RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PBLD (Homo sapiens)

Ensembl gene IDs: ENSG00000108187

Ensembl transcript IDs: ENST00000277795.8, ENST00000309049.8, ENST00000336578.5, ENST00000358769.7, ENST00000468798.5, ENST00000478192.1, ENST00000495025.2

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCATTTTAATGGCTGCAAAATCAGGTACTCATTTAAGCTCAAATaGTTTAGTATCACTCCTCAGAAATGTATTCCTCCTTCTCTTGAT +
Preference number: 1 (lower is better)
Translates to: THFNGCKIRYSFKLK*FSITPQKCIPPSLD
Trigger: ATCAAGAGAAGGAGGAATACATTTCTGAGGAGTGATACTAAACCATTTGAGCTTAAATGAGTACCTGATTTTGCAGCCATTAAAATGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCCATGTTGGCCAGGCTaGTGTCGAACCCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKPCWPG*CRTPDL
Trigger: GAGGTCAGGGGTTCGACACCAGCCTGGCCAACATGG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGAGGTTTCACCATGTTaGCCAGGCTGGTGTCGAACC +
Preference number: 2 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLEVSPC*PGWCRT
Trigger: GGTTCGACACCAGCCTGGCCAACATGGTGAAACCTC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCAGGCTGGAGTGCAGTaGTGTGATCTCTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLQAGVQ*CDLCSL
Trigger: CAGTGAGCAGAGATCACACCACTGCACTCCAGCCTG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGCTCACTGCAACTTCTaGCTCCTGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLAHCNF*LLGSSD
Trigger: ATCGCTTGAACCCAGGAGGCAGAAGTTGCAGTGAGC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGTGATCTCTGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLVISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCAGAGATCAC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTCAAGCGATTCTCCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKSSDSP*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGGAGAATCGCTTGA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGCTCACTGCAACTTCTaGCTCCTGGGTTCAAGCGAT +
Preference number: 2 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKAHCNF*LLGSSD
Trigger: ATCGCTTGAACCCAGGAGGCAGAAGTTGCAGTGAGC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGCAGAAAATACTTGGTaGTTAGAGACAGCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKAENTW*LETAAS
Trigger: TGACGCTGCTGTCTCTAACCACCAAGTATTTTCTGC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGACTACTACGCACATTaGCTAAAGGCAGCCCCTTAC +
Preference number: 3 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLDYYAH*LKAAPY
Trigger: GTAAGGGGCTGCCTTTAGCAAATGTGCGTAGTAGTC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGACTACTACGCACATTaGCTAAAGGCAGCCCCTTAC +
Preference number: 3 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKDYYAH*LKAAPY
Trigger: GTAAGGGGCTGCCTTTAGCAAATGTGCGTAGTAGTC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGTTAAGCAGAAAATACTaGGTGGTTAGAGACAGCAGC +
Preference number: 3 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLLSRKY*VVRDSS
Trigger: GCTGCTGTCTCTAACCACCAAGTATTTTCTGCTTAA...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTTAAGCAGAAAATACTaGGTGGTTAGAGACAGCAGC +
Preference number: 3 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKLSRKY*VVRDSS
Trigger: GCTGCTGTCTCTAACCACCAAGTATTTTCTGCTTAA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
3UTR CCA 72 bp AATGGCTGCAAAATCAGGTACTCATTTAAGCTCAAATaGTTTAGTATCACTCCTCAGAAATGTATTCCTCCT +
Preference number: 3 (lower is better)
Translates to: NGCKIRYSFKLK*FSITPQKCIPP
Trigger: AGGAGGAATACATTTCTGAGGAGTGATACTAAACCATTTGAGCTTAAATGAGTACCTGATTTTGCAGCCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGGGACCAGTAGCTGCTaGGAACAGCGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LGEAEVKAVWGGGSLRVKGTSSC*EQRVQT
Trigger: GGTCTGCACACGCTGTTCTCAGCAGCTACTGGTCCC...CTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp CTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGCATGGCCACAGAGTaGGACCTCACTCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LCLYSLCMLGEAEVKAVWGMATE*DLTRWC
Trigger: ACACCAGCGAGTGAGGTCCCACTCTGTGGCCATGCC...CCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp CTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGCAAGTCCAGGACGATaGCATCCTCTGCTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: LYVGGGRGEGCLGWRIFKASPGR*HPLLVW
Trigger: CCAGACGAGCAGAGGATGGCATCGTCCTGGACTTGC...CTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGCAATGGCGACGAAGGTaGTCAACTCCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: VQSLYVGGGRGEGCLGWRQWRRR*STPKSR
Trigger: CCTGGATTTGGGAGTTGAGCACCTTCGTCGCCATTG...CCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGCATCCTCTGCTCGTCTaGCCCTTAGTTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: VQSLYVGGGRGEGCLGWRHPLLV*PLVLHS
Trigger: TGAGTGGAGAACTAAGGGCCAGACGAGCAGAGGATG...CCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp TACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGAGGGGAGGAAAGCCAATaGCGACGAAGGTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: YSLCMLGEAEVKAVWGGGGEESQ*RRRCST
Trigger: AGTTGAGCACCTTCGTCGCCATTGGCTTTCCTCCCC...TCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAAATTCTGCCGCCCGGTaGCGAAGGGTTTTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VGGGRGEGCLGWRIFKGENSAAR*RRVLSQ
Trigger: CTGGCTTAAAACCCTTCGCCACCGGGCGGCAGAATT...TTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp TACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGACTTTACGTCTTCTTCTaGGCTGACGGGACTGCGAGT +
Preference number: 4 (lower is better)
Translates to: YSLCMLGEAEVKAVWGGGLYVFF*ADGTAS
Trigger: ACTCGCAGTCCCGTCAGCCCAGAAGAAGACGTAAAG...TCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp ATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGTGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: MLGEAEVKAVWGGGSLRVWDLTR*CKPSQS
Trigger: GGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCA...CACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp TGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGTGCAGACCCTGTCACTaGGTCTTCAGCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: CMLGEAEVKAVWGGGSLRCRPCH*VFSHTN
Trigger: GTTGGTGTGGCTGAAGACCCAGTGACAGGGTCTGCA...CCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR TCA 90 bp GGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGAATTTTACGCAGATTCCCAAGATaGGAGAGGCTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRGEGCLGWRIFKGEGILRRFPR*ERLELG
Trigger: CCCCAGCTCCAGCCTCTCTCATCTTGGGAATCTGCG...TAAAATTCCTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp TACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGACTCTCCCTAGCTTTCTaGTCTCTAGGGCAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: YSLCMLGEAEVKAVWGGGLSLAF*SLGQLD
Trigger: ATCTAGCTGCCCTAGAGACCAGAAAGCTAGGGAGAG...TCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp TACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGACCTGGACCAGTGTGTTaGCTATGGCAGTCTTTATCA +
Preference number: 4 (lower is better)
Translates to: YSLCMLGEAEVKAVWGGGPGPVC*LWQSLS
Trigger: TGATAAAGACTGCCATAGGCAACACACTGGTCCAGG...TCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp CTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGTCAAATGCTTGGGTCTaGCCACCAGGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LCLYSLCMLGEAEVKAVWSNAWV*PPGSPL
Trigger: TAAAGGAGAGCCTGGTGGGCAGACCCAAGCATTTGA...CCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGAAAGCAGGAACTTTGTaGAAAGTTGTCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VQSLYVGGGRGEGCLGWRKAGTL*KVVCRV
Trigger: CACCCGACAGACAACTTTGCACAAAGTTCCTGCTTT...CCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGAATTTTAGCTGAGAACAGCGTGTaGAGACCCTGTCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRGEGCLGWRIFKGEGILAENSV*RPCHWV
Trigger: GACCCAGTGACAGGGTCTGCACACGCTGTTCTCAGC...TAAAATTCCTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGAATTTTAGTTTTAAGCCAGGCTTaGCTGCTGACGGGAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGEGCLGWRIFKGEGILVLSQA*LLTGGG
Trigger: TCCCCCTCCCGTCAGCAGCCAAGCCTGGCTTAAAAC...TAAAATTCCTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGCAAGTCCAGGACGATaGCATCCTCTGCTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISASPGR*HPLLVW
Trigger: CCAGACGAGCAGAGGATGGCATCGTCCTGGACTTGC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp AGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTAAATTGCTGGTAGCCTaGTTTACGTCTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SLCMLGEAEVKAVWGGGSKLLVA*FTSSSG
Trigger: CCCAGAAGAAGACGTAAAGCAGGCTACCAGCAATTT...AGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGCTGAGAACAGCGTGTaGAGACCCTGTCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISAENSV*RPCHWV
Trigger: GACCCAGTGACAGGGTCTGCACACGCTGTTCTCAGC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAACCAGTGTGTTGCCTATaGCAGTCTTTATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: VGGGRGEGCLGWRIFKGEPVCCL*QSLSSP
Trigger: AGGACTTGATAAAGACTGCCATAGGCAACACACTGG...TTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR TCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACGCAGATTCCCAAGATaGGAGAGGCTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLRRFPR*ERLELG
Trigger: CCCCAGCTCCAGCCTCTCTCATCTTGGGAATCTGCG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR TCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGGGACCAGTAGCTGCTaGGAACAGCGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLGTSSC*EQRVQT
Trigger: GGTCTGCACACGCTGTTCTCAGCAGCTACTGGTCCC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGGAGGTTCATCTCCCTTaGAATTTTCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: MLGEAEVKAVWGGGSLRVEVHLP*NFLMHV
Trigger: GACATGCATCAGAAAATTGCAAGGGAGATGAACCTC...CACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGGGGAGGAAAGCCAATaGCGACGAAGGTGCTCAACT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISGEESQ*RRRCST
Trigger: AGTTGAGCACCTTCGTCGCCATTGGCTTTCCTCCCC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATGCAGACCCTGTCACTaGGTCTTCAGCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISCRPCH*VFSHTN
Trigger: GTTGGTGTGGCTGAAGACCCAGTGACAGGGTCTGCA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACCATGTTGGCCAGGCTaGTGTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLPCWPG*CRTPDL
Trigger: GAGGTCAGGGGTTCGACACCAGCCTGGCCAACATGG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGAGGTTTCACCATGTTaGCCAGGCTGGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISEVSPC*PGWCRT
Trigger: GGTTCGACACCAGCCTGGCCAACATGGTGAAACCTC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGGGACCAGTAGCTGCTaGGAACAGCGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLGTSSC*EQRVQT
Trigger: GGTCTGCACACGCTGTTCTCAGCAGCTACTGGTCCC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAACTCCTAGGTTCAAGTaGTCCTCCTGCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISTPRFK*SSCLVL
Trigger: CAGGACAAGGCAGGAGGATCACTTGAACCTAGGAGT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR GCA 90 bp CTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGAAGTTGTCTGTCGGGTaGAGTTTTCGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LYVGGGRGEGCLGWRIFKKLSVG*SFRIKA
Trigger: TGCTTTTATCCGAAAACTGCACCCGACAGACAACTT...CTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACAATGGCGACGAAGGTaGTCAACTCCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISQWRRR*STPKSR
Trigger: CCTGGATTTGGGAGTTGAGCACCTTCGTCGCCATTG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATCAAGCGATTCTCCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISSSDSP*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGGAGAATCGCTTGA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAAGTTCTCGCTGTGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISKFSLC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAACACAGCGAGAACTT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACATCCTCTGCTCGTCTaGCCCTTAGTTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISHPLLV*PLVLHS
Trigger: TGAGTGGAGAACTAAGGGCCAGACGAGCAGAGGATG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGAGCTTTTGGGTATCTaGAGAATAACAGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: CMLGEAEVKAVWGGGSLRELLGI*RITDVL
Trigger: CAGGACATCTGTTATTCTCCAGATACCCAAAAGCTC...CCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISWDLTR*CKPSQS
Trigger: GGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGGCATGGCCACAGAGTaGGACCTCACTCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLGMATE*DLTRWC
Trigger: ACACCAGCGAGTGAGGTCCCACTCTGTGGCCATGCC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCCATGTTGGCCAGGCTaGTGTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLPCWPG*CRTPDL
Trigger: GAGGTCAGGGGTTCGACACCAGCCTGGCCAACATGG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTTCGTACCTGTCACTaGGTCTTCAGCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISLRTCH*VFSHTN
Trigger: GTTGGTGTGGCTGAAGACCCAGTGACAGGTACGAAG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468798.5
CDS-3UTR CCA 90 bp CAGTTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGGAAGGCTGTTTGGGGTaGAGGATCTTTAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: QLLYLCLYSLCMLGEAEVEGCLG*RIFKGE
Trigger: TTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTC...CACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CCA 90 bp GTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGTCAACAAACACTTATTaGGCAGTTACTGTATCTGTG +
Preference number: 4 (lower is better)
Translates to: VQSLYVGGGRGEGCLGWRSTNTY*AVTVSV
Trigger: CACAGATACAGTAACTGCCCAATAAGTGTTTGTTGA...CCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR TCA 90 bp TACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGACGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: YSLCMLGEAEVKAVWGGGRCKIS*VKVKCL
Trigger: CAAGCATTTGACTTTTACTCAAGATATTTTGCACCG...TCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCGCAGATTCCCAAGATaGGAGAGGCTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKRRFPR*ERLELG
Trigger: CCCCAGCTCCAGCCTCTCTCATCTTGGGAATCTGCG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGGGACCAGTAGCTGCTaGGAACAGCGTGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKGTSSC*EQRVQT
Trigger: GGTCTGCACACGCTGTTCTCAGCAGCTACTGGTCCC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGCAAGTCCAGGACGATaGCATCCTCTGCTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLASPGR*HPLLVW
Trigger: CCAGACGAGCAGAGGATGGCATCGTCCTGGACTTGC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATCAAATGCTTGGGTCTaGCCACCAGGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISSNAWV*PPGSPL
Trigger: TAAAGGAGAGCCTGGTGGGCAGACCCAAGCATTTGA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGCTGAGAACAGCGTGTaGAGACCCTGTCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLAENSV*RPCHWV
Trigger: GACCCAGTGACAGGGTCTGCACACGCTGTTCTCAGC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTTGTCCTGCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISLVLPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGCAGGACAAG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGGCATGGCCACAGAGTaGGACCTCACTCGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKGMATE*DLTRWC
Trigger: ACACCAGCGAGTGAGGTCCCACTCTGTGGCCATGCC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACAGGCTGGAGTGCAGTaGTGTGATCTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLQAGVQ*CDLCSL
Trigger: CAGTGAGCAGAGATCACACCACTGCACTCCAGCCTG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGAATTTTAAGGATTCCCACGAAATaGTCTTGCTGTGAATGCATC +
Preference number: 4 (lower is better)
Translates to: GRGEGCLGWRIFKGEGILRIPTK*SCCECI
Trigger: GATGCATTCACAGCAAGAGCATTTCGTGGGAATCCT...TAAAATTCCTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACCTGGACCAGTGTGTTaGCTATGGCAGTCTTTATCA +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISPGPVC*LWQSLS
Trigger: TGATAAAGACTGCCATAGGCAACACACTGGTCCAGG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGCCTGTGTTTTCAACTTaGAGCAGATTCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LLYLCLYSLCMLGEAEVKPVFST*SRFSVF
Trigger: GAACACGGAGAATCTGCTGCAAGTTGAAAACACAGG...CTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGCTGAGAACAGCGTGTaGAGACCCTGTCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKAENSV*RPCHWV
Trigger: GACCCAGTGACAGGGTCTGCACACGCTGTTCTCAGC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGTGATCTCTGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLVISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCAGAGATCAC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAAGTTCTCGCTGTGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLKFSLC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAACACAGCGAGAACTT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACTTTACGTCTTCTTCTaGGCTGACGGGACTGCGAGT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLLYVFF*ADGTAS
Trigger: ACTCGCAGTCCCGTCAGCCCAGAAGAAGACGTAAAG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000309049.8
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLWDLTR*CKPSQS
Trigger: GGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGTGCAGACCCTGTCACTaGGTCTTCAGCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLCRPCH*VFSHTN
Trigger: GTTGGTGTGGCTGAAGACCCAGTGACAGGGTCTGCA...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCTGCTTTACGTCTTCTaGGCTGACGGGACTGCGAGT +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLLLYVF*ADGTAS
Trigger: ACTCGCAGTCCCGTCAGCCCAGAAGACGTAAAGCAG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358769.7
CDS-3UTR TCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGACTCCTAGGTTCAAGTaGTCCTCCTGCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLTPRFK*SSCLVL
Trigger: CAGGACAAGGCAGGAGGATCACTTGAACCTAGGAGT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAGGATTCCCACGAAATaGTCTTGCTGTGAATGCATC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISRIPTK*SCCECI
Trigger: GATGCATTCACAGCAAGAGCATTTCGTGGGAATCCT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACCTGTGTTTTCAACTTaGAGCAGATTCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISPVFST*SRFSVF
Trigger: GAACACGGAGAATCTGCTGCAAGTTGAAAACACAGG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATCAAATGCTTGGGTCTaGCCACCAGGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLSNAWV*PPGSPL
Trigger: TAAAGGAGAGCCTGGTGGGCAGACCCAAGCATTTGA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAAAGCAGGAACTTTGTaGAAAGTTGTCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISKAGTL*KVVCRV
Trigger: CACCCGACAGACAACTTTGCACAAAGTTCCTGCTTT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGTCAAGCGATTCTCCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLSSDSP*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGGAGAATCGCTTGA...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAAGTTCTCGCTGTGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLKFSLC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAACACAGCGAGAACTT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCATCCTCTGCTCGTCTaGCCCTTAGTTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLHPLLV*PLVLHS
Trigger: TGAGTGGAGAACTAAGGGCCAGACGAGCAGAGGATG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACCAGTGTGTTGCCTATaGCAGTCTTTATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISPVCCL*QSLSSP
Trigger: AGGACTTGATAAAGACTGCCATAGGCAACACACTGG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTGCAGACCCTGTCACTaGGTCTTCAGCCACACCAAC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKCRPCH*VFSHTN
Trigger: GTTGGTGTGGCTGAAGACCCAGTGACAGGGTCTGCA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGTCAACCCTTCCGTCTaGACGAAGGGAAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLVNPSV*TKGNSQ
Trigger: CTGGGAATTTCCCTTCGTCCAGACGGAAGGGTTGAC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGAGGTTTCACCATGTTaGCCAGGCTGGTGTCGAACC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKEVSPC*PGWCRT
Trigger: GGTTCGACACCAGCCTGGCCAACATGGTGAAACCTC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGTGTGTGTGTGTGTGTaGATGGAGTCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISVCVCV*MESYSV
Trigger: AACAGAGTAAGACTCCATCCACACACACACACACAC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp GTTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAATCCCTTGCAATTTTCTaGTGCATGTCTTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: VTVSVSVQSLYVGGGRGESLAIF*CMSSSN
Trigger: ATTGGATGAAGACATGCATCAGAAAATTGCAAGGGA...TTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGACTCCTAGGTTCAAGTaGTCCTCCTGCCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKTPRFK*SSCLVL
Trigger: CAGGACAAGGCAGGAGGATCACTTGAACCTAGGAGT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp CAGTTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGTGCTGTGAATGCATCTaGTATGAAAATAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QLLYLCLYSLCMLGEAEVCCECI*YENRKL
Trigger: AAGCTTCCTATTTTCATAGCAGATGCATTCACAGCA...CACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGAGGTTCATCTCCCTTaGAATTTTCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISEVHLP*NFLMHV
Trigger: GACATGCATCAGAAAATTGCAAGGGAGATGAACCTC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAAGTTGTCTGTCGGGTaGAGTTTTCGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISKLSVG*SFRIKA
Trigger: TGCTTTTATCCGAAAACTGCACCCGACAGACAACTT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCAATGGCGACGAAGGTaGTCAACTCCCAAATCCAGG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKQWRRR*STPKSR
Trigger: CCTGGATTTGGGAGTTGAGCACCTTCGTCGCCATTG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATCTAGGCTGTCAGTGTaGCCTCTAAAACAACAGCTG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLSRLSV*PLKQQL
Trigger: CAGCTGTTGTTTTAGAGGGCACACTGACAGCCTAGA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGTGATCTCTGCTCACTaGAACTTCTGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKVISAH*NFCLLG
Trigger: ACCCAGGAGGCAGAAGTTGCAGTGAGCAGAGATCAC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCTTGTCCTGCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLLVLPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGCAGGACAAG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGAAGTTCTCGCTGTGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKKFSLC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGGCAACACAGCGAGAACTT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAAATTGCTGGTAGCCTaGTTTACGTCTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLKLLVA*FTSSGL
Trigger: CAGCCCAGAAGACGTAAAGCAGGCTACCAGCAATTT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCATCCTCTGCTCGTCTaGCCCTTAGTTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKHPLLV*PLVLHS
Trigger: TGAGTGGAGAACTAAGGGCCAGACGAGCAGAGGATG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGAAGTCCTCTACTTCATaGAAGTCCTGGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKKSSTS*KSWGWA
Trigger: AGCCCACCCCCAGGACTTCCATGAAGTAGAGGACTT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKWDLTR*CKPSQS
Trigger: GGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGTCAACCCTTCCGTCTaGACGAAGGGAAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKVNPSV*TKGNSQ
Trigger: CTGGGAATTTCCCTTCGTCCAGACGGAAGGGTTGAC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATCCCTTGCAATTTTCTaGTGCATGTCTTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISSLAIF*CMSSSN
Trigger: ATTGGATGAAGACATGCATCAGAAAATTGCAAGGGA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTGTTGTAAACGTCACTaGGGCGGACGAGGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKCCKRH*GGRGAF
Trigger: AAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATTTCAAATACACTCATaGGTGGAGCCAAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISFQIHS*VEPKLH
Trigger: ATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAAA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAGGATTCCCACGAAATaGTCTTGCTGTGAATGCATC +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLRIPTK*SCCECI
Trigger: GATGCATTCACAGCAAGAGCATTTCGTGGGAATCCT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACCTGTGTTTTCAACTTaGAGCAGATTCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLPVFST*SRFSVF
Trigger: GAACACGGAGAATCTGCTGCAAGTTGAAAACACAGG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTCAAATGCTTGGGTCTaGCCACCAGGCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKSNAWV*PPGSPL
Trigger: TAAAGGAGAGCCTGGTGGGCAGACCCAAGCATTTGA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAAATTGCTGGTAGCCTaGTTTACGTCTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLKLLVA*FTSSSG
Trigger: CCCAGAAGAAGACGTAAAGCAGGCTACCAGCAATTT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309049.8
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCTTGTCCTGCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKLVLPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGCAGGACAAG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGCAGAAAATACTTGGTaGTTAGAGACAGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLAENTW*LETAAS
Trigger: TGACGCTGCTGTCTCTAACCACCAAGTATTTTCTGC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGTGTGTGTGTGTGTGTaGATGGAGTCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLVCVCV*MESYSV
Trigger: AACAGAGTAAGACTCCATCCACACACACACACACAC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISRCKIS*VKVKCL
Trigger: CAAGCATTTGACTTTTACTCAAGATATTTTGCACCG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR TCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGAGAACTACCATCAATaGGATCACCTTAAACAAACA +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISENYHQ*DHLKQT
Trigger: TGTTTGTTTAAGGTGATCTCATTGATGGTAGTTCTC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATGCTGTGAATGCATCTaGTATGAAAATAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISCCECI*YENRKL
Trigger: AAGCTTCCTATTTTCATAGCAGATGCATTCACAGCA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAAGTTGTCTGTCGGGTaGAGTTTTCGGATAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLKLSVG*SFRIKA
Trigger: TGCTTTTATCCGAAAACTGCACCCGACAGACAACTT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCCTGGACCAGTGTGTTaGCTATGGCAGTCTTTATCA +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKPGPVC*LWQSLS
Trigger: TGATAAAGACTGCCATAGGCAACACACTGGTCCAGG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCCTGTGTTTTCAACTTaGAGCAGATTCTCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLPVFST*SRFSVF
Trigger: GAACACGGAGAATCTGCTGCAAGTTGAAAACACAGG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAAAGCAGGAACTTTGTaGAAAGTTGTCTGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLKAGTL*KVVCRV
Trigger: CACCCGACAGACAACTTTGCACAAAGTTCCTGCTTT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTCTAGGCTGTCAGTGTaGCCTCTAAAACAACAGCTG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKSRLSV*PLKQQL
Trigger: CAGCTGTTGTTTTAGAGGGCACACTGACAGCCTAGA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCCAGTGTGTTGCCTATaGCAGTCTTTATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLPVCCL*QSLSSP
Trigger: AGGACTTGATAAAGACTGCCATAGGCAACACACTGG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGAGCTTTTGGGTATCTaGAGAATAACAGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLELLGI*RITDVL
Trigger: CAGGACATCTGTTATTCTCCAGATACCCAAAAGCTC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGGCAGAAAATACTTGGTaGTTAGAGACAGCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLAENTW*LETAAS
Trigger: TGACGCTGCTGTCTCTAACCACCAAGTATTTTCTGC...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAAATACACTCATGAGTaGAGCCAAAACTCCATTAGT +
Preference number: 4 (lower is better)
Translates to: GMSRHAQLRLHYFECLISKYTHE*SQNSIS
Trigger: ACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATCCCTTGCAATTTTCTaGTGCATGTCTTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLSLAIF*CMSSSN
Trigger: ATTGGATGAAGACATGCATCAGAAAATTGCAAGGGA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCCAGTGTGTTGCCTATaGCAGTCTTTATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKPVCCL*QSLSSP
Trigger: AGGACTTGATAAAGACTGCCATAGGCAACACACTGG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGTGTGTGTGTGTGTGTaGATGGAGTCTTACTCTGTT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKVCVCV*MESYSV
Trigger: AACAGAGTAAGACTCCATCCACACACACACACACAC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLRCKIS*VKVKCL
Trigger: CAAGCATTTGACTTTTACTCAAGATATTTTGCACCG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR TCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGAAACAGACGATCATTaGGGTTTCAAAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLETDDH*GFKNTD
Trigger: ATCTGTGTTTTTGAAACCTCAATGATCGTCTGTTTC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336578.5
CDS-3UTR GCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATGCTGTGAATGCATCTaGTATGAAAATAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLCCECI*YENRKL
Trigger: AAGCTTCCTATTTTCATAGCAGATGCATTCACAGCA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGTGCTCTTGCTGTGAATaGATCTGCTATGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLCSCCE*ICYENR
Trigger: CCTATTTTCATAGCAGATGCATTCACAGCAAGAGCA...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGAGGTTCATCTCCCTTaGAATTTTCTGATGCATGTC +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKEVHLP*NFLMHV
Trigger: GACATGCATCAGAAAATTGCAAGGGAGATGAACCTC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGAGCTTTTGGGTATCTaGAGAATAACAGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKELLGI*RITDVL
Trigger: CAGGACATCTGTTATTCTCCAGATACCCAAAAGCTC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTCCCTTGCAATTTTCTaGTGCATGTCTTCATCCAAT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKSLAIF*CMSSSN
Trigger: ATTGGATGAAGACATGCATCAGAAAATTGCAAGGGA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTTTCAAATACACTCATaGGTGGAGCCAAAACTCCAT +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKFQIHS*VEPKLH
Trigger: ATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAAA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGACACTCTTAATGACTTaGAAAAGTCCCCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKTLLMT*KSPHPK
Trigger: TTTGGGATGGGGACTTTTTCAAGTCATTAAGAGTGT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336578.5
ENST00000358769.7
CDS-3UTR GCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTGCTCTTGCTGTGAATaGATCTGCTATGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKCSCCE*ICYENR
Trigger: CCTATTTTCATAGCAGATGCATTCACAGCAAGAGCA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAAATACACTCATGAGTaGAGCCAAAACTCCATTAGT +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLKYTHE*SQNSIS
Trigger: ACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTATCATTTAAGCTCAAATaGTTTAGTATCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: MSRHAQLRLHYFECLISLSFKLK*FSITPQ
Trigger: CTGAGGAGTGATACTAAACCATTTGAGCTTAAATGA...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAGATCAGACTTCCTTTaGACAACAACTACCATTAAC +
Preference number: 4 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLRSDFL*TTTTIN
Trigger: GTTAATGGTAGTTGTTGTCCAAAGGAAGTCTGATCT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336578.5
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKRCKIS*VKVKCL
Trigger: CAAGCATTTGACTTTTACTCAAGATATTTTGCACCG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR TCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGGAGAACTACCATCAATaGGATCACCTTAAACAAACA +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKENYHQ*DHLKQT
Trigger: TGTTTGTTTAAGGTGATCTCATTGATGGTAGTTCTC...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CCA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGTCATTTAAGCTCAAATaGTTTAGTATCACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKSFKLK*FSITPQ
Trigger: CTGAGGAGTGATACTAAACCATTTGAGCTTAAATGA...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS CCA 90 bp AGGACAAAGGAGGCAGACGGCCTCCTTTGTAATTCTGCCGCCCGGTaGCGAAGGGTTTTAAGCCAGGCTTGGCTGCTGACGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: RTKEADGLLCNSAAR*RRVLSQAWLLTGGG
Trigger: TCCCCCTCCCGTCAGCAGCCAAGCCTGGCTTAAAACCCTTCGCCACCGGGCGGCAGAATTACAAAGGAGGCCGTCTGCCTCCTTTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS CCA 90 bp GGACTGCGAGTGACTTCTGACGCAGATTCCCAAGATGAGAGAGGCTaGAGCTGGGGGAGGAAAGCCAATGGCGACGAAGGTGCTCAACTC +
Preference number: 5 (lower is better)
Translates to: GLRVTSDADSQDERG*SWGRKANGDEGAQL
Trigger: GAGTTGAGCACCTTCGTCGCCATTGGCTTTCCTCCCCCAGCTCCAGCCTCTCTCATCTTGGGAATCTGCGTCAGAAGTCACTCGCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000358769.7
ENST00000495025.2
CDS GCA 90 bp TTCACGTGTTTTGTTACTCAGAGAGTAACTGAGCCATCCAGGCCCTaGCATCTGACCAGAACAGGAGCCCTGAAGGGTCTGCCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FTCFVTQRVTEPSRP*HLTRTGALKGLPSL
Trigger: GAGGCTGGGCAGACCCTTCAGGGCTCCTGTTCTGGTCAGATGGCAGGGCCTGGATGGCTCAGTTACTCTCTGAGTAACAAAACACGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 90 bp GCCCACTCACCACACAGACTCTGTGAAGCAGGCCAGGGTGCAGCTTaGTCAAAGAGCTTAACAGGAGGGGAAGGAAGAACAAGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: AHSPHRLCEAGQGAA*SKSLTGGEGRTSGN
Trigger: ATTCCCACTTGTTCTTCCTTCCCCTCCTGTTAAGCTCTTTGAGCAAGCTGCACCCTGGCCTGCTTCACAGAGTCTGTGTGGTGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS-3UTR CAA 90 bp TTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGGTTTTAAGCCAGGCTaGGCTGCTGACGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: LLYLCLYSLCMLGEAEVKGFKPG*AADGRG
Trigger: CCCCCTCCCGTCAGCAGCCAAGCCTGGCTTAAAACC...CTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS CCA 90 bp TGCAGAAGCCAGGGTGGCATGGCCACAGAGTGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCCAAAGCAGGAACTTTGTGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: CRSQGGMATEWDLTR*CKPSQSKAGTLCKV
Trigger: AACTTTGCACAAAGTTCCTGCTTTGGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCACTCTGTGGCCATGCCACCCTGGCTTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000478192.1
ENST00000495025.2
CDS-3UTR CAA 90 bp TTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGAGAGGTGAAGGCTGTTaGGGGTGGAGGATCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LGEAEVKAVWGGGSLRVKRGEGC*GWRIFK
Trigger: CTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCT...CTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS TCA 90 bp ATTAGGACAAACCCATTTCACAGCCCACTCACCACACAGACTCTGTaGAGCAGGCCAGGGTGCAGCTTGCTCAAAGAGCTTAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: IRTNPFHSPLTTQTL*SRPGCSLLKELNRR
Trigger: CCTCCTGTTAAGCTCTTTGAGCAAGCTGCACCCTGGCCTGCTTCACAGAGTCTGTGTGGTGAGTGGGCTGTGAAATGGGTTTGTCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS-3UTR CAA 90 bp CTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACA +
Preference number: 5 (lower is better)
Translates to: LYVGGGRGEGCLGWRIFKADEEL*GIWRIT
Trigger: TGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGC...CTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS TCA 90 bp CCCAAAGAGAGGGAGAGTAGGAGTCATGACATTTCTGCCCACCTTTaGCTCATCCCTCTGCTCCCAGGTGGTGGACAATCTAGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: PKERESRSHDISAHL*LIPLLPGGGQSRSV
Trigger: AACACTTCTAGATTGTCCACCACCTGGGAGCAGAGGGATGAGTCAAAGGTGGGCAGAAATGTCATGACTCCTACTCTCCCTCTCTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 90 bp AGAGTAGGAGTCATGACATTTCTGCCCACCTTTGACTCATCCCTCTaGTCCCAGGTGGTGGACAATCTAGAAGTGTTGGCTCAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RVGVMTFLPTFDSSL*SQVVDNLEVLAQGA
Trigger: AGCTCCTTGAGCCAACACTTCTAGATTGTCCACCACCTGGGAGCAGAGGGATGAGTCAAAGGTGGGCAGAAATGTCATGACTCCTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACAAGTTCTCGCTGTGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISQVLAV*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACACAGCGAGAACTTG...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
CDS-3UTR CAA 90 bp TATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTACAGTCTCTGTATGTaGGGGGAGGCAGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: YLCLYSLCMLGEAEVKAVYSLCM*GEAEVK
Trigger: CTTCACCTCTGCCTCCCCCAACATACAGAGACTGTA...AACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS TCA 90 bp TGTCACTGGGTCTTCAGCCACACCAACCCACGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTGGGTCTGCCCACCAGGCTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CHWVFSHTNPRCKIS*VKVKCLGLPTRLSF
Trigger: AAAGGAGAGCCTGGTGGGCAGACCCAAGCATTTGACTTTTACTCAAGATATTTTGCACCGTGGGTTGGTGTGGCTGAAGACCCAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
ENST00000495025.2
CDS CCA 90 bp GTGAAGCAGCTGTGCTTGTGCAATCTGCTTGGAACTTTTCTTCCATaGGGAAGCTGCACTCTGGATATGGTTGGGCATTTTCCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: VKQLCLCNLLGTFLP*GSCTLDMVGHFPES
Trigger: AGACTCAGGAAAATGCCCAACCATATCCAGAGTGCAGCTTCCCCATGGAAGAAAAGTTCCAAGCAGATTGCACAAGCACAGCTGCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS-3UTR CAA 90 bp CTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGAGAGGTTCATCTCCCTaGCAATTTTCTGATGCATGT +
Preference number: 5 (lower is better)
Translates to: LCLYSLCMLGEAEVKAVWRGSSP*QFSDAC
Trigger: ACATGCATCAGAAAATTGCAAGGGAGATGAACCTCT...CCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS TCA 90 bp TTGCTGAGTTTTGAATTTCACGTGTTTTGTTACTCAGAGAGTAACTaGGCCATCCAGGCCCTGCCATCTGACCAGAACAGGAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLSFEFHVFCYSESN*AIQALPSDQNRSPE
Trigger: TTCAGGGCTCCTGTTCTGGTCAGATGGCAGGGCCTGGATGGCTCAGTTACTCTCTGAGTAACAAAACACGTGAAATTCAAAACTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATCCTGGACCAGTGTGTaGCCTATGGCAGTCTTTATC +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISSWTSV*PMAVFI
Trigger: GATAAAGACTGCCATAGGCAACACACTGGTCCAGGA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACA +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISADEEL*GIWRIT
Trigger: TGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGC...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp TTACTGTATCTGTGTCTGTACAGTCTCTGTATGTTGGGGGAGGCAGAGGTGAAGTCCAAAGCAGGAACTTaGTGCAAAGTTGTCTGTCGG +
Preference number: 5 (lower is better)
Translates to: LLYLCLYSLCMLGEAEVKSKAGT*CKVVCR
Trigger: CCGACAGACAACTTTGCACAAAGTTCCTGCTTTGGA...CTTCACCTCTGCCTCCCCCAACATACAGAGACTGTACAGACACAGATACAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGCAAGTTCTCGCTGTGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLQVLAV*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACACAGCGAGAACTTG...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATCCAAAGCAGGAACTTaGTGCAAAGTTGTCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISSKAGT*CKVVCR
Trigger: CCGACAGACAACTTTGCACAAAGTTCCTGCTTTGGA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCGAGGTTTCACCATGTaGGCCAGGCTGGTGTCGAAC +
Preference number: 5 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKRGFTM*ARLVSN
Trigger: GTTCGACACCAGCCTGGCCAACATGGTGAAACCTCG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCAAGTTCTCGCTGTGTaGCCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKQVLAV*PRLVSN
Trigger: GTTCGAGACCAGCCTGGGCAACACAGCGAGAACTTG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp CTGTATGTTGGGGGAGGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGTTCAACAAACACTTATaGGGCAGTTACTGTATCTGT +
Preference number: 5 (lower is better)
Translates to: LYVGGGRGEGCLGWRIFKFNKHL*GSYCIC
Trigger: ACAGATACAGTAACTGCCCAATAAGTGTTTGTTGAA...CTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCCAACATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS TCA 90 bp CAAAGTGCTGATGCAGCCAAAAATCTTACCTGTTGTAAACGTCACTaGGGCGGACGAGGAGCTTTTGGGTATCTGGAGAATAACAGATGT +
Preference number: 5 (lower is better)
Translates to: QSADAAKNLTCCKRH*GGRGAFGYLENNRC
Trigger: ACATCTGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTAAGATTTTTGGCTGCATCAGCACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 90 bp GAGGCAAACAGCAGCAGGATTCCCACGAAATGCTCTTGCTGTGAATaGATCTGCTATGAAAATAGGAAGCTTCATTTTCCTTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: EANSSRIPTKCSCCE*ICYENRKLHFPCKL
Trigger: CAGCTTGCAAGGAAAATGAAGCTTCCTATTTTCATAGCAGATGCATTCACAGCAAGAGCATTTCGTGGGAATCCTGCTGCTGTTTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000358769.7
ENST00000495025.2
CDS-3UTR CAA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACA +
Preference number: 5 (lower is better)
Translates to: MSRHAQLRLHYFECLISLADEEL*GIWRIT
Trigger: TGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGC...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp GGCAGAGGTGAAGGCTGTTTGGGGTGGAGGATCTTTAAGGGTGAAGGAATTTTACCTTGCAAGCTGTTTTaGCAAGTTCTCAAAATTGCT +
Preference number: 5 (lower is better)
Translates to: GRGEGCLGWRIFKGEGILPCKLF*QVLKIA
Trigger: AGCAATTTTGAGAACTTGCAAAAACAGCTTGCAAGG...TAAAATTCCTTCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCATTAAGCAGAAAATACTaGGTGGTTAGAGACAGCAGC +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISLSRKY*VVRDSS
Trigger: GCTGCTGTCTCTAACCACCAAGTATTTTCTGCTTAA...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGTCCAAAGCAGGAACTTaGTGCAAAGTTGTCTGTCGG +
Preference number: 5 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLSKAGT*CKVVCR
Trigger: CCGACAGACAACTTTGCACAAAGTTCCTGCTTTGGA...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp GGCATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCAAACACTCTTAATGACTaGAAAAAGTCCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: GMSRHAQLRLHYFECLISNTLND*KKSPSQ
Trigger: TTGGGATGGGGACTTTTTCAAGTCATTAAGAGTGTT...TGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTAAGAGGTTCATCTCCCTaGCAATTTTCTGATGCATGT +
Preference number: 5 (lower is better)
Translates to: MSRHAQLRLHYFECLISLRGSSP*QFSDAC
Trigger: ACATGCATCAGAAAATTGCAAGGGAGATGAACCTCT...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAGAGGTTCATCTCCCTaGCAATTTTCTGATGCATGT +
Preference number: 5 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLRGSSP*QFSDAC
Trigger: ACATGCATCAGAAAATTGCAAGGGAGATGAACCTCT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp ATGAGCCGCCACGCCCAGCTGAGATTACATTACTTTGAGTGTTTAATTTCACTACCTTGCAAGCTGTTTTaGCAAGTTCTCAAAATTGCT +
Preference number: 5 (lower is better)
Translates to: MSRHAQLRLHYFECLISLPCKLF*QVLKIA
Trigger: AGCAATTTTGAGAACTTGCAAAAACAGCTTGCAAGG...TAGTGAAATTAAACACTCAAAGTAATGTAATCTCAGCTGGGCGTGGCGGCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGAGAGGTTCATCTCCCTaGCAATTTTCTGATGCATGT +
Preference number: 5 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKRGSSP*QFSDAC
Trigger: ACATGCATCAGAAAATTGCAAGGGAGATGAACCTCT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
CDS-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGCCTTGCAAGCTGTTTTaGCAAGTTCTCAAAATTGCT +
Preference number: 5 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKPCKLF*QVLKIA
Trigger: AGCAATTTTGAGAACTTGCAAAAACAGCTTGCAAGG...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309049.8
ENST00000358769.7
CDS-3UTR CAA 90 bp ACTTTTCAATTTTGTGTGTGTGTGTGTGTGTGTGGATGGAGTCTTACTCTGTTGAGAAACAGACGATCATaGAGGTTTCAAAAACACAGA +
Preference number: 5 (lower is better)
Translates to: TFQFCVCVCVCGWSLTLLRNRRS*RFQKHR
Trigger: TCTGTGTTTTTGAAACCTCAATGATCGTCTGTTTCT...CAACAGAGTAAGACTCCATCCACACACACACACACACACACAAAATTGAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336578.5
CDS-3UTR CAA 90 bp TTCAAATACACTCATGAGTGGAGCCAAAACTCCATTAGTTCATTAGTCTGGAAGAACACTCTTAATGACTaGAAAAAGTCCCCATCCCAA +
Preference number: 5 (lower is better)
Translates to: FKYTHEWSQNSISSLVWKNTLND*KKSPSQ
Trigger: TTGGGATGGGGACTTTTTCAAGTCATTAAGAGTGTT...CTTCCAGACTAATGAACTAATGGAGTTTTGGCTCCACTCATGAGTGTATTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336578.5
ENST00000358769.7
CDS CCA 72 bp GAGGCAGACGGCCTCCTTTGTAATTCTGCCGCCCGGTaGCGAAGGGTTTTAAGCCAGGCTTGGCTGCTGACG +
Preference number: 6 (lower is better)
Translates to: EADGLLCNSAAR*RRVLSQAWLLT
Trigger: CGTCAGCAGCCAAGCCTGGCTTAAAACCCTTCGCCACCGGGCGGCAGAATTACAAAGGAGGCCGTCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS GCA 72 bp GGGGGTGGGCTGGATAAAGAGGCAAGTCCAGGACGATaGCATCCTCTGCTCGTCTGGCCCTTAGTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: GGGLDKEASPGR*HPLLVWPLVLH
Trigger: GTGGAGAACTAAGGGCCAGACGAGCAGAGGATGGCATCGTCCTGGACTTGCCTCTTTATCCAGCCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS CCA 72 bp ACGGGAGGGGGAAGGGGCGTACTCTCCCTAGCTTTCTaGTCTCTAGGGCAGCTAGATAAACGGAAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: TGGGRGVLSLAF*SLGQLDKRKVS
Trigger: GGAGACTTTCCGTTTATCTAGCTGCCCTAGAGACCAGAAAGCTAGGGAGAGTACGCCCCTTCCCCCTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495025.2
CDS CCA 72 bp CAGGGTGGCATGGCCACAGAGTGGGACCTCACTCGCTaGTGTAAACCATCTCAGTCCAAAGCAGGAACTTTG +
Preference number: 6 (lower is better)
Translates to: QGGMATEWDLTR*CKPSQSKAGTL
Trigger: CAAAGTTCCTGCTTTGGACTGAGATGGTTTACACCAGCGAGTGAGGTCCCACTCTGTGGCCATGCCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000478192.1
ENST00000495025.2
CDS TCA 72 bp TTTCTTTCTTCCCCAGATGCTGGGACCAGTAGCTGCTaGGAACAGCGTGTGCAGACCCTGTCACTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: FLSSPDAGTSSC*EQRVQTLSLGL
Trigger: AAGACCCAGTGACAGGGTCTGCACACGCTGTTCTCAGCAGCTACTGGTCCCAGCATCTGGGGAAGAAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS GCA 72 bp CCACACAGACTCTGTGAAGCAGGCCAGGGTGCAGCTTaGTCAAAGAGCTTAACAGGAGGGGAAGGAAGAACA +
Preference number: 6 (lower is better)
Translates to: PHRLCEAGQGAA*SKSLTGGEGRT
Trigger: TGTTCTTCCTTCCCCTCCTGTTAAGCTCTTTGAGCAAGCTGCACCCTGGCCTGCTTCACAGAGTCTGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 72 bp CCATCCTCCCACATCAAGCATTCTCGTCCTTTGCAGTaGAGCCCACTGTTCCCAAAGAGAGGGAGAGTAGGA +
Preference number: 6 (lower is better)
Translates to: PSSHIKHSRPLQ*SPLFPKRGRVG
Trigger: TCCTACTCTCCCTCTCTTTGGGAACAGTGGGCTGCACTGCAAAGGACGAGAATGCTTGATGTGGGAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS TCA 72 bp AGGGAGAGTAGGAGTCATGACATTTCTGCCCACCTTTaGCTCATCCCTCTGCTCCCAGGTGGTGGACAATCT +
Preference number: 6 (lower is better)
Translates to: RESRSHDISAHL*LIPLLPGGGQS
Trigger: AGATTGTCCACCACCTGGGAGCAGAGGGATGAGTCAAAGGTGGGCAGAAATGTCATGACTCCTACTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CCA 72 bp AACGTCACTGAGGCGGACGAGGAGCTTTTGGGTATCTaGAGAATAACAGATGTCCTGGACCAGTGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: NVTEADEELLGI*RITDVLDQCVA
Trigger: GGCAACACACTGGTCCAGGACATCTGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS CAA 90 bp CAGAAACGACCTGTTGTAAACGTCACTGAGGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACAGATGTCCTGGACCAGTGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: QKRPVVNVTEADEEL*GIWRITDVLDQCVA
Trigger: GGCAACACACTGGTCCAGGACATCTGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTCGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS CAA 72 bp CCTGTTGTAAACGTCACTGAGGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACAGATGTCCTGGACCAG +
Preference number: 6 (lower is better)
Translates to: PVVNVTEADEEL*GIWRITDVLDQ
Trigger: CTGGTCCAGGACATCTGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS TCA 72 bp GTCTTCAGCCACACCAACCCACGGTGCAAAATATCTTaGGTAAAAGTCAAATGCTTGGGTCTGCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: VFSHTNPRCKIS*VKVKCLGLPTR
Trigger: CCTGGTGGGCAGACCCAAGCATTTGACTTTTACTCAAGATATTTTGCACCGTGGGTTGGTGTGGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000468798.5
ENST00000495025.2
CDS TCA 72 bp TCAGGTTCTCCAGAAACGACCTGTTGTAAACGTCACTaGGGCGGACGAGGAGCTTTTGGGTATCTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: SGSPETTCCKRH*GGRGAFGYLEN
Trigger: ATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTCGTTTCTGGAGAACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS CAA 72 bp CAGGGAAAGAAACACTCTGGCTGCGTAAATCATGGTTaGACTGGACACAGCACAGCCAGACTAAGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: QGKKHSGCVNHG*TGHSTARLRKS
Trigger: GCTCTTCCTTAGTCTGGCTGTGCTGTGTCCAGTCAAACCATGATTTACGCAGCCAGAGTGTTTCTTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CAA 90 bp AAAATCTTACCTGTTGTAAACGTCACTGAGGCGGACGAGGAGCTTTaGGGTATCTGGAGAATAACAGATGTCCTGGACCAGTGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: KILPVVNVTEADEEL*GIWRITDVLDQCVA
Trigger: GGCAACACACTGGTCCAGGACATCTGTTATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CAA 90 bp GTGTTATGGGATGTTCAAGTAAGGCAACCAACCATCCTGCCTGGTTaGCCTGAGACTGTTCTGGTTTTAGCACTGAAAGTTCTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: VLWDVQVRQPTILPG*PETVLVLALKVLSP
Trigger: AGGGCTCAGAACTTTCAGTGCTAAAACCAGAACAGTCTCAGGCAAACCAGGCAGGATGGTTGGTTGCCTTACTTGAACATCCCATAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS TCA 72 bp GATGCAGCCAAAAATCTTACCTGTTGTAAACGTCACTaGGGCGGACGAGGAGCTTTTGGGTATCTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: DAAKNLTCCKRH*GGRGAFGYLEN
Trigger: ATTCTCCAGATACCCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTAAGATTTTTGGCTGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS TCA 72 bp TTTGAATTTCACGTGTTTTGTTACTCAGAGAGTAACTaGGCCATCCAGGCCCTGCCATCTGACCAGAACAGG +
Preference number: 6 (lower is better)
Translates to: FEFHVFCYSESN*AIQALPSDQNR
Trigger: CCTGTTCTGGTCAGATGGCAGGGCCTGGATGGCTCAGTTACTCTCTGAGTAACAAAACACGTGAAATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CCA 72 bp TTTGTGATCCTCCTCTTCCATTGTTTAACCCTCCCCTaGGCTCAAGTAAAAAGTACCTGTCACTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: FVILLFHCLTLP*AQVKSTCHWVF
Trigger: GAAGACCCAGTGACAGGTACTTTTTACTTGAGCCCAGGGGAGGGTTAAACAATGGAAGAGGAGGATCACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CCA 72 bp CTGTGCTTGTGCAATCTGCTTGGAACTTTTCTTCCATaGGGAAGCTGCACTCTGGATATGGTTGGGCATTTT +
Preference number: 6 (lower is better)
Translates to: LCLCNLLGTFLP*GSCTLDMVGHF
Trigger: AAAATGCCCAACCATATCCAGAGTGCAGCTTCCCCATGGAAGAAAAGTTCCAAGCAGATTGCACAAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CCA 72 bp CTCAAAGAGCTTAACAGGAGGGGAAGGAAGAACAAGTaGGAATGTCTTCCTATCAGGGAAAGAAACACTCTG +
Preference number: 6 (lower is better)
Translates to: LKELNRRGRKNK*ECLPIRERNTL
Trigger: CAGAGTGTTTCTTTCCCTGATAGGAAGACATTCCCACTTGTTCTTCCTTCCCCTCCTGTTAAGCTCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 72 bp AGCAGCAGGATTCCCACGAAATGCTCTTGCTGTGAATaGATCTGCTATGAAAATAGGAAGCTTCATTTTCCT +
Preference number: 6 (lower is better)
Translates to: SSRIPTKCSCCE*ICYENRKLHFP
Trigger: AGGAAAATGAAGCTTCCTATTTTCATAGCAGATGCATTCACAGCAAGAGCATTTCGTGGGAATCCTGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000358769.7
ENST00000495025.2
CDS GCA 72 bp TATCTGGAGAATAACAGATGTCCTGGACCAGTGTGTTaGCTATGGCAGTCTTTATCAAGTCCTCTACTTCAT +
Preference number: 6 (lower is better)
Translates to: YLENNRCPGPVC*LWQSLSSPLLH
Trigger: ATGAAGTAGAGGACTTGATAAAGACTGCCATAGGCAACACACTGGTCCAGGACATCTGTTATTCTCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000336578.5
ENST00000358769.7
ENST00000495025.2
CDS GCA 72 bp CACTCTGTGCCAATTAAAATCTTTGTGAAGCAGCTGTaGTTGTGCAATCTGCTTGGAACTTTTCTTCCATGG +
Preference number: 6 (lower is better)
Translates to: HSVPIKIFVKQL*LCNLLGTFLPW
Trigger: CCATGGAAGAAAAGTTCCAAGCAGATTGCACAAGCACAGCTGCTTCACAAAGATTTTAATTGGCACAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS CAA 72 bp TCCCTCTGCTCCCAGGTGGTGGACAATCTAGAAGTGTaGGCTCAAGGAGCTAGTTTTGTTGTTATTATTAAA +
Preference number: 6 (lower is better)
Translates to: SLCSQVVDNLEV*AQGASFVVIIK
Trigger: TTTAATAATAACAACAAAACTAGCTCCTTGAGCCAACACTTCTAGATTGTCCACCACCTGGGAGCAGAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277795.8
CDS GCA 72 bp AGGATTCCCACGAAATGCTCTTGCTGTGAATGCATCTaGTATGAAAATAGGAAGCTTCATTTTCCTTGCAAG +
Preference number: 6 (lower is better)
Translates to: RIPTKCSCCECI*YENRKLHFPCK
Trigger: CTTGCAAGGAAAATGAAGCTTCCTATTTTCATAGCAGATGCATTCACAGCAAGAGCATTTCGTGGGAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277795.8
ENST00000309049.8
ENST00000358769.7
ENST00000495025.2
CDS CCA 72 bp CTGAGAAACCCTTCAGTCCCAAGCAAACTCAGATGTTaGTTATCAAAGTCCAAAGGCCTTTATACTCTAGAA +
Preference number: 6 (lower is better)
Translates to: LRNPSVPSKLRC*LSKSKGLYTLE
Trigger: TTCTAGAGTATAAAGGCCTTTGGACTTTGATAACCAACATCTGAGTTTGCTTGGGACTGAAGGGTTTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277795.8