATTATTTCAGTCATTAGGGCAGTT...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS-3UTR GCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLRISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCAATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCATCCCCATTGAGTGACTaGACGCTCATGAACAAATCT +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPSPLSD*TLMNKS
Trigger: AGATTTGTTCATGAGCGTGCAGTCACTCAATGGGGA...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR GCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATTGCCATTCTGGTAAGTaGACGCTAGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDCHSGK*TLVGLQ
Trigger: CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCA...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATTCAGTGGCATCCCCTaGTCCCCTGAGCACACACAG +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTFSGIP*SPEHTQ
Trigger: CTGTGTGTGCTCAGGGGAGCAGGGGATGCCACTGAA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp CAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAAATCGGCGCTTAAATCTGTaGCTTAATCCTTTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QPHLGMGDYTFDNNAPSNRRLNL*LNPFAN
Trigger: ATTTGCAAAAGGATTAAGCCACAGATTTAAGCGCCG...ATTTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACGGGAATGCATCAGCCTaGGCTGCTCGTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHGNASA*AARPSP
Trigger: TGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCC...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTTAAAGCATGTTTTCTaGCCTGCGCCTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLLKHVF*PAPHPN
Trigger: GTTTGGATGAGGCGCAGGCCAGAAAACATGCTTTAA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000559240.5
CDS-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATCTCCTTTGGGGAGATaGGCCTGGTCCGGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTSPLGR*AWSGFA
Trigger: AGCAAAGCCGGACCAGGCCCATCTCCCCAAAGGAGA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATGAGCTGAACTTGCGGTaGATGATGCTGACCATCCGC +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDELNLR*MMLTIR
Trigger: GCGGATGGTCAGCATCATCCACCGCAAGTTCAGCTC...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATTGCCTCTTTAGAGGATaGTGGGAGGATGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDCLFRG*WEDEEG
Trigger: CCCCTCCTCATCCTCCCACCATCCTCTAAAGAGGCA...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CCA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACAGTGAAGATGTGAGATaGTACATGTGCCTACATGTG +
Preference number: 4 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDSEDVR*YMCLHV
Trigger: CACATGTAGGCACATGTACCATCTCACATCTTCACT...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RRLLLCLLIASTSSLTASKSSLH*KPGLPH
Trigger: ATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTT...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACCCGCCATGTAGTTGCTaGCCTGCGCCTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHPPCSC*PAPHPN
Trigger: GTTTGGATGAGGCGCAGGCCAGCAACTACATGGCGG...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
3UTR CAA 72 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTaGCTGATGCATTCATCACCATGCCTAACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYS*LMHSSPCLTQA
Trigger: GGCCTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATTATGACAGTCCCCAGTaGATAGCTGGGGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDYDSPQ*IAGARK
Trigger: CTTCCTAGCCCCAGCTATTCACTGGGGACTGTCATA...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQASLCQ*PSLRVT
Trigger: AGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGC...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTGGACATTACTTCCCCTaGCTTCGCATTTACAGATTG +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVIGHYFP*LRIYRL
Trigger: CAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCC...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCACCCAAGCAGTCAATGTaGCAGGGACCAAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAPKQSM*QGPSMY
Trigger: GTACATACTTGGTCCCTGTCACATTGACTGCTTGGG...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTAAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVRISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTGTACATCTGACTGGCTaGGAGTCCATCACTGTATCC +
Preference number: 4 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSVHLTG*ESITVS
Trigger: GGATACAGTGATGGACTCGCAGCCAGTCAGATGTAC...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGGTATCCACCTGTGATTaGACGTTGGCTCCAACCTGG +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGVSTCD*TLAPTW
Trigger: CCAGGTTGGAGCCAACGTGCAATCACAGGTGGATAC...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR GCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVIMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CAAATATGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACCAAATCCTTCCCACTTaGCGAAAAGAAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QICTQPHLGMGDYTFDNNQILPT*RKEIRA
Trigger: AGCTCTGATTTCTTTTCGCCAAGTGGGAAGGATTTG...GTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACATATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCAGACTGTACATCTGACTaGCTGCGAGTCCATCACTGT +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSDCTSD*LRVHHC
Trigger: ACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTC...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCAATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATTTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYLLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCAGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNASLCQ*PSLRVT
Trigger: AGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGC...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTTCTAGGCATCTGTTCTaGTTAGGGCTGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVISRHLF*LGLKLV
Trigger: TACTAACTTCAGCCCTAATCAGAACAGATGCCTAGA...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGGTCTCTTGGAGCCAATaGCATTTTATCATCTCTACA +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVVSWSQ*HFIIST
Trigger: TGTAGAGATGATAAAATGTCATTGGCTCCAAGAGAC...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS-3UTR GCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGATTGTGTTTGCTGATTaGTTCGACCTCCAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQIVFAD*FDLQSD
Trigger: GTCAGACTGGAGGTCGAAGCAATCAGCAAACACAAT...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTATCAGGTCCTGTGTATaGCATTCTGGTAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTIRSCV*HSGKCT
Trigger: CGTGCACTTACCAGAATGGCATACACAGGACCTGAT...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCATTTCCAAACCCATCCTaGTGCTCTCAGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSFPNPS*CSQCSP
Trigger: AGGAGAACACTGAGAGCAGCAGGATGGGTTTGGAAA...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACAACCAGTTTGATACCTaGGAGACTGTGATGCCACAC +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNNQFDT*ETVMPH
Trigger: GTGTGGCATCACAGTCTCCCAGGTATCAAACTGGTT...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCATTAGCTTGGCTTCCATaGGCTGACACATTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSLAWLP*ADTLVA
Trigger: TGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAA...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGCTGTATCCTCCTGTCTaGCTGATAACATGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGLYPPV*LITWRR
Trigger: CCTTCGCCATGTTATCAGCCAGACAGGAGGATACAG...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: LIPSLGLKRHSATVINVGMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAGTGAAGATGTGAGATaGTACATGTGCCTACATGTG +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVISEDVR*YMCLHV
Trigger: CACATGTAGGCACATGTACCATCTCACATCTTCACT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACATTGTAAGTACTGTATaGGGCTCCCTGAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNIVSTV*GSLSAP
Trigger: TGGAGCACTCAGGGAGCCCCATACAGTACTTACAAT...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGAACCATGTTCTTGCGTaGGTAGTTTCATTATATTCC +
Preference number: 4 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLNHVLA*VVSLYS
Trigger: GGAATATAATGAAACTACCCACGCAAGAACATGGTT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTATTCAGGCCACATCTaGAGTCACTCTTCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSYSGHI*SHSSCF
Trigger: GAAACAAGAAGAGTGACTCCAGATGTGGCCTGAATA...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTACAAATCTCCAGAGTTTaGCATGTTAAAAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVQISRV*HVKRTG
Trigger: TCCAGTTCTTTTAACATGTCAAACTCTGGAGATTTG...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR TCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGGAAAATATCCTTCAGTaGTATGAGAGAGGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGENILQ*YERGRG
Trigger: TCCCCGCCCTCTCTCATATCACTGAAGGATATTTTC...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTGCTTTCTCAGTGCTaGATGGTCTCCAAAGACTGT +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADALLSQC*MVSKDC
Trigger: ACAGTCTTTGGAGACCATTCAGCACTGAGAAAGCAA...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGGCTTCTCTGTGTCAGTaGCCTTCACTTAGAGTCACT +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGASLCQ*PSLRVT
Trigger: AGTGACTCTAAGTGAAGGTCACTGACACAGAGAAGC...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTGGACATTACTTCCCCTaGCTTCGCATTTACAGATTG +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTGHYFP*LRIYRL
Trigger: CAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCC...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAGGACATTACTTCCCCTaGCTTCGCATTTACAGATTG +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAGHYFP*LRIYRL
Trigger: CAATCTGTAAATGCGAAGTCAGGGGAAGTAATGTCC...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGAAATACACATTCCCTTaGGTTTCTTCAGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQKYTFP*VSSVAS
Trigger: GGATGCCACTGAAGAAACTCAAGGGAATGTGTATTT...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACATGCATTCATCACCATaGCTAACTCAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNMHSSP*LTQAQF
Trigger: AAACTGGGCCTGAGTTAGGCATGGTGATGAATGCAT...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAAGGAGATTCATCACGTaGGTGGTGAACTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTRRFIT*VVNSLQ
Trigger: CTGCAACGAGTTCACCACCCACGTGATGAATCTCCT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: YMASRESEDVRWYMCLHVFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTATTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTACAAGGCAACATATTaGGTTCAAGTGCAAACTAAG +
Preference number: 4 (lower is better)
Translates to: VSRLAEIASQRREEKETLYKATY*VQVQTK
Trigger: CTTAGTTTGCACTTGAACCCAATATGTTGCCTTGTA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATTTCCTGCCACTAAGATaGAGTTCTCCACTGATTCTA +
Preference number: 4 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYFLPLR*SSPLIL
Trigger: TAGAATCAGTGGAGAACTCCATCTTAGTGGCAGGAA...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACGCCGAGGGCCGCTTTTaGATCAGTTGGCAGTATTTT +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHAEGRF*ISWQYF
Trigger: AAAATACTGCCAACTGATCCAAAAGCGGCCCTCGGC...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR TCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATAGTGTCCAGATTGGCTaGAATAGCATCCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDSVQIG*NSIPKK
Trigger: CTTCTTTGGGATGCTATTTCAGCCAATCTGGACACT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR TCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAGGCATCTCGGGAAAGTaGAGATGTGAGATGGTACAT +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTGISGK*RCEMVH
Trigger: ATGTACCATCTCACATCTTCACTTTCCCGAGATGCC...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCAAAATACACATTCCCTTaGGTTTCTTCAGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSKYTFP*VSSVAS
Trigger: GGATGCCACTGAAGAAACTCAAGGGAATGTGTATTT...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: IVEVEGFHDKNFLFLADARISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATCATATTGGGTTCAAGTaGAAACTAAGGGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDHIGFK*KLREPG
Trigger: CCCTGGTTCCCTTAGTTTGCACTTGAACCCAATATG...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAACTTGGCAAATGTACTaGACGGGCGTCAATTCCATG +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTTWQMY*TGVNSM
