RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000196092

Ensembl transcript IDs: ENST00000358127.9, ENST00000377840.6, ENST00000377847.6, ENST00000377852.7, ENST00000377853.6, ENST00000414447.5, ENST00000446742.5, ENST00000520083.1, ENST00000520154.6, ENST00000520281.5, ENST00000522003.5, ENST00000523145.5, ENST00000523241.6, ENST00000523493.5, ENST00000524340.5, ENST00000651199.1, ENST00000651550.1

Found 2084 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGCAACGCCAGGCCCTCACTGCCCGCCACCCTCTGTTGTGCTaGGTGCTTGGGGCCAGGGGATGGGCCTGCCTCTTCCTGAGCCCC +
Preference number: 1 (lower is better)
Translates to: PRQRQALTARHPLLC*VLGARGWACLFLSP
Trigger: GGGGCTCAGGAAGAGGCAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGTTGCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CATCCTCAGCCCAACCTTGGAGGCCCAGCAGCTGGGGCTGAGAAGTaGGGCCCAGGCAACGCCAGGCCCTCACTGCCCGCCACCCTCTGT +
Preference number: 1 (lower is better)
Translates to: HPQPNLGGPAAGAEK*GPGNARPSLPATLC
Trigger: ACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGTTGCCTGGGCCCCACTTCTCAGCCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp GGAGAGGGGGCCGCTGTGAGCCAGGTGGGCTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCTGGTTCAGGGGAGGCTGACCTCCTC +
Preference number: 1 (lower is better)
Translates to: GEGAAVSQVGFAEEG*CMPQAAGSGEADLL
Trigger: GAGGAGGTCAGCCTCCCCTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGGCAAGGGGCTCACAGCCTGGCCTCTGCAGAGGCCCTTGGGACCTaGCGCCACACGAGGTGCAGCCGAGCTGACAGTGGGGAAGTACAC +
Preference number: 1 (lower is better)
Translates to: RQGAHSLASAEALGT*RHTRCSRADSGEVH
Trigger: GTGTACTTCCCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCTGTGAGCCCCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTCTTTGCCCCGCAGGTTCTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: GGSCSQLTLAPGGGL*PQLPPFFAPQVLGG
Trigger: CCCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp CTTCTGGGCATCTCGGGCACTGCTGCACCGTACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: LLGISGTAAPYCLVR*PSGKATPPRSPRKQ
Trigger: CTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp CTCCAAGCTCCCTCTCCAAGTTCCCGTGGCCCTTGGCCGTGGCCCTaGCCATCGCGGCCCCTTAGATCAACAGGTGGGCATGCATTGTGC +
Preference number: 1 (lower is better)
Translates to: LQAPSPSSRGPWPWP*PSRPLRSTGGHALC
Trigger: GCACAATGCATGCCCACCTGTTGATCTAAGGGGCCGCGATGGTCAGGGCCACGGCCAAGGGCCACGGGAACTTGGAGAGGGAGCTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp AGCCTGGCCTCTGCAGAGGCCCTTGGGACCTGGCGCCACACGAGGTaGAGCCGAGCTGACAGTGGGGAAGTACACATCAGCACTGTGGTT +
Preference number: 1 (lower is better)
Translates to: SLASAEALGTWRHTR*SRADSGEVHISTVV
Trigger: AACCACAGTGCTGATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp CTGGGCCCCGATCAGCCACCGGAAGCTGATGGGTGGGTGGGTTTGTaGCTCTGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACG +
Preference number: 1 (lower is better)
Translates to: LGPDQPPEADGWVGL*LCLSCHRPSTLPET
Trigger: CGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACAGAGGCACAAACCCACCCACCCATCAGCTTCCGGTGGCTGATCGGGGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp AGGAGATGCACGACTGCCAAGTCACCCCCACCCTGCTGTTTCACCTaGTTCCCTCCCTGGGCCCCGATCAGCCACCGGAAGCTGATGGGT +
Preference number: 1 (lower is better)
Translates to: RRCTTAKSPPPCCFT*FPPWAPISHRKLMG
Trigger: ACCCATCAGCTTCCGGTGGCTGATCGGGGCCCAGGGAGGGAAGCAGGTGAAACAGCAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp CGAGGAAGGATGCTGCATGCCTCAGGCAGCTGGTTCAGGGGAGGCTaGCCTCCTCCCAACAGCCTGGAACCACAAGGAGGGCAGGATCCA +
Preference number: 1 (lower is better)
Translates to: RGRMLHASGSWFRGG*PPPNSLEPQGGQDP
Trigger: TGGATCCTGCCCTCCTTGTGGTTCCAGGCTGTTGGGAGGAGGTCAGCCTCCCCTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp TTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGCCTGGAGCCTGTTCCAAAGTGCGAA +
Preference number: 1 (lower is better)
Translates to: FQGLWTPWWPWLGHS*ILSQPGLEPVPKCE
Trigger: TTCGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACGGTCATAGGCAGTGGCGGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: VAVTLNRCHQCLVPA*LQGSVTVIGSGGCR
Trigger: CCTGCAGCCGCCACTGCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
3UTR TCA 90 bp TGGAGAGAGGAGGGGAAGGAAAGAGCTGTGGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCAGCCAAGGCTCAAAGAGGTGCAGGG +
Preference number: 1 (lower is better)
Translates to: WREEGKERAVGWPYR*PCCTKAAKAQRGAG
Trigger: CCCTGCACCTCTTTGAGCCTTGGCTGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCCCCTCCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp TGCAGAGGCCCTTGGGACCTGGCGCCACACGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACATCAGCACTGTGGTTCCCCCATGAAT +
Preference number: 1 (lower is better)
Translates to: CRGPWDLAPHEVQPS*QWGSTHQHCGSPMN
Trigger: ATTCATGGGGGAACCACAGTGCTGATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp TCCATGCCCAGCTGCCTGCTAAGCTCCACGAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTG +
Preference number: 1 (lower is better)
Translates to: SMPSCLLSSTRTGRV*PERMLRSSGCRLFV
Trigger: CACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGGCAGCTGGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTaGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCT +
Preference number: 1 (lower is better)
Translates to: GDGLMGSLAIFRRAG*LSPSIGAISVWCPP
Trigger: AGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCC +
Preference number: 1 (lower is better)
Translates to: AGGRSHGLSGYLQEG*VAVTLNRCHQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR CCA 90 bp TGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAATTGGTGAGAGCGGGCGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: CVLWSHPHQAPRQLR*TTRCCELVRAGVCV
Trigger: CACACACACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AAGGCAAAGAAAGGGAAGTGGGGGACAGCACATGACCTTGGCACCTaGACCCCTGGAGTCAGGGCTGGACCCATGTCCAGGCCTGGTCAG +
Preference number: 1 (lower is better)
Translates to: KAKKGKWGTAHDLGT*TPGVRAGPMSRPGQ
Trigger: CTGACCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCCCCCACTTCCCTTTCTTTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCGAAGGCAAAGAAAGGGAAGTGGGGG +
Preference number: 1 (lower is better)
Translates to: GGPGLGTPAYCHSQA*SLFQSAKAKKGKWG
Trigger: CCCCCACTTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CATCTCGGGCACTGCTGCACCGTACTGTCTGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCA +
Preference number: 1 (lower is better)
Translates to: HLGHCCTVLSGALPE*QGYTTPFTQEAVHS
Trigger: TGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGGGGGTGGCTGGAGCCACTGGCTGCCAAGGCTGGGCAGTCGTTCTaGAGCGTGACTTCTGGTAAATGGATTTCACCCCTCAGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: RGWLEPLAAKAGQSF*SVTSGKWISPLSAL
Trigger: CAGGGCACTGAGGGGTGAAATCCATTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGTGGCTCCAGCCACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGGAGAGCTGGTGTGTGGCTGGGAACCATCAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTGCAGAACTGGCCTCGTAGTGGGGCC +
Preference number: 1 (lower is better)
Translates to: RRAGVWLGTIRAASR*VTRPRLQNWPRSGA
Trigger: GGCCCCACTACGAGGCCAGTTCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCTGATGGTTCCCAGCCACACACCAGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp AGGCTCTGGGCGTGCCCGTTTCTACCCCTGCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCTCTGGGCTCCCATCTCCTCCAAATC +
Preference number: 1 (lower is better)
Translates to: RLWACPFLPLPCWTP*STSLTSLGSHLLQI
Trigger: GATTTGGAGGAGATGGGAGCCCAGAGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAACGGGCACGCCCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp GACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGATGTCCGGTGATGCACCAAGAGTGC +
Preference number: 1 (lower is better)
Translates to: DSSERTCQGHPGQRG*SAIGLRCPVMHQEC
Trigger: GCACTCTTGGTGCATCACCGGACATCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CAGGCCTGGAGCCTGTTCCAAAGTGCGAAGGCAAAGAAAGGGAAGTaGGGGACAGCACATGACCTTGGCACCTGGACCCCTGGAGTCAGG +
Preference number: 1 (lower is better)
Translates to: QAWSLFQSAKAKKGK*GTAHDLGTWTPGVR
Trigger: CCTGACTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCCCCCACTTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTCCAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CTCCATCTTCAAAGCGCAAGACTTGCAAGAGCCCAAGATGAGGCCTaGGAGAGTGGCAGGCTCTGGGCGTGCCCGTTTCTACCCCTGCCT +
Preference number: 1 (lower is better)
Translates to: LHLQSARLARAQDEA*ESGRLWACPFLPLP
Trigger: AGGCAGGGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCAAGTCTTGCGCTTTGAAGATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp CACCCAACTCCATCTTCAAAGCGCAAGACTTGCAAGAGCCCAAGATaGGGCCTGGGAGAGTGGCAGGCTCTGGGCGTGCCCGTTTCTACC +
Preference number: 1 (lower is better)
Translates to: HPTPSSKRKTCKSPR*GLGEWQALGVPVST
Trigger: GGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCAAGTCTTGCGCTTTGAAGATGGAGTTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp TGCCAGGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTaGAGCCAGCTCACCCTGGCTCCTGGAGGTGGACTCTGGCCCCAA +
Preference number: 1 (lower is better)
Translates to: CQVTYLLLPYLTGGS*SQLTLAPGGGLWPQ
Trigger: TTGGGGCCAGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp CCAAAAGTCAGAGCTCGAACACAGGGAAGAAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGT +
Preference number: 1 (lower is better)
Translates to: PKVRARTQGRRPMEK*PRPSATMLVRPRTC
Trigger: ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCTGTGTTCGAGCTCTGACTTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TACATCACCGGAACAGGCTTGCCCAGAATCCACTTGCTGGGGTCCTaGAGGGTGGGTGAAGTGTCCATGGCAGGTGTCCGAAGTGACCTG +
Preference number: 1 (lower is better)
Translates to: YITGTGLPRIHLLGS*RVGEVSMAGVRSDL
Trigger: CAGGTCACTTCGGACACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GAAACAAAGCCGCCAACCTGCAGGCCCCTAGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGCCTGATTGTGGGTCTGGGGGATTTC +
Preference number: 1 (lower is better)
Translates to: ETKPPTCRPLGQASL*VPVLSCLIVGLGDF
Trigger: GAAATCCCCCAGACCCACAATCAGGCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACCTAGGGGCCTGCAGGTTGGCGGCTTTGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp GAGGGAGTAGGGAGAGCCTCAGGCCCCTCCTTGGCTGGGATCAGATaGTCTCCTGCGTCCCATCCAGCCCTCACATTCAAAGTCCACAAT +
Preference number: 1 (lower is better)
Translates to: EGVGRASGPSLAGIR*SPASHPALTFKVHN
Trigger: ATTGTGGACTTTGAATGTGAGGGCTGGATGGGACGCAGGAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGGCTCTCCCTACTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp GCTGCACCAAGGCAGCCAAGGCTCAAAGAGGTGCAGGGTTTTGTCTaGGGTCCCACAGCAAAGACATGTGGCCAGGACCAGGACAAGACC +
Preference number: 1 (lower is better)
Translates to: AAPRQPRLKEVQGFV*GPTAKTCGQDQDKT
Trigger: GGTCTTGTCCTGGTCCTGGCCACATGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTGGCTGCCTTGGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp TTGGTCCAAATATTATTGGGCCTCAGGTGCCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTGCCCCAGATGATCCTCTCACAGCCC +
Preference number: 1 (lower is better)
Translates to: LVQILLGLRCPPPSA*LEVEGLPQMILSQP
Trigger: GGGCTGTGAGAGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp TACTGTCAACTCTCCTCAGGAATAGGAGATGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTTGGGGGTCAGGAGCCCGAGTCCCAG +
Preference number: 1 (lower is better)
Translates to: YCQLSSGIGDVDRPG*QGTPWVGGQEPESQ
Trigger: CTGGGACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCTGTCACCCTGGTCTATCCACATCTCCTATTCCTGAGGAGAGTTGACAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp CTACAGATGACCCTGCTGCACCAAGGCAGCCAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTCCCACAGCAAAGACATGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LQMTLLHQGSQGSKR*RVLSEVPQQRHVAR
Trigger: CCTGGCCACATGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTGGCTGCCTTGGTGCAGCAGGGTCATCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp CCACTTGGTCCAAATATTATTGGGCCTCAGGTGCCCACCCCCATCTaGTTGCTTGGAAGTGGAGGGCCTGCCCCAGATGATCCTCTCACA +
Preference number: 1 (lower is better)
Translates to: PLGPNIIGPQVPTPI*LLGSGGPAPDDPLT
Trigger: TGTGAGAGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTG +
Preference number: 1 (lower is better)
Translates to: QAGWAGAAVICRTVY*FAETQWPSGEAHRL
Trigger: CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CCGCCCCTCCGAGTGTTCTTGTTTCCCACTTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCCCATCTGCTTGCTTGGAAGTGGAGG +
Preference number: 1 (lower is better)
Translates to: PPLRVFLFPTWSKYY*ASGAHPHLLAWKWR
Trigger: CCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGAGAGATGCCAGGTAACATACCTTCTCCTACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGTGGACTCTG +
Preference number: 1 (lower is better)
Translates to: REMPGNIPSPTLPDR*KLQPAHPGSWRWTL
Trigger: CAGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACCTGGCATCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CCTGGAGTCAGGGCTGGACCCATGTCCAGGCCTGGTCAGGGATTATaGCATGGCCTTGAATTGACTCTGATACCCTCTGAACCTCAGGGA +
Preference number: 1 (lower is better)
Translates to: PGVRAGPMSRPGQGL*HGLELTLIPSEPQG
Trigger: TCCCTGAGGTTCAGAGGGTATCAGAGTCAATTCAAGGCCATGCCATAATCCCTGACCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp CTGAAGCAACAAAAGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACAGCTGGAGGACAGGCAGGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: LKQQKQALLPRLGWL*WMDSQTAGGQAGWA
Trigger: AGCCCAGCCTGCCTGTCCTCCAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCTTTTGTTGCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp ATCCCTGGCCTGGGTGACCAGGCTTCCTTGGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGCCCAGAACCATCTCTCACTGCTCTT +
Preference number: 1 (lower is better)
Translates to: IPGLGDQASLAVLTD*LSRAWGPEPSLTAL
Trigger: AAGAGCAGTGAGAGATGGTTCTGGGCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGCCAAGGAAGCCTGGTCACCCAGGCCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTCCGAA +
Preference number: 1 (lower is better)
Translates to: LLSTSPEQACPESTC*GPGGWVKCPWQVSE
Trigger: TTCGGACACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TTCCATTCAGAATTCTCTGGCATCTACTCAACGGCTTGTGTCCTTTaGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACG +
Preference number: 1 (lower is better)
Translates to: FHSEFSGIYSTACVL*SHPHQAPRQLRWTT
Trigger: CGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTTCGCCTCTATGTTGCCGTGAGAGCC +
Preference number: 1 (lower is better)
Translates to: HSHDRSTTRWRENGA*RSENSLRLYVAVRA
Trigger: GGCTCTCACGGCAACATAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp GGATGCTCTGCCATAGGTCTAAGATGTCCGGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGGAGCAGTCTTCTCAGTCGGACCTTC +
Preference number: 1 (lower is better)
Translates to: GCSAIGLRCPVMHQE*EMHHGWSSLLSRTF
Trigger: GAAGGTCCGACTGAGAAGACTGCTCCACCCATGATGCATCTCGCACTCTTGGTGCATCACCGGACATCTTAGACCTATGGCAGAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp AGGGAGAGCCTCAGGCCCCTCCTTGGCTGGGATCAGATGATCTCCTaGGTCCCATCCAGCCCTCACATTCAAAGTCCACAATGTAATCAA +
Preference number: 1 (lower is better)
Translates to: RESLRPLLGWDQMIS*VPSSPHIQSPQCNQ
Trigger: TTGATTACATTGTGGACTTTGAATGTGAGGGCTGGATGGGACGCAGGAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGGCTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TCTCTCTCTGCCCTGGCTCTCTGCCATCCTGGTGACATACAGATATaGGGGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACT +
Preference number: 1 (lower is better)
Translates to: SLSALALCHPGDIQI*GTLSPKKAKPPLIT
Trigger: AGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp CAAATCTGCAACAAAGGACAGGAGGTGAATGAGAAAGGGGGCAATTaGCAGGCATTGGGGCTCACAGGCTGGTGCCCAGTGGGTCAAGTT +
Preference number: 1 (lower is better)
Translates to: QICNKGQEVNEKGGN*QALGLTGWCPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAATGCCTGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGTTGCAGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CTAAGATGTCCGGTGATGCACCAAGAGTGCGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGGACCTTCAGGCCCACAGAAAAGCAA +
Preference number: 1 (lower is better)
Translates to: LRCPVMHQECEMHHG*SSLLSRTFRPTEKQ
Trigger: TTGCTTTTCTGTGGGCCTGAAGGTCCGACTGAGAAGACTGCTCCACCCATGATGCATCTCGCACTCTTGGTGCATCACCGGACATCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGGTCTAAGATGTCCGGTGATGCACCAAGAGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAGTCGGACCTTCAGGCCCACAGAAAA +
Preference number: 1 (lower is better)
Translates to: RSKMSGDAPRVRDAS*VEQSSQSDLQAHRK
Trigger: TTTTCTGTGGGCCTGAAGGTCCGACTGAGAAGACTGCTCCACCCATGATGCATCTCGCACTCTTGGTGCATCACCGGACATCTTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAAACCAATCTGAGGACCAGCAAAGCC +
Preference number: 1 (lower is better)
Translates to: HPCALVLPPGSPGVK*LSHKYKTNLRTSKA
Trigger: GGCTTTGCTGGTCCTCAGATTGGTTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GATGCTGGTGAGGCCCCGGACTTGTGTTTTCCATTCAGAATTCTCTaGCATCTACTCAACGGCTTGTGTCCTTTGGAGCCATCCTCACCA +
Preference number: 1 (lower is better)
Translates to: DAGEAPDLCFPFRIL*HLLNGLCPLEPSSP
Trigger: TGGTGAGGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGGAAAACACAAGTCCGGGGCCTCACCAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GTTGGTTTCCACCCTCCCGGGAAGCTGTATCTTAGACTCCCCTCCTaGGAAGCTGTATTTCAGACTCATCGTGTTTCTAGGGCTGTGTCA +
Preference number: 1 (lower is better)
Translates to: VGFHPPGKLYLRLPS*EAVFQTHRVSRAVS
Trigger: TGACACAGCCCTAGAAACACGATGAGTCTGAAATACAGCTTCCCAGGAGGGGAGTCTAAGATACAGCTTCCCGGGAGGGTGGAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TCAGTCGGACCTTCAGGCCCACAGAAAAGCAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAAAAGCAAGCTCTCCTTCCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: SVGPSGPQKSKKVFT*VLLKQQKQALLPRL
Trigger: CAGCCTGGGAAGGAGAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTTGCTTTTCTGTGGGCCTGAAGGTCCGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TTGATCTGGAAAAGAGCTGCTGATACTGCATCGGTCCCAGAGAAATaGAGGCAGGAAACCAGGACATCTCCCCAAAGTGTGCTCCTCTTG +
Preference number: 1 (lower is better)
Translates to: LIWKRAADTASVPEK*RQETRTSPQSVLLL
Trigger: CAAGAGGAGCACACTTTGGGGAGATGTCCTGGTTTCCTGCCTCCATTTCTCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAGATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp TGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCCTGGCTTaGAGCTCAATTCTGGCTGAATGTCATGAGGAGGGGGTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: CVRVLGWFLRFASLA*SSILAECHEEGVAG
Trigger: TCCAGCCACCCCCTCCTCATGACATTCAGCCAGAATTGAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp TCTGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTCTAC +
Preference number: 1 (lower is better)
Translates to: SAPRGCSEVLAVGCL*SGCGGKSSVLIIVY
Trigger: GTAGACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp AATCTGCATTTCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTaGAAAACCAGGGCAGCGTCTTCCAGCAGGAGTCAGGGCAAACCC +
Preference number: 1 (lower is better)
Translates to: NLHFYKYSMSKATRG*KTRAASSSRSQGKP
Trigger: GGGTTTGCCCTGACTCCTGCTGGAAGACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGAAATGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp ATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTaGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCAC +
Preference number: 1 (lower is better)
Translates to: IGLQRPSGHREKLID*LLEIDKHPEVQRPH
Trigger: GTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp ATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAGGAATTAAGGCCCCAGGTAAAGAGA +
Preference number: 1 (lower is better)
Translates to: IQPRFGQGLYLAVLT*QERLCKELRPQVKR
Trigger: TCTCTTTACCTGGGGCCTTAATTCCTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTaGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTCTACATCAC +
Preference number: 1 (lower is better)
Translates to: PERMLRSSGCRLFVI*VWGKVLCVNYCLHH
Trigger: GTGATGTAGACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp TCCCAGACAGTTTTCTTTGAGTTCTTTGATCTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGAGAAATGGAGGCAGGAAACCAGGAC +
Preference number: 1 (lower is better)
Translates to: SQTVFFEFFDLEKSC*YCIGPREMEAGNQD
Trigger: GTCCTGGTTTCCTGCCTCCATTTCTCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp TTGCTCAGGGGTCTAAGATGTGGGAACAAGAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACCCATCTTGGAGATGAGCTAAAGGGG +
Preference number: 1 (lower is better)
Translates to: LLRGLRCGNKNFWAF*MVATFTHLGDELKG
Trigger: CCCCTTTAGCTCATCTCCAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATTCTTGTTCCCACATCTTAGACCCCTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp AGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAAC +
Preference number: 1 (lower is better)
Translates to: RMLRSSGCRLFVIWV*GKVLCVNYCLHHRN
Trigger: GTTCCGGTGATGTAGACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGACAA +
Preference number: 1 (lower is better)
Translates to: AAVICRTVYWFAETQ*PSGEAHRLAFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp GGACAGCTGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAAC +
Preference number: 1 (lower is better)
Translates to: GQLGKSLDETSEALL*IWSKTPQVSMFLGN
Trigger: GTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CTGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTaGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAAGCC +
Preference number: 1 (lower is better)
Translates to: LGKSLDETSEALLWI*SKTPQVSMFLGNKA
Trigger: GGCTTTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 90 bp CTGTATTTCAGACTCATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTaGTTGGTTTTTAAGATTTGCTTCCCTGGCTTGGAGCTCAATTCT +
Preference number: 1 (lower is better)
Translates to: LYFRLIVFLGLCQGA*LVFKICFPGLELNS
Trigger: AGAATTGAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGATGAGTCTGAAATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 90 bp AATGCATGTGTCTTCCTGGCAAAGGTTTCCATTTGCAATGTAATCTaGATTTCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAA +
Preference number: 1 (lower is better)
Translates to: NACVFLAKVSICNVI*ISTNTQCPRPLEGE
Trigger: TTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGAAATGCAGATTACATTGCAAATGGAAACCTTTGCCAGGAAGACACATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 90 bp AATGTAATCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTaGGGAATCTCCCAGACAGTTTTCTTTGAGTTCTTTGATCTGGAA +
Preference number: 1 (lower is better)
Translates to: NVINTSDDILLRKSS*GISQTVFFEFFDLE
Trigger: TTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 2 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSCMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVCMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGSSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTCCCCATCTGCTTGCTTaGAAGTGGAGGGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVPHLLA*KWRACP
Trigger: GGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGG...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CTGGGAGAGTGGCAGGCTCTGGGCGTGCCCGTTTCTACCCCTGCCTaGCTGGACACCCTGAAGCACATCTCTCACCTCTCTGGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: LGEWQALGVPVSTPA*LDTLKHISHLSGLP
Trigger: TGGGAGCCCAGAGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAACCTGCCTGGCCTGCTaGTCCCAAGTCCAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGTCLAC*SQVQSL
Trigger: GAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGT...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 2 (lower is better)
Translates to: QAPRQLRWTTRCCELVRACMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTCCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTG +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVPESTC*GPGGWV
Trigger: CACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCGGGAACACCATGGGTTaGGGGTCAGGAGCCCGAGTC +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGGNTMG*GSGARV
Trigger: GACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCC...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGCCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGCACCCTAGCCCACAGTaGGTTCTCCAAGCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLHPSPQ*VLQAPS
Trigger: AGAGGGAGCTTGGAGAACTCACTGTGGGCTAGGGTG...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCACCTGCCTGGCCTGCTaGTCCCAAGTCCAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGTCLAC*SQVQSL
Trigger: GAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 2 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGCAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTCATCTCCCCAAAGTGTaGTCCTCTTGGAGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVHLPKV*SSWRGA
Trigger: GGCCCCTCTCCAAGAGGAGCACACTTTGGGGAGATG...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTACTACCTCCCTTCTTTaGCCCGCAGGTTCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVTTSLL*PAGSGW
Trigger: CCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGT...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVWLGHS*ILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: ELQASGGCWGTVSWALWLGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACCTCAGGCCCCTCCTTaGCTGGGATCAGATGATCTC +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGPQAPP*LGSDDL
Trigger: GAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCGTGCCTGCCTGCTCCTaGCCGGCAGCTCATTTCAGA +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGVPACS*PAAHFR
Trigger: TCTGAAATGAGCTGCCGGCCAGGAGCAGGCAGGCAC...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CAGGAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAAGGGTCAGTGACGGTCATAGGCAGT +
Preference number: 2 (lower is better)
Translates to: QEGWVAVTLNRCHQC*VPAWLQGSVTVIGS
Trigger: ACTGCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
3UTR-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 2 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 2 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGATTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCAGCAAAGCCTCAGGTaGGGGAGGAAAGGTATGGGG +
Preference number: 2 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCQQSLR*GRKGMG
Trigger: CCCCATACCTTTCCTCCCTCACCTGAGGCTTTGCTG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLSSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTCACCGGAACAGGCTTaGCCAGAATCCACTTGCTGG +
Preference number: 2 (lower is better)
Translates to: QAPRQLRWTTRCCELVRASPEQA*PESTCW
Trigger: CCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTCTGCCCCGAGAGGATaGTCAGAAGTTCTGGCTGTA +
Preference number: 2 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSSAPRG*SEVLAV
Trigger: TACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLRTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGTGAGAACATCCGTGTaGATCCATGTGCGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: LHRTVWCAARVARLHHPVVRTSV*IHVRLC
Trigger: GCACAAGCGCACATGGATGCACACGGATGTTCTCAC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGACAGGCTGGTGCCTaGCTGCTCCTGGCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRRQAGA*LLLAGS
Trigger: GCTGCCGGCCAGGAGCAGGCAGGCACCAGCCTGTCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 2 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGGGATTTCTAGGGAATaGGGGTGGGGGAGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGGISRE*GWGSVF
Trigger: AAAGACACTCCCCCACCCCCATTCCCTAGAAATCCC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 2 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377840.6
3UTR CAA 90 bp ATGCTTTTGGAGAAGATGAGGGACGTGGCCACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGCGGCCATAGCCACAGGGTCACAGGG +
Preference number: 2 (lower is better)
Translates to: MLLEKMRDVATGMVI*GTRATSGHSHRVTG
Trigger: CCCTGTGACCCTGTGGCTATGGCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 2 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 2 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGSSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACG +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLRPMEK*PRPSAT
Trigger: CGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 2 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 2 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAVRDAS*VEQSSQ
Trigger: CTGAGAAGACTGCTCCACCCATGATGCATCTCGCAC...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 2 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCCTGGCTCCTGGAGGTaGACTCTGGCCCCAACTACC +
Preference number: 2 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDPGSWR*TLAPTT
Trigger: GGTAGTTGGGGCCAGAGTCCACCTCCAGGAGCCAGG...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCCTGGAGTCAGGGCTaGACCCATGTCCAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPWSQG*THVQAW
Trigger: CCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTGGCACCTGGACCCCTaGAGTCAGGGCTGGACCCAT +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLWHLDP*SQGWTH
Trigger: ATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp ACCCTGCTGCACCAAGGCAGCCAAGGCTCAAAGAGGTGCAGGGTTTaGTCTGAGGTCCCACAGCAAAGACATGTGGCCAGGACCAGGACA +
Preference number: 2 (lower is better)
Translates to: TLLHQGSQGSKRCRV*SEVPQQRHVARTRT
Trigger: TGTCCTGGTCCTGGCCACATGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTGGCTGCCTTGGTGCAGCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CTTGGTCCAAATATTATTGGGCCTCAGGTGCCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCTGCCCCAGATGATCCTCTCACAGCC +
Preference number: 2 (lower is better)
Translates to: LGPNIIGPQVPTPIC*LGSGGPAPDDPLTA
Trigger: GGCTGTGAGAGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACACCGTTCCAGGGGCTaGGGGAGTAGGGAGAGCCTC +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEHRSRG*GSRESL
Trigger: GAGGCTCTCCCTACTCCCTCAGCCCCTGGAACGGTG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGTTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTCTGCCACGATGCTGGTaGGGCCCCGGACTTGTGTTT +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLLPRCW*GPGLVF
Trigger: AAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAG...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGACTCTGATACCCTCTaGACCTCAGGGACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLDSDTL*TSGTAG
Trigger: CCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 2 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGRQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 2 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 2 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: QAPRQLRWTTRCCELVRASHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCCCCATCTGCTTGCTTGGAAGTGGAG +
Preference number: 2 (lower is better)
Translates to: PAPPSVLVSHLVQIL*GLRCPPPSACLEVE
Trigger: CTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTCTACCTGGCTGTTCTaGCTTGACAAGAGAGACTAT +
Preference number: 2 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSSTWLF*LDKRDY
Trigger: ATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGA...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCAGGACTCCACCTTGCTaGGCCTTAGTTTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGRTPPC*ALVFSS
Trigger: AGAAGAGAAAACTAAGGCTCAGCAAGGTGGAGTCCT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLGAVNW*ERACVC
Trigger: ACACACACACGCCCGCTCTCACCAATTCACAGCACC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 2 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 2 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEHRTVW*AARVAR
Trigger: CCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGGGCATCTCGGGCACTaGTGCACCGTACTGTCTGGT +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRGHLGH*CTVLSG
Trigger: ACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 2 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPEMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCATGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLTLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGCCTCAGGTGCCCACCCCCATCTGCT +
Preference number: 2 (lower is better)
Translates to: QALLIPAPPSVLVSH*VQILLGLRCPPPSA
Trigger: AGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACAT +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGREVQPS*QWGSTH
Trigger: ATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 2 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 2 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCSSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 2 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKRTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTCCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 2 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 2 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTGTGGGATCCACCCATaGCTGCCTGGGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRCGIHP*LPGPGL
Trigger: CAGGCCAGGCCCAGGCAGGCATGGGTGGATCCCACA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 2 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTTGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLTLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGAGGGAGGAAAGGTATaGGGGGAGCTCATTACAGGG +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLEGGKV*GELITG
Trigger: CCCTGTAATGAGCTCCCCCCATACCTTTCCTCCCTC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGGAGCACAACTCGGTaGAGAGAGAATGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRRSTTR*RENGAW
Trigger: CCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGATTGGGGCTCACAGGCTaGTGCCCAGTGGGTCAAGTT +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRLGLTG*CPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAA...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 2 (lower is better)
Translates to: MRDVATGMVILGTRATSGYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp GCCCTGGCTCTCTGCCATCCTGGTGACATACAGATATGGGGGACATaGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAG +
Preference number: 2 (lower is better)
Translates to: ALALCHPGDIQIWGT*SPKKAKPPLITVIQ
Trigger: CTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCAGAGAGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp TTTCCATTCAGAATTCTCTGGCATCTACTCAACGGCTTGTGTCCTTaGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCAC +
Preference number: 2 (lower is better)
Translates to: FPFRILWHLLNGLCP*EPSSPSSQAAPLDH
Trigger: GTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp GGACCCATGTCCAGGCCTGGTCAGGGATTATGGCATGGCCTTGAATaGACTCTGATACCCTCTGAACCTCAGGGACAGCTGGGAAAGAGT +
Preference number: 2 (lower is better)
Translates to: GPMSRPGQGLWHGLE*TLIPSEPQGQLGKS
Trigger: ACTCTTTCCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTCAATTCAAGGCCATGCCATAATCCCTGACCAGGCCTGGACATGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLRLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAAGGACTCCACCTTGCTaGGCCTTAGTTTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: CENIRVHPCALVLPPGSPRTPPC*ALVFSS
Trigger: AGAAGAGAAAACTAAGGCTCAGCAAGGTGGAGTCCT...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTERLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 2 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 2 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 2 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGAGATGATGGCACCTaGCACCCCCATGTCAAAATC +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLRDDGT*HPHVKI
Trigger: GATTTTGACATGGGGGTGCCAGGTGCCATCATCTCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATTCTTGTTTCCCACTTaGTCCAAATATTATTGGGCC +
Preference number: 2 (lower is better)
Translates to: TLVALAWALLHTVTARPGFLFPT*SKYYWA
Trigger: GGCCCAATAATATTTGGACCAAGTGGGAAACAAGAA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGCAGCCAGCTCACCCTaGCTCCTGGAGGTGGACTCT +
Preference number: 2 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKAASSP*LLEVDS
Trigger: AGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCG +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFGALPE*QGYTTP
Trigger: CGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp TTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTC +
Preference number: 2 (lower is better)
Translates to: LIIVYITGTGLPRIH*LGSWRVGEVSMAGV
Trigger: GACACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACCAATCTGAGGACCAGCAAAGCCTCA +
Preference number: 2 (lower is better)
Translates to: PCALVLPPGSPGVKW*SHKYKTNLRTSKAS
Trigger: TGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGC +
Preference number: 2 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHAVLTD*LSRAWG
Trigger: GCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGC...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 2 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 2 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATCTGCCCTGGCTCTCTaGCATCCTGGTGACATACAG +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTESALAL*HPGDIQ
Trigger: CTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 2 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: AGAAVICRTVYWFAETQWCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 2 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATTCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDSHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCAGGCTGGTGCCCAGTaGGTCAAGTTTGGCCCATGG +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRQAGAQ*VKFGPW
Trigger: CCATGGGCCAAACTTGACCCACTGGGCACCAGCCTG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp GACTTGTGTTTTCCATTCAGAATTCTCTGGCATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: DLCFPFRILWHLLNG*CPLEPSSPSSQAAP
Trigger: CGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGGAAAACACAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRCAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGA +
Preference number: 2 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSPGQRG*SAIGLR
Trigger: TCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGG...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 2 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRRQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
3UTR-3UTR CCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 2 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGGAAGGAAAGAGCTGTaGGGTGGCCCTACAGATGAC +
Preference number: 2 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKGRKEL*GGPTDD
Trigger: GTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTAAAGGAAAGACAGGCTaGTGCCTGCCTGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRKGKTG*CLPAPG
Trigger: GCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCCTTT...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTCTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAG +
Preference number: 2 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGLAVLT*QERLCK
Trigger: CTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAG...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCT +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRPCWTP*STSLTS
Trigger: AGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 2 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFCPEST*WGPGGW
Trigger: CCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGTCAAGTTTGGCCCATaGACATTTTTCTTTAGGCCG +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLVKFGP*TFFFRP
Trigger: CGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGAC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTCCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAAGGAATTAAGGCCCCAGGTAAAGAG +
Preference number: 2 (lower is better)
Translates to: HSAQVWTRALPGCSD*TRETMQGIKAPGKE
Trigger: CTCTTTACCTGGGGCCTTAATTCCTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp GTCTGCTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTGCTGTTTCTGAGTTTCAAGTATGTC +
Preference number: 2 (lower is better)
Translates to: VCSPSLTQVEDSRQE*AWGDSVLFLSFKYV
Trigger: GACATACTTGAAACTCAGAAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 2 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKRLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTCTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTAATCAATACCTCGGATaGCATTCTGCTTCGGAAAAG +
Preference number: 2 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPNQYLG*HSASEK
Trigger: CTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 2 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTTGGTTTTTAAGATTTaGTTCCCTGGCTTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLLVFKI*FPGLEL
Trigger: GAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCAAAGTGTGCTCCTCTTaGAGAGGGGCCTCAGGGGGA +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFKVCSS*RGASGG
Trigger: TCCCCCTGAGGCCCCTCTCCAAGAGGAGCACACTTT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGCAGGATCCAAAGATGTaGGTACACATCATTCCAAAA +
Preference number: 2 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLQDPKM*VHIIPK
Trigger: TTTTGGAATGATGTGTACCCACATCTTTGGATCCTG...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAA +
Preference number: 2 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDSPGVK*LSHKYK
Trigger: TTTGTATTTGTGAGACAACCACTTGACTCCTGGGCT...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGC +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFGQASL*VPVLSC
Trigger: GCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp TATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCA +
Preference number: 2 (lower is better)
Translates to: YWFAETQWPSGEAHR*AFRNRQASRSPTAP
Trigger: TGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTENTKPI*GPAKPQ
Trigger: CTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAACCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 2 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFFAEEG*CMPQAA
Trigger: AGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGATTTCACCCCTCAGTaGCCTGTGGCCACATCTGAG +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFDFTPQ*PVATSE
Trigger: CTCAGATGTGGCCACAGGGCACTGAGGGGTGAAATC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGATTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 2 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGACTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 2 (lower is better)
Translates to: SIPRMTFCFGKVAEESPREMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp CAGGGACAGCTGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTaGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: QGQLGKSLDETSEAL*WIWSKTPQVSMFLG
Trigger: TCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCTGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTCTGCCCCGAGAGGATaGTCAGAAGTTCTGGCTGTA +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFSAPRG*SEVLAV
Trigger: TACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAATTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 2 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 90 bp TATTTCAGACTCATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTaGGTTTTTAAGATTTGCTTCCCTGGCTTGGAGCTCAATTCTGGC +
Preference number: 2 (lower is better)
Translates to: YFRLIVFLGLCQGAW*VFKICFPGLELNSG
Trigger: GCCAGAATTGAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGATGAGTCTGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAATCAAGAAGTCTGTGCTaGAGACCCCTGACCCCACCA +
Preference number: 2 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQSRSLC*RPLTPP
Trigger: TGGTGGGGTCAGGGGTCTTCAGCACAGACTTCTTGA...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGCCTCTATGTTGCCGTaGGAGCCCCAAATGTCAATT +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFASMLP*EPQMSI
Trigger: AATTGACATTTGGGGCTCTCACGGCAACATAGAGGC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR TCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCCTTTGAGGCTTTGCTaGTTGTCCCTCAGTAGATAT +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRPLRLC*LSLSRY
Trigger: ATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: LTFKVHNVINTSDDILLRVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
3UTR-3UTR GCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRRQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCACTTCGCCTCTATGTTaGCGTGAGAGCCCCAAATGT +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFTSPLC*RESPKC
Trigger: ACATTTGGGGCTCTCACGGCAACATAGAGGCGAAGT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQTLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 2 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCC +
Preference number: 2 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFVTSGK*ISPLSA
Trigger: GGCACTGAGGGGTGAAATCCATTTACCAGAAGTCAC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGACCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 2 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 2 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTT +
Preference number: 2 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQRENGA*RSENSL
Trigger: AAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CGCCAGGCCCTCACTGCCCGCCACCCTCTGTTGTGCTaGGTGCTTGGGGCCAGGGGATGGGCCTGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: RQALTARHPLLC*VLGARGWACLF
Trigger: GAAGAGGCAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GCTCACAGCCTGGCCTCTGCAGAGGCCCTTGGGACCTaGCGCCACACGAGGTGCAGCCGAGCTGACAGTGGG +
Preference number: 3 (lower is better)
Translates to: AHSLASAEALGT*RHTRCSRADSG
Trigger: CCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCTGTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp ATGGGGAGAGGGGGCCGCTGTGAGCCAGGTGGGCTTTaGCGAGGAAGGATGCTGCATGCCTCAGGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: MGRGGRCEPGGL*RGRMLHASGSW
Trigger: CCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTCCCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GGGGGCAGGCACACTTCTGGGCATCTCGGGCACTGCTaGACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAA +
Preference number: 3 (lower is better)
Translates to: GGRHTSGHLGHC*TVLSGALPEWQ
Trigger: TTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCCAGAAGTGTGCCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CCCTCTCCAAGTTCCCGTGGCCCTTGGCCGTGGCCCTaGCCATCGCGGCCCCTTAGATCAACAGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: PSPSSRGPWPWP*PSRPLRSTGGH
Trigger: ATGCCCACCTGTTGATCTAAGGGGCCGCGATGGTCAGGGCCACGGCCAAGGGCCACGGGAACTTGGAGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GCCGCTGTGAGCCAGGTGGGCTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCTGGTTCAGGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: AAVSQVGFAEEG*CMPQAAGSGEA
Trigger: AGCCTCCCCTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTCACAGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp ATCTCGGGCACTGCTGCACCGTACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACACCACCCCGTTCACCC +
Preference number: 3 (lower is better)
Translates to: ISGTAAPYCLVR*PSGKATPPRSP
Trigger: GGGTGAACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTGCCCGAGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp TGGGCATCTCGGGCACTGCTGCACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGGCTACACCACCCCGTT +
Preference number: 3 (lower is better)
Translates to: WASRALLHRTVW*AARVARLHHPV
Trigger: AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCAGGGAACACCATGGGTaGGGGGTCAGGAGCCCGAGT +
Preference number: 3 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSREHHG*GVRSPS
Trigger: ACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp CTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGCCTGGAGCCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: LWTPWWPWLGHS*ILSQPGLEPVP
Trigger: TGGAACAGGCTCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp CTCTTCCTGAGCCCCGGGACAGGCTGCTGCCGGGTCTaGTCACCTTCTCTGACCCAAGTCGAAGACAGCAGG +
Preference number: 3 (lower is better)
Translates to: LFLSPGTGCCRV*SPSLTQVEDSR
Trigger: CCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGGGCTCAGGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LQASGGCWGTVS*ALWLSSGGLGG
Trigger: GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp TGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAATTGGTGAGAGCGGGC +
Preference number: 3 (lower is better)
Translates to: WSHPHQAPRQLR*TTRCCELVRAG
Trigger: GCCCGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTaGCTTGGGCACTCCTGCATACTGTCACAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LCFQGLWTPWWP*LGHSCILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CACTGCTGCACCGTACTGTCTGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCGTTCACCCAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: HCCTVLSGALPE*QGYTTPFTQEA
Trigger: TGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CAAGACTGCAGAACTGGCCTCGTAGTGGGGCCACCGTaGAGCCGGTCTAGCTCAGAGCCCTGTGGGATCCAC +
Preference number: 3 (lower is better)
Translates to: QDCRTGLVVGPP*SRSSSEPCGIH
Trigger: GTGGATCCCACAGGGCTCTGAGCTAGACCGGCTCCACGGTGGCCCCACTACGAGGCCAGTTCTGCAGTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLPPSAC*EVEGLP
Trigger: GGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: QAPRQLRWTTRCCELVRARCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
3UTR-3UTR CAA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: TLVALAWALLHTVTARPGNYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CCTTGGGACCTGGCGCCACACGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACATCAGCACTGTGGTTCC +
Preference number: 3 (lower is better)
Translates to: PWDLAPHEVQPS*QWGSTHQHCGS
Trigger: GGAACCACAGTGCTGATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCAGGTCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GTGTGCTCCTCTTGGAGAGGGGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTGAGACTCCTCGTAAAG +
Preference number: 3 (lower is better)
Translates to: VCSSWRGASGGA*STTSPVRLLVK
Trigger: CTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGCCCCTCTCCAAGAGGAGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp CTGCCAGGCCTCAGAGTCGGGGAGGAGATGCACGACTaGCAAGTCACCCCCACCCTGCTGTTTCACCTGCTT +
Preference number: 3 (lower is better)
Translates to: LPGLRVGEEMHD*QVTPTLLFHLL
Trigger: AAGCAGGTGAAACAGCAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCTCCCCGACTCTGAGGCCTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CCGCCAACCTGCAGGCCCCTAGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGCCTGATTGTGGGTCTG +
Preference number: 3 (lower is better)
Translates to: PPTCRPLGQASL*VPVLSCLIVGL
Trigger: CAGACCCACAATCAGGCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACCTAGGGGCCTGCAGGTTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp GGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGTGAGAACATCCGTGTG +
Preference number: 3 (lower is better)
Translates to: GSSAGPRGAVNW*ERACVCENIRV
Trigger: CACACGGATGTTCTCACACACACACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp AGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTaGATTGGTGAGAGCGGGCGTGTGTGTGTGAGAACA +
Preference number: 3 (lower is better)
Translates to: SSQAAPLDHEVL*IGESGRVCVRT
Trigger: TGTTCTCACACACACACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp GCGTGCCCGTTTCTACCCCTGCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCTCTGGGCTCCCATCTC +
Preference number: 3 (lower is better)
Translates to: ACPFLPLPCWTP*STSLTSLGSHL
Trigger: GAGATGGGAGCCCAGAGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAACGGGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGATGTCCGGTGATGCAC +
Preference number: 3 (lower is better)
Translates to: ERTCQGHPGQRG*SAIGLRCPVMH
Trigger: GTGCATCACCGGACATCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp AGAGCTCGAACACAGGGAAGAAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: RARTQGRRPMEK*PRPSATMLVRP
Trigger: GGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCTGTGTTCGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGATCACCGGAACAGGCTaGCCCAGAATCCACTTGCTG +
Preference number: 3 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAITGTG*PRIHLL
Trigger: CAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGAT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCC +
Preference number: 3 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLVQIL*GLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 3 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377840.6
3UTR TCA 72 bp GGGAGAGCCTCAGGCCCCTCCTTGGCTGGGATCAGATaGTCTCCTGCGTCCCATCCAGCCCTCACATTCAAA +
Preference number: 3 (lower is better)
Translates to: GRASGPSLAGIR*SPASHPALTFK
Trigger: TTTGAATGTGAGGGCTGGATGGGACGCAGGAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGGCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CCGGGACAGGCTGCTGCCGGGTCTGCTCACCTTCTCTaGCCCAAGTCGAAGACAGCAGGCAAGAATTGGCAT +
Preference number: 3 (lower is better)
Translates to: PGQAAAGSAHLL*PKSKTAGKNWH
Trigger: ATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GGGAAGAAGGCCCATGGAGAAATGCCCCAGGCCTTCTaGCACGATGCTGGTGAGGCCCCGGACTTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: GKKAHGEMPQAF*HDAGEAPDLCF
Trigger: AAAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CAAAGACATGTGGCCAGGACCAGGACAAGACCTGCCTaGCCTGCTGATCCCAAGTCCAGTCTCTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: QRHVARTRTRPA*PADPKSSLSLP
Trigger: GGGCAGAGAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGTCTTGTCCTGGTCCTGGCCACATGTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GCAGGGTTTTGTCTGAGGTCCCACAGCAAAGACATGTaGCCAGGACCAGGACAAGACCTGCCTGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: AGFCLRSHSKDM*PGPGQDLPGLL
Trigger: CAGCAGGCCAGGCAGGTCTTGTCCTGGTCCTGGCCACATGTCTTTGCTGTGGGACCTCAGACAAAACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GGTGTGTGGCTGGGAACCATCAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTGCAGAACTGGCCTCGT +
Preference number: 3 (lower is better)
Translates to: GVWLGTIRAASR*VTRPRLQNWPR
Trigger: ACGAGGCCAGTTCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCTGATGGTTCCCAGCCACACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp ACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACGGTCATAGGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: TLNRCHQCLVPA*LQGSVTVIGSG
Trigger: GCCACTGCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
3UTR-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCACAGGTGGGCATGCATaGTGCGAAATTAGGCATCTG +
Preference number: 3 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSTGGHA*CEIRHL
Trigger: CAGATGCCTAATTTCGCACAATGCATGCCCACCTGT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAATCACCGGAACAGGCTaGCCCAGAATCCACTTGCTG +
Preference number: 3 (lower is better)
Translates to: CENIRVHPCALVLPPGSPITGTG*PRIHLL
Trigger: CAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGAT...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTCCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAA +
Preference number: 3 (lower is better)
Translates to: LHRTVWCAARVARLHHPVPGCSD*TRETMQ
Trigger: TTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGG...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCT +
Preference number: 3 (lower is better)
Translates to: MRDVATGMVILGTRATSGPSGSS*AHGHFS
Trigger: AGAAAAATGTCCATGGGCCAAACTTGACCCACTGGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CACTGGCTGCCAAGGCTGGGCAGTCGTTCTGGAGCGTaGCTTCTGGTAAATGGATTTCACCCCTCAGTGCCC +
Preference number: 3 (lower is better)
Translates to: HWLPRLGSRSGA*LLVNGFHPSVP
Trigger: GGGCACTGAGGGGTGAAATCCATTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp TGTGGCTGGGAACCATCAGAGCAGCCTCTCGATGGGTaGCAAGGCCAAGACTGCAGAACTGGCCTCGTAGTG +
Preference number: 3 (lower is better)
Translates to: CGWEPSEQPLDG*QGQDCRTGLVV
Trigger: CACTACGAGGCCAGTTCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCTGATGGTTCCCAGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp TCTACATCACCGGAACAGGCTTGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGG +
Preference number: 3 (lower is better)
Translates to: STSPEQACPEST*WGPGGWVKCPW
Trigger: CCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGATGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp ATATTATTGGGCCTCAGGTGCCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTGCCCCAGATGATCCTC +
Preference number: 3 (lower is better)
Translates to: ILLGLRCPPPSA*LEVEGLPQMIL
Trigger: GAGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGT +
Preference number: 3 (lower is better)
Translates to: RSHGLSGYLQEG*VAVTLNRCHQC
Trigger: ACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR CCA 72 bp CCGGTGATGCACCAAGAGTGCGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGGACCTTCAGGCCCACA +
Preference number: 3 (lower is better)
Translates to: PVMHQECEMHHG*SSLLSRTFRPT
Trigger: TGTGGGCCTGAAGGTCCGACTGAGAAGACTGCTCCACCCATGATGCATCTCGCACTCTTGGTGCATCACCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCGAAGGCAAAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: GLGTPAYCHSQA*SLFQSAKAKKG
Trigger: CCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACTTGAGGACTCCACCTaGCTGAGCCTTAGTTTTCTC +
Preference number: 3 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGLEDST*LSLSFL
Trigger: GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAGGACAGCACATGACCTaGGCACCTGGACCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEGQHMT*APGPLE
Trigger: CTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCC...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp TGGGTGAAGTGTCCATGGCAGGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGAAAACACCGTTCCAGG +
Preference number: 3 (lower is better)
Translates to: WVKCPWQVSEVT*TWACLRKHRSR
Trigger: CCTGGAACGGTGTTTTCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCCATGGACACTTCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp CCAAATATTATTGGGCCTCAGGTGCCCACCCCCATCTaGTTGCTTGGAAGTGGAGGGCCTGCCCCAGATGAT +
Preference number: 3 (lower is better)
Translates to: PNIIGPQVPTPI*LLGSGGPAPDD
Trigger: ATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp TGTGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTaGTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: CVRTSVCIHVRL*FRLAAQESSGC
Trigger: ACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTaGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGG +
Preference number: 3 (lower is better)
Translates to: LMGSLAIFRRAG*LSPSIGAISVW
Trigger: CCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR CCA 72 bp TGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCT +
Preference number: 3 (lower is better)
Translates to: WAGAAVICRTVY*FAETQWPSGEA
Trigger: AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GCCCTGGCTCTCTGCCATCCTGGTGACATACAGATATaGGGGACATTGTCACCTAAGAAGGCCAAGCCCCCT +
Preference number: 3 (lower is better)
Translates to: ALALCHPGDIQI*GTLSPKKAKPP
Trigger: AGGGGGCTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCAGAGAGCCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GCTGGGCAGTCGTTCTGGAGCGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCCCTGTGGCCACATCTG +
Preference number: 3 (lower is better)
Translates to: AGQSFWSVTSGK*ISPLSALWPHL
Trigger: CAGATGTGGCCACAGGGCACTGAGGGGTGAAATCCATTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTELPRIH*LGSWRV
Trigger: CACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCTTGGGAAAGGGATGTaGGGTTTGATATATCATCCA +
Preference number: 3 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLGKGM*GLIYHP
Trigger: TGGATGATATATCAAACCCAACATCCCTTTCCCAAG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CTGGGTGACCAGGCTTCCTTGGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGCCCAGAACCATCTCTC +
Preference number: 3 (lower is better)
Translates to: LGDQASLAVLTD*LSRAWGPEPSL
Trigger: GAGAGATGGTTCTGGGCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGCCAAGGAAGCCTGGTCACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp TCAATCCTGGGGTGCCCAGGAACGGAGCCTCAGTGCTaGGGAATTACCAGAAAAGGAAAGACAGGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: SILGCPGTEPQC*GITRKGKTGWC
Trigger: GCACCAGCCTGTCTTTCCTTTTCTGGTAATTCCTCAGCACTGAGGCTCCGTTCCTGGGCACCCCAGGATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp ACCCTGCTGCACCAAGGCAGCCAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTCCCACAGCAAAGACAT +
Preference number: 3 (lower is better)
Translates to: TLLHQGSQGSKR*RVLSEVPQQRH
Trigger: ATGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTGGCTGCCTTGGTGCAGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GTTTCCCACTTGGTCCAAATATTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGCTTGGAAGTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: VSHLVQILLGLR*PPPSACLEVEG
Trigger: GCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTaGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATA +
Preference number: 3 (lower is better)
Translates to: HPCASMCACASA*QPRSQVVVSQI
Trigger: TATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 3 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CAAAAGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACAGCTGGAGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: QKQALLPRLGWL*WMDSQTAGGQA
Trigger: TGCCTGTCCTCCAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTATGTTGCCGTGAGAGC +
Preference number: 3 (lower is better)
Translates to: HNSVEREWGLEI*EFTSPLCCRES
Trigger: GCTCTCACGGCAACATAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGCTGTTCTGACTTGACA +
Preference number: 3 (lower is better)
Translates to: QAPSHHCHSAQV*TRALPGCSDLT
Trigger: TGTCAAGTCAGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GCGCTTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAAACCAATCTGAGGACC +
Preference number: 3 (lower is better)
Translates to: ALVLPPGSPGVK*LSHKYKTNLRT
Trigger: GGTCCTCAGATTGGTTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTTCGCCTCTATGTTGCC +
Preference number: 3 (lower is better)
Translates to: DRSTTRWRENGA*RSENSLRLYVA
Trigger: GGCAACATAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: TLVALAWALLHTVTARPGFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CCCATCTCCTCCAAATCTGCAACAAAGGACAGGAGGTaGATGAGAAAGGGGGCAATTGACAGGCATTGGGGC +
Preference number: 3 (lower is better)
Translates to: PISSKSATKDRR*MRKGAIDRHWG
Trigger: GCCCCAATGCCTGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGTTGCAGATTTGGAGGAGATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GCCATAGGTCTAAGATGTCCGGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGGAGCAGTCTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: AIGLRCPVMHQE*EMHHGWSSLLS
Trigger: ACTGAGAAGACTGCTCCACCCATGATGCATCTCGCACTCTTGGTGCATCACCGGACATCTTAGACCTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCCCAGACAGTTTTCTTaGAGTTCTTTGATCTGGAAA +
Preference number: 3 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCPRQFS*SSLIWK
Trigger: TTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGGTGAGGCCCCGGACTaGTGTTTTCCATTCAGAATT +
Preference number: 3 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRGEAPD*CFPFRI
Trigger: AATTCTGAATGGAAAACACAAGTCCGGGGCCTCACC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 3 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 3 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 3 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp TCTCCTCCAAATCTGCAACAAAGGACAGGAGGTGAATaGGAAAGGGGGCAATTGACAGGCATTGGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: SPPNLQQRTGGE*ERGQLTGIGAH
Trigger: GTGAGCCCCAATGCCTGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGTTGCAGATTTGGAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 3 (lower is better)
Translates to: GLQRPSGHREKLIDWLLELQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAATGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 3 (lower is better)
Translates to: VICRTVYWFAETQWPSGEWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 3 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 3 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 3 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRNYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACC +
Preference number: 3 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPGVKW*SHKYKT
Trigger: GGTTTTGTATTTGTGAGACAACCACTTGACTCCTGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp AGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAGGAATTAAGGCCCCAG +
Preference number: 3 (lower is better)
Translates to: RFGQGLYLAVLT*QERLCKELRPQ
Trigger: CTGGGGCCTTAATTCCTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGAGCCCTTGTCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CCAAAGATGTGGGTACACATCATTCCAAAAGAAGGGTaGCAGGGGGCAGAGGCTCAAGAAGTCTGTGCTGAA +
Preference number: 3 (lower is better)
Translates to: PKMWVHIIPKEG*QGAEAQEVCAE
Trigger: TTCAGCACAGACTTCTTGAGCCTCTGCCCCCTGTCACCCTTCTTTTGGAATGATGTGTACCCACATCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACATaGTCGTGCACCTTATGGAGGGGAAGGCCAGATTCT +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVCVFT*SCTLWRGRPDS
Trigger: AGAATCTGGCCTTCCCCTCCATAAGGTGCACGAGCATGTAAACACACACACACACACACACACACACACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 3 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGGCAGCATCCTCCATCTaGAGGACAGCTCTGAGCGCA +
Preference number: 3 (lower is better)
Translates to: LTFKVHNVINTSDDILLRAASSI*RTALSA
Trigger: TGCGCTCAGAGCTGTCCTCAAGATGGAGGATGCTGC...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGTTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp AGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATT +
Preference number: 3 (lower is better)
Translates to: RGCSEVLAVGCL*SGCGGKSSVLI
Trigger: AATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp GAGTCAAGTGGTTGTCTCACAAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAGGTGAGGGAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: ESSGCLTNTKPI*GPAKPQVREER
Trigger: CCTTTCCTCCCTCACCTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATTTGTGAGACAACCACTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp GCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTaGGGCTTTGCTGATTGTCCCTCAGTAGATATTAAT +
Preference number: 3 (lower is better)
Translates to: ATGQVPYLRRLL*GFADCPSVDIN
Trigger: ATTAATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GCATCATGCTCTTTGCTCCACAGAGTGGTTGAGGATTaGAAAGCACCGTACAATGTCAGTTATGGAAGGGCT +
Preference number: 3 (lower is better)
Translates to: ASCSLLHRVVED*KAPYNVSYGRA
Trigger: AGCCCTTCCATAACTGACATTGTACGGTGCTTTGCAATCCTCAACCACTCTGTGGAGCAAAGAGCATGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 3 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 3 (lower is better)
Translates to: AGAAVICRTVYWFAETQWGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 3 (lower is better)
Translates to: KSSVLIIVYITGTGLPRILQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 3 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGA +
Preference number: 3 (lower is better)
Translates to: ICRTVYWFAETQ*PSGEAHRLAFR
Trigger: TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp CCTTCAGGCCCACAGAAAAGCAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAAAAGCAAGCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: PSGPQKSKKVFT*VLLKQQKQALL
Trigger: AAGGAGAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTTGCTTTTCTGTGGGCCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp AAAGTAGGCATCATGCTCTTTGCTCCACAGAGTGGTTaGGGATTGCAAAGCACCGTACAATGTCAGTTATGG +
Preference number: 3 (lower is better)
Translates to: KVGIMLFAPQSG*GLQSTVQCQLW
Trigger: CCATAACTGACATTGTACGGTGCTTTGCAATCCTCAACCACTCTGTGGAGCAAAGAGCATGATGCCTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp GGTCTAAGATGTGGGAACAAGAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACCCATCTTGGAGATGAG +
Preference number: 3 (lower is better)
Translates to: GLRCGNKNFWAF*MVATFTHLGDE
Trigger: CTCATCTCCAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATTCTTGTTCCCACATCTTAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp GGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTC +
Preference number: 3 (lower is better)
Translates to: GKSLDETSEALL*IWSKTPQVSMF
Trigger: GAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CCA 72 bp AGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTTAATTATTGTCTACAT +
Preference number: 3 (lower is better)
Translates to: RSSGCRLFVIWV*GKVLCVNYCLH
Trigger: ATGTAGACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACAGCCAGAACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 3 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR-3UTR CAA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR GCA 72 bp GTCTTCCTGGCAAAGGTTTCCATTTGCAATGTAATCTaGATTTCTACAAATACTCAATGTCCAAGGCCACTA +
Preference number: 3 (lower is better)
Translates to: VFLAKVSICNVI*ISTNTQCPRPL
Trigger: TAGTGGCCTTGGACATTGAGTATTTGTAGAAATGCAGATTACATTGCAAATGGAAACCTTTGCCAGGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR TCA 72 bp CAAGTAACAGCCACTCATGAAAAGACACACAGATATTaGAACTACGCCAATCTTATTGCATGTTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: QVTATHEKTHRY*NYANLIACFSN
Trigger: GTTGGAGAAACATGCAATAAGATTGGCGTAGTTTCAATATCTGTGTGTCTTTTCATGAGTGGCTGTTACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RLLGRQRYNSRGSQAAPGIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...ACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp TCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGGGATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSGGSAIIVGGAKQPRVGIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...CCCAACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LQVGRLLGRQRYNSRGSQDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...TTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGATGCCTGCCTGGGCCTaGCCTGGCCGTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKMPAWA*PGRGAG
Trigger: TCCTGCCCCACGGCCAGGCCAGGCCCAGGCAGGCAT...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGAGAGGGGGCCGCTGTaGGCCAGGTGGGCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWERGPL*ARWALP
Trigger: CGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGGGAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: SSGGSAIIVGGAKQPRVGSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...CCCAACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp TGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: WGGSSGGSAIIVGGAKQPSGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...GGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGAGCCCCGGGACAGGCTaGTGCCGGGTCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLSPGTG*CRVCSP
Trigger: AGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGGGCT...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGCCAGGGGATGGGCCTaGCTCTTCCTGAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWARGWA*LFLSPG
Trigger: CCCGGGGCTCAGGAAGAGGCAGGCCCATCCCCTGGC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVADGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: GGSSGGSAIIVGGAKQPRTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...CCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGGGCTGTGGACACCCTaGTGGCCCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAGLWTP*WPWLGH
Trigger: GTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGATGCCTGCCTGGGCCTaGCCTGGCCGTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWMPAWA*PGRGAG
Trigger: TCCTGCCCCACGGCCAGGCCAGGCCCAGGCAGGCAT...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGGGGCTGCTGGGAGGTaGGGCACGCCGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCGAAGR*GTPWAR
Trigger: CCTAGCCCACGGCGTGCCCCACCTCCCAGCAGCCCC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGCTGGGGCTGAGAAGTaGGGCCCAGGCAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKAGAEK*GPGNAR
Trigger: CCTGGCGTTGCCTGGGCCCCACTTCTCAGCCCCAGC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGCTGGGGCTGAGAAGTaGGGCCCAGGCAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLAGAEK*GPGNAR
Trigger: CCTGGCGTTGCCTGGGCCCCACTTCTCAGCCCCAGC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAACTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LQVGRLLGRQRYNSRGSQLTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...TTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVASRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGGCGGGCCTGGCACACTaGTCCCGATGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRAGLAH*SRCQQG
Trigger: CCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGC...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGCGCCACACGAGGTaGAGCCGAGCTGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGWRHTR*SRADSG
Trigger: CCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCA...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGAGGCTGGTGCCTGCCTaGTCCTGGCCGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKRLVPA*SWPAAH
Trigger: ATGAGCTGCCGGCCAGGAGCAGGCAGGCACCAGCCT...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGGAAAGACAGGCTGGTaGCTGCCTGCTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAGKTGW*LPAPGR
Trigger: CCGGCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGAAAGACAGGCTGGTaGCTGCCTGCTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGKTGW*LPAPGR
Trigger: CCGGCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGCCAGGGGATGGGCCTaGCTCTTCCTGAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLARGWA*LFLSPG
Trigger: CCCGGGGCTCAGGAAGAGGCAGGCCCATCCCCTGGC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCTGTGGACACCCTGGTaGCCCTGGCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLLWTPW*PWLGHS
Trigger: GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAG...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTCTGTGGACACCCTGGTaGCCCTGGCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVALWTPW*PWLGHS
Trigger: GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAG...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCGTCATGAGGAGGGGGTaGCTGGAGCCACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSVMRRG*LEPLAA
Trigger: GGCAGCCAGTGGCTCCAGCCACCCCCTCCTCATGAC...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCTCTGCAGAGGCCCTTaGGACCTGGCGCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLLCRGP*DLAPHE
Trigger: CTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAG...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAACCTGCTTCCCTCCCTaGGCCCCGATCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLTCFPP*APISHR
Trigger: CCGGTGGCTGATCGGGGCCCAGGGAGGGAAGCAGGT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCTCCTCAGCCCAACCTTaGAGGCCCAGCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSSSAQP*RPSSWG
Trigger: GCCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGA...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp GTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTaGGGCACTCCTGCATACTGTCACAGCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSRGCGHPGGPG*GTPAYCHSQAW
Trigger: CCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCGGGCCTGGCACACTaGTCCCGATGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRAGLAH*SRCQQG
Trigger: CCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGCGGGCCTGGCACACTaGTCCCGATGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCAGLAH*SRCQQG
Trigger: CCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAISSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTGTGGGATCCACCCATaGCTGCCTGGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAICGIHP*LPGPGL
Trigger: CAGGCCAGGCCCAGGCAGGCATGGGTGGATCCCACA...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTGGCGCCACACGAGGTaGAGCCGAGCTGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGWRHTR*SRADSG
Trigger: CCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGTCACAGCCTGGCCTCTaGAGAGGCCCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLSQPGL*RGPWDL
Trigger: CAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCTGTGA...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTCACAGCCTGGCCTCTaGAGAGGCCCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLSQPGL*RGPWDL
Trigger: CAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCTGTGA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGCCCGGGACAGGCTGCTaGCGGGTCTGCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVPGTGC*RVCSPS
Trigger: AGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGG...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGCCCCGGGACAGGCTaGTGCCGGGTCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLSPGTG*CRVCSP
Trigger: AGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGGGCT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTCTCTGTTGTGCTGGGTaGTTGGGGCCAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLALCCAG*LGPGDG
Trigger: CCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAG...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAACGCCAGGCCCTCACTaGCCGCCACCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRTPGPH*PPPSVV
Trigger: CACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGT...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: AKQPRVGEPPGVVVRGILLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...CAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGCGATGTCAGCAGGGGTaGGGCTGGCCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLRCQQG*GWPDWP
Trigger: AGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCG...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCCGATGTCAGCAGGGGTaGGGCTGGCCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGRCQQG*GWPDWP
Trigger: AGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCG...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGTAGGACTGCGGGCCTaGCACACTGCTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGVGLRA*HTAPDV
Trigger: GACATCGGGAGCAGTGTGCCAGGCCCGCAGTCCTAC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATAGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGIDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATGGCACCTGGACCCCTaGAGTCAGGGCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGWHLDP*SQGWTH
Trigger: ATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTGGCACCTGGACCCCTaGAGTCAGGGCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLWHLDP*SQGWTH
Trigger: ATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGAGAGTGGCAGGCTCTaGGCGTGCCCGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVESGRL*ACPFLP
Trigger: GGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGCCACCCATGCCTGCCTaGGCCTGGCCTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEPPMPA*AWPGRG
Trigger: CCCACGGCCAGGCCAGGCCCAGGCAGGCATGGGTGG...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAACCTGCTTCCCTCCCTaGGCCCCGATCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGTCFPP*APISHR
Trigger: CCGGTGGCTGATCGGGGCCCAGGGAGGGAAGCAGGT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTCCTCAGCCCAACCTTaGAGGCCCAGCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGSSAQP*RPSSWG
Trigger: GCCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGACCACGAGGTGCTGTaGATTGGTGAGAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLDHEVL*IGESGR
Trigger: ACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACTGCCACGATGCTGGTaGGGCCCCGGACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGLPRCW*GPGLVF
Trigger: AAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPASGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGACCCGGGGAGGGTCGTaGTCGCCAAGTCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTETRGGS*SPSHGL
Trigger: CAGGCCGTGACTTGGCGAGCACGACCCTCCCCGGGT...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVCPEST*WGPGGW
Trigger: CCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTTGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVACPEST*WGPGGW
Trigger: CCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCA...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRARTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGRTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTACCTCCATGCCCAGCTaGCTGCTAAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVATSMPS*LLSSTR
Trigger: CCTCGTGGAGCTTAGCAGGCAGCTGGGCATGGAGGT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAATGCCCCAGGCCTTCTaGCACGATGCTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLMPQAF*HDAGEA
Trigger: GGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCAT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGACAAAGCCGCCAACCTaGAGGCCCCTAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRATKPPT*RPLGQA
Trigger: GGCCTGACCTAGGGGCCTGCAGGTTGGCGGCTTTGT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGGGCATCTCGGGCACTaGTGCACCGTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLGHLGH*CTVLSG
Trigger: ACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGGGCTCACAGGCTGGTaGCCAGTGGGTCAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGGLTGW*PVGQVW
Trigger: CCAAACTTGACCCACTGGGCACCAGCCTGTGAGCCC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCCGGGACAGGCTGCTaGCGGGTCTGCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYPGTGC*RVCSPS
Trigger: AGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGG...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAACGCCAGGCCCTCACTaGCCGCCACCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGTPGPH*PPPSVV
Trigger: CACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGSSGGSAIIVGGAKQPRSSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...CCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGGGGCTGGCCAGATTaGCCTTCATGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLWGWPD*PSCRPA
Trigger: GGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCA...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACACGGCCTGTCACAATaGGGTAGGACTGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLHGLSQ*GRTAGL
Trigger: CAGGCCCGCAGTCCTACCCCATTGTGACAGGCCGTG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGCCTGGCTCCTGGAGGTaGACTCTGGCCCCAACTACC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRPGSWR*TLAPTT
Trigger: GGTAGTTGGGGCCAGAGTCCACCTCCAGGAGCCAGG...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCTGGTGGCCCTGGCTTaGGCACTCCTGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLVALA*ALLHTV
Trigger: GACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGCTGGTGGCCCTGGCTTaGGCACTCCTGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLLVALA*ALLHTV
Trigger: GACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAG...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCTGTTTCCAGGGGCTGTaGACACCCTGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGCFQGL*TPWWPW
Trigger: CCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACA...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGGGCAGGCACACTTCTaGGCATCTCGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLGQAHF*ASRALL
Trigger: CAGCAGTGCCCGAGATGCCCAGAAGTGTGCCTGCCC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGTCATGAGGAGGGGGTaGCTGGAGCCACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCVMRRG*LEPLAA
Trigger: GGCAGCCAGTGGCTCCAGCCACCCCCTCCTCATGAC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGGGCCTGGCCTGGCCGTaGGGCAGGAGTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVGLAWP*GRSWFP
Trigger: TGGAAACCAACTCCTGCCCCACGGCCAGGCCAGGCC...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTCCAAGACTGCAGAACTaGCCTCGTAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAPRLQN*PRSGAT
Trigger: GGTGGCCCCACTACGAGGCCAGTTCTGCAGTCTTGG...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGGGAACCCTGAGGTTTaGGGCAACAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLGNPEV*GNRGKG
Trigger: CCCCTTGCCCCTGTTGCCCCAAACCTCAGGGTTCCC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCGGGAACCCTGAGGTTTaGGGCAACAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAGNPEV*GNRGKG
Trigger: CCCCTTGCCCCTGTTGCCCCAAACCTCAGGGTTCCC...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATTGTCAGCGTCGGTGCTaGGTAGCTGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYCQRRC*VAALSS
Trigger: GCTGGACAGGGCAGCTACTCAGCACCGACGCTGACA...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGTGTCAGCGTCGGTGCTaGGTAGCTGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKQPRVGEPPGVVVRGILCQRRC*VAALSS
Trigger: GCTGGACAGGGCAGCTACTCAGCACCGACGCTGACA...CAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR TCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCCCAGGTAAAGAGATaGTGGCACCTGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGPQVKR*WHLAPP
Trigger: TGGGGGTGCCAGGTGCCATCATCTCTTTACCTGGGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAACCTGCCTGGCCTGCTaGTCCCAAGTCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLTCLAC*SQVQSL
Trigger: GAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLCMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTCAGCAAAGCCTCAGGTaGGGGAGGAAAGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAQQSLR*GRKGMG
Trigger: CCCCATACCTTTCCTCCCTCACCTGAGGCTTTGCTG...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACGTCCCCAGCGCCTCTaGCCTTCCACCCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGRPQRL*PSTQLH
Trigger: ATGGAGTTGGGTGGAAGGTCAGAGGCGCTGGGGACG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAEVQPS*QWGSTH
Trigger: ATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLEVQPS*QWGSTH
Trigger: ATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGGCTGTGGTAATGGGTaGATTGGCAGGATCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLGCGNG*IGRIPA
Trigger: CGCAGGGATCCTGCCAATTCACCCATTACCACAGCC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCTCCATGTCCTGTCCTaGTGGTCCGAGGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLLHVLS*WSEESD
Trigger: ATCCGACTCCTCGGACCAGCAGGACAGGACATGGAG...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
CDS-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGCTCCATGTCCTGTCCTaGTGGTCCGAGGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLLHVLS*WSEESD
Trigger: ATCCGACTCCTCGGACCAGCAGGACAGGACATGGAG...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRLTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLARLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTCATCTCCCCAAAGTGTaGTCCTCTTGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAHLPKV*SSWRGA
Trigger: GGCCCCTCTCCAAGAGGAGCACACTTTGGGGAGATG...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCACCTCCATGCCCAGCTaGCTGCTAAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGTSMPS*LLSSTR
Trigger: CCTCGTGGAGCTTAGCAGGCAGCTGGGCATGGAGGT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGCCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGCCGAGGAAGGATGCTaGATGCCTCAGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLAEEGC*MPQAAG
Trigger: ACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGAGCCAGGTGGGCTTTaGCGAGGAAGGATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKEPGGL*RGRMLH
Trigger: ATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTATGCCCCAGGCCTTCTaGCACGATGCTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCMPQAF*HDAGEA
Trigger: GGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCAT...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGWLGHS*ILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACATCTCGGGCACTGCTaGACCGTACTGTCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLHLGHC*TVLSGA
Trigger: CGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGGGCATCTCGGGCACTaGTGCACCGTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIGHLGH*CTVLSG
Trigger: ACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAGGCTGGTGCCTaGCTGCTCCTGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQRQAGA*LLLAGS
Trigger: GCTGCCGGCCAGGAGCAGGCAGGCACCAGCCTGTCT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCGGGTGGGTGGGTTTGTaGCTCTGTCTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGGWVGL*LCLSCH
Trigger: GTGGCAGGAGAGACAGAGGCACAAACCCACCCACCC...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGAGTCGGGGAGGAGATaGACGACTGCCAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIESGRR*TTAKSP
Trigger: GGGTGACTTGGCAGTCGTGCATCTCCTCCCCGACTC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGAGTCGGGGAGGAGATaGACGACTGCCAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVESGRR*TTAKSP
Trigger: GGGTGACTTGGCAGTCGTGCATCTCCTCCCCGACTC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: WGGSSGGSAIIVGGAKQPSSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...GGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTGGGGCTGGCCAGATTaGCCTTCATGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVWGWPD*PSCRPA
Trigger: GGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCAAAGTGTGCTCCTCTTaGAGAGGGGCCTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSKVCSS*RGASGG
Trigger: TCCCCCTGAGGCCCCTCTCCAAGAGGAGCACACTTT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGCCTGGCTCCTGGAGGTaGACTCTGGCCCCAACTACC +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVPGSWR*TLAPTT
Trigger: GGTAGTTGGGGCCAGAGTCCACCTCCAGGAGCCAGG...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCAGCCAGCTCACCCTaGCTCCTGGAGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRAASSP*LLEVDS
Trigger: AGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCGCTTGTGCTTCCGCCTaGCAGCCCAGGAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGACASA*QPRSQV
Trigger: CACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGC...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGAGGAGCACAACTCGGTaGAGAGAGAATGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLRSTTR*RENGAW
Trigger: CCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCT...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGGQASL*VPVLSC
Trigger: GCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACC...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCG +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEGALPE*QGYTTP
Trigger: CGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACC...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACTGCACCGTACTGTCTaGTGCGCTGCCCGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGLHRTV*CAARVA
Trigger: TGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTGCACCGTACTGTCTaGTGCGCTGCCCGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYLHRTV*CAARVA
Trigger: TGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACAGGCTGGTGCCCAGTaGGTCAAGTTTGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLQAGAQ*VKFGPW
Trigger: CCATGGGCCAAACTTGACCCACTGGGCACCAGCCTG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGCAGGCTGGTGCCCAGTaGGTCAAGTTTGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRQAGAQ*VKFGPW
Trigger: CCATGGGCCAAACTTGACCCACTGGGCACCAGCCTG...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGTTGGGGCTCACAGGCTaGTGCCCAGTGGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKLGLTG*CPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAA...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCTGCCTGGGCCTGGCCTaGCCGTGGGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLCLGLA*PWGRSW
Trigger: CCAACTCCTGCCCCACGGCCAGGCCAGGCCCAGGCA...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCACCCATGCCTGCCTaGGCCTGGCCTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPPMPA*AWPGRG
Trigger: CCCACGGCCAGGCCAGGCCCAGGCAGGCATGGGTGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGGGTTCCCTTCAATCCTaGGGTGCCCAGGAACGGAGC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRGSLQS*GAQERS
Trigger: GCTCCGTTCCTGGGCACCCCAGGATTGAAGGGAACC...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGACAGCGAGGCCATGGCTaGATACTCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRQRGHG*ILCGLL
Trigger: GAGCAGACCACAGAGTATTCAGCCATGGCCTCGCTG...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGCACCCTAGCCCACAGTaGGTTCTCCAAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRHPSPQ*VLQAPS
Trigger: AGAGGGAGCTTGGAGAACTCACTGTGGGCTAGGGTG...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGCCCCAGGTAAAGAGATaGTGGCACCTGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVPQVKR*WHLAPP
Trigger: TGGGGGTGCCAGGTGCCATCATCTCTTTACCTGGGG...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCATGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPCMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTCAAGAAGTCTGTGCTaGAGACCCCTGACCCCACCA +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGSRSLC*RPLTPP
Trigger: TGGTGGGGTCAGGGGTCTTCAGCACAGACTTCTTGA...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGACTCTGATACCCTCTaGACCTCAGGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIDSDTL*TSGTAG
Trigger: CCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTCTTCCCTGCACATGTaGAAGGTGCCCAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLSSLHM*KVPKQH
Trigger: GTGCTGCTTGGGCACCTTTCACATGTGCAGGGAAGA...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGCCAAGTACCCTACCTaGGACGACTCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLAKYPT*DDSFEA
Trigger: AGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGC...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTGCTTTTGGAGAAGATaGGGGACGTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLCFWRR*GTWPQA
Trigger: TGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTGCTTTTGGAGAAGATaGGGGACGTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLACFWRR*GTWPQA
Trigger: TGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCCTCCATGTCCTGTCCTaGTGGTCCGAGGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGLHVLS*WSEESD
Trigger: ATCCGACTCCTCGGACCAGCAGGACAGGACATGGAG...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
CDS-3UTR GCA 90 bp TCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGGGAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGGSAIIVGGAKQPRVGSQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...CCCAACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTELTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGTACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCSGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCATCAGTGTTTGGTGCCCGCCTGGCTCCAAGGGTCAGTGACGGTCATAGGCGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: CHQCLVPAWLQGSVTVIGAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...GCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR GCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAESSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCATCTCCCCAAAGTGTaGTCCTCTTGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIHLPKV*SSWRGA
Trigger: GGCCCCTCTCCAAGAGGAGCACACTTTGGGGAGATG...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRCPEST*WGPGGW
Trigger: CCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGTCACCGGAACAGGCTTaGCCAGAATCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLSPEQA*PESTCW
Trigger: CCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGA...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTCTGCCCTGGCTCTCTaGCATCCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLASALAL*HPGDIQ
Trigger: CTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAACTACCTCCCTTCTTTaGCCCGCAGGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLTTSLL*PAGSGW
Trigger: CCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGACTACCTCCCTTCTTTaGCCCGCAGGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWTTSLL*PAGSGW
Trigger: CCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGT...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCCGTGTGCATCCATGTaGGCTTGTGCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLPCASM*ACASAW
Trigger: CCAGGCGGAAGCACAAGCGCACATGGATGCACACGG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACATCTCGGGCACTGCTaGACCGTACTGTCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGHLGHC*TVLSGA
Trigger: CGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGGGCATCTCGGGCACTaGTGCACCGTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRGHLGH*CTVLSG
Trigger: ACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGATTTCACCCCTCAGTaGCCTGTGGCCACATCTGAG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLADFTPQ*PVATSE
Trigger: CTCAGATGTGGCCACAGGGCACTGAGGGGTGAAATC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGATTTCACCCCTCAGTaGCCTGTGGCCACATCTGAG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLDFTPQ*PVATSE
Trigger: CTCAGATGTGGCCACAGGGCACTGAGGGGTGAAATC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGGATCCACCCATGCCTaGCTGGGCCTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPGSTHA*LGLAWP
Trigger: CGGCCAGGCCAGGCCCAGGCAGGCATGGGTGGATCC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTGTGGGATCCACCCATaGCTGCCTGGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAECGIHP*LPGPGL
Trigger: CAGGCCAGGCCCAGGCAGGCATGGGTGGATCCCACA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGCTGGTGCCTGCCTaGTCCTGGCCGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQRLVPA*SWPAAH
Trigger: ATGAGCTGCCGGCCAGGAGCAGGCAGGCACCAGCCT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTAGACAGGCTGGTGCCTaGCTGCTCCTGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPRQAGA*LLLAGS
Trigger: GCTGCCGGCCAGGAGCAGGCAGGCACCAGCCTGTCT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGGGTGGGTGGGTTTGTaGCTCTGTCTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLGWVGL*LCLSCH
Trigger: GTGGCAGGAGAGACAGAGGCACAAACCCACCCACCC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCCCCTGCTGTTTCACCTaGTTCCCTCCCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSPCCFT*FPPWAP
Trigger: CGGGGCCCAGGGAGGGAAGCAGGTGAAACAGCAGGG...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCACGCCAGGCCCTCACTaGCCGCCACCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESTPGPH*PPPSVV
Trigger: CACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAACTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: LQVGRLLGRQRYNSRGSQLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...TTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTELSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVALPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGATGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLLGRQRYNSRGSQAAPGCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...ACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGCCTCAGGCCCCTCCTTaGCTGGGATCAGATGATCTC +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAPQAPP*LGSDDL
Trigger: GAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGG...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTTGGGTGAAGTGTCCATaGCAGGTGTCCGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAWVKCP*QVSEVT
Trigger: GGTCACTTCGGACACCTGCCATGGACACTTCACCCA...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGPESTC*GPGGWV
Trigger: CACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAAGTCTCTCTCTGCCCTaGCTCTCTGCCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLSLSLP*LSAILV
Trigger: CACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGACT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACCCCATCTGCTTGCTTaGAAGTGGAGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPPHLLA*KWRACP
Trigger: GGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVATLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLATLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGCTTGTGCTTCCGCCTaGCAGCCCAGGAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCACASA*QPRSQV
Trigger: CACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACATGACCTTGGCACCTaGACCCCTGGAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGHDLGT*TPGVRA
Trigger: AGCCCTGACTCCAGGGGTCCAGGTGCCAAGGTCATG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGCHSQA*SLFQSA
Trigger: CGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACA...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCTGTGGACACCCTGGTaGCCCTGGCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCLWTPW*PWLGHS
Trigger: GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCGTCATGAGGAGGGGGTaGCTGGAGCCACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCVMRRG*LEPLAA
Trigger: GGCAGCCAGTGGCTCCAGCCACCCCCTCCTCATGAC...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTGCCTGGGCCTGGCCTaGCCGTGGGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQCLGLA*PWGRSW
Trigger: CCAACTCCTGCCCCACGGCCAGGCCAGGCCCAGGCA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLRAASR*VTRPRL
Trigger: CAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCT...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLRAASR*VTRPRL
Trigger: CAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGGGGCTGCTGGGAGGTaGGGCACGCCGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSGAAGR*GTPWAR
Trigger: CCTAGCCCACGGCGTGCCCCACCTCCCAGCAGCCCC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCAAAGGAAAGACAGGCTaGTGCCTGCCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGKGKTG*CLPAPG
Trigger: GCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCCTTT...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGACCTGCTTCCCTCCCTaGGCCCCGATCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWTCFPP*APISHR
Trigger: CCGGTGGCTGATCGGGGCCCAGGGAGGGAAGCAGGT...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGTTGTGCTGGGTGCTTaGGGCCAGGGGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPVVLGA*GQGMGL
Trigger: CAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAAC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGTCCTCAGCCCAACCTTaGAGGCCCAGCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQSSAQP*RPSSWG
Trigger: GCCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGA...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTCCTCAGCCCAACCTTaGAGGCCCAGCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESSSAQP*RPSSWG
Trigger: GCCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp GAGAAGATGAGGGACGTGGCCACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGCGGCCATAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: EKMRDVATGMVI*GTRATSGHSHR
Trigger: CCTGTGGCTATGGCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCATCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp TGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAAGGGTCAGTGACGGTC +
Preference number: 4 (lower is better)
Translates to: WVAVTLNRCHQC*VPAWLQGSVTV
Trigger: GACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACTGCCCAGGATGCCGCTaGTGGAGTACGACGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDCPGCR*WSTTSR
Trigger: CCGGCTCGTCGTACTCCATCAGCGGCATCCTGGGCA...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCAGCGAGGCCATGGCTaGATACTCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCQRGHG*ILCGLL
Trigger: GAGCAGACCACAGAGTATTCAGCCATGGCCTCGCTG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCCTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTCACCGTTCCAGGGGCTaGGGGAGTAGGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLHRSRG*GSRESL
Trigger: GAGGCTCTCCCTACTCCCTCAGCCCCTGGAACGGTG...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAAVGCL*SGCGGK
Trigger: CTTTCCCCCACACCCAGATCACAAACAGCCTACAGC...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGTGCAGGGTTTTGTCTaGGGTCCCACAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLVQGFV*GPTAKT
Trigger: TGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCAC...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAAVLTD*LSRAWG
Trigger: GCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAECMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGTTCTCCTACCTTACCTaGCAGGTGGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRFSYLT*QVEAAA
Trigger: GGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAA...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGAGAGGGGGCCGCTGTaGGCCAGGTGGGCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAERGPL*ARWALP
Trigger: CGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCAGCAAAGCCTCAGGTaGGGGAGGAAAGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLQQSLR*GRKGMG
Trigger: CCCCATACCTTTCCTCCCTCACCTGAGGCTTTGCTG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYGAVNW*ERACVC
Trigger: ACACACACACGCCCGCTCTCACCAATTCACAGCACC...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACTGCCACGATGCTGGTaGGGCCCCGGACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPLPRCW*GPGLVF
Trigger: AAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGACTGTGGTTCCCCCATaGATATGCAAGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLTVVPP*ICKREP
Trigger: GGGTTCCCTCTTGCATATTCATGGGGGAACCACAGT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYEVQPS*QWGSTH
Trigger: ATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTC...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGGGGACCCCTTGGATTaGAACTCTAGAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVGDPLD*NSRMAV
Trigger: CACTGCCATTCTAGAGTTTCAATCCAAGGGGTCCCC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGTACCCATCTTGGAGATaGGCTAAAGGGGACCCCTTG +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLYPSWR*AKGDPL
Trigger: CAAGGGGTCCCCTTTAGCTCATCTCCAAGATGGGTA...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAACTCCTCCATGTCCGTaGGAGGAGCGCTCATCTCAC +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGTPPCP*EERSSH
Trigger: GTGAGATGAGCGCTCCTCTCACGGACATGGAGGAGT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTCCATGTCCTGTCCTaGTGGTCCGAGGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGILHVLS*WSEESD
Trigger: ATCCGACTCCTCGGACCAGCAGGACAGGACATGGAG...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVASQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVASRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQSGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGCGGGCCTGGCACACTaGTCCCGATGTCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLAGLAH*SRCQQG
Trigger: CCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: QPRVGEPPGVVVRGILRVRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...CACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGAGGAAGGATGCTGCATaGCTCAGGCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVRKDAA*LRQLVQ
Trigger: CTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCT...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAAGGAAGGATGCTGCATaGCTCAGGCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLRKDAA*LRQLVQ
Trigger: CTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIFAEEG*CMPQAA
Trigger: AGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAA...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACGCTGGACCACGAGGTaGTGTGAATTGGTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGRWTTR*CELVRA
Trigger: CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGTCCCTGTTCTTTCTTaGCTGATTGTGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLVPVLS*LIVGLG
Trigger: CCCCAGACCCACAATCAGGCAAGAAAGAACAGGGAC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATTGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYWLGHS*ILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCA...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGATTTCACCCCTCAGTaGCCTGTGGCCACATCTGAG +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVDFTPQ*PVATSE
Trigger: CTCAGATGTGGCCACAGGGCACTGAGGGGTGAAATC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATGGATCCACCCATGCCTaGCTGGGCCTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDGSTHA*LGLAWP
Trigger: CGGCCAGGCCAGGCCCAGGCAGGCATGGGTGGATCC...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTTGGCGCCACACGAGGTaGAGCCGAGCTGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPWRHTR*SRADSG
Trigger: CCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCA...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGAGGCTGGTGCCTGCCTaGTCCTGGCCGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKRLVPA*SWPAAH
Trigger: ATGAGCTGCCGGCCAGGAGCAGGCAGGCACCAGCCT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGGGGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: SSGGSAIIVGGAKQPRVGGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...CCCAACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQREAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LQVGRLLGRQRYNSRGSQTLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...TTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCCAGCCAGCGAGGCCATaGCTGAATACTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAQPARP*LNTLWS
Trigger: AGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTG...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCAGCCAGCGAGGCCATaGCTGAATACTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIQPARP*LNTLWS
Trigger: AGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTG...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGCAGCCAGCGAGGCCATaGCTGAATACTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVQPARP*LNTLWS
Trigger: AGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTG...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCGATGTCAGCAGGGGTaGGGCTGGCCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCRCQQG*GWPDWP
Trigger: AGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGCCCCATCTGCTTGCTTaGAAGTGGAGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLPHLLA*KWRACP
Trigger: GGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGG...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGGGGAACACCATGGGTTaGGGGTCAGGAGCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQGNTMG*GSGARV
Trigger: GACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCC...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAGAGGGAGGAAAGGTATaGGGGGAGCTCATTACAGGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLEGGKV*GELITG
Trigger: CCCTGTAATGAGCTCCCCCCATACCTTTCCTCCCTC...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCGAGGGAGGAAAGGTATaGGGGGAGCTCATTACAGGG +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGEGGKV*GELITG
Trigger: CCCTGTAATGAGCTCCCCCCATACCTTTCCTCCCTC...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPPRQLR*TTRCCE
Trigger: TTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGG...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCACGGCTTGTGTCCTTTaGAGCCATCCTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGTACVL*SHPHQA
Trigger: AGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGT...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGGATTTCTAGGGAATaGGGGTGGGGGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAGISRE*GWGSVF
Trigger: AAAGACACTCCCCCACCCCCATTCCCTAGAAATCCC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYGQASL*VPVLSC
Trigger: GCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACC...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCCCTGGAGTCAGGGCTaGACCCATGTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDPWSQG*THVQAW
Trigger: CCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGG...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGCTGCACCGTACTGTCTaGTGCGCTGCCCGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAELHRTV*CAARVA
Trigger: TGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAAGGAGAGCTGGTGTGTaGCTGGGAACCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLRRAGV*LGTIRA
Trigger: TGCTCTGATGGTTCCCAGCCACACACCAGCTCTCCT...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGAGGCCCTTGGGACCTaGCGCCACACGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPEALGT*RHTRCS
Trigger: GCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAAAGGAAAGACAGGCTaGTGCCTGCCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLKGKTG*CLPAPG
Trigger: GCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCCTTT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGACCTGCTTCCCTCCCTaGGCCCCGATCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLTCFPP*APISHR
Trigger: CCGGTGGCTGATCGGGGCCCAGGGAGGGAAGCAGGT...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCCAGGTGAGGCTGGTGTaGCCTCCTCCTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAQVRLV*PPPARP
Trigger: AGGCCTGGCAGGAGGAGGCCACACCAGCCTCACCTG...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGCTTGGGGCCAGGGGATaGGCCTGCCTCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVLGARG*ACLFLS
Trigger: GCTCAGGAAGAGGCAGGCCCATCCCCTGGCCCCAAG...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGCTGGGGCTGAGAAGTaGGGCCCAGGCAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEAGAEK*GPGNAR
Trigger: CCTGGCGTTGCCTGGGCCCCACTTCTCAGCCCCAGC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp TTATTGGGCCTCAGGTGCCCACCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCCCAGATGATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGLRCPPPSAC*EVEGLPQMILS
Trigger: TGAGAGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTGCCCAGGATGCCGCTaGTGGAGTACGACGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPECPGCR*WSTTSR
Trigger: CCGGCTCGTCGTACTCCATCAGCGGCATCCTGGGCA...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTGTCAGCGTCGGTGCTaGGTAGCTGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVCQRRC*VAALSS
Trigger: GCTGGACAGGGCAGCTACTCAGCACCGACGCTGACA...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGRLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTCTGCCATCCTGGTaGCATACAGATATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLSLPSW*HTDMGD
Trigger: GTCCCCCATATCTGTATGTCACCAGGATGGCAGAGA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGTGCAGGGTTTTGTCTaGGGTCCCACAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVVQGFV*GPTAKT
Trigger: TGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCAC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGGTGGCCCTACAGATaGCCCTGCTGCACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPGWPYR*PCCTKA
Trigger: TGCCTTGGTGCAGCAGGGTCATCTGTAGGGCCACCC...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTTGCATGTGCCTGCTGTaGGCTCGCTGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPCMCLL*ARWAPS
Trigger: GGATGGAGCCCAGCGAGCTCACAGCAGGCACATGCA...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGGAGAGGGGGCCGCTGTaGGCCAGGTGGGCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKERGPL*ARWALP
Trigger: CGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTC...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGCCTCTATGTTGCCGTaGGAGCCCCAAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGASMLP*EPQMSI
Trigger: AATTGACATTTGGGGCTCTCACGGCAACATAGAGGC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLPCWTP*STSLTS
Trigger: AGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGACTGTGGTTCCCCCATaGATATGCAAGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVTVVPP*ICKREP
Trigger: GGGTTCCCTCTTGCATATTCATGGGGGAACCACAGT...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGTACCCATCTTGGAGATaGGCTAAAGGGGACCCCTTG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWYPSWR*AKGDPL
Trigger: CAAGGGGTCCCCTTTAGCTCATCTCCAAGATGGGTA...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCTGAGACGACTCCTTTaGGGCTTTGCTGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGLRRLL*GFADCP
Trigger: GGGACAATCAGCAAAGCCTCAAAGGAGTCGTCTCAG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTCAGCCACCGGAAGCTaGTGGGTGGGTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESSATGS*WVGGFV
Trigger: CACAAACCCACCCACCCATCAGCTTCCGGTGGCTGA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGGGAAGGCCAGATTCTaGGGCTCTGAACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAGKARF*GSELFA
Trigger: TGCAAAAAGTTCAGAGCCTCAGAATCTGGCCTTCCC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGGGAAGGCCAGATTCTaGGGCTCTGAACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLGKARF*GSELFA
Trigger: TGCAAAAAGTTCAGAGCCTCAGAATCTGGCCTTCCC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGGAAGGCCAGATTCTaGGGCTCTGAACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGKARF*GSELFA
Trigger: TGCAAAAAGTTCAGAGCCTCAGAATCTGGCCTTCCC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATAAGGCCACTAGAGGGTaGAAAACCAGGGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYKATRG*KTRAAS
Trigger: AGACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTT...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: GSQAAPGWGTSRSRCTRNGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...ATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGSQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPLTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAISSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATACCCGGGGAGGGTCGTaGTCGCCAAGTCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDTRGGS*SPSHGL
Trigger: CAGGCCGTGACTTGGCGAGCACGACCCTCCCCGGGT...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRSSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCCTCAGGGGGAGCCTaGAGCACAACCAGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHASGGA*STTSPV
Trigger: CACTGGGCTGGTTGTGCTGCAGGCTCCCCCTGAGGC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTCTGCCCTGGCTCTCTaGCATCCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLSALAL*HPGDIQ
Trigger: CTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGCAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLQGSKR*RVLSEV
Trigger: GACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTG...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGCTGACAGGTGGAAGCTaGAGCCAGCTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQLTGGS*SQLTLA
Trigger: AGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAG...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLRQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAAGGAAGGATGCTGCATaGCTCAGGCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGRKDAA*LRQLVQ
Trigger: CTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCACGCTGGACCACGAGGTaGTGTGAATTGGTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPRWTTR*CELVRA
Trigger: CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCG...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGATGCCCCAGGCCTTCTaGCACGATGCTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKMPQAF*HDAGEA
Trigger: GGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCAT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQRPMEK*PRPSAT
Trigger: CGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAGGCATCATGCTCTTTaGTCCACAGAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVARHHAL*STEWLR
Trigger: CCTCAACCACTCTGTGGAGCAAAGAGCATGATGCCT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGACAAAGCCGCCAACCTaGAGGCCCCTAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVTKPPT*RPLGQA
Trigger: GGCCTGACCTAGGGGCCTGCAGGTTGGCGGCTTTGT...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCACACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPHRTVW*AARVAR
Trigger: CCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTG...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGGGCATCTCGGGCACTaGTGCACCGTACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEGHLGH*CTVLSG
Trigger: ACCAGACAGTACGGTGCAGCAGTGCCCGAGATGCCC...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGTGCACATGTGAAAGGTaGCCAAGCAGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRCTCER*PSSTDL
Trigger: GAGGTCAGTGCTGCTTGGGCACCTTTCACATGTGCA...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTCTGAGTCTCTTCCCTaGACATGTGAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVSESLP*TCERCP
Trigger: TGGGCACCTTTCACATGTGCAGGGAAGAGACTCAGA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGGATCCACCCATGCCTaGCTGGGCCTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRGSTHA*LGLAWP
Trigger: CGGCCAGGCCAGGCCCAGGCAGGCATGGGTGGATCC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAAGGCTGGTGCCTGCCTaGTCCTGGCCGGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRRLVPA*SWPAAH
Trigger: ATGAGCTGCCGGCCAGGAGCAGGCAGGCACCAGCCT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATAGACAGGCTGGTGCCTaGCTGCTCCTGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDRQAGA*LLLAGS
Trigger: GCTGCCGGCCAGGAGCAGGCAGGCACCAGCCTGTCT...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGGAAAGACAGGCTGGTaGCTGCCTGCTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGGKTGW*LPAPGR
Trigger: CCGGCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCGGGTGGGTGGGTTTGTaGCTCTGTCTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSGWVGL*LCLSCH
Trigger: GTGGCAGGAGAGACAGAGGCACAAACCCACCCACCC...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCCCTGCTGTTTCACCTaGTTCCCTCCCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLPCCFT*FPPWAP
Trigger: CGGGGCCCAGGGAGGGAAGCAGGTGAAACAGCAGGG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATCCCTGCTGTTTCACCTaGTTCCCTCCCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHPCCFT*FPPWAP
Trigger: CGGGGCCCAGGGAGGGAAGCAGGTGAAACAGCAGGG...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGAGGAGATGCACGACTaGCAAGTCACCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEEEMHD*QVTPTL
Trigger: CAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCTC...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCGAGTCGGGGAGGAGATaGACGACTGCCAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESESGRR*TTAKSP
Trigger: GGGTGACTTGGCAGTCGTGCATCTCCTCCCCGACTC...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAGCCCCGGGACAGGCTaGTGCCGGGTCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQSPGTG*CRVCSP
Trigger: AGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGGGCT...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCACTCTGTTGTGCTGGGTaGTTGGGGCCAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPLCCAG*LGPGDG
Trigger: CCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAG...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCGCCACCCTCTGTTGTaGTGGGTGCTTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLRHPLL*WVLGAR
Trigger: CCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCG...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAACGCCAGGCCCTCACTaGCCGCCACCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRTPGPH*PPPSVV
Trigger: CACAACAGAGGGTGGCGGGCAGTGAGGGCCTGGCGT...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACATGTCCTGTCCTGCTaGTCCGAGGAGTCGGATAAT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLHVLSC*SEESDN
Trigger: ATTATCCGACTCCTCGGACCAGCAGGACAGGACATG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp AAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KQPRVGEPPGVVVRGILRTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...CCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLTLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVATLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGCAGCAGGGGTGGGGCTaGCCAGATTGGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQQQGWG*PDWPSC
Trigger: ACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTG...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGTAGGACTGCGGGCCTaGCACACTGCTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAVGLRA*HTAPDV
Trigger: GACATCGGGAGCAGTGTGCCAGGCCCGCAGTCCTAC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGATATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGATGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGATTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCAGTGTTTGGTGCCCGCCTGGCTCCAAGGGTCAGTGACGGTCATAGGCCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: CHQCLVPAWLQGSVTVIGLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAEMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTGGGTGAAGTGTCCATaGCAGGTGTCCGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRWVKCP*QVSEVT
Trigger: GGTCACTTCGGACACCTGCCATGGACACTTCACCCA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCCCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPPESTC*GPGGWV
Trigger: CACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLSHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGCAGCCAGCTCACCCTaGCTCCTGGAGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDAASSP*LLEVDS
Trigger: AGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGGCAGCCAGCTCACCCTaGCTCCTGGAGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKAASSP*LLEVDS
Trigger: AGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGC...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCAGCCAGCTCACCCTaGCTCCTGGAGGTGGACTCT +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSAASSP*LLEVDS
Trigger: AGAGTCCACCTCCAGGAGCCAGGGTGAGCTGGCTGC...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAACGGCTTGTGTCCTTTaGAGCCATCCTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRTACVL*SHPHQA
Trigger: AGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGT...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGACGGCTTGTGTCCTTTaGAGCCATCCTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRATACVL*SHPHQA
Trigger: AGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGGGAAGAAGGCCCATaGAGAAATGCCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLREEGP*RNAPGL
Trigger: AAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCCTGGAGTCAGGGCTaGACCCATGTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHPWSQG*THVQAW
Trigger: CCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGTGGCACCTGGACCCCTaGAGTCAGGGCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKWHLDP*SQGWTH
Trigger: ATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCA...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTGGCACCTGGACCCCTaGAGTCAGGGCTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSWHLDP*SQGWTH
Trigger: ATGGGTCCAGCCCTGACTCCAGGGGTCCAGGTGCCA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGTGTTTCCAGGGGCTGTaGACACCCTGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVCFQGL*TPWWPW
Trigger: CCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACA...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGAGAGTGGCAGGCTCTaGGCGTGCCCGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPESGRL*ACPFLP
Trigger: GGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCATGCCTGCCTGGGCCTaGCCTGGCCGTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGMPAWA*PGRGAG
Trigger: TCCTGCCCCACGGCCAGGCCAGGCCCAGGCAGGCAT...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAACCACCCATGCCTGCCTaGGCCTGGCCTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKPPMPA*AWPGRG
Trigger: CCCACGGCCAGGCCAGGCCCAGGCAGGCATGGGTGG...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGTAGTGGGGCCACCGTaGAGCCGGTCTAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAVVGPP*SRSSSE
Trigger: CTCTGAGCTAGACCGGCTCCACGGTGGCCCCACTAC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGAGGAGAGCTGGTGTGTaGCTGGGAACCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRRRAGV*LGTIRA
Trigger: TGCTCTGATGGTTCCCAGCCACACACCAGCTCTCCT...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGGAGAGCTGGTGTGTaGCTGGGAACCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLRRAGV*LGTIRA
Trigger: TGCTCTGATGGTTCCCAGCCACACACCAGCTCTCCT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGGGGCTGCTGGGAGGTaGGGCACGCCGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKGAAGR*GTPWAR
Trigger: CCTAGCCCACGGCGTGCCCCACCTCCCAGCAGCCCC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGGGGCTGCTGGGAGGTaGGGCACGCCGTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRGAAGR*GTPWAR
Trigger: CCTAGCCCACGGCGTGCCCCACCTCCCAGCAGCCCC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATGAGGCCCTTGGGACCTaGCGCCACACGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDEALGT*RHTRCS
Trigger: GCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTC...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCTCTGCAGAGGCCCTTaGGACCTGGCGCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPELCRGP*DLAPHE
Trigger: CTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGAAGCTGATGGGTGGGTaGGTTTGTGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAKLMGG*VCASVS
Trigger: AGAGACAGAGGCACAAACCCACCCACCCATCAGCTT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGAAGCTGATGGGTGGGTaGGTTTGTGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVKLMGG*VCASVS
Trigger: AGAGACAGAGGCACAAACCCACCCACCCATCAGCTT...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCAGGTGAGGCTGGTGTaGCCTCCTCCTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEQVRLV*PPPARP
Trigger: AGGCCTGGCAGGAGGAGGCCACACCAGCCTCACCTG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCTTGGGGCCAGGGGATaGGCCTGCCTCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLLGARG*ACLFLS
Trigger: GCTCAGGAAGAGGCAGGCCCATCCCCTGGCCCCAAG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGTTGTGCTGGGTGCTTaGGGCCAGGGGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPVVLGA*GQGMGL
Trigger: CAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAAC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATGCTGGGGCTGAGAAGTaGGGCCCAGGCAACGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDAGAEK*GPGNAR
Trigger: CCTGGCGTTGCCTGGGCCCCACTTCTCAGCCCCAGC...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGCCCAGGATGCCGCTaGTGGAGTACGACGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLACPGCR*WSTTSR
Trigger: CCGGCTCGTCGTACTCCATCAGCGGCATCCTGGGCA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTEGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGTGTCAGCGTCGGTGCTaGGTAGCTGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLCQRRC*VAALSS
Trigger: GCTGGACAGGGCAGCTACTCAGCACCGACGCTGACA...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPARLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTTACATGGGTGCTGCTaGAGCAACAAAAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVLHGCC*SNKSKL
Trigger: GAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCTTCGGAAAAGTAGCTaGGGAATCTCCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLRKSS*GISQTV
Trigger: AACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACACCGTTCCAGGGGCTaGGGGAGTAGGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQHRSRG*GSRESL
Trigger: GAGGCTCTCCCTACTCCCTCAGCCCCTGGAACGGTG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCACCCTAGCCCACAGTaGGTTCTCCAAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCHPSPQ*VLQAPS
Trigger: AGAGGGAGCTTGGAGAACTCACTGTGGGCTAGGGTG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTCTCTGCCATCCTGGTaGCATACAGATATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRSLPSW*HTDMGD
Trigger: GTCCCCCATATCTGTATGTCACCAGGATGGCAGAGA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGTGCAGGGTTTTGTCTaGGGTCCCACAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCVQGFV*GPTAKT
Trigger: TGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCAC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCAGGACTCCACCTTGCTaGGCCTTAGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSRTPPC*ALVFSS
Trigger: AGAAGAGAAAACTAAGGCTCAGCAAGGTGGAGTCCT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTCTGCCACGATGCTGGTaGGGCCCCGGACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPLPRCW*GPGLVF
Trigger: AAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAG...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGAGGACAGGAGGTGAATaGGAAAGGGGGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVRTGGE*ERGQLT
Trigger: TGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCT...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCAGGACAGGAGGTGAATaGGAAAGGGGGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIRTGGE*ERGQLT
Trigger: TGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGACAAAGGACAGGAGGTaGATGAGAAAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKTKDRR*MRKGAI
Trigger: AATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGT...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTGCAAGAGCCCAAGATaGGGCCTGGGAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWCKSPR*GLGEWQ
Trigger: CTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTGCAAGAGCCCAAGATaGGGCCTGGGAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLCKSPR*GLGEWQ
Trigger: CTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTGCAAGAGCCCAAGATaGGGCCTGGGAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSCKSPR*GLGEWQ
Trigger: CTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCGTCCCCAGCGCCTCTaGCCTTCCACCCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPRPQRL*PSTQLH
Trigger: ATGGAGTTGGGTGGAAGGTCAGAGGCGCTGGGGACG...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACGTCCCCAGCGCCTCTaGCCTTCCACCCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPRPQRL*PSTQLH
Trigger: ATGGAGTTGGGTGGAAGGTCAGAGGCGCTGGGGACG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGCTAGGAGTCGTGGCCTaGCTGTCCAACTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRALGVVA*LSNFPI
Trigger: TATTGGAAAGTTGGACAGTCAGGCCACGACTCCTAG...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGACTCTAGAATGGCAGTaGCATGATTCTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKTLEWQ*HDSEVP
Trigger: GGGAACCTCAGAATCATGTCACTGCCATTCTAGAGT...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGCTGAGACGACTCCTTTaGGGCTTTGCTGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVLRRLL*GFADCP
Trigger: GGGACAATCAGCAAAGCCTCAAAGGAGTCGTCTCAG...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGGGAAGGCCAGATTCTaGGGCTCTGAACTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWGKARF*GSELFA
Trigger: TGCAAAAAGTTCAGAGCCTCAGAATCTGGCCTTCCC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGTCACACACCCGCTCTaGCAGCAGCCGGTCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPVTHPL*QQPVPD
Trigger: ATCAGGGACCGGCTGCTGGCAGAGCGGGTGTGTGAC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYSQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRLTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPELTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGTACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KQPRVGEPPGVVVRGILRYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...CCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGATCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRSGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGSGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp CAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: QPRVGEPPGVVVRGILRVSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...CACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCACCCGGGGAGGGTCGTaGTCGCCAAGTCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGTRGGS*SPSHGL
Trigger: CAGGCCGTGACTTGGCGAGCACGACCCTCCCCGGGT...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTACCCGGGGAGGGTCGTaGTCGCCAAGTCACGGCCTG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLTRGGS*SPSHGL
Trigger: CAGGCCGTGACTTGGCGAGCACGACCCTCCCCGGGT...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AKQPRVGEPPGVVVRGILVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...CAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVPGQRG*SAIGLR
Trigger: TCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGG...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAGCTCTGAGCGCACCTaGCAGGGTCACCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASSERT*QGHPGQ
Trigger: CTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTACCTCCATGCCCAGCTaGCTGCTAAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPTSMPS*LLSSTR
Trigger: CCTCGTGGAGCTTAGCAGGCAGCTGGGCATGGAGGT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTACCTCCATGCCCAGCTaGCTGCTAAGCTCCACGAGG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSTSMPS*LLSSTR
Trigger: CCTCGTGGAGCTTAGCAGGCAGCTGGGCATGGAGGT...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGCTGACAGGTGGAAGCTaGAGCCAGCTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVLTGGS*SQLTLA
Trigger: AGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAG...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPARQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACATGCCCCAGGCCTTCTaGCACGATGCTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHMPQAF*HDAGEA
Trigger: GGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCAT...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWRPMEK*PRPSAT
Trigger: CGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCT...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGTCCCTGTTCTTTCTTaGCTGATTGTGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGVPVLS*LIVGLG
Trigger: CCCCAGACCCACAATCAGGCAAGAAAGAACAGGGAC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATACAAAGCCGCCAACCTaGAGGCCCCTAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHTKPPT*RPLGQA
Trigger: GGCCTGACCTAGGGGCCTGCAGGTTGGCGGCTTTGT...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGGAGCCTGTTCCAAAGTaGGAAGGCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLEPVPK*EGKERE
Trigger: TTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTC...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCTGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSWLGHS*ILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCA...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQHRTVW*AARVAR
Trigger: CCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACGGGCTCACAGGCTGGTaGCCAGTGGGTCAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDGLTGW*PVGQVW
Trigger: CCAAACTTGACCCACTGGGCACCAGCCTGTGAGCCC...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATGTGGGATCCACCCATaGCTGCCTGGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTECGIHP*LPGPGL
Trigger: CAGGCCAGGCCCAGGCAGGCATGGGTGGATCCCACA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTGTGGGATCCACCCATaGCTGCCTGGGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRACGIHP*LPGPGL
Trigger: CAGGCCAGGCCCAGGCAGGCATGGGTGGATCCCACA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATTTAAGAAATGTACTTaGCTCGGACCTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGFKKCT*LGPLRG
Trigger: GCCTCGGAGAGGTCCGAGGCAAGTACATTTCTTAAA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGAGGAGATGCACGACTaGCAAGTCACCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAEEMHD*QVTPTL
Trigger: CAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCTC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGAGTCGGGGAGGAGATaGACGACTGCCAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAESGRR*TTAKSP
Trigger: GGGTGACTTGGCAGTCGTGCATCTCCTCCCCGACTC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCCCGGGACAGGCTGCTaGCGGGTCTGCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLPGTGC*RVCSPS
Trigger: AGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAAGCCCCGGGACAGGCTaGTGCCGGGTCTGCTCACCT +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKSPGTG*CRVCSP
Trigger: AGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGGGCT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTCGCCACCCTCTGTTGTaGTGGGTGCTTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSRHPLL*WVLGAR
Trigger: CCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCG...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACGCCACCCTCTGTTGTaGTGGGTGCTTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTERHPLL*WVLGAR
Trigger: CCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACATGTCCTGTCCTGCTaGTCCGAGGAGTCGGATAAT +
Preference number: 4 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGIHVLSC*SEESDN
Trigger: ATTATCCGACTCCTCGGACCAGCAGGACAGGACATG...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTAGGGACTCCCGGGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TSRSRCTRNTEGGCRDSREAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...CCGGGAGTCCCTACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAITLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCTGGGGCTGGCCAGATTaGCCTTCATGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAWGWPD*PSCRPA
Trigger: GGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCA...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTGGGGCTGGCCAGATTaGCCTTCATGTCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSWGWPD*PSCRPA
Trigger: GGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGGTAGGACTGCGGGCCTaGCACACTGCTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQVGLRA*HTAPDV
Trigger: GACATCGGGAGCAGTGTGCCAGGCCCGCAGTCCTAC...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AKQPRVGEPPGVVVRGILFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...CAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGEMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVPESTC*GPGGWV
Trigger: CACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGAGGCTGTTTGTGATCTaGGTGTGGGGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVRLFVI*VWGKVL
Trigger: GAGGACTTTCCCCCACACCCAGATCACAAACAGCCT...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCAGTCTCTCTCTGCCCTaGCTCTCTGCCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSSLSLP*LSAILV
Trigger: CACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGACT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLSHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCTGGCTCCTGGAGGTaGACTCTGGCCCCAACTACC +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPGSWR*TLAPTT
Trigger: GGTAGTTGGGGCCAGAGTCCACCTCCAGGAGCCAGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLPRQLR*TTRCCE
Trigger: TTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAAGGGAAGAAGGCCCATaGAGAAATGCCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPREEGP*RNAPGL
Trigger: AAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCT...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGGAGCACAACTCGGTaGAGAGAGAATGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESRSTTR*RENGAW
Trigger: CCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGGGATTTCTAGGGAATaGGGGTGGGGGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLGISRE*GWGSVF
Trigger: AAAGACACTCCCCCACCCCCATTCCCTAGAAATCCC...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGCACTGTTGTGGATTTaGTCAAAGACTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLALLWI*SKTPQV
Trigger: AACCTGCGGAGTCTTTGACCAAATCCACAACAGTGC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCGCACTGTTGTGGATTTaGTCAAAGACTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGALLWI*SKTPQV
Trigger: AACCTGCGGAGTCTTTGACCAAATCCACAACAGTGC...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGCCTGGTCAGGGATTATaGCATGGCCTTGAATTGACT +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLPGQGL*HGLELT
Trigger: AGTCAATTCAAGGCCATGCCATAATCCCTGACCAGG...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGGGCTGTGGACACCCTaGTGGCCCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLGLWTP*WPWLGH
Trigger: GTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGGGCTGTGGACACCCTaGTGGCCCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGGLWTP*WPWLGH
Trigger: GTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATTGTTTCCAGGGGCTGTaGACACCCTGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHCFQGL*TPWWPW
Trigger: CCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACA...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKGALPE*QGYTTP
Trigger: CGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGGGGCAGGCACACTTCTaGGCATCTCGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQGQAHF*ASRALL
Trigger: CAGCAGTGCCCGAGATGCCCAGAAGTGTGCCTGCCC...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCCAGGCTGGTGCCCAGTaGGTCAAGTTTGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLQAGAQ*VKFGPW
Trigger: CCATGGGCCAAACTTGACCCACTGGGCACCAGCCTG...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTTGGGGCTCACAGGCTaGTGCCCAGTGGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESLGLTG*CPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGCAGTCGTTCTaGAGCGTGACTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRAGQSF*SVTSGK
Trigger: TTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAACTGGCTGCCAAGGCTaGGCAGTCGTTCTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPTGCQG*AVVLER
Trigger: ACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGT...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTTTGCTTCCCTGGCTTaGAGCTCAATTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAFASLA*SSILAE
Trigger: TTCAGCCAGAATTGAGCTCCAAGCCAGGGAAGCAAA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATCCGTGGGGCAGGAGTTaGTTTCCACCCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHPWGRS*FPPSRE
Trigger: TTCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGG...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCGTGGGGCAGGAGTTaGTTTCCACCCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPWGRS*FPPSRE
Trigger: TTCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCCGTGGGGCAGGAGTTaGTTTCCACCCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEPWGRS*FPPSRE
Trigger: TTCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGGCCTGGCCTGGCCGTaGGGCAGGAGTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAGLAWP*GRSWFP
Trigger: TGGAAACCAACTCCTGCCCCACGGCCAGGCCAGGCC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTGCCTGGGCCTGGCCTaGCCGTGGGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRCLGLA*PWGRSW
Trigger: CCAACTCCTGCCCCACGGCCAGGCCAGGCCCAGGCA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGATGCCTGCCTGGGCCTaGCCTGGCCGTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRMPAWA*PGRGAG
Trigger: TCCTGCCCCACGGCCAGGCCAGGCCCAGGCAGGCAT...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGTAGTGGGGCCACCGTaGAGCCGGTCTAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLVVGPP*SRSSSE
Trigger: CTCTGAGCTAGACCGGCTCCACGGTGGCCCCACTAC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGGGGAACCCTGAGGTTTaGGGCAACAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQGNPEV*GNRGKG
Trigger: CCCCTTGCCCCTGTTGCCCCAAACCTCAGGGTTCCC...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGAGGCCCTTGGGACCTaGCGCCACACGAGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGEALGT*RHTRCS
Trigger: GCTGCACCTCGTGTGGCGCCAGGTCCCAAGGGCCTC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACGTGCCTGCCTGCTCCTaGCCGGCAGCTCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDVPACS*PAAHFR
Trigger: TCTGAAATGAGCTGCCGGCCAGGAGCAGGCAGGCAC...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGGTGCCTGCCTGCTCCTaGCCGGCAGCTCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKVPACS*PAAHFR
Trigger: TCTGAAATGAGCTGCCGGCCAGGAGCAGGCAGGCAC...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGGTTCCCTTCAATCCTaGGGTGCCCAGGAACGGAGC +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDGSLQS*GAQERS
Trigger: GCTCCGTTCCTGGGCACCCCAGGATTGAAGGGAACC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTTGCTCGTGCACCTTATaGAGGGGAAGGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCCSCTL*RGRPDS
Trigger: AGAATCTGGCCTTCCCCTCCATAAGGTGCACGAGCA...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGAGGCAAGAATTGGCATaGGGAGACTCAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLRQELA*GDSVLF
Trigger: AAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATCTTGGGGCCAGGGGATaGGCCTGCCTCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDLGARG*ACLFLS
Trigger: GCTCAGGAAGAGGCAGGCCCATCCCCTGGCCCCAAG...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGTTGTGCTGGGTGCTTaGGGCCAGGGGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQVVLGA*GQGMGL
Trigger: CAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAAC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSL*VCRDPVAIGRS
Trigger: GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp GTCTACATCACCGGAACAGGCTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VYITGTGLPRIH*LGSWRVGEVSM
Trigger: CATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGATGTAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp GTGTGTGTGAGAACATCCGTGTGCATCCATGTGCGCTaGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VCVRTSVCIHVR*CFRLAAQESSG
Trigger: ACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTGCCCAGGATGCCGCTaGTGGAGTACGACGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLCPGCR*WSTTSR
Trigger: CCGGCTCGTCGTACTCCATCAGCGGCATCCTGGGCA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGATGCCCAGGATGCCGCTaGTGGAGTACGACGAGCCGG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRCPGCR*WSTTSR
Trigger: CCGGCTCGTCGTACTCCATCAGCGGCATCCTGGGCA...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR TCA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATAGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGIGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR TCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCAGCGAGGCCATGGCTaGATACTCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVQRGHG*ILCGLL
Trigger: GAGCAGACCACAGAGTATTCAGCCATGGCCTCGCTG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRRLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCACCGTTCCAGGGGCTaGGGGAGTAGGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKHRSRG*GSRESL
Trigger: GAGGCTCTCCCTACTCCCTCAGCCCCTGGAACGGTG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTTCTCCTACCTTACCTaGCAGGTGGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPFSYLT*QVEAAA
Trigger: GGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGAGAGGGGGCCGCTGTaGGCCAGGTGGGCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIERGPL*ARWALP
Trigger: CGGCAAAGCCCACCTGGCTCACAGCGGCCCCCTCTC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCCAGCAAAGCCTCAGGTