Pregenerated sensors for PBOV1 (Homo sapiens)
Ensembl gene IDs: ENSG00000254440Ensembl transcript IDs: ENST00000527246.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTaGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTTGAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: CAFKLCISTVVSALV*EQETRQRKKDCLSP Trigger: GGGACTCAAACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CCA 90 bp | TGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGTTCTaGTATTACAAAGTGGAAGGGAGTGTGCTTTTAAATTATGTATCA | + |
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Preference number: 1 (lower is better) Translates to: CMAGSPKLQGVQLEF*YYKVEGSVLLNYVS Trigger: TGATACATAATTTAAAAGCACACTCCCTTCCACTTTGTAATACCAGAACTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR GCA 90 bp | GCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTCTATAGATCCATTTTTATCCCTCTGGTaGCTAGCGGAGCATCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: AHINAEALITYSGCSIDPFLSLW*LAEHLA Trigger: TGCCAGATGCTCCGCTAGGCACCAGAGGGATAAAAA...TGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTGCTGCTTATAACAGGGAGAAATCTCTTCTTAGCCTGAAGCCATTGAGAATGTGTCAGGCACTGTaGTGGGCACAGAAGATCCCA | + |
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Preference number: 2 (lower is better) Translates to: CLAAYNREKSLLSLKPLRMCQAL*WAQKIP Trigger: TGGGATCTTCTGTGCCCAGCACAGTGCCTGACACAT...TCTCAATGGCTTCAGGCTAAGAAGAGATTTCTCCCTGTTATAAGCAGCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACTTGTTTTTATCCCTCTaGTGCCTAGCGGAGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDLFLSL*CLAEHL Trigger: CAGATGCTCCGCTAGGCACCAGAGGGATAAAAACAA...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTGCCTTGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTTGAGCTCTTGACTCAGGCATaGCTTGAACATTTCACTAGT | + |
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Preference number: 2 (lower is better) Translates to: QCLGLGARNTTKEERLFELLTQA*LEHFTS Trigger: ACTAGTGAAATGTTCAAGTCATGCCTGAGTCAAGAG...CTCAAACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR TCA 90 bp | TCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTGTCGTTGTTGGAGGTTaGTCTAACAAGTTTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: SSVPWSGSKKHDKGRKTVVVVGG*SNKFAN Trigger: GTTTGCAAACTTGTTAGATCAACCTCCAACAACGAC...AACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCTGTCTCCTCAACTCTTaGCTCAGGCATGACTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: PSLFLLIRLSDENLFLLCCLLNS*LRHDLN Trigger: GTTCAAGTCATGCCTGAGTCAAGAGTTGAGGAGACA...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | ACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGTTCTGGGGAGCATCTGGCACATaGCTTACTAATTGCTCGTTA | + |
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Preference number: 2 (lower is better) Translates to: TICMAGSPKLQGVQLEFWGASGT*LTNCSL Trigger: TAACGAGCAATTAGTAAGCCATGTGCCAGATGCTCC...CCAGAACTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACGTTCTGCTAAGTAAATaGTTCTCAAACAGCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDVLLSK*FSNSLP Trigger: GGGAAGGCTGTTTGAGAACCATTTACTTAGCAGAAC...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CAA 90 bp | AGGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTaGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RECAFKLCISTVVSA*VWEQETRQRKKDCL Trigger: CAAACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGCCTCATCACTTACTCTaGATGTTCTATAGATCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GSVLLNYVSVLSSVPWSGPHHLL*MFYRSK Trigger: TTTGGATCTATAGAACATCCAGAGTAAGTGATGAGG...CCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGTTTGAGAGTGAAATaGCTAATTTGTCTTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GSVLLNYVSVLSSVPWSGSLRVK*LICLAA Trigger: AGCAGCAAGACAAATTAGCCATTTCACTCTCAAACT...CCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGAAATTGAAGTTGGAATaGTTCAGTTACTTGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EFTICMAGSPKLQGVQLEKLKLE*FSYLAG Trigger: CCCAGCCAAGTAACTGAACCATTCCAACTTCAATTT...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTGCTGCTTATAACAGGGAGAAATCTCTTCTTAGCCTGAAGCCATTGAGAAACACAATCTGTGTTTaGAGGCCAATGATAGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CLAAYNREKSLLSLKPLRNTICV*RPMIES Trigger: TGACTCTATCATTGGCCTCCAAACACAGATTGTGTT...TCTCAATGGCTTCAGGCTAAGAAGAGATTTCTCCCTGTTATAAGCAGCAAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CAA 90 bp | AATGGCAGAGTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTaGATGTTCTTAACTCGGGGCATTTGGTCTTCTAGAGTTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: NGRVLHLGSFFRWLV*MFLTRGIWSSRVPF Trigger: AAAAGGAACTCTAGAAGACCAAATGCCCCGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGACTCTGCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTTGATGTTCTTAACTCGAATGGTTCAGTTACTTaGCTGGGCTTAAACAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SLTLGKFLQMVSFDVLNSNGSVT*LGLNSH Trigger: ATGACTGTTTAAGCCCAGCCAAGTAACTGAACCATT...CGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAGTGGAAGGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTAAAATATTTAACTCCTaGATGTGTCGTTGTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LQSGRECAFKLCISTVVSKIFNS*MCRCWR Trigger: CCTCCAACAACGACACATTCAGGAGTTAAATATTTT...ACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCCTTCCACTTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CAA 90 bp | CAAATTCTTTTCATAAGTAAATTGAAGTTGGAATGGTTCAGTTACTaGGCTGGGCTTAAACAGTCATTGGTAGCAGAATTGCCTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: QILFISKLKLEWFSY*AGLKQSLVAELPFQ Trigger: TTGAAAAGGCAATTCTGCTACCAATGACTGTTTAAGCCCAGCCAAGTAACTGAACCATTCCAACTTCAATTTACTTATGAAAAGAATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CAA 90 bp | TCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTGGGCTTAAACAGTCATaGGTAGCAGAATTGCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SSVPWSGSKKHDKGRKTVGLKQS*VAELPF Trigger: AAAAGGCAATTCTGCTACCAATGACTGTTTAAGCCC...AACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CAA 90 bp | ATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACACTGAATGTGTCGTTGTaGGAGGTTGATCTAACAAGT | + |
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Preference number: 3 (lower is better) Translates to: IMYQYCRQCLGLGARNTTLNVSL*EVDLTS Trigger: ACTTGTTAGATCAACCTCCAACAACGACACATTCAG...TGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTGCTGCTTATAACAGGGAGAAATCTCTTCTTAGCCTGAAGCCATTGAGACTCCTGAATGTGTCGTaGTTGGAGGTTGATCTAACA | + |
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Preference number: 3 (lower is better) Translates to: CLAAYNREKSLLSLKPLRLLNVS*LEVDLT Trigger: TGTTAGATCAACCTCCAACAACGACACATTCAGGAG...TCTCAATGGCTTCAGGCTAAGAAGAGATTTCTCCCTGTTATAAGCAGCAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGCTTAGCCTGAAGCCATaGAGACCCTTCAGAAGATTT | + |
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Preference number: 3 (lower is better) Translates to: EFTICMAGSPKLQGVQLELSLKP*RPFRRF Trigger: AAATCTTCTGAAGGGTCTCAATGGCTTCAGGCTAAG...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR-3UTR CAA 90 bp | ACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGTTCTGGTTCAGATGGTTAGTTTaGATGTTCTTAACTCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: TICMAGSPKLQGVQLEFWFRWLV*MFLTRG Trigger: GCCCCGAGTTAAGAACATCAAAACTAACCATCTGAA...CCAGAACTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CCA 72 bp | AGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTaGATGTTCTATAGATCCAAACAGAATGGGAAAGTT | + |
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Preference number: 3 (lower is better) Translates to: SAYKCRGPHHLL*MFYRSKQNGKV Trigger: AACTTTCCCATTCTGTTTGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CCA 72 bp | CTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTTaGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LLNYVSVLSSVP*SGSKKHDKGRK Trigger: CTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR TCA 72 bp | CGCCTAGTAAACATCTATAGAAAATACACAGATGAGTaGATCGTGGACAGAGTTTACTATTTGTATGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: RLVNIYRKYTDE*IVDRVYYLYGW Trigger: CCAGCCATACAAATAGTAAACTCTGTCCACGATTCACTCATCTGTGTATTTTCTATAGATGTTTACTAGGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR GCA 72 bp | CTTTTCTCACATAATCTTAATTTAAGCGCATATAAATaGAGAGGCCCTCATCACTTACTCTGGATGTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LFSHNLNLSAYK*RGPHHLLWMFY Trigger: ATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATTATGTGAGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACACCCACCTCCCAAAGTaGTGGGATTACAGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDTHLPK*WDYRRE Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGGTGGGT...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACATGTGTCAGGCACTGTaGTGGGCACAGAAGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDMCQAL*WAQKIP Trigger: TGGGATCTTCTGTGCCCAGCACAGTGCCTGACACAT...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | GGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGCAGTACTGTCGTCAGTaGCTTGGTCTGGGAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSVLLNYVSVLSSVPWSGQYCRQ*LGLGAR Trigger: TCTTGCTCCCAGACCAAGGCACTGACGACAGTACTG...CCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | ATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACATTTTTATCCCTCTGGTaGCTAGCGGAGCATCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: IMYQYCRQCLGLGARNTTFLSLW*LAEHLA Trigger: TGCCAGATGCTCCGCTAGGCACCAGAGGGATAAAAA...TGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | ATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACAGTCAGTGCCTTGGTCTaGGAGCAAGAAACACGACAA | + |
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Preference number: 4 (lower is better) Translates to: IMYQYCRQCLGLGARNTTVSALV*EQETRQ Trigger: TTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGAC...TGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACTTTCTGGAGCTAGAATaGCTGGTAGCCTTGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDFLELE*LVALGS Trigger: ACTTCCCAAGGCTACCAGGCATTCTAGCTCCAGAAA...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCGTGTCTGCAAGGGTGTaGGAATTGCATGGTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: PSLFLLIRLSDENLFLLCVSARV*ELHGVT Trigger: AGTCACACCATGCAATTCTCACACCCTTGCAGACAC...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | ATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACACTTTACCCTTTGATATaGCTGCCTTCAGCAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: IMYQYCRQCLGLGARNTTLYPLI*LPSADG Trigger: ACCATCTGCTGAAGGCAGTCATATCAAAGGGTAAAG...TGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | CAGTGCCTTGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTTGAGGCAGAGTCTTACACTTaGGAAGTTTCTTCAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: QCLGLGARNTTKEERLFEAESYT*EVSSDG Trigger: ACCATCTGAAGAAACTTCCCAAGTGTAAGACTCTGC...CTCAAACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGTGTCTCCTCAACTCTTaGCTCAGGCATGACTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLECLLNS*LRHDLN Trigger: GTTCAAGTCATGCCTGAGTCAAGAGTTGAGGAGACA...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | CATAATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGCTGTCGTCAGTGCCTTaGTCTGGGAGCAAGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: HNLNLSAYKCRGPHHLLWLSSVP*SGSKKH Trigger: GTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAG...CCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGATGGTCAAGTGTGTCTaGAAGGGTGTGAGAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLEMVKCV*KGVRIA Trigger: TGCAATTCTCACACCCTTGCAGACACACTTGACCAT...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACAATGGTTCAGTTACTTaGCTGGGCTTAAACAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDNGSVT*LGLNSH Trigger: ATGACTGTTTAAGCCCAGCCAAGTAACTGAACCATT...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | TGTCTTGCTGCTTATAACAGGGAGAAATCTCTTCTTAGCCTGAAGCCATTGAGAGGAGCATCTGGCACATaGCTTACTAATTGCTCGTTA | + |
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Preference number: 4 (lower is better) Translates to: CLAAYNREKSLLSLKPLRGASGT*LTNCSL Trigger: TAACGAGCAATTAGTAAGCCATGTGCCAGATGCTCC...TCTCAATGGCTTCAGGCTAAGAAGAGATTTCTCCCTGTTATAAGCAGCAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACTTAACTCGGGGCATTTaGTCTTCTAGAGTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDLTRGI*SSRVPF Trigger: AAAAGGAACTCTAGAAGACCAAATGCCCCGAGTTAA...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | ATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACAGTCCAATTAGAGTTCTaGTATTACAAAGTGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: IMYQYCRQCLGLGARNTTVQLEF*YYKVEG Trigger: CCCTTCCACTTTGTAATACCAGAACTCTAATTGGAC...TGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCCTCTTGACTCAGGCATaGCTTGAACATTTCACTAGT | + |
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Preference number: 4 (lower is better) Translates to: PSLFLLIRLSDENLFLLCLLTQA*LEHFTS Trigger: ACTAGTGAAATGTTCAAGTCATGCCTGAGTCAAGAG...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCTCTTTCTTTACCCTTTaGTATGACTGCCTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLFLLIRLSDENLFLLCSFFTL*YDCLQQ Trigger: CTGCTGAAGGCAGTCATATCAAAGGGTAAAGAAAGA...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTGTTTTTATCCCTCTaGTGCCTAGCGGAGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: NLNLSAYKCRGPHHLLWMLFLSL*CLAEHL Trigger: CAGATGCTCCGCTAGGCACCAGAGGGATAAAAACAA...CATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGGTTCTGCTAAGTAAATaGTTCTCAAACAGCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLEVLLSK*FSNSLP Trigger: GGGAAGGCTGTTTGAGAACCATTTACTTAGCAGAAC...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AATTATGTATCAGTACTGTCGTCAGTGCCTTGGTCTGGGAGCAAGAAACACGACCAGATGAGTGAATCGTaGACAGAGTTTACTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NYVSVLSSVPWSGSKKHDQMSES*TEFTIC Trigger: ACAAATAGTAAACTCTGTCCACGATTCACTCATCTG...GTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CAA 72 bp | GCTTTTAAATTATGTATCAGTACTGTCGTCAGTGCCTaGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AFKLCISTVVSA*VWEQETRQRKK Trigger: TTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGATACATAATTTAAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGGAGAATTGCATGGTGTaGCTGTTCTATGGAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLEENCMV*LFYGII Trigger: GATTATTCCATAGAACAGTCACACCATGCAATTCTC...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | GCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTCTATAGATCCAAAAATATTTAACTCCTaGATGTGTCGTTGTTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHINAEALITYSGCSIDPKIFNS*MCRCWR Trigger: CCTCCAACAACGACACATTCAGGAGTTAAATATTTT...TGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGTTAAGCGCATATAAATaGAGAGGCCCTCATCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLELSAYK*RGPHHL Trigger: TAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAA...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | GCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTCTATAGATCCAAGTTTGAGAGTGAAATaGCTAATTTGTCTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AHINAEALITYSGCSIDPSLRVK*LICLAA Trigger: AGCAGCAAGACAAATTAGCCATTTCACTCTCAAACT...TGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCCTATGGAATAATCAATaGACTCTGTTGCCTTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLFLLIRLSDENLFLLCLWNNQ*TLLPFD Trigger: GTCAAAAGGCAACAGAGTTCATTGATTATTCCATAG...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | AATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGGTCGTTGTTGGAGGTTaGTCTAACAAGTTTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLNLSAYKCRGPHHLLWMVVVGG*SNKFAN Trigger: GTTTGCAAACTTGTTAGATCAACCTCCAACAACGAC...CATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR GCA 90 bp | TTACAAAGTGGAAGGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTTTTCTGGAAAGGCTTTaGAGCAGGGCTGAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQSGRECAFKLCISTVVSFLERL*SRAESL Trigger: TAAACTCTCAGCCCTGCTGCAAAGCCTTTCCAGAAA...ACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCCTTCCACTTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGCCTCATCACTTACTCTaGATGTTCTATAGATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EFTICMAGSPKLQGVQLEPHHLL*MFYRSK Trigger: TTTGGATCTATAGAACATCCAGAGTAAGTGATGAGG...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| 3UTR CAA 72 bp | GTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTaGATGTTCTTAACTCGGGGCATTTGGTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLHLGSFFRWLV*MFLTRGIWSSR Trigger: TCTAGAAGACCAAATGCCCCGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGATATCCTCATATTTCTaGTTCCTTAAGAAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLNLSAYKCRGPHHLLWMISSYF*FLKKAL Trigger: GAGGGCCTTCTTAAGGAACCAGAAATATGAGGATAT...CATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AGTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTTGATGTTCTTAACTCGGGTGTGAGAATTGCATaGTGTGACTGTTCTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTLGKFLQMVSFDVLNSGVRIA*CDCSME Trigger: TTCCATAGAACAGTCACACCATGCAATTCTCACACC...CGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | CATAATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGAAATTGAAGTTGGAATaGTTCAGTTACTTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNLNLSAYKCRGPHHLLWKLKLE*FSYLAG Trigger: CCCAGCCAAGTAACTGAACCATTCCAACTTCAATTT...CCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | AGTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTTGATGTTCTTAACTCGAAATACACAGATGAGTaGATCGTGGACAGAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTLGKFLQMVSFDVLNSKYTDE*IVDRVY Trigger: GTAAACTCTGTCCACGATTCACTCATCTGTGTATTT...CGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | TTACAAAGTGGAAGGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTAACACAATCTGTGTTTaGAGGCCAATGATAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSGRECAFKLCISTVVSNTICV*RPMIES Trigger: TGACTCTATCATTGGCCTCCAAACACAGATTGTGTT...ACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCCTTCCACTTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR TCA 90 bp | TTACAAAGTGGAAGGGAGTGTGCTTTTAAATTATGTATCAGTACTGTCGTCAGTACTGCAAAGTCAATGTaGATAATATGGCTTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSGRECAFKLCISTVVSTAKSM*IIWLLK Trigger: CTTCAGAAGCCATATTATTCACATTGACTTTGCAGT...ACTGACGACAGTACTGATACATAATTTAAAAGCACACTCCCTTCCACTTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CCA 90 bp | AGTCTTACACTTGGGAAGTTTCTTCAGATGGTTAGTTTTGATGTTCTTAACTCGAGTTTACTATTTGTATaGCTGGTAGTCCTAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTLGKFLQMVSFDVLNSSLLFV*LVVLSF Trigger: GAAGCTTAGGACTACCAGCCATACAAATAGTAAACT...CGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGTAAGACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | CAGTGCCTTGGTCTGGGAGCAAGAAACACGACAAAGGAAGAAAGACTGTTTGAGCTTAGCCTGAAGCCATaGAGACCCTTCAGAAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: QCLGLGARNTTKEERLFELSLKP*RPFRRF Trigger: AAATCTTCTGAAGGGTCTCAATGGCTTCAGGCTAAG...CTCAAACAGTCTTTCTTCCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | ACACTTGGGAAGTTTCTTCAGATGGTTAGTTTTGATGTTCTTAACTCGGGGCATACTGTCGTCAGTGCCTaGGTCTGGGAGCAAGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TLGKFLQMVSFDVLNSGHTVVSA*VWEQET Trigger: TGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGT...ATGCCCCGAGTTAAGAACATCAAAACTAACCATCTGAAGAAACTTCCCAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | TGTCTTGCTGCTTATAACAGGGAGAAATCTCTTCTTAGCCTGAAGCCATTGAGAAGGAAGAAAGACTGTTaGAGTCCCCTCTCGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: CLAAYNREKSLLSLKPLRRKKDC*SPLSVM Trigger: CATTACCGAGAGGGGACTCAAACAGTCTTTCTTCCT...TCTCAATGGCTTCAGGCTAAGAAGAGATTTCTCCCTGTTATAAGCAGCAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS GCA 90 bp | ATACCTTGTAGCAGAATGGTAAGAGCACAGTTTCTGGAGCTAGAATaGCTGGTAGCCTTGGGAAGTTACTTAATCTGTGCCTCAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPCSRMVRAQFLELE*LVALGSYLICASIF Trigger: GAAAATTGAGGCACAGATTAAGTAACTTCCCAAGGCTACCAGGCATTCTAGCTCCAGAAACTGTGCTCTTACCATTCTGCTACAAGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | CCTTCCCTCTTCCTGCTCATAAGGTTGAGTGATGAGAATCTTTTTCTACTTTGCGAATGCCTGGTAGCCTaGGGAAGTTACTTAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLFLLIRLSDENLFLLCECLVA*GSYLIC Trigger: ACAGATTAAGTAACTTCCCAAGGCTACCAGGCATTC...GCAAAGTAGAAAAAGATTCTCATCACTCAACCTTATGAGCAGGAAGAGGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | GAGTTTACTATTTGTATGGCTGGTAGTCCTAAGCTTCAGGGTGTCCAATTAGAGCTCCTGAATGTGTCGTaGTTGGAGGTTGATCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: EFTICMAGSPKLQGVQLELLNVS*LEVDLT Trigger: TGTTAGATCAACCTCCAACAACGACACATTCAGGAG...CTCTAATTGGACACCCTGAAGCTTAGGACTACCAGCCATACAAATAGTAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | GCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTCTATAGATCCATTCAGATGGTTAGTTTaGATGTTCTTAACTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AHINAEALITYSGCSIDPFRWLV*MFLTRG Trigger: GCCCCGAGTTAAGAACATCAAAACTAACCATCTGAA...TGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | GCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGATGTTCTATAGATCCAATGAGGAACATTTCATaGAGGAACCTTTCATGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHINAEALITYSGCSIDPMRNIS*RNLSWS Trigger: TGACCATGAAAGGTTCCTCAATGAAATGTTCCTCAT...TGGATCTATAGAACATCCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS TCA 90 bp | TTTCATGGTCAAGTGTGTCTGCAAGGGTGTGAGAATTGCATGGTGTaGCTGTTCTATGGAATAATCAATGAACTCTGTTGCCTTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: FHGQVCLQGCENCMV*LFYGIINELCCLLT Trigger: AGTCAAAAGGCAACAGAGTTCATTGATTATTCCATAGAACAGTCACACCATGCAATTCTCACACCCTTGCAGACACACTTGACCATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS TCA 90 bp | GACAGCATTCCAGACCTAGGGTCTGAGTTAACTGCAAAGTCAATGTaGATAATATGGCTTCTGAAGATAATGAGGAACATTTCATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSIPDLGSELTAKSM*IIWLLKIMRNISLR Trigger: CCTCAATGAAATGTTCCTCATTATCTTCAGAAGCCATATTATTCACATTGACTTTGCAGTTAACTCAGACCCTAGGTCTGGAATGCTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | CATAATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGGGGCTTAAACAGTCATaGGTAGCAGAATTGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HNLNLSAYKCRGPHHLLWGLKQS*VAELPF Trigger: AAAAGGCAATTCTGCTACCAATGACTGTTTAAGCCC...CCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS-3UTR CAA 90 bp | CATAATCTTAATTTAAGCGCATATAAATGCAGAGGCCCTCATCACTTACTCTGGCTGAATGTGTCGTTGTaGGAGGTTGATCTAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HNLNLSAYKCRGPHHLLWLNVSL*EVDLTS Trigger: ACTTGTTAGATCAACCTCCAACAACGACACATTCAG...CCAGAGTAAGTGATGAGGGCCTCTGCATTTATATGCGCTTAAATTAAGATTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS GCA 72 bp | AGCAGAATGGTAAGAGCACAGTTTCTGGAGCTAGAATaGCTGGTAGCCTTGGGAAGTTACTTAATCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRMVRAQFLELE*LVALGSYLICA Trigger: GGCACAGATTAAGTAACTTCCCAAGGCTACCAGGCATTCTAGCTCCAGAAACTGTGCTCTTACCATTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS GCA 72 bp | CATTTCATTGAGGAACCTTTCATGGTCAAGTGTGTCTaGAAGGGTGTGAGAATTGCATGGTGTGACTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HFIEEPFMVKCV*KGVRIAWCDCS Trigger: AGAACAGTCACACCATGCAATTCTCACACCCTTGCAGACACACTTGACCATGAAAGGTTCCTCAATGAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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| CDS TCA 72 bp | CAAGTGTGTCTGCAAGGGTGTGAGAATTGCATGGTGTaGCTGTTCTATGGAATAATCAATGAACTCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QVCLQGCENCMV*LFYGIINELCC Trigger: GCAACAGAGTTCATTGATTATTCCATAGAACAGTCACACCATGCAATTCTCACACCCTTGCAGACACACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527246.3 |
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