Trigger: CATGGAATTGACGCCCGTGCAGTACATTTGCCAAGT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTATGAATAGGGCAATGTaGAGTATTCCTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTMNRAM*SIPAKR
Trigger: CCTCTTAGCAGGAATACTCCACATTGCCCTATTCAT...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCAAGTGAAGATGTGAGATaGTACATGTGCCTACATGTG +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSSEDVR*YMCLHV
Trigger: CACATGTAGGCACATGTACCATCTCACATCTTCACT...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTTTCCTGCCACTAAGATaGAGTTCTCCACTGATTCTA +
Preference number: 4 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTFLPLR*SSPLIL
Trigger: TAGAATCAGTGGAGAACTCCATCTTAGTGGCAGGAA...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTTTCCTGCCACTAAGATaGAGTTCTCCACTGATTCTA +
Preference number: 4 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSFLPLR*SSPLIL
Trigger: TAGAATCAGTGGAGAACTCCATCTTAGTGGCAGGAA...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAACCATGTTCTTGCGTaGGTAGTTTCATTATATTCC +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVINHVLA*VVSLYS
Trigger: GGAATATAATGAAACTACCCACGCAAGAACATGGTT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR TCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATATTTCCAAACCAGTTTaGTACCTGGGAGACTGTGAT +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDISKPV*YLGDCD
Trigger: ATCACAGTCTCCCAGGTATCAAACTGGTTTGGAAAT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATAGGATTTCTGTCGCTTaGTTGTTGAAATTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDRISVA*LLKFRL
Trigger: GAGACGGAATTTCAACAAGCAAGCGACAGAAATCCT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTATTCAACCATGTTCTTaGGTGGGTAGTTTCATTATA +
Preference number: 4 (lower is better)
Translates to: ITFPFPMILRSSNEASKSIQPCS*VGSFII
Trigger: TATAATGAAACTACCCACGCAAGAACATGGTTGAAT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TTAGAGTCACTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTATTCAACCATGTTCTTaGGTGGGTAGTTTCATTATA +
Preference number: 4 (lower is better)
Translates to: LESLIPSLGLKRHSATVIIQPCS*VGSFII
Trigger: TATAATGAAACTACCCACGCAAGAACATGGTTGAAT...AATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAGTGACTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACGCAGTATTTTCGGCATaGCTGTGTGTTTGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHAVFSA*LCVCVD
Trigger: ATCCACACAAACACACAGGCATGCCGAAAATACTGC...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR GCA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGCTCTCTTTCGTACTTTaGCCTAAGTCAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: KRHSATVINVGNCIWHLGLSFVL*PKSSKC
Trigger: ACATTTGCTTGACTTAGGGCAAAGTACGAAAGAGAG...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATAAGAGTAGTTTACACTaGAAACCTGGTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDKSSLH*KPGLPH
Trigger: ATGAGGAAGACCAGGTTTCCAGTGTAAACTACTCTT...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CCA 90 bp AGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCATTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: RLKGFTIRTFYSLLMHSSFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...TGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
3UTR CAA 72 bp GATATTAACCAGAAGTTACAACAAGAAAACCATTTATaGTCCCTAGATGGCATGAACCCGTTTATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DINQKLQQENHL*SLDGMNPFISG
Trigger: CCCTGAAATAAACGGGTTCATGCCATCTAGGGACAATAAATGGTTTTCTTGTTGTAACTTCTGGTTAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR GCA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACATTCAACCATGTTCTTaGGTGGGTAGTTTCATTATA +
Preference number: 4 (lower is better)
Translates to: FHDKNFLFLADAFITMPNIQPCS*VGSFII
Trigger: TATAATGAAACTACCCACGCAAGAACATGGTTGAAT...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CCA 90 bp TCTCATGTATTTTTAGTACACGCTGTGTTCCCAGGGAATAAAAATCACTGTGATTTTATTGTCCCTAGATaGCATGAACCCGTTTATTTC +
Preference number: 4 (lower is better)
Translates to: SHVFLVHAVFPGNKNHCDFIVPR*HEPVYF
Trigger: GAAATAAACGGGTTCATGCCATCTAGGGACAATAAA...ATCACAGTGATTTTTATTCCCTGGGAACACAGCGTGTACTAAAAATACATGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR GCA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACATCCTTTTGCAAATATaGATTGATCGGGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHILLQI*IDREKG
Trigger: TCCTTTCTCCCGATCAATGCATATTTGCAAAAGGAT...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CCA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACATACAAGGCAACATATTaGGTTCAAGTGCAAACTAAG +
Preference number: 4 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTYKATY*VQVQTK
Trigger: CTTAGTTTGCACTTGAACCCAATATGTTGCCTTGTA...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS GCA 90 bp TGGGACAGGCCGGGGTGTCCGGCCATCCCGACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCGTCCATCTCCAAAGGCTACGGCAGC +
Preference number: 5 (lower is better)
Translates to: WDRPGCPAIPTPAWE*ISLGCSSISKGYGS
Trigger: GCTGCCGTAGCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS GCA 90 bp TGTCCGGCCATCCCGACCCCAGCATGGGAATGCATCAGCCTGGGCTaGTCGTCCATCTCCAAAGGCTACGGCAGCCCCCGGCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CPAIPTPAWECISLG*SSISKGYGSPRLFL
Trigger: GAGGAAGAGCCGGGGGCTGCCGTAGCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS CCA 90 bp AAGTGCTGGGACAGGCCGGGGTGTCCGGCCATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGCTGCTCGTCCATCTCCAAAGGCTAC +
Preference number: 5 (lower is better)
Translates to: KCWDRPGCPAIPTPA*ECISLGCSSISKGY
Trigger: GTAGCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTCCCAGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS TCA 90 bp AAACCACCACCACCGAGGTCTGCACAGCACCGGCACTTTGCATATTaGAAACGCGGCTCCAGCGGGCCCCACGGAACAGATCCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KPPPPRSAQHRHFAY*KRGSSGPHGTDPSQ
Trigger: CTGGGAAGGATCTGTTCCGTGGGGCCCGCTGGAGCCGCGTTTTCAATATGCAAAGTGCCGGTGCTGTGCAGACCTCGGTGGTGGTGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS GCA 90 bp TCGTCCATCTCCAAAGGCTACGGCAGCCCCCGGCTCTTCCTCTTCTaGTCCTCGGCTCGGCTCCTGGGAAGCACCAAGGCTTTTTATCCT +
Preference number: 5 (lower is better)
Translates to: SSISKGYGSPRLFLF*SSARLLGSTKAFYP
Trigger: AGGATAAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGGGGCTGCCGTAGCCTTTGGAGATGGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
CDS CCA 90 bp GGGGGAGGGCAGCTGAGAAAGCATGTCCGAAGCAGGAAAATGGCCTaGTGGCTTTACTGGCCCAGACTAGGTCACTGGATGGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GGGQLRKHVRSRKMA*WLYWPRLGHWMASR
Trigger: CCTGGAGGCCATCCAGTGACCTAGTCTGGGCCAGTAAAGCCACCAGGCCATTTTCCTGCTTCGGACATGCTTTCTCAGCTGCCCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTCCGCTAACAGCATGTaGTCCAGCCGCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLSANSM*SSRISW
Trigger: CCAGCTGATGCGGCTGGACAACATGCTGTTAGCGGA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: LPILTPQGLILLPGSLPSGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp CTGGGGCACAGGGTCAGCCGGGATGCGATTGCTGGGAGATCAGTTGGAGGTATCTCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGHRVSRDAIAGRSVGGISAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...GATACCTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGACCCTGTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS CCA 90 bp GGAGGGCAGCTGAGAAAGCATGTCCGAAGCAGGAAAATGGCCTGGTaGCTTTACTGGCCCAGACTAGGTCACTGGATGGCCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GGQLRKHVRSRKMAW*LYWPRLGHWMASRS
Trigger: GGACCTGGAGGCCATCCAGTGACCTAGTCTGGGCCAGTAAAGCCACCAGGCCATTTTCCTGCTTCGGACATGCTTTCTCAGCTGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: IASTSSLTASALGEKPSLGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGCCATGGGCTGACACATaGGTAGCAGTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLPWADT*VAVTAV
Trigger: AACAGCTGTCACTGCTACCAATGTGTCAGCCCATGG...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: IASTSSLTASALGEKPSLSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS TCA 90 bp GCTGCCTTTGGTGGCAACCAAGGCCTCTGTCCCGAGTCACAGAGATaGAACCCCGTGGAACTAGGGCACGGGAAGATGAGTCATTTCAGC +
Preference number: 5 (lower is better)
Translates to: AAFGGNQGLCPESQR*NPVELGHGKMSHFS
Trigger: GCTGAAATGACTCATCTTCCCGTGCCCTAGTTCCACGGGGTTTCATCTCTGTGACTCGGGACAGAGGCCTTGGTTGCCACCAAAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 90 bp CCTTCCGTCGGCACAAGTTGTTTCCCAGGGACGAACTCTGATCCATaGCGGGACTCTGCAATGGCAGCAGCCACAGGTTTTATGTCCCCG +
Preference number: 5 (lower is better)
Translates to: PSVGTSCFPGTNSDP*RDSAMAAATGFMSP
Trigger: CGGGGACATAAAACCTGTGGCTGCTGCCATTGCAGAGTCCCGTCATGGATCAGAGTTCGTCCCTGGGAAACAACTTGTGCCGACGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CCA 90 bp ACGGCAGCCCCCGGCTCTTCCTCTTCTGCTCCTCGGCTCGGCTCCTaGGAAGCACCAAGGCTTTTTATCCTTCAAGCTTGTCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: TAAPGSSSSAPRLGS*EAPRLFILQACLQI
Trigger: GATTTGAAGACAAGCTTGAAGGATAAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGGGGCTGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
CDS-3UTR CAA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: TSISTDALRTVHLTGCESECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLSVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCTATCCACCAGCCGAGTaGGGAGTTGAGGGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: TSISTDALRTVHLTGCESYPPAE*GVEGEL
Trigger: TAACTCGCCCTCAACTCCCAACTCGGCTGGTGGATA...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCAAAGGGGGTGGGCTGTaGCAAAAGCCAGATCTCCCC +
Preference number: 5 (lower is better)
Translates to: IRSCVCHSGKCTLVGLQVKGGGL*QKPDLP
Trigger: GGGGAGATCTGGCTTTTGCAACAGCCCACCCCCTTT...GACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAGGAAGGCAGGGGGATaGCAATGCAAACTTTCCCCC +
Preference number: 5 (lower is better)
Translates to: IASTSSLTASALGEKPSLRKAGG*QCKLSP
Trigger: GGGGGAAAGTTTGCATTGCAATCCCCCTGCCTTCCT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS GCA 90 bp CAAAACCACGTGCTCACACGCGGCCTTCTGAATTTCACTTCTGCATaGAAAACCACCACCACCGAGGTCTGCACAGCACCGGCACTTTGC +
Preference number: 5 (lower is better)
Translates to: QNHVLTRGLLNFTSA*KTTTTEVCTAPALC
Trigger: GCAAAGTGCCGGTGCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAGGCCGCGTGTGAGCACGTGGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 90 bp GTTGTTTCCCAGGGACGAACTCTGATCCATGACGGGACTCTGCAATaGCAGCAGCCACAGGTTTTATGTCCCCGAGCACAGTGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: VVSQGRTLIHDGTLQ*QQPQVLCPRAQWPD
Trigger: ATCAGGCCACTGTGCTCGGGGACATAAAACCTGTGGCTGCTGCCATTGCAGAGTCCCGTCATGGATCAGAGTTCGTCCCTGGGAAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS-3UTR CAA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGCCATGGGCTGACACATaGGTAGCAGTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLPWADT*VAVTAV
Trigger: AACAGCTGTCACTGCTACCAATGTGTCAGCCCATGG...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCCCATGGGCTGACACATaGGTAGCAGTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: TSISTDALRTVHLTGCESPWADT*VAVTAV
Trigger: AACAGCTGTCACTGCTACCAATGTGTCAGCCCATGG...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAATCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp GCTGCTCTGCCCTTGCAAGGATCCCATCTGCAAGGAAGGGAGGTATaGGGGGAGCAAAGGAAGAACTCCTTCCGTCGGCACAAGTTGTTT +
Preference number: 5 (lower is better)
Translates to: AALPLQGSHLQGREV*GEQRKNSFRRHKLF
Trigger: AAACAACTTGTGCCGACGGAAGGAGTTCTTCCTTTGCTCCCCTCATACCTCCCTTCCTTGCAGATGGGATCCTTGCAAGGGCAGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 90 bp TACTCAAAACCACGTGCTCACACGCGGCCTTCTGAATTTCACTTCTaGATGCAAAACCACCACCACCGAGGTCTGCACAGCACCGGCACT +
Preference number: 5 (lower is better)
Translates to: YSKPRAHTRPSEFHF*MQNHHHRGLHSTGT
Trigger: AGTGCCGGTGCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAGGCCGCGTGTGAGCACGTGGTTTTGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 90 bp GAAGGGTATCCACCAGCCGAGTTGGGAGTTGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACATTGGTAGCAGTGACAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: EGYPPAELGVEGELA*LPWADTLVAVTAVL
Trigger: CAAAACAGCTGTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCTGGTGGATACCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCAGTCAAGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ILTPQGLILLPGSLPSSQECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...TTGACTGCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGAACCAGCCGAGTaGGGAGTTGAGGGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLEEPAE*GVEGEL
Trigger: TAACTCGCCCTCAACTCCCAACTCGGCTGGTTCTTC...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420696.7
ENST00000540236.3
CDS GCA 90 bp ACTTCACTCGGCACTTCTTCCTGCTGCCTTATGAAGAAGCTGCCTTaGTTCCCCTTCACCTTCTGCCATGACTGCAAGTTTCCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TSLGTSSCCLMKKLP*FPFTFCHDCKFPEA
Trigger: GGCCTCAGGAAACTTGCAGTCATGGCAGAAGGTGAAGGGGAAGCAAGGCAGCTTCTTCATAAGGCAGCAGGAAGAAGTGCCGAGTGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp CTTCTGAATTTCACTTCTGCATGCAAAACCACCACCACCGAGGTCTaGACAGCACCGGCACTTTGCATATTGAAAACGCGGCTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LLNFTSACKTTTTEV*TAPALCILKTRLQR
Trigger: CCGCTGGAGCCGCGTTTTCAATATGCAAAGTGCCGGTGCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 90 bp GAACTGGAAGAACCAGCCGAGTTGGGAGTTGAGGGCGAGTTAGCTTaGCTTCCATGGGCTGACACATTGGTAGCAGTGACAGCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ELEEPAELGVEGELA*LPWADTLVAVTAVL
Trigger: CAAAACAGCTGTCACTGCTACCAATGTGTCAGCCCATGGAAGCCAAGCTAACTCGCCCTCAACTCCCAACTCGGCTGGTTCTTCCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000420696.7
ENST00000468104.5
ENST00000496120.6
ENST00000540236.3
ENST00000560469.5
ENST00000560641.5
ENST00000627490.2
CDS-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: RRLLLCLLIASTSSLTASGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCTCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFSVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTGATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ASTSSLTASALGEKPSLLISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...CAGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTCAGGATTTCTGTCGCTaGCTTGTTGAAATTCCGTCT +
Preference number: 5 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPQDFCR*LVEIPS
Trigger: AGACGGAATTTCAACAAGCAAGCGACAGAAATCCTG...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 5 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGGAAGCCTCCCAAGCGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 5 (lower is better)
Translates to: LPILTPQGLILLPGSLPSEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...GCTTGGGAGGCTTCCAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp AAGAACTCCTTCCGTCGGCACAAGTTGTTTCCCAGGGACGAACTCTaGTCCATGACGGGACTCTGCAATGGCAGCAGCCACAGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: KNSFRRHKLFPRDEL*SMTGLCNGSSHRFY
Trigger: ATAAAACCTGTGGCTGCTGCCATTGCAGAGTCCCGTCATGGATCAGAGTTCGTCCCTGGGAAACAACTTGTGCCGACGGAAGGAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CCA 90 bp AGGGTTGGCCAGGGGACCACAAGATGGAGGCTATGGGCTGGTCACTaGTACTTCTGCCACCATGATAGAGCACATAAACTATTCAACTGG +
Preference number: 5 (lower is better)
Translates to: RVGQGTTRWRLWAGH*YFCHHDRAHKLFNW
Trigger: CCAGTTGAATAGTTTATGTGCTCTATCATGGTGGCAGAAGTACCAGTGACCAGCCCATAGCCTCCATCTTGTGGTCCCCTGGCCAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp TGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAGTCCGGTCTCCTTaGCAAGGCAGAAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: CTQPHLGMGDYTFDNNAPSVRSP*QGRNGL
Trigger: GAGCCCATTTCTGCCTTGCAAAGGAGACCGGACTGA...AGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAATCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: VFADCFDLQSDRFSVGRESVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCTATCCACCAGCCGAGTaGGGAGTTGAGGGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: ETLIVFADCFDLQSDRFSYPPAE*GVEGEL
Trigger: TAACTCGCCCTCAACTCCCAACTCGGCTGGTGGATA...GCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367897.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTASAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAAGAACCAGCCGAGTaGGGAGTTGAGGGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: LLCLLIASTSSLTASALGEEPAE*GVEGEL
Trigger: TAACTCGCCCTCAACTCCCAACTCGGCTGGTTCTTC...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR CAA 90 bp AGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGGTCCTGAGAATTTCCATGTTCTaGCTAGCTGCCCATTCTCAC +
Preference number: 5 (lower is better)
Translates to: RSCVCHSGKCTLVGLQVLRISMF*LAAHSH
Trigger: GTGAGAATGGGCAGCTAGCAAGAACATGGAAATTCT...CAGGACCTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS GCA 90 bp TTCCCCCAATGGCCAAGGACAACACTAAAATCAGTATCACAAGTCTaGTGTGGCACATGGCCATGGAATGTGACCGTCAGAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: FPQWPRTTLKSVSQV*CGTWPWNVTVRGSS
Trigger: TGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGTTGTCCTTGGCCATTGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 90 bp CCAATGGCCAAGGACAACACTAAAATCAGTATCACAAGTCTGCTGTaGCACATGGCCATGGAATGTGACCGTCAGAGGCAGCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PMAKDNTKISITSLL*HMAMECDRQRQLRE
Trigger: CTCTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGTTGTCCTTGGCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IASTSSLTASALGEKPSLISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCAGGATTTCTGTCGCTaGCTTGTTGAAATTCCGTCT +
Preference number: 5 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLQDFCR*LVEIPS
Trigger: AGACGGAATTTCAACAAGCAAGCGACAGAAATCCTG...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTCAAATAGGAAGGCAGGGGGATaGCAATGCAAACTTTCCCCC +
Preference number: 5 (lower is better)
Translates to: QPHLGMGDYTFDNNAPSNRKAGG*QCKLSP
Trigger: GGGGGAAAGTTTGCATTGCAATCCCCCTGCCTTCCT...ATTTGAAGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTTTTTGCAAATATGCATaGATCGGGAGAAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPFCKYA*IGRKER
Trigger: CCTCTCCTTTCTCCCGATCAATGCATATTTGCAAAA...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp ATGATCAGGTCCTGTGTATGCCATTCTGGTAAGTGCACGCTAGTGGGCCTGCAGTGGTGGGGAAGGGTGTaGACTCCAAAAAGCAAGAAA +
Preference number: 5 (lower is better)
Translates to: MIRSCVCHSGKCTLVGLQWWGRV*TPKSKK
Trigger: TTTCTTGCTTTTTGGAGTCAACACCCTTCCCCACCA...CTGCAGGCCCACTAGCGTGCACTTACCAGAATGGCATACACAGGACCTGATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGAAGAACCAGCCGAGTaGGGAGTTGAGGGCGAGTTA +
Preference number: 5 (lower is better)
Translates to: RRLLLCLLIASTSSLTASEEPAE*GVEGEL
Trigger: TAACTCGCCCTCAACTCCCAACTCGGCTGGTTCTTC...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
CDS-3UTR CAA 90 bp TGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCCTCAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: CFDLQSDRFSVGRETLPPQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...AGGAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAAATACACATTCCCTaGAGTTTCTTCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPQIHIP*SFFSGI
Trigger: GATGCCACTGAAGAAACTCAAGGGAATGTGTATTTG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp TGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTGCCGAGGGCCGCTTTaGGATCAGTTGGCAGTATTT +
Preference number: 5 (lower is better)
Translates to: CTQPHLGMGDYTFDNNAPCRGPL*DQLAVF
Trigger: AAATACTGCCAACTGATCCAAAAGCGGCCCTCGGCA...AGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS TCA 90 bp TCTGTGCCGAACAGAACTTTGTATCCTAGTCACCAAAAAGAACAATaGGGGGCAGTTCCGACTCCTGGCCTCCTTCAATTCAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SVPNRTLYPSHQKEQ*GAVPTPGLLQFRLS
Trigger: GGACAGCCTGAATTGAAGGAGGCCAGGAGTCGGAACTGCCCCTCATTGTTCTTTTTGGTGACTAGGATACAAAGTTCTGTTCGGCACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468104.5
CDS CCA 90 bp CCAAGGACAACACTAAAATCAGTATCACAAGTCTGCTGTGGCACATaGCCATGGAATGTGACCGTCAGAGGCAGCTCAGAGAGGACACAA +
Preference number: 5 (lower is better)
Translates to: PRTTLKSVSQVCCGT*PWNVTVRGSSERTQ
Trigger: TTGTGTCCTCTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGTTGTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTCCGCTAACAGCATGTaGTCCAGCCGCATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSANSM*SSRISW
Trigger: CCAGCTGATGCGGCTGGACAACATGCTGTTAGCGGA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTGGGCCTGGTCCGGCTTaGCTCTCGCAGGAGATTCAT +
Preference number: 5 (lower is better)
Translates to: ITFPFPMILRSSNEASKSGPGPA*LSQEIH
Trigger: ATGAATCTCCTGCGAGAGCAAAGCCGGACCAGGCCC...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCACCATGGGCTGACACATaGGTAGCAGTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: RRLLLCLLIASTSSLTASPWADT*VAVTAV
Trigger: AACAGCTGTCACTGCTACCAATGTGTCAGCCCATGG...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: VSRLAEIASQRREEKETLSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACTTCAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 5 (lower is better)
Translates to: TVGILHLLFPCPSLLPDFKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...GAAGTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 5 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 5 (lower is better)
Translates to: VFADCFDLQSDRFSVGREEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...TTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTCCGCTTTTGGATCAGTaGGCAGTATTTTCGGCATGC +
Preference number: 5 (lower is better)
Translates to: CTQPHLGMGDYTFDNNAPPLLDQ*AVFSAC
Trigger: GCATGCCGAAAATACTGCCAACTGATCCAAAAGCGG...AGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS CCA 90 bp ACAACACTAAAATCAGTATCACAAGTCTGCTGTGGCACATGGCCATaGAATGTGACCGTCAGAGGCAGCTCAGAGAGGACACAACTGGAA +
Preference number: 5 (lower is better)
Translates to: TTLKSVSQVCCGTWP*NVTVRGSSERTQLE
Trigger: TTCCAGTTGTGTCCTCTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTASVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTCTTACCTATGTTCTTCTaGTACCGGATTCGCTTATTT +
Preference number: 5 (lower is better)
Translates to: IASTSSLTASALGEKPSLLPMFF*YRIRLF
Trigger: AAATAAGCGAATCCGGTACAAGAAGAACATAGGTAA...GAGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTASSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AAGACTGTAGGAATTCTCCACCTGCTGTTCCCGTGTCCTTCCCTGCTGCCTGACAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 5 (lower is better)
Translates to: KTVGILHLLFPCPSLLPDRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...GTCAGGCAGCAGGGAAGGACACGGGAACAGCAGGTGGAGAATTCCTACAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 5 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTGCGAGTCCCTAATCACTATGAAGTaGTCACAAAAATGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSISTDALRTVHLTGCESLITMK*SQKCSF
Trigger: GAAGGAGCATTTTTGTGACAACTTCATAGTGATTAG...GGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612123.3
CDS-3UTR CAA 90 bp GATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAGAGAAACCCTCCCTAAACAGAGCAGAGCTTaGCAGGTTTATATTCTGAAT +
Preference number: 5 (lower is better)
Translates to: DCFDLQSDRFSVGRETLPKQSRA*QVYILN
Trigger: ATTCAGAATATAAACCTGCAAAGCTCTGCTCTGTTT...AGGGAGGGTTTCTCTCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp GCCACTAACACCACAATGAAGCAGACGGAAGTCCACAAAAACATCTaGACTACAAGGGGAGGACATGTTCTCTACCCAGCACTGCAAGTT +
Preference number: 5 (lower is better)
Translates to: ATNTTMKQTEVHKNI*TTRGGHVLYPALQV
Trigger: AACTTGCAGTGCTGGGTAGAGAACATGTCCTCCCCTTGTAGTTCAGATGTTTTTGTGGACTTCCGTCTGCTTCATTGTGGTGTTAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp GAAAATAAGCAGAATGAAAGAAAAGGGCCTGACAACTCTAAGAGCTaGTCTGCCCTTGCAAGGATCCCATCTGCAAGGAAGGGAGGTATG +
Preference number: 5 (lower is better)
Translates to: ENKQNERKGPDNSKS*SALARIPSARKGGM
Trigger: CATACCTCCCTTCCTTGCAGATGGGATCCTTGCAAGGGCAGAGCAGCTCTTAGAGTTGTCAGGCCCTTTTCTTTCATTCTGCTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CCA 90 bp TGGATAACCTCCTGGGAAGCACACGATCCACTGACAAATAGTGAATaGGCTCTCTTGGAGGTGCTGTGGCATTCTCAAAGAACTGAAACA +
Preference number: 5 (lower is better)
Translates to: WITSWEAHDPLTNSE*ALLEVLWHSQRTET
Trigger: TGTTTCAGTTCTTTGAGAATGCCACAGCACCTCCAAGAGAGCCCATTCACTATTTGTCAGTGGATCGTGTGCTTCCCAGGAGGTTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: LIPSLGLKRHSATVINVGWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACTCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDSVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 5 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGAAGAATTTCCATGTTCTaGCTAGCTGCCCATTCTCAC +
Preference number: 5 (lower is better)
Translates to: LLCLLIASTSSLTASALGRISMF*LAAHSH
Trigger: GTGAGAATGGGCAGCTAGCAAGAACATGGAAATTCT...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp CCTGCAGGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTAAACAGAGCAGAGCTTaGCAGGTTTATATTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PAGPGSPRHILLLCVSDLKQSRA*QVYILN
Trigger: ATTCAGAATATAAACCTGCAAAGCTCTGCTCTGTTT...AAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACCTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS GCA 90 bp CAGGGGACCACAAGATGGAGGCTATGGGCTGGTCACTGGTACTTCTaGCACCATGATAGAGCACATAAACTATTCAACTGGATTCTAAAT +
Preference number: 5 (lower is better)
Translates to: QGTTRWRLWAGHWYF*HHDRAHKLFNWILN
Trigger: ATTTAGAATCCAGTTGAATAGTTTATGTGCTCTATCATGGTGGCAGAAGTACCAGTGACCAGCCCATAGCCTCCATCTTGTGGTCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp CTGAACTACAAGGGGAGGACATGTTCTCTACCCAGCACTGCAAGTTaGAAAGAATTTATCATGGAATGGATAACCTCCTGGGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: LNYKGRTCSLPSTAS*KEFIMEWITSWEAH
Trigger: GTGTGCTTCCCAGGAGGTTATCCATTCCATGATAAATTCTTTCCAACTTGCAGTGCTGGGTAGAGAACATGTCCTCCCCTTGTAGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGTCAGTCCGGTCTCCTTaGCAAGGCAGAAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQSVRSP*QGRNGL
Trigger: GAGCCCATTTCTGCCTTGCAAAGGAGACCGGACTGA...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTCTGTCGCTTGCTTGTaGAAATTCCGTCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSVACL*KFRLFR
Trigger: GCGGAAGAGACGGAATTTCAACAAGCAAGCGACAGA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTCAGGATTTCTGTCGCTaGCTTGTTGAAATTCCGTCT +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAQDFCR*LVEIPS
Trigger: AGACGGAATTTCAACAAGCAAGCGACAGAAATCCTG...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTCCATGGGCTGACACATaGGTAGCAGTGACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: ITFPFPMILRSSNEASKSPWADT*VAVTAV
Trigger: AACAGCTGTCACTGCTACCAATGTGTCAGCCCATGG...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTTCAGCCGGGATGCGATaGCTGGGAGATCAGTTGGAG +
Preference number: 5 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTSAGMR*LGDQLE
Trigger: CTCCAACTGATCTCCCAGCAATCGCATCCCGGCTGA...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTARLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTTTTGCAAATATGCATaGATCGGGAGAAAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CTQPHLGMGDYTFDNNAPFCKYA*IGRKER
Trigger: CCTCTCCTTTCTCCCGATCAATGCATATTTGCAAAA...AGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGTCGAGTGAGGTAAATTaGGCTCCTCAAACCACCAGC +
Preference number: 5 (lower is better)
Translates to: YMASRESEDVRWYMCLHVSSEVN*APQTTS
Trigger: GCTGGTGGTTTGAGGAGCCAAATTTACCTCACTCGA...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTAAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 5 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GGTCCTGGAAGCCCCAGACACATACTGCTTCTCTGTGTCAGTGACCTTCACTTACAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: GPGSPRHILLLCVSDLHLQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...TAAGTGAAGGTCACTGACACAGAGAAGCAGTATGTGTCTGGGGCTTCCAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp CATGTTCTTGCTAGCTGCCCATTCTCACCCCTCAGGGTCTCATACTTCTCCCTGCTAATCACTATGAAGTaGTCACAAAAATGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HVLASCPFSPLRVSYFSLLITMK*SQKCSF
Trigger: GAAGGAGCATTTTTGTGACAACTTCATAGTGATTAG...CAGGGAGAAGTATGAGACCCTGAGGGGTGAGAATGGGCAGCTAGCAAGAACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp AACTTAGAAATGGGAGAAACCCCCAAAGGGCTACATGATGTCCAATaGCGTGGCATCCATGGAACCATGAAGGCATGGAATGTGTCATTT +
Preference number: 5 (lower is better)
Translates to: NLEMGETPKGLHDVQ*RGIHGTMKAWNVSF
Trigger: AAATGACACATTCCATGCCTTCATGGTTCCATGGATGCCACGTCATTGGACATCATGTAGCCCTTTGGGGGTTTCTCCCATTTCTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp GTTCTGAATTTGGTTTGGGAAGGAAGGCAAGCAGCTCATTTAAACTaGCACCCAGACATTTGGGGCATGTGCAGAACTAAATCTACACTC +
Preference number: 5 (lower is better)
Translates to: VLNLVWEGRQAAHLN*HPDIWGMCRTKSTL
Trigger: GAGTGTAGATTTAGTTCTGCACATGCCCCAAATGTCTGGGTGGCAGTTTAAATGAGCTGCTTGCCTTCCTTCCCAAACCAAATTCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp TATCCAGGACATTCCATGCCCATTTATAGTTTTCTCAGGACTCCTTaGCTCCTAGCTTTCACTCCAAAGCCGTCAACTGTCTCTGTAACT +
Preference number: 5 (lower is better)
Translates to: YPGHSMPIYSFLRTP*LLAFTPKPSTVSVT
Trigger: AGTTACAGAGACAGTTGACGGCTTTGGAGTGAAAGCTAGGAGCCAAGGAGTCCTGAGAAAACTATAAATGGGCATGGAATGTCCTGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTGAATGCTCCACTGAGTaGTCTGAACCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTECSTE*SEPAPP
Trigger: TGGAGGGGCAGGTTCAGACAACTCAGTGGAGCATTC...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTGGGTGGTGAACTCGTaGCAGGCCTGCTCGTATTTC +
Preference number: 5 (lower is better)
Translates to: FHDKNFLFLADAFITMPNWVVNS*QACSYF
Trigger: GAAATACGAGCAGGCCTGCAACGAGTTCACCACCCA...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: RRLLLCLLIASTSSLTASISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TCACATGAGCCACGTTCTTATACAACTCTTTCCTCCAGAGCAATAGGTCAGGACCAGGATTTCTGTCGCTaGCTTGTTGAAATTCCGTCT +
Preference number: 5 (lower is better)
Translates to: SHEPRSYTTLSSRAIGQDQDFCR*LVEIPS
Trigger: AGACGGAATTTCAACAAGCAAGCGACAGAAATCCTG...GTCCTGACCTATTGCTCTGGAGGAAAGAGTTGTATAAGAACGTGGCTCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 5 (lower is better)
Translates to: RRLLLCLLIASTSSLTASKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...TGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTTCAGCGTTGGGATGTGGCTTAATCCTTTaGCAAATATGCATTGATCGG +
Preference number: 5 (lower is better)
Translates to: LLCLLIASTSSLTASALGCGLIL*QICIDR
Trigger: CCGATCAATGCATATTTGCAAAAGGATTAAGCCACA...TCCCAACGCTGAAGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420696.7
CDS-3UTR CAA 90 bp TGTACACAGCCACATCTCGGCATGGGCGATTACACTTTCGATAACAACGCTCCTTGTGGCTTAATCCTTTaGCAAATATGCATTGATCGG +
Preference number: 5 (lower is better)
Translates to: CTQPHLGMGDYTFDNNAPCGLIL*QICIDR
Trigger: CCGATCAATGCATATTTGCAAAAGGATTAAGCCACA...AGGAGCGTTGTTATCGAAAGTGTAATCGCCCATGCCGAGATGTGGCTGTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCATTATCTTCCCACTCTTaGCCTTCTCCCCACCCAAAA +
Preference number: 5 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPLSSHS*PSPHPK
Trigger: TTTTGGGTGGGGAGAAGGCAAAGAGTGGGAAGATAA...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS TCA 90 bp TTAGTATACAAACTTAGAAATGGGAGAAACCCCCAAAGGGCTACATaGTGTCCAATGACGTGGCATCCATGGAACCATGAAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: LVYKLRNGRNPQRAT*CPMTWHPWNHEGME
Trigger: TTCCATGCCTTCATGGTTCCATGGATGCCACGTCATTGGACATCATGTAGCCCTTTGGGGGTTTCTCCCATTTCTAAGTTTGTATACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp AGCACTGCAAGTTGGAAAGAATTTATCATGGAATGGATAACCTCCTaGGAAGCACACGATCCACTGACAAATAGTGAATGGGCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: STASWKEFIMEWITS*EAHDPLTNSEWALL
Trigger: CAAGAGAGCCCATTCACTATTTGTCAGTGGATCGTGTGCTTCCCAGGAGGTTATCCATTCCATGATAAATTCTTTCCAACTTGCAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp AAATTGTGCTCTTGCCCTCATATTCTGAGACAGCCATCATCAGTGTaGAATCACCCAACAATGATTCATGCCTCAGCTCTGACACTTTTC +
Preference number: 5 (lower is better)
Translates to: KLCSCPHILRQPSSV*NHPTMIHASALTLF
Trigger: GAAAAGTGTCAGAGCTGAGGCATGAATCATTGTTGGGTGATTCCACACTGATGATGGCTGTCTCAGAATATGAGGGCAAGAGCACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp GGGAACCAACCTAGTGGAGATGAAACTGAAAAATGTGGCACCTTTAGAATCCCAAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: GNQPSGDETEKCGTFRIPRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...TGGGATTCTAAAGGTGCCACATTTTTCAGTTTCATCTCCACTAGGTTGGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GAGAAGAGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 5 (lower is better)
Translates to: EKRRRLLLCLLIASTSSLRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...CAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCTCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACAAAGGGGGTGGGCTGTaGCAAAAGCCAGATCTCCCC +
Preference number: 5 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHKGGGL*QKPDLP
Trigger: GGGGAGATCTGGCTTTTGCAACAGCCCACCCCCTTT...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp TTACACTGGAAACCTGGTCTTCCTCATGATCAGGTCCTGTGTATGCCATTCTGGAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 5 (lower is better)
Translates to: LHWKPGLPHDQVLCMPFWRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...CCAGAATGGCATACACAGGACCTGATCATGAGGAAGACCAGGTTTCCAGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 5 (lower is better)
Translates to: VSRLAEIASQRREEKETLEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp AGAAGGAGACTCTTATTGTGTTTGCTGATTGCTTCGACCTCCAGTCTGACCGCTCAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: RRRLLLCLLIASTSSLTAQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...AGCGGTCAGACTGGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS TCA 90 bp GGCTTGCTGAGAAGATCATTCAGAAACCTTACCTGCAGGCTGTTTTaGAGCCATCAGCTACCATTAGAAGCACATTTTAAGATGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GLLRRSFRNLTCRLF*SHQLPLEAHFKMWL
Trigger: CAACCACATCTTAAAATGTGCTTCTAATGGTAGCTGATGGCTTCAAAACAGCCTGCAGGTAAGGTTTCTGAATGATCTTCTCAGCAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 90 bp AGAACAGGTGGAACTGCCCTAATGACTGAAATAATTGCTCCTCTTTaGTGTTCTTCAACCACCATGGATTTCGGAAGCTTGTCTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RTGGTALMTEIIAPL*CSSTTMDFGSLSLG
Trigger: TCCAAGAGACAAGCTTCCGAAATCCATGGTGGTTGAAGAACATCAAAGAGGAGCAATTATTTCAGTCATTAGGGCAGTTCCACCTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS GCA 90 bp AAAACATCTGAACTACAAGGGGAGGACATGTTCTCTACCCAGCACTaGAAGTTGGAAAGAATTTATCATGGAATGGATAACCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: KTSELQGEDMFSTQH*KLERIYHGMDNLLG
Trigger: TCCCAGGAGGTTATCCATTCCATGATAAATTCTTTCCAACTTGCAGTGCTGGGTAGAGAACATGTCCTCCCCTTGTAGTTCAGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp CACTGGTACTTCTGCCACCATGATAGAGCACATAAACTATTCAACTaGATTCTAAATATGTCATTGCTAAACCATCCCCTCCCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HWYFCHHDRAHKLFN*ILNMSLLNHPLPCE
Trigger: CTCACAGGGGAGGGGATGGTTTAGCAATGACATATTTAGAATCCAGTTGAATAGTTTATGTGCTCTATCATGGTGGCAGAAGTACCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VSRLAEIASQRREEKETLISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TATATGGCATCTCGGGAAAGTGAAGATGTGAGATGGTACATGTGCCTACATGTGATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: YMASRESEDVRWYMCLHVISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...CACATGTAGGCACATGTACCATCTCACATCTTCACTTTCCCGAGATGCCATATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS TCA 90 bp GAAATCAAGACTTCAGATAGATTATGTGGCCAGCCTGATTCAGCTTaGTTAGATTGGACTCTCATACCATTTGGGAGCTCAAAGGATAGG +
Preference number: 5 (lower is better)
Translates to: EIKTSDRLCGQPDSA*LDWTLIPFGSSKDR
Trigger: CCTATCCTTTGAGCTCCCAAATGGTATGAGAGTCCAATCTAATCAAGCTGAATCAGGCTGGCCACATAATCTATCTGAAGTCTTGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 90 bp ATCCTCTATCCAATAGATGCCAATAACAACCTCCCTTCAAAATTGTaGCAACCAAAGATAGCTCCAGATAGTACCAAATGTCCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ILYPIDANNNLPSKL*QPKIAPDSTKCPLG
Trigger: TCCCAGGGGACATTTGGTACTATCTGGAGCTATCTTTGGTTGTCACAATTTTGAAGGGAGGTTGTTATTGGCATCTATTGGATAGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp GGTCAGTTGCACTCTATTATTTCCAACCCTATATTGCTCAAATTGTaGTCTTGCCCTCATATTCTGAGACAGCCATCATCAGTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: GQLHSIISNPILLKL*SCPHILRQPSSVWN
Trigger: ATTCCACACTGATGATGGCTGTCTCAGAATATGAGGGCAAGAGCACAATTTGAGCAATATAGGGTTGGAAATAATAGAGTGCAACTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp TTTTCGAAATACTGTCACTTTTTGTCTCCATTAGGACAGGGTCAGTaGCCTCCAGGATCAGCTGGATTCAGTTTGAAGCATTCTTCATTT +
Preference number: 5 (lower is better)
Translates to: FSKYCHFLSPLGQGQ*PPGSAGFSLKHSSF
Trigger: AAATGAAGAATGCTTCAAACTGAATCCAGCTGATCCTGGAGGCCACTGACCCTGTCCTAATGGAGACAAAAAGTGACAGTATTTCGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS-3UTR CAA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATAGACTCTTATTGTGTTaGCTGATTGCTTCGACCTCC +
Preference number: 5 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYRLLLC*LIASTS
Trigger: GGAGGTCGAAGCAATCAGCAAACACAATAAGAGTCT...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 5 (lower is better)
Translates to: ITFPFPMILRSSNEASKSRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTAGAACTTTCTATTCCTaGCTGATGCATTCATCACCA +
Preference number: 5 (lower is better)
Translates to: VSRLAEIASQRREEKETLRTFYS*LMHSSP
Trigger: TGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCT...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATGAGGCACCAAAATATTaGACCACCTCCCACTTAATC +
Preference number: 5 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYEAPKY*TTSHLI
Trigger: GATTAAGTGGGAGGTGGTCAAATATTTTGGTGCCTC...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTACCTTCCCTTTCCCCATGATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTCAAATACACATTCCCTaGAGTTTCTTCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: ITFPFPMILRSSNEASKSQIHIP*SFFSGI
Trigger: GATGCCACTGAAGAAACTCAAGGGAATGTGTATTTG...ACTTTTGCTAGCTTCATTTGAGGACCTGAGAATCATGGGGAAAGGGAAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp CTAATTCCCTCTCTCGGGCTCAAAAGGCATAGTGCTACAGTTATTAATGTAGGTTCCAAGAGAACCCTTTaGTCTCTCTTTCGTACTTTG +
Preference number: 5 (lower is better)
Translates to: LIPSLGLKRHSATVINVGSKRTL*SLFRTL
Trigger: CAAAGTACGAAAGAGAGACAAAAGGGTTCTCTTGGA...ACCTACATTAATAACTGTAGCACTATGCCTTTTGAGCCCGAGAGAGGGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp ACATTCAACCTAAGCATAAGGGCTTGCAAAAGCTTAATATTATTCTaGAGTCATCGTGCAGCTCAGCGCATTAGGAAAGAAAGCTCAACG +
Preference number: 5 (lower is better)
Translates to: TFNLSIRACKSLILF*SHRAAQRIRKESST
Trigger: CGTTGAGCTTTCTTTCCTAATGCGCTGAGCTGCACGATGACTTCAGAATAATATTAAGCTTTTGCAAGCCCTTATGCTTAGGTTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 90 bp GAATACCAAAAATCATCCTCAGCATGCAAAACCCAACCCAATTTGTaGTATCTGTCATGGGAAGGATGCAAATCCAGATGTTCACACCAT +
Preference number: 5 (lower is better)
Translates to: EYQKSSSACKTQPNL*YLSWEGCKSRCSHH
Trigger: ATGGTGTGAACATCTGGATTTGCATCCTTCCCATGACAGATATCACAAATTGGGTTGGGTTTTGCATGCTGAGGATGATTTTTGGTATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 90 bp TATCTCCTTTGTTGCGTAAGTCAAGATAATAAAAGTGAAAGAATATaGCCTGTTAGAAGAATCGCTGGGCTTGAAATCAGAGAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: YLLCCVSQDNKSERI*PVRRIAGLEIRESG
Trigger: CCCGGACTCTCTGATTTCAAGCCCAGCGATTCTTCTAACAGGCCATATTCTTTCACTTTTATTATCTTGACTTACGCAACAAAGGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS-3UTR CAA 90 bp GTGTCCAGATTGGCTGAAATAGCATCCCAAAGAAGAGAAGAGAAGGAGACTCTTTTACCTATGTTCTTCTaGTACCGGATTCGCTTATTT +
Preference number: 5 (lower is better)
Translates to: VSRLAEIASQRREEKETLLPMFF*YRIRLF
Trigger: AAATAAGCGAATCCGGTACAAGAAGAACATAGGTAA...AAGAGTCTCCTTCTCTTCTCTTCTTTGGGATGCTATTTCAGCCAATCTGGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATTCTCAGGTCCTCAAATGAAGCTAGCAAAAGTTCACATGAGCCACGTTCTTATAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 5 (lower is better)
Translates to: ILRSSNEASKSSHEPRSYRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...ATAAGAACGTGGCTCATGTGAACTTTTGCTAGCTTCATTTGAGGACCTGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAAGAATTTCCATGTTCTaGCTAGCTGCCCATTCTCAC +
Preference number: 5 (lower is better)
Translates to: IVEVEGFHDKNFLFLADARISMF*LAAHSH
Trigger: GTGAGAATGGGCAGCTAGCAAGAACATGGAAATTCT...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGTCCAAGAGAACCCTTTaGTCTCTCTTTCGTACTTTG +
Preference number: 5 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQSKRTL*SLFRTL
Trigger: CAAAGTACGAAAGAGAGACAAAAGGGTTCTCTTGGA...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp AAGACTGTGCCTCTGAAACTGAGAGCTATTGCTAGCAGGGTAAGAAAGACTGTAAATAATTGCTCCTCTTaGATGTTCTTCAACCACCAT +
Preference number: 5 (lower is better)
Translates to: KTVPLKLRAIASRVRKTVNNCSS*MFFNHH
Trigger: ATGGTGGTTGAAGAACATCAAAGAGGAGCAATTATT...TACAGTCTTTCTTACCCTGCTAGCAATAGCTCTCAGTTTCAGAGGCACAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS TCA 90 bp TTTTTGCTAATGTTGACAGAATTGTACTTCTTCCAAAGAGACAAGTaGAAATGTCTGCCTAGCAGCACAGTTCAACTGGTGTTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: FLLMLTELYFFQRDK*KCLPSSTVQLVLLG
Trigger: ACCCAACAACACCAGTTGAACTGTGCTGCTAGGCAGACATTTTCACTTGTCTCTTTGGAAGAAGTACAATTCTGTCAACATTAGCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp AATAAAGGGTGCATATTGTTTATGTTATGTGAAGCCATACCTTACTaGAAGTTGTCAATAGAACTGCTTCCCCTTGGCAACTTCAAGCCA +
Preference number: 5 (lower is better)
Translates to: NKGCILFMLCEAIPY*KLSIELLPLGNFKP
Trigger: TGGCTTGAAGTTGCCAAGGGGAAGCAGTTCTATTGACAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAATATGCACCCTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 90 bp CAGAGTCTGGTTAGTAGCATGAAGAACAGAGCAAGCAATAAAGGGTaGATATTGTTTATGTTATGTGAAGCCATACCTTACTGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: QSLVSSMKNRASNKG*ILFMLCEAIPYCKL
Trigger: CAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAATATGCACCCTTTATTGCTTGCTCTGTTCTTCATGCTACTAACCAGACTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 90 bp TCAACCTTGTTGCTACTGACATTTTGGGCCAAATATTCTTTATTGTaGGAGATTATCTTATGCATTGTAGGCTGGTTAGCCCTACAATGG +
Preference number: 5 (lower is better)
Translates to: STLLLLTFWAKYSLL*EIILCIVGWLALQW
Trigger: CCATTGTAGGGCTAACCAGCCTACAATGCATAAGATAATCTCCCACAATAAAGAATATTTGGCCCAAAATGTCAGTAGCAACAAGGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGCAGGATTTCTGTCGCTaGCTTGTTGAAATTCCGTCT +
Preference number: 5 (lower is better)
Translates to: KRHSATVINVGNCIWHLGQDFCR*LVEIPS
Trigger: AGACGGAATTTCAACAAGCAAGCGACAGAAATCCTG...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCAAAAGAAGTGTCCAGATaGGCTGAAATAGCATCCCAA +
Preference number: 5 (lower is better)
Translates to: IVEVEGFHDKNFLFLADAKEVSR*AEIASQ
Trigger: TTGGGATGCTATTTCAGCCAATCTGGACACTTCTTT...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TCTTCTCTTTGTCATCACGGTGATGACATCAAGGTACTGATATTAACCAGAAGTCAAATACACATTCCCTaGAGTTTCTTCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: SSLCHHGDDIKVLILTRSQIHIP*SFFSGI
Trigger: GATGCCACTGAAGAAACTCAAGGGAATGTGTATTTG...ACTTCTGGTTAATATCAGTACCTTGATGTCATCACCGTGATGACAAAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp ATAGTTGAGGTTGAAGGGTTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATCCAAGAGAACCCTTTaGTCTCTCTTTCGTACTTTG +
Preference number: 5 (lower is better)
Translates to: IVEVEGFHDKNFLFLADASKRTL*SLFRTL
Trigger: CAAAGTACGAAAGAGAGACAAAAGGGTTCTCTTGGA...TGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAACCCTTCAACCTCAACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS TCA 90 bp ATAAGGAAAGCTATACACCACCACACAAATCTGAATGCTATTGACTaGTACAGGGCCATGCAAATACAGGATGTTACTGTTATCTGCTTA +
Preference number: 5 (lower is better)
Translates to: IRKAIHHHTNLNAID*YRAMQIQDVTVICL
Trigger: TAAGCAGATAACAGTAACATCCTGTATTTGCATGGCCCTGTATCAGTCAATAGCATTCAGATTTGTGTGGTGGTGTATAGCTTTCCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 90 bp CTGACATTTTGGGCCAAATATTCTTTATTGTGGGAGATTATCTTATaGATTGTAGGCTGGTTAGCCCTACAATGGTTATCCTCTATCCAA +
Preference number: 5 (lower is better)
Translates to: LTFWAKYSLLWEIIL*IVGWLALQWLSSIQ
Trigger: TTGGATAGAGGATAACCATTGTAGGGCTAACCAGCCTACAATGCATAAGATAATCTCCCACAATAAAGAATATTTGGCCCAAAATGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS-3UTR CAA 90 bp GTGGATATAAATGAATACCCCTATATTCACACACACACACACAAATATGTACACTCAAATCCTTCCCACTaGGCGAAAAGAAATCAGAGC +
Preference number: 5 (lower is better)
Translates to: VDINEYPYIHTHTHKYVHSNPSH*AKRNQS
Trigger: GCTCTGATTTCTTTTCGCCAAGTGGGAAGGATTTGA...GTGTACATATTTGTGTGTGTGTGTGTGAATATAGGGGTATTCATTTATATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485769.5
CDS-3UTR CAA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGATTTCTGTCGCTTGCTaGTTGAAATTCCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KRHSATVINVGNCIWHLGISVAC*LKFRLF
Trigger: GAAGAGACGGAATTTCAACAAGCAAGCGACAGAAAT...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp ACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTCAGCTAATCACTATGAAGTaGTCACAAAAATGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TIRTFYSLLMHSSPCLTQLITMK*SQKCSF
Trigger: GAAGGAGCATTTTTGTGACAACTTCATAGTGATTAG...CTGAGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp TTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTTTACCTATGTTCTTCTaGTACCGGATTCGCTTATTT +
Preference number: 5 (lower is better)
Translates to: FTIRTFYSLLMHSSPCLTLPMFF*YRIRLF
Trigger: AAATAAGCGAATCCGGTACAAGAAGAACATAGGTAA...AGTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TTTCACGATAAGAACTTTCTATTCCTTGCTGATGCATTCATCACCATGCCTAACTTACCTATGTTCTTCTaGTACCGGATTCGCTTATTT +
Preference number: 5 (lower is better)
Translates to: FHDKNFLFLADAFITMPNLPMFF*YRIRLF
Trigger: AAATAAGCGAATCCGGTACAAGAAGAACATAGGTAA...GTTAGGCATGGTGATGAATGCATCAGCAAGGAATAGAAAGTTCTTATCGTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000560641.5
ENST00000612123.3
CDS-3UTR CAA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAAGAAGGAGACTCTTATaGTGTTTGCTGATTGCTTCG +
Preference number: 5 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTRRRLL*CLLIAS
Trigger: CGAAGCAATCAGCAAACACAATAAGAGTCTCCTTCT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS-3UTR CAA 90 bp AAAAGGCATAGTGCTACAGTTATTAATGTAGGTAATTGTATATGGCATCTCGGGCAAGAAAACCATTTATaGTCCCTAGATGGCATGAAC +
Preference number: 5 (lower is better)
Translates to: KRHSATVINVGNCIWHLGQENHL*SLDGMN
Trigger: GTTCATGCCATCTAGGGACAATAAATGGTTTTCTTG...CCCGAGATGCCATATACAATTACCTACATTAATAACTGTAGCACTATGCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000559240.5
ENST00000560641.5
ENST00000612123.3
CDS CCA 90 bp CAGGAAGTAACTTCTTCATGTATCTTGATGCTCAGAGAGGTCATTTaGGTCTATGAATCTAGAACACTCAGAGAAATATCTAAATACAGT +
Preference number: 5 (lower is better)
Translates to: QEVTSSCILMLREVI*VYESRTLREISKYS
Trigger: ACTGTATTTAGATATTTCTCTGAGTGTTCTAGATTCATAGACCCAAATGACCTCTCTGAGCATCAAGATACATGAAGAAGTTACTTCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS-3UTR CAA 90 bp TACAAATTAGGAGACTGTAAAACCTACACCGTGTTAGTATCATTAGAGAACACAAAACAGAGCAGAGCTTaGCAGGTTTATATTCTGAAT +
Preference number: 5 (lower is better)
Translates to: YKLGDCKTYTVLVSLENTKQSRA*QVYILN
Trigger: ATTCAGAATATAAACCTGCAAAGCTCTGCTCTGTTT...TGTGTTCTCTAATGATACTAACACGGTGTAGGTTTTACAGTCTCCTAATTTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420696.7
ENST00000540236.3
ENST00000612123.3
CDS CCA 72 bp GACAGGCCGGGGTGTCCGGCCATCCCGACCCCAGCATaGGAATGCATCAGCCTGGGCTGCTCGTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: DRPGCPAIPTPA*ECISLGCSSIS
Trigger: GGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS GCA 72 bp CCGGGGTGTCCGGCCATCCCGACCCCAGCATGGGAATaGATCAGCCTGGGCTGCTCGTCCATCTCCAAAGGC +
Preference number: 6 (lower is better)
Translates to: PGCPAIPTPAWE*ISLGCSSISKG
Trigger: GCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCGGACACCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS CCA 72 bp GATCCTTCCCAGGAACAGACCCTAGGCCCGGCTCCCTaGGAACAGACCGCAGGCACCCCTCTGCCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: DPSQEQTLGPAP*EQTAGTPLPQR
Trigger: CCTCTGAGGCAGAGGGGTGCCTGCGGTCTGTTCCCAGGGAGCCGGGCCTAGGGTCTGTTCCTGGGAAGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS GCA 72 bp TCCAAAGGCTACGGCAGCCCCCGGCTCTTCCTCTTCTaGTCCTCGGCTCGGCTCCTGGGAAGCACCAAGGCT +
Preference number: 6 (lower is better)
Translates to: SKGYGSPRLFLF*SSARLLGSTKA
Trigger: AGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGGGGCTGCCGTAGCCTTTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS GCA 72 bp ATCCCGACCCCAGCATGGGAATGCATCAGCCTGGGCTaGTCGTCCATCTCCAAAGGCTACGGCAGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: IPTPAWECISLG*SSISKGYGSPR
Trigger: CCGGGGGCTGCCGTAGCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS GCA 72 bp GCCCGGCTCCCTGGGAACAGACCGCAGGCACCCCTCTaGCTCAGAGGCTCTGAATGTGACTCCAAGCCCACA +
Preference number: 6 (lower is better)
Translates to: ARLPGNRPQAPL*LRGSECDSKPT
Trigger: TGTGGGCTTGGAGTCACATTCAGAGCCTCTGAGGCAGAGGGGTGCCTGCGGTCTGTTCCCAGGGAGCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 72 bp CGGCCATCCCGACCCCAGCATGGGAATGCATCAGCCTaGGCTGCTCGTCCATCTCCAAAGGCTACGGCAGCC +
Preference number: 6 (lower is better)
Translates to: RPSRPQHGNASA*AARPSPKATAA
Trigger: GGCTGCCGTAGCCTTTGGAGATGGACGAGCAGCCCAGGCTGATGCATTCCCATGCTGGGGTCGGGATGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
ENST00000627490.2
CDS TCA 72 bp CCACCGAGGTCTGCACAGCACCGGCACTTTGCATATTaGAAACGCGGCTCCAGCGGGCCCCACGGAACAGAT +
Preference number: 6 (lower is better)
Translates to: PPRSAQHRHFAY*KRGSSGPHGTD
Trigger: ATCTGTTCCGTGGGGCCCGCTGGAGCCGCGTTTTCAATATGCAAAGTGCCGGTGCTGTGCAGACCTCGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 72 bp AGCCGCATCAGCTGGGGGTCTGTGGGTTCCTCCTCCTaGGCTCCTCGGATACTCAAAACTGAAGCACAGGGG +
Preference number: 6 (lower is better)
Translates to: SRISWGSVGSSS*APRILKTEAQG
Trigger: CCCCTGTGCTTCAGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496120.6
CDS CCA 72 bp AGCCGCATCAGCTGGGGGTCTGTGGGTTCCTCCTCCTaGGCTCCTCGGATACTCAAAACTTGCTGCCATCGC +
Preference number: 6 (lower is better)
Translates to: SRISWGSVGSSS*APRILKTCCHR
Trigger: GCGATGGCAGCAAGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559560.1
CDS CCA 72 bp AGCCGCATCAGCTGGGGGTCTGTGGGTTCCTCCTCCTaGGCTCCTCGGATACTCAAAACCACGTGCTCACAC +
Preference number: 6 (lower is better)
Translates to: SRISWGSVGSSS*APRILKTTCSH
Trigger: GTGTGAGCACGTGGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CAA 72 bp ACCACCGAGGTCTGCACAGCACCGGCACTTTGCATATaGAAAACGCGGCTCCAGCGGGCCCCACGGAACAGA +
Preference number: 6 (lower is better)
Translates to: TTEVCTAPALCI*KTRLQRAPRNR
Trigger: TCTGTTCCGTGGGGCCCGCTGGAGCCGCGTTTTCAATATGCAAAGTGCCGGTGCTGTGCAGACCTCGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 72 bp AGCCGCATCAGCTGGGGGTCTGTGGGTTCCTCCTCCTaGGCTCCTCGGATACTCAAAACTTTGCCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SRISWGSVGSSS*APRILKTLPSP
Trigger: GGGAGAAGGCAAAGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468104.5
CDS TCA 72 bp GGTGGCAACCAAGGCCTCTGTCCCGAGTCACAGAGATaGAACCCCGTGGAACTAGGGCACGGGAAGATGAGT +
Preference number: 6 (lower is better)
Translates to: GGNQGLCPESQR*NPVELGHGKMS
Trigger: ACTCATCTTCCCGTGCCCTAGTTCCACGGGGTTTCATCTCTGTGACTCGGGACAGAGGCCTTGGTTGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp TTCCGTCGGCACAAGTTGTTTCCCAGGGACGAACTCTaGTCCATGACGGGACTCTGCAATGGCAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: FRRHKLFPRDEL*SMTGLCNGSSH
Trigger: GTGGCTGCTGCCATTGCAGAGTCCCGTCATGGATCAGAGTTCGTCCCTGGGAAACAACTTGTGCCGACGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp CCCTTGCAAGGATCCCATCTGCAAGGAAGGGAGGTATaGGGGGAGCAAAGGAAGAACTCCTTCCGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: PLQGSHLQGREV*GEQRKNSFRRH
Trigger: GTGCCGACGGAAGGAGTTCTTCCTTTGCTCCCCTCATACCTCCCTTCCTTGCAGATGGGATCCTTGCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 72 bp GGGCTCTTCCCCACTTCACTCGGCACTTCTTCCTGCTaGCTTATGAAGAAGCTGCCTTGCTTCCCCTTCACC +
Preference number: 6 (lower is better)
Translates to: GLFPTSLGTSSC*LMKKLPCFPFT
Trigger: GGTGAAGGGGAAGCAAGGCAGCTTCTTCATAAGGCAGCAGGAAGAAGTGCCGAGTGAAGTGGGGAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp GTGCTCACACGCGGCCTTCTGAATTTCACTTCTGCATaGAAAACCACCACCACCGAGGTCTGCACAGCACCG +
Preference number: 6 (lower is better)
Translates to: VLTRGLLNFTSA*KTTTTEVCTAP
Trigger: CGGTGCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAGGCCGCGTGTGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS GCA 72 bp CCACGTGCTCACACGCGGCCTTCTGAATTTCACTTCTaGATGCAAAACCACCACCACCGAGGTCTGCACAGC +
Preference number: 6 (lower is better)
Translates to: PRAHTRPSEFHF*MQNHHHRGLHS
Trigger: GCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAGGCCGCGTGTGAGCACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 72 bp CCCGGCTCTTCCTCTTCTGCTCCTCGGCTCGGCTCCTaGGAAGCACCAAGGCTTTTTATCCTTCAAGCTTGT +
Preference number: 6 (lower is better)
Translates to: PGSSSSAPRLGS*EAPRLFILQAC
Trigger: ACAAGCTTGAAGGATAAAAAGCCTTGGTGCTTCCCAGGAGCCGAGCCGAGGAGCAGAAGAGGAAGAGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340699.7
ENST00000420696.7
ENST00000485769.5
CDS CCA 72 bp CAGGGACGAACTCTGATCCATGACGGGACTCTGCAATaGCAGCAGCCACAGGTTTTATGTCCCCGAGCACAG +
Preference number: 6 (lower is better)
Translates to: QGRTLIHDGTLQ*QQPQVLCPRAQ
Trigger: CTGTGCTCGGGGACATAAAACCTGTGGCTGCTGCCATTGCAGAGTCCCGTCATGGATCAGAGTTCGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CAA 72 bp GTCAGGCCAGACCTGAAGCTACACCATAAGCTGCCTTaGGTGGCAACCAAGGCCTCTGTCCCGAGTCACAGA +
Preference number: 6 (lower is better)
Translates to: VRPDLKLHHKLP*VATKASVPSHR
Trigger: TCTGTGACTCGGGACAGAGGCCTTGGTTGCCACCAAAGGCAGCTTATGGTGTAGCTTCAGGTCTGGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp GGCTTTGCTCTCGCAGGAGATTCATCACGTGGGTGGTaGACTCGTTGCAGGCCTGCTCGTATTTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GFALAGDSSRGW*TRCRPARISPA
Trigger: AGCTGGAGAAATACGAGCAGGCCTGCAACGAGTTCACCACCCACGTGATGAATCTCCTGCGAGAGCAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000468104.5
ENST00000482110.5
ENST00000496120.6
ENST00000540236.3
ENST00000558837.5
ENST00000559240.5
ENST00000559560.1
ENST00000559578.1
ENST00000560469.5
ENST00000560641.5
ENST00000612123.3
ENST00000627490.2
CDS TCA 72 bp CCTCCATTAGCACTGATGCCCTGCGGACTGTACATCTaGCTGGCTGCGAGTCCATCACTGTATCCTCCTGTC +
Preference number: 6 (lower is better)
Translates to: PPLALMPCGLYI*LAASPSLYPPV
Trigger: GACAGGAGGATACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCTAATGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000465089.2
ENST00000468104.5
ENST00000496120.6
ENST00000540236.3
ENST00000559240.5
ENST00000560469.5
ENST00000560641.5
ENST00000612123.3
CDS GCA 72 bp AGCACTGATGCCCTGCGGACTGTACATCTGACTGGCTaGGAGTCCATCACTGTATCCTCCTGTCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: STDALRTVHLTG*ESITVSSCLAD
Trigger: ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000367897.5
ENST00000420696.7
ENST00000465089.2
ENST00000468104.5
ENST00000496120.6
ENST00000540236.3
ENST00000559240.5
ENST00000560469.5
ENST00000560641.5
ENST00000612123.3
CDS GCA 72 bp AAGCTGCCTTGCTTCCCCTTCACCTTCTGCCATGACTaGAAGTTTCCTGAGGCCTCTCCAGCCATGCTAACC +
Preference number: 6 (lower is better)
Translates to: KLPCFPFTFCHD*KFPEASPAMLT
Trigger: GGTTAGCATGGCTGGAGAGGCCTCAGGAAACTTGCAGTCATGGCAGAAGGTGAAGGGGAAGCAAGGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp GTGACTGATGCCCTGCGGACTGTACATCTGACTGGCTaGGAGTCCATCACTGTATCCTCCTGTCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: VTDALRTVHLTG*ESITVSSCLAD
Trigger: ATCAGCCAGACAGGAGGATACAGTGATGGACTCGCAGCCAGTCAGATGTACAGTCCGCAGGGCATCAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627490.2
CDS CCA 72 bp CTGAGAAAGCATGTCCGAAGCAGGAAAATGGCCTGGTaGCTTTACTGGCCCAGACTAGGTCACTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: LRKHVRSRKMAW*LYWPRLGHWMA
Trigger: GGCCATCCAGTGACCTAGTCTGGGCCAGTAAAGCCACCAGGCCATTTTCCTGCTTCGGACATGCTTTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp TATCACAAGTCTGCTGTGGCACATGGCCATGGAATGTaGCCGTCAGAGGCAGCTCAGAGAGGACACAACTGG +
Preference number: 6 (lower is better)
Translates to: YHKSAVAHGHGM*PSEAAQRGHNW
Trigger: CCAGTTGTGTCCTCTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 72 bp CAGCTGAGAAAGCATGTCCGAAGCAGGAAAATGGCCTaGTGGCTTTACTGGCCCAGACTAGGTCACTGGATG +
Preference number: 6 (lower is better)
Translates to: QLRKHVRSRKMA*WLYWPRLGHWM
Trigger: CATCCAGTGACCTAGTCTGGGCCAGTAAAGCCACCAGGCCATTTTCCTGCTTCGGACATGCTTTCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp GCAGCCACAGGTTTTATGTCCCCGAGCACAGTGGCCTaGTTACTCAGTTACCAATTCCATCAGCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: AATGFMSPSTVA*LLSYQFHQQPE
Trigger: CTCAGGCTGCTGATGGAATTGGTAACTGAGTAATCAGGCCACTGTGCTCGGGGACATAAAACCTGTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp CGGATACTCAAAACCACGTGCTCACACGCGGCCTTCTaGATTTCACTTCTGCATGCAAAACCACCACCACCG +
Preference number: 6 (lower is better)
Translates to: RILKTTCSHAAF*ISLLHAKPPPP
Trigger: CGGTGGTGGTGGTTTTGCATGCAGAAGTGAAATTCAGAAGGCCGCGTGTGAGCACGTGGTTTTGAGTATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS GCA 72 bp TTCACTTCTGCATGCAAAACCACCACCACCGAGGTCTaGACAGCACCGGCACTTTGCATATTGAAAACGCGG +
Preference number: 6 (lower is better)
Translates to: FTSACKTTTTEV*TAPALCILKTR
Trigger: CCGCGTTTTCAATATGCAAAGTGCCGGTGCTGTGCAGACCTCGGTGGTGGTGGTTTTGCATGCAGAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560469.5
CDS CCA 72 bp AGCCGCATCAGCTGGGGGTCTGTGGGTTCCTCCTCCTaGGCTCCTCGGATACTCAAAACATATTATTATTGC +
Preference number: 6 (lower is better)
Translates to: SRISWGSVGSSS*APRILKTYYYC
Trigger: GCAATAATAATATGTTTTGAGTATCCGAGGAGCCCAGGAGGAGGAACCCACAGACCCCCAGCTGATGCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS CAA 90 bp TCTCTAGACCTAGGATCTCTCTTCTATGCCTCTAAAATTCTAGGGTaGGCCAGGGGACCACAAGATGGAGGCTATGGGCTGGTCACTGGT +
Preference number: 6 (lower is better)
Translates to: SLDLGSLFYASKILG*ARGPQDGGYGLVTG
Trigger: ACCAGTGACCAGCCCATAGCCTCCATCTTGTGGTCCCCTGGCCAACCCTAGAATTTTAGAGGCATAGAAGAGAGATCCTAGGTCTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp GGCACTTCTTCCTGCTGCCTTATGAAGAAGCTGCCTTaGTTCCCCTTCACCTTCTGCCATGACTGCAAGTTT +
Preference number: 6 (lower is better)
Translates to: GTSSCCLMKKLP*FPFTFCHDCKF
Trigger: AAACTTGCAGTCATGGCAGAAGGTGAAGGGGAAGCAAGGCAGCTTCTTCATAAGGCAGCAGGAAGAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp CAGGGGACCACAAGATGGAGGCTATGGGCTGGTCACTaGTACTTCTGCCACCATGATAGAGCACATAAACTA +
Preference number: 6 (lower is better)
Translates to: QGTTRWRLWAGH*YFCHHDRAHKL
Trigger: TAGTTTATGTGCTCTATCATGGTGGCAGAAGTACCAGTGACCAGCCCATAGCCTCCATCTTGTGGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp AAATCAGTATCACAAGTCTGCTGTGGCACATGGCCATaGAATGTGACCGTCAGAGGCAGCTCAGAGAGGACA +
Preference number: 6 (lower is better)
Translates to: KSVSQVCCGTWP*NVTVRGSSERT
Trigger: TGTCCTCTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CAA 72 bp CTAGGATCTCTCTTCTATGCCTCTAAAATTCTAGGGTaGGCCAGGGGACCACAAGATGGAGGCTATGGGCTG +
Preference number: 6 (lower is better)
Translates to: LGSLFYASKILG*ARGPQDGGYGL
Trigger: CAGCCCATAGCCTCCATCTTGTGGTCCCCTGGCCAACCCTAGAATTTTAGAGGCATAGAAGAGAGATCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp ATGGGAGAAACCCCCAAAGGGCTACATGATGTCCAATaGCGTGGCATCCATGGAACCATGAAGGCATGGAAT +
Preference number: 6 (lower is better)
Translates to: MGETPKGLHDVQ*RGIHGTMKAWN
Trigger: ATTCCATGCCTTCATGGTTCCATGGATGCCACGTCATTGGACATCATGTAGCCCTTTGGGGGTTTCTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp GGGTTCCCGGAGGTAGAAGCAGAGGAGAGTACTCTGTaGCGAACAGAACTTTGTATCCTAGTCACCAAAAAG +
Preference number: 6 (lower is better)
Translates to: GFPEVEAEESTL*RTELCILVTKK
Trigger: CTTTTTGGTGACTAGGATACAAAGTTCTGTTCGGCACAGAGTACTCTCCTCTGCTTCTACCTCCGGGAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468104.5
CDS GCA 72 bp ATAATAAGTGGGCCTCAAGAAGGGCCATTAGCCATCTaGTTTTCACCTCCCAGGGATGGAAGCATCATCCAG +
Preference number: 6 (lower is better)
Translates to: IISGPQEGPLAI*FSPPRDGSIIQ
Trigger: CTGGATGATGCTTCCATCCCTGGGAGGTGAAAAGCAGATGGCTAATGGCCCTTCTTGAGGCCCACTTATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp CAGAATGAAAGAAAAGGGCCTGACAACTCTAAGAGCTaGTCTGCCCTTGCAAGGATCCCATCTGCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: QNERKGPDNSKS*SALARIPSARK
Trigger: CTTCCTTGCAGATGGGATCCTTGCAAGGGCAGAGCAGCTCTTAGAGTTGTCAGGCCCTTTTCTTTCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CCA 72 bp TCCTGGGAAGCACACGATCCACTGACAAATAGTGAATaGGCTCTCTTGGAGGTGCTGTGGCATTCTCAAAGA +
Preference number: 6 (lower is better)
Translates to: SWEAHDPLTNSE*ALLEVLWHSQR
Trigger: TCTTTGAGAATGCCACAGCACCTCCAAGAGAGCCCATTCACTATTTGTCAGTGGATCGTGTGCTTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp GGCCTTAGCAAAACAAGTGTAAGATCTGGCCAGGTGTaGCTTATACCCAGTCAGTGGGACAAAGCCTTTGGT +
Preference number: 6 (lower is better)
Translates to: GLSKTSVRSGQV*LIPSQWDKAFG
Trigger: ACCAAAGGCTTTGTCCCACTGACTGGGTATAAGCCACACCTGGCCAGATCTTACACTTGTTTTGCTAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp ACACTAAAATCAGTATCACAAGTCTGCTGTGGCACATaGCCATGGAATGTGACCGTCAGAGGCAGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: TLKSVSQVCCGT*PWNVTVRGSSE
Trigger: CTCTGAGCTGCCTCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 72 bp CTTGGTAGAGTGGGTAGTTTTGCTCCCCTGAAGCTATaGCACACTGGGTGGTTTCTAAACTCTGGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LGRVGSFAPLKL*HTGWFLNSGSF
Trigger: AAAGCTGCCAGAGTTTAGAAACCACCCAGTGTGCCATAGCTTCAGGGGAGCAAAACTACCCACTCTACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 72 bp AGACGGATGGATGAGCTGATGAACAGGTTCTTCCCGTaGGTTCTGGAAGAGCTGTACCAAAACCAGGCTTTT +
Preference number: 6 (lower is better)
Translates to: RRMDELMNRFFP*VLEELYQNQAF
Trigger: AAAAGCCTGGTTTTGGTACAGCTCTTCCAGAACCCACGGGAAGAACCTGTTCATCAGCTCATCCATCCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474046.1
ENST00000498497.2
CDS GCA 72 bp TGGCCAAGGACAACACTAAAATCAGTATCACAAGTCTaGTGTGGCACATGGCCATGGAATGTGACCGTCAGA +
Preference number: 6 (lower is better)
Translates to: WPRTTLKSVSQV*CGTWPWNVTVR
Trigger: TCTGACGGTCACATTCCATGGCCATGTGCCACAGCAGACTTGTGATACTGATTTTAGTGTTGTCCTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CAA 90 bp TCCTGGGAAGCACACGATCCACTGACAAATAGTGAATGGGCTCTCTaGGAGGTGCTGTGGCATTCTCAAAGAACTGAAACAGAAAGACTT +
Preference number: 6 (lower is better)
Translates to: SWEAHDPLTNSEWAL*EVLWHSQRTETERL
Trigger: AAGTCTTTCTGTTTCAGTTCTTTGAGAATGCCACAGCACCTCCAAGAGAGCCCATTCACTATTTGTCAGTGGATCGTGTGCTTCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp TCCACTGCGGTGAACCTAGCCCACATTCAACCTAAGCATAAGGGCTaGCAAAAGCTTAATATTATTCTGAAGTCATCGTGCAGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: STAVNLAHIQPKHKG*QKLNIILKSSCSSA
Trigger: CGCTGAGCTGCACGATGACTTCAGAATAATATTAAGCTTTTGCAAGCCCTTATGCTTAGGTTGAATGTGGGCTAGGTTCACCGCAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp CATGATAGAGCACATAAACTATTCAACTGGATTCTAAATATGTCATaGCTAAACCATCCCCTCCCCTGTGAGGAGCAGCACCTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: HDRAHKLFNWILNMS*LNHPLPCEEQHLGG
Trigger: CCCTCCCAGGTGCTGCTCCTCACAGGGGAGGGGATGGTTTAGCAATGACATATTTAGAATCCAGTTGAATAGTTTATGTGCTCTATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp ACCACAATGAAGCAGACGGAAGTCCACAAAAACATCTaGACTACAAGGGGAGGACATGTTCTCTACCCAGCA +
Preference number: 6 (lower is better)
Translates to: TTMKQTEVHKNI*TTRGGHVLYPA
Trigger: TGCTGGGTAGAGAACATGTCCTCCCCTTGTAGTTCAGATGTTTTTGTGGACTTCCGTCTGCTTCATTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp TTGGTTTGGGAAGGAAGGCAAGCAGCTCATTTAAACTaGCACCCAGACATTTGGGGCATGTGCAGAACTAAA +
Preference number: 6 (lower is better)
Translates to: LVWEGRQAAHLN*HPDIWGMCRTK
Trigger: TTTAGTTCTGCACATGCCCCAAATGTCTGGGTGGCAGTTTAAATGAGCTGCTTGCCTTCCTTCCCAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp ACAAGATGGAGGCTATGGGCTGGTCACTGGTACTTCTaGCACCATGATAGAGCACATAAACTATTCAACTGG +
Preference number: 6 (lower is better)
Translates to: TRWRLWAGHWYF*HHDRAHKLFNW
Trigger: CCAGTTGAATAGTTTATGTGCTCTATCATGGTGGCAGAAGTACCAGTGACCAGCCCATAGCCTCCATCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp GGTCAAAGGAGAGACCAGGTGAACTTAATTGAATCATaGGGGCAGTTTCCTCCATGCTGTTGTGATAGTGAG +
Preference number: 6 (lower is better)
Translates to: GQRRDQVNLIES*GQFPPCCCDSE
Trigger: CTCACTATCACAACAGCATGGAGGAAACTGCCCCCATGATTCAATTAAGTTCACCTGGTCTCTCCTTTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp TACTGTCACTTTTTGTCTCCATTAGGACAGGGTCAGTaGCCTCCAGGATCAGCTGGATTCAGTTTGAAGCAT +
Preference number: 6 (lower is better)
Translates to: YCHFLSPLGQGQ*PPGSAGFSLKH
Trigger: ATGCTTCAAACTGAATCCAGCTGATCCTGGAGGCCACTGACCCTGTCCTAATGGAGACAAAAAGTGACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CAA 72 bp GCACACGATCCACTGACAAATAGTGAATGGGCTCTCTaGGAGGTGCTGTGGCATTCTCAAAGAACTGAAACA +
Preference number: 6 (lower is better)
Translates to: AHDPLTNSEWAL*EVLWHSQRTET
Trigger: TGTTTCAGTTCTTTGAGAATGCCACAGCACCTCCAAGAGAGCCCATTCACTATTTGTCAGTGGATCGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp TCTGAACTACAAGGGGAGGACATGTTCTCTACCCAGCACTGCAAGTaGGAAAGAATTTATCATGGAATGGATAACCTCCTGGGAAGCACA +
Preference number: 6 (lower is better)
Translates to: SELQGEDMFSTQHCK*ERIYHGMDNLLGST
Trigger: TGTGCTTCCCAGGAGGTTATCCATTCCATGATAAATTCTTTCCAACTTGCAGTGCTGGGTAGAGAACATGTCCTCCCCTTGTAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp GGGAACAAAGAAGTGCTATCGTCAAACACAGTGCCCCAGATCTTTTaGCCAATACAAGGTGACATAAGGACTCTGTCTCAGGAACCTCAT +
Preference number: 6 (lower is better)
Translates to: GNKEVLSSNTVPQIF*PIQGDIRTLSQEPH
Trigger: ATGAGGTTCCTGAGACAGAGTCCTTATGTCACCTTGTATTGGCAAAAAGATCTGGGGCACTGTGTTTGACGATAGCACTTCTTTGTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp AACAGAACTTTGTATCCTAGTCACCAAAAAGAACAATaGGGGGCAGTTCCGACTCCTGGCCTCCTTCAATTC +
Preference number: 6 (lower is better)
Translates to: NRTLYPSHQKEQ*GAVPTPGLLQF
Trigger: GAATTGAAGGAGGCCAGGAGTCGGAACTGCCCCTCATTGTTCTTTTTGGTGACTAGGATACAAAGTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468104.5
CDS TCA 72 bp AAACTTAGAAATGGGAGAAACCCCCAAAGGGCTACATaGTGTCCAATGACGTGGCATCCATGGAACCATGAA +
Preference number: 6 (lower is better)
Translates to: KLRNGRNPQRAT*CPMTWHPWNHE
Trigger: TTCATGGTTCCATGGATGCCACGTCATTGGACATCATGTAGCCCTTTGGGGGTTTCTCCCATTTCTAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp GCTCACGTATTTTACTTCTCTCCCATCGTCTCTAGATaGTGTCTCATCACCCAGAGAGTCAACCTTAAGGTC +
Preference number: 6 (lower is better)
Translates to: AHVFYFSPIVSR*CLITQRVNLKV
Trigger: GACCTTAAGGTTGACTCTCTGGGTGATGAGACATCATCTAGAGACGATGGGAGAGAAGTAAAATACGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp AAACACAGTGCCCCAGATCTTTTTGCCAATACAAGGTaGCATAAGGACTCTGTCTCAGGAACCTCATGGGAA +
Preference number: 6 (lower is better)
Translates to: KHSAPDLFANTR*HKDSVSGTSWE
Trigger: TTCCCATGAGGTTCCTGAGACAGAGTCCTTATGTCACCTTGTATTGGCAAAAAGATCTGGGGCACTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 72 bp AAAAGACACGTTAGCCTTGAAGTTATCCCTCAGGCCTaGTACCCTTGTGTCTTCTTCATTAACTGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: KRHVSLEVIPQA*YPCVFFINCLC
Trigger: ACAGAGGCAGTTAATGAAGAAGACACAAGGGTAGCAGGCCTGAGGGATAACTTCAAGGCTAACGTGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS CCA 72 bp TATGATAGTTCTGATAGCCAAGGAACAGGTCAGGGCTaGAGCCCAGAACTGGATATGGTCATATCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: YDSSDSQGTGQG*SPELDMVISEK
Trigger: TTTCTCAGATATGACCATATCCAGTTCTGGGCTCCAGCCCTGACCTGTTCCTTGGCTATCAGAACTATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558837.5
CDS CAA 72 bp GAAGTGCTATCGTCAAACACAGTGCCCCAGATCTTTTaGCCAATACAAGGTGACATAAGGACTCTGTCTCAG +
Preference number: 6 (lower is better)
Translates to: EVLSSNTVPQIF*PIQGDIRTLSQ
Trigger: CTGAGACAGAGTCCTTATGTCACCTTGTATTGGCAAAAAGATCTGGGGCACTGTGTTTGACGATAGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CAA 90 bp AGAAACAGTCCCTTGTGCTCTTGGCTGTGCTGTTTCAGCATTTCATaGTGTCTGTACACCCATGTACAATATTACCATGGCTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: RNSPLCSWLCCFSIS*CLYTHVQYYHGFSL
Trigger: GAGTGAGAAGCCATGGTAATATTGTACATGGGTGTACAGACACAATGAAATGCTGAAACAGCACAGCCAAGAGCACAAGGGACTGTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp CTTAGGGACCCAGGTCAGTTGCACTCTATTATTTCCAACCCTATATaGCTCAAATTGTGCTCTTGCCCTCATATTCTGAGACAGCCATCA +
Preference number: 6 (lower is better)
Translates to: LRDPGQLHSIISNPI*LKLCSCPHILRQPS
Trigger: TGATGGCTGTCTCAGAATATGAGGGCAAGAGCACAATTTGAGCAATATAGGGTTGGAAATAATAGAGTGCAACTGACCTGGGTCCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp CCCAGTGACTTGGAGGACCTTATCATAACAAATTTATaGATCTGGAAGCTCACAGAAGACATCAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: PSDLEDLIITNL*IWKLTEDISLW
Trigger: CCACAGACTGATGTCTTCTGTGAGCTTCCAGATGCATAAATTTGTTATGATAAGGTCCTCCAAGTCACTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp GCCTGGAAAAGGAAAGACCTTAGGGACCCAGGTCAGTaGCACTCTATTATTTCCAACCCTATATTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: AWKRKDLRDPGQ*HSIISNPILLK
Trigger: TTTGAGCAATATAGGGTTGGAAATAATAGAGTGCAACTGACCTGGGTCCCTAAGGTCTTTCCTTTTCCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp GCACATAAACTATTCAACTGGATTCTAAATATGTCATaGCTAAACCATCCCCTCCCCTGTGAGGAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: AHKLFNWILNMS*LNHPLPCEEQH
Trigger: GTGCTGCTCCTCACAGGGGAGGGGATGGTTTAGCAATGACATATTTAGAATCCAGTTGAATAGTTTATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp ACTTCAGATAGATTATGTGGCCAGCCTGATTCAGCTTaGTTAGATTGGACTCTCATACCATTTGGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: TSDRLCGQPDSA*LDWTLIPFGSS
Trigger: TGAGCTCCCAAATGGTATGAGAGTCCAATCTAATCAAGCTGAATCAGGCTGGCCACATAATCTATCTGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp CTATATTGCTCAAATTGTGCTCTTGCCCTCATATTCTaGGACAGCCATCATCAGTGTGGAATCACCCAACAA +
Preference number: 6 (lower is better)
Translates to: LYCSNCALALIF*DSHHQCGITQQ
Trigger: TTGTTGGGTGATTCCACACTGATGATGGCTGTCTCAGAATATGAGGGCAAGAGCACAATTTGAGCAATATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp GGAACTGCCCTAATGACTGAAATAATTGCTCCTCTTTaGTGTTCTTCAACCACCATGGATTTCGGAAGCTTG +
Preference number: 6 (lower is better)
Translates to: GTALMTEIIAPL*CSSTTMDFGSL
Trigger: CAAGCTTCCGAAATCCATGGTGGTTGAAGAACATCAAAGAGGAGCAATTATTTCAGTCATTAGGGCAGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS TCA 72 bp CTCCTCGGATACTCAAAACTTGGAGATGAGTTAAGCTaGTCTGGCCTTATGATAGTTCTGATAGCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: LLGYSKLGDELS*SGLMIVLIAKE
Trigger: TTCCTTGGCTATCAGAACTATCATAAGGCCAGATCAGCTTAACTCATCTCCAAGTTTTGAGTATCCGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558837.5
CDS GCA 72 bp CCTGGAAAAGGAAAGACCTTAGGGACCCAGGTCAGTTaGACTCTATTATTTCCAACCCTATATTGCTCAAAT +
Preference number: 6 (lower is better)
Translates to: PGKGKTLGTQVS*TLLFPTLYCSN
Trigger: ATTTGAGCAATATAGGGTTGGAAATAATAGAGTGCAACTGACCTGGGTCCCTAAGGTCTTTCCTTTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp GACTTGGAGGACCTTATCATAACAAATTTATGCATCTaGAAGCTCACAGAAGACATCAGTCTGTGGAACCCT +
Preference number: 6 (lower is better)
Translates to: DLEDLIITNLCI*KLTEDISLWNP
Trigger: AGGGTTCCACAGACTGATGTCTTCTGTGAGCTTCCAGATGCATAAATTTGTTATGATAAGGTCCTCCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp AGATGGAACTCTCTCTGGTTATTGAACCTGTTAGCTTaGATCCCTTGTCAATCACACCATGATGGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: RWNSLWLLNLLA*IPCQSHHDGGR
Trigger: TCTTCCTCCATCATGGTGTGATTGACAAGGGATCAAAGCTAACAGGTTCAATAACCAGAGAGAGTTCCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp CCAAGAAGAATCAGCTCCAAGAACCCAAATTATAATTaGTTATATGTCATCAGACTCCCCCACCCAACTCCC +
Preference number: 6 (lower is better)
Translates to: PRRISSKNPNYN*LYVIRLPHPTP
Trigger: GGGAGTTGGGTGGGGGAGTCTGATGACATATAACAAATTATAATTTGGGTTCTTGGAGCTGATTCTTCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp TCATCAGAACCAAGAAGAATCAGCTCCAAGAACCCAAATTATAATTaGTTATATGTCATCAGACTCCCCCACCCAACTCCCCAGAGTGTT +
Preference number: 6 (lower is better)
Translates to: SSEPRRISSKNPNYN*LYVIRLPHPTPQSV
Trigger: AACACTCTGGGGAGTTGGGTGGGGGAGTCTGATGACATATAACAAATTATAATTTGGGTTCTTGGAGCTGATTCTTCTTGGTTCTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp GGGTGCATATTGTTTATGTTATGTGAAGCCATACCTTACTGCAAGTaGTCAATAGAACTGCTTCCCCTTGGCAACTTCAAGCCAAGAAAG +
Preference number: 6 (lower is better)
Translates to: GCILFMLCEAIPYCK*SIELLPLGNFKPRK
Trigger: CTTTCTTGGCTTGAAGTTGCCAAGGGGAAGCAGTTCTATTGACAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAATATGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp AAGAAGGCCACAAAAGAAGTGCTGGGTATAGCCCAGTaGCTTGGAGGACCTTATCATAACAAATTTATGCAT +
Preference number: 6 (lower is better)
Translates to: KKATKEVLGIAQ*LGGPYHNKFMH
Trigger: ATGCATAAATTTGTTATGATAAGGTCCTCCAAGTCACTGGGCTATACCCAGCACTTCTTTTGTGGCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp AAATCATCCTCAGCATGCAAAACCCAACCCAATTTGTaGTATCTGTCATGGGAAGGATGCAAATCCAGATGT +
Preference number: 6 (lower is better)
Translates to: KSSSACKTQPNL*YLSWEGCKSRC
Trigger: ACATCTGGATTTGCATCCTTCCCATGACAGATATCACAAATTGGGTTGGGTTTTGCATGCTGAGGATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp GCTATACACCACCACACAAATCTGAATGCTATTGACTaGTACAGGGCCATGCAAATACAGGATGTTACTGTT +
Preference number: 6 (lower is better)
Translates to: AIHHHTNLNAID*YRAMQIQDVTV
Trigger: AACAGTAACATCCTGTATTTGCATGGCCCTGTATCAGTCAATAGCATTCAGATTTGTGTGGTGGTGTATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp GAAAGCTATACACCACCACACAAATCTGAATGCTATTaGCTGATACAGGGCCATGCAAATACAGGATGTTAC +
Preference number: 6 (lower is better)
Translates to: ESYTPPHKSECY*LIQGHANTGCY
Trigger: GTAACATCCTGTATTTGCATGGCCCTGTATCAGTCAATAGCATTCAGATTTGTGTGGTGGTGTATAGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 72 bp ATTATTTCCAACCCTATATTGCTCAAATTGTGCTCTTaGCCTCATATTCTGAGACAGCCATCATCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: IISNPILLKLCS*PHILRQPSSVW
Trigger: CCACACTGATGATGGCTGTCTCAGAATATGAGGGCAAGAGCACAATTTGAGCAATATAGGGTTGGAAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp AGTTGGAAAGAATTTATCATGGAATGGATAACCTCCTaGGAAGCACACGATCCACTGACAAATAGTGAATGG +
Preference number: 6 (lower is better)
Translates to: SWKEFIMEWITS*EAHDPLTNSEW
Trigger: CCATTCACTATTTGTCAGTGGATCGTGTGCTTCCCAGGAGGTTATCCATTCCATGATAAATTCTTTCCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp CAGCGCATTAGGAAAGAAAGCTCAACGTGCAAGGTTTaGTTAAAACATGACATTAGCCTGGAAAAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: QRIRKESSTCKV*LKHDISLEKER
Trigger: TCTTTCCTTTTCCAGGCTAATGTCATGTTTTAACCAAACCTTGCACGTTGAGCTTTCTTTCCTAATGCGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp AAATGTCTGCCTAGCAGCACAGTTCAACTGGTGTTGTaGGGTCTGAAATTCTTAATAATTGACCAGATGGAG +
Preference number: 6 (lower is better)
Translates to: KCLPSSTVQLVL*GLKFLIIDQME
Trigger: CTCCATCTGGTCAATTATTAAGAATTTCAGACCCAACAACACCAGTTGAACTGTGCTGCTAGGCAGACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp AGATGTGGTTGTCAGTTAAAAGGTTCTGAATTTGGTTaGGGAAGGAAGGCAAGCAGCTCATTTAAACTGCCA +
Preference number: 6 (lower is better)
Translates to: RCGCQLKGSEFG*GRKASSSFKLP
Trigger: TGGCAGTTTAAATGAGCTGCTTGCCTTCCTTCCCAAACCAAATTCAGAACCTTTTAACTGACAACCACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp GTTCTTCAACCACCATGGATTTCGGAAGCTTGTCTCTaGGAGCCAATGACATTTTATCATCTCTACATGTGT +
Preference number: 6 (lower is better)
Translates to: VLQPPWISEACL*EPMTFYHLYMC
Trigger: ACACATGTAGAGATGATAAAATGTCATTGGCTCCAAGAGACAAGCTTCCGAAATCCATGGTGGTTGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS CAA 72 bp CTCCTGGGCTCCTCGGATACTCAAAACATATTATTATaGCCTCCTGTTGAGATAAACATCTCCCAGATACAT +
Preference number: 6 (lower is better)
Translates to: LLGSSDTQNILL*PPVEINISQIH
Trigger: ATGTATCTGGGAGATGTTTATCTCAACAGGAGGCAATAATAATATGTTTTGAGTATCCGAGGAGCCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS CAA 90 bp CACATTTTAAGATGTGGTTGTCAGTTAAAAGGTTCTGAATTTGGTTaGGGAAGGAAGGCAAGCAGCTCATTTAAACTGCCACCCAGACAT +
Preference number: 6 (lower is better)
Translates to: HILRCGCQLKGSEFG*GRKASSSFKLPPRH
Trigger: ATGTCTGGGTGGCAGTTTAAATGAGCTGCTTGCCTTCCTTCCCAAACCAAATTCAGAACCTTTTAACTGACAACCACATCTTAAAATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp GGTGATACAGAAGAAAGACTTAGATTCCATTCAGATGATCTGGTTTaGAAAACCAGTTCTACCACCACCCAAGTAATCTTAGGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: GDTEERLRFHSDDLV*KTSSTTTQVILGKA
Trigger: TGCCTTGCCTAAGATTACTTGGGTGGTGGTAGAACTGGTTTTCAAAACCAGATCATCTGAATGGAATCTAAGTCTTTCTTCTGTATCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp CTAAGCATAAGGGCTTGCAAAAGCTTAATATTATTCTaGAGTCATCGTGCAGCTCAGCGCATTAGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LSIRACKSLILF*SHRAAQRIRKE
Trigger: TTCTTTCCTAATGCGCTGAGCTGCACGATGACTTCAGAATAATATTAAGCTTTTGCAAGCCCTTATGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS TCA 72 bp GCTGGTGATGGAAATGTGGAAATGCACAGAGTTCCCTaGAAAATAGGCACAATGGAAATAAACAGTACTAGA +
Preference number: 6 (lower is better)
Translates to: AGDGNVEMHRVP*KIGTMEINSTR
Trigger: TCTAGTACTGTTTATTTCCATTGTGCCTATTTTTCAGGGAACTCTGTGCATTTCCACATTTCCATCACCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474046.1
CDS TCA 72 bp CTGGTCAAAGAAGAATCCTGGTCTGCCTCAAATACCTaGGATCCCTATTTTCAGTGTATTATGGCATCTAAA +
Preference number: 6 (lower is better)
Translates to: LVKEESWSASNT*DPYFQCIMASK
Trigger: TTTAGATGCCATAATACACTGAAAATAGGGATCTCAGGTATTTGAGGCAGACCAGGATTCTTCTTTGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp CACCATGGATTTCGGAAGCTTGTCTCTTGGAGCCAATaGCATTTTATCATCTCTACATGTGTTCTTATCTTC +
Preference number: 6 (lower is better)
Translates to: HHGFRKLVSWSQ*HFIISTCVLIF
Trigger: GAAGATAAGAACACATGTAGAGATGATAAAATGTCATTGGCTCCAAGAGACAAGCTTCCGAAATCCATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS GCA 72 bp TGGGCCAAATATTCTTTATTGTGGGAGATTATCTTATaGATTGTAGGCTGGTTAGCCCTACAATGGTTATCC +
Preference number: 6 (lower is better)
Translates to: WAKYSLLWEIIL*IVGWLALQWLS
Trigger: GGATAACCATTGTAGGGCTAACCAGCCTACAATGCATAAGATAATCTCCCACAATAAAGAATATTTGGCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp TGCATATTGTTTATGTTATGTGAAGCCATACCTTACTaGAAGTTGTCAATAGAACTGCTTCCCCTTGGCAAC +
Preference number: 6 (lower is better)
Translates to: CILFMLCEAIPY*KLSIELLPLGN
Trigger: GTTGCCAAGGGGAAGCAGTTCTATTGACAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAATATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp AATGTTACAGAGTCCCCTCAACAAGAAGGCATGGAATaGTGTTCAAAACTTGACAATTCTGCTTTCTCTGAT +
Preference number: 6 (lower is better)
Translates to: NVTESPQQEGME*CSKLDNSAFSD
Trigger: ATCAGAGAAAGCAGAATTGTCAAGTTTTGAACAGCATTCCATGCCTTCTTGTTGAGGGGACTCTGTAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605467.1
CDS CCA 72 bp TTCGTAATGTTACAGAGTCCCCTCAACAAGAAGGCATaGAATGCTGTTCAAAACTTGACAATTCTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: FVMLQSPLNKKA*NAVQNLTILLS
Trigger: AGAAAGCAGAATTGTCAAGTTTTGAACAGCATTCCATGCCTTCTTGTTGAGGGGACTCTGTAACATTACGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000605467.1
CDS CAA 72 bp TTGTTTATGTTATGTGAAGCCATACCTTACTGCAAGTaGTCAATAGAACTGCTTCCCCTTGGCAACTTCAAG +
Preference number: 6 (lower is better)
Translates to: LFMLCEAIPYCK*SIELLPLGNFK
Trigger: CTTGAAGTTGCCAAGGGGAAGCAGTTCTATTGACAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp CTCTTTGATGTTCTTCAACCACCATGGATTTCGGAAGCTTGTCTCTaGGAGCCAATGACATTTTATCATCTCTACATGTGTTCTTATCTT +
Preference number: 6 (lower is better)
Translates to: LFDVLQPPWISEACL*EPMTFYHLYMCSYL
Trigger: AAGATAAGAACACATGTAGAGATGATAAAATGTCATTGGCTCCAAGAGACAAGCTTCCGAAATCCATGGTGGTTGAAGAACATCAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560641.5
CDS TCA 72 bp CCAATAGATGCCAATAACAACCTCCCTTCAAAATTGTaGCAACCAAAGATAGCTCCAGATAGTACCAAATGT +
Preference number: 6 (lower is better)
Translates to: PIDANNNLPSKL*QPKIAPDSTKC
Trigger: ACATTTGGTACTATCTGGAGCTATCTTTGGTTGTCACAATTTTGAAGGGAGGTTGTTATTGGCATCTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp CCATTGACTAAAATAGTGCTAGAGGAAGAACTTTCATaGTTGAATTTGCTGTTGTCCTTGACACAAACACAC +
Preference number: 6 (lower is better)
Translates to: PLTKIVLEEELS*LNLLLSLTQTH
Trigger: GTGTGTTTGTGTCAAGGACAACAGCAAATTCAACCATGAAAGTTCTTCCTCTAGCACTATTTTAGTCAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp TTGCTACTGACATTTTGGGCCAAATATTCTTTATTGTaGGAGATTATCTTATGCATTGTAGGCTGGTTAGCC +
Preference number: 6 (lower is better)
Translates to: LLLTFWAKYSLL*EIILCIVGWLA
Trigger: GGCTAACCAGCCTACAATGCATAAGATAATCTCCCACAATAAAGAATATTTGGCCCAAAATGTCAGTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp TTGACTAAAATAGTGCTAGAGGAAGAACTTTCATGGTaGAATTTGCTGTTGTCCTTGACACAAACACACAGC +
Preference number: 6 (lower is better)
Translates to: LTKIVLEEELSW*NLLLSLTQTHS
Trigger: GCTGTGTGTTTGTGTCAAGGACAACAGCAAATTCAACCATGAAAGTTCTTCCTCTAGCACTATTTTAGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp CAGGGGTATTACAAGATTATGTATATGGGCTTGCCATaGACTAAAATAGTGCTAGAGGAAGAACTTTCATGG +
Preference number: 6 (lower is better)
Translates to: QGYYKIMYMGLP*TKIVLEEELSW
Trigger: CCATGAAAGTTCTTCCTCTAGCACTATTTTAGTCAATGGCAAGCCCATATACATAATCTTGTAATACCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp GAGAATGGACTAATACAGGGGTATTACAAGATTATGTATATGGGCTaGCCATTGACTAAAATAGTGCTAGAGGAAGAACTTTCATGGTTG +
Preference number: 6 (lower is better)
Translates to: ENGLIQGYYKIMYMG*PLTKIVLEEELSWL
Trigger: CAACCATGAAAGTTCTTCCTCTAGCACTATTTTAGTCAATGGCAAGCCCATATACATAATCTTGTAATACCCCTGTATTAGTCCATTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp CTGGTTAGTAGCATGAAGAACAGAGCAAGCAATAAAGGGTGCATATaGTTTATGTTATGTGAAGCCATACCTTACTGCAAGTTGTCAATA +
Preference number: 6 (lower is better)
Translates to: LVSSMKNRASNKGCI*FMLCEAIPYCKLSI
Trigger: TATTGACAACTTGCAGTAAGGTATGGCTTCACATAACATAAACAATATGCACCCTTTATTGCTTGCTCTGTTCTTCATGCTACTAACCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp ATAATAAAAGTGAAAGAATATGGCCTGTTAGAAGAATCGCTGGGCTaGAAATCAGAGAGTCCGGGTCAAAGTCTTATTTTAGACACTTTC +
Preference number: 6 (lower is better)
Translates to: IIKVKEYGLLEESLG*KSESPGQSLILDTF
Trigger: GAAAGTGTCTAAAATAAGACTTTGACCCGGACTCTCTGATTTCAAGCCCAGCGATTCTTCTAACAGGCCATATTCTTTCACTTTTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS GCA 72 bp CCCTTTTTACTAGATGTAAGCTTAAATTATGTCCCATaGATGCTTGCTTTTCCATTTCCCTTTGTGAATTCC +
Preference number: 6 (lower is better)
Translates to: PFLLDVSLNYVP*MLAFPFPFVNS
Trigger: GGAATTCACAAAGGGAAATGGAAAAGCAAGCATGCATGGGACATAATTTAAGCTTACATCTAGTAAAAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp TGTTGCGTAAGTCAAGATAATAAAAGTGAAAGAATATaGCCTGTTAGAAGAATCGCTGGGCTTGAAATCAGA +
Preference number: 6 (lower is better)
Translates to: CCVSQDNKSERI*PVRRIAGLEIR
Trigger: TCTGATTTCAAGCCCAGCGATTCTTCTAACAGGCCATATTCTTTCACTTTTATTATCTTGACTTACGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CCA 72 bp AGCACATCTCAAAAGCAAAATTTGACAGTAAGTTTCTaGACCATGTTCAGCAGTCAGTCCTTAACTAGTTTA +
Preference number: 6 (lower is better)
Translates to: STSQKQNLTVSF*TMFSSQSLTSL
Trigger: TAAACTAGTTAAGGACTGACTGCTGAACATGGTCCAGAAACTTACTGTCAAATTTTGCTTTTGAGATGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CAA 90 bp ACAAAGGGGTTCCTGTGCAGATTATTTCCAACAACTTACGCACAATaGGAAGGCTTAGCTCAAATTTTCCATAATAATTTACTTTGTGCT +
Preference number: 6 (lower is better)
Translates to: TKGFLCRLFPTTYAQ*EGLAQIFHNNLLCA
Trigger: AGCACAAAGTAAATTATTATGGAAAATTTGAGCTAAGCCTTCCAATTGTGCGTAAGTTGTTGGAAATAATCTGCACAGGAACCCCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 90 bp TCTTTTCATATTTATTATCCTCAGGAAGTAACTTCTTCATGTATCTaGATGCTCAGAGAGGTCATTTGGGTCTATGAATCTAGAACACTC +
Preference number: 6 (lower is better)
Translates to: SFHIYYPQEVTSSCI*MLREVIWVYESRTL
Trigger: GAGTGTTCTAGATTCATAGACCCAAATGACCTCTCTGAGCATCAAGATACATGAAGAAGTTACTTCCTGAGGATAATAAATATGAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp TCTCTCTCCAATTCAGAACAACCAGAAGGGCCTGTCTaGATTAGTAATGCATTAAAGAAAAGTAGGATTATT +
Preference number: 6 (lower is better)
Translates to: SLSNSEQPEGPV*ISNALKKSRII
Trigger: AATAATCCTACTTTTCTTTAATGCATTACTAATTCAGACAGGCCCTTCTGGTTGTTCTGAATTGGAGAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS CAA 72 bp TTGTTGCTACTGACATTTTGGGCCAAATATTCTTTATaGTGGGAGATTATCTTATGCATTGTAGGCTGGTTA +
Preference number: 6 (lower is better)
Translates to: LLLLTFWAKYSL*WEIILCIVGWL
Trigger: TAACCAGCCTACAATGCATAAGATAATCTCCCACAATAAAGAATATTTGGCCCAAAATGTCAGTAGCAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp ATTTATTATCCTCAGGAAGTAACTTCTTCATGTATCTaGATGCTCAGAGAGGTCATTTGGGTCTATGAATCT +
Preference number: 6 (lower is better)
Translates to: IYYPQEVTSSCI*MLREVIWVYES
Trigger: AGATTCATAGACCCAAATGACCTCTCTGAGCATCAAGATACATGAAGAAGTTACTTCCTGAGGATAATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498497.2
CDS TCA 72 bp AATAAAAATAACATCAACAGAGTCTGGTTAGTAGCATaGAGAACAGAGCAAGCAATAAAGGGTGCATATTGT +
Preference number: 6 (lower is better)
Translates to: NKNNINRVWLVA*RTEQAIKGAYC
Trigger: ACAATATGCACCCTTTATTGCTTGCTCTGTTCTTCATGCTACTAACCAGACTCTGTTGATGTTATTTTTATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS GCA 72 bp GTTTTGCATTATGATAACCTTTGCAGGAGTGTTGAGTaGATTTTTGCTAATGTTGACAGAATTGTACTTCTT +
Preference number: 6 (lower is better)
Translates to: VLHYDNLCRSVE*IFANVDRIVLL
Trigger: AAGAAGTACAATTCTGTCAACATTAGCAAAAATGCACTCAACACTCCTGCAAAGGTTATCATAATGCAAAAC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CCA 72 bp GCTGCTAATAATAATAATAGTAATAATAATAATAAGTaGGCCTCAAGAAGGGCCATTAGCCATCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: AANNNNSNNNNK*ASRRAISHLLF
Trigger: GAAAAGCAGATGGCTAATGGCCCTTCTTGAGGCCCACTTATTATTATTATTACTATTATTATTATTAGCAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp ATTATGATAACCTTTGCAGGAGTGTTGAGTGCATTTTaGCTAATGTTGACAGAATTGTACTTCTTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: IMITFAGVLSAF*LMLTELYFFQR
Trigger: TCTTTGGAAGAAGTACAATTCTGTCAACATTAGCAAAAATGCACTCAACACTCCTGCAAAGGTTATCATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465089.2
CDS CAA 72 bp ATATCGTTTTGCATTATGATAACCTTTGCAGGAGTGTaGAGTGCATTTTTGCTAATGTTGACAGAATTGTAC +
Preference number: 6 (lower is better)
Translates to: ISFCIMITFAGV*SAFLLMLTELY
Trigger: GTACAATTCTGTCAACATTAGCAAAAATGCACTCAACACTCCTGCAAAGGTTATCATAATGCAAAACGATAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465089.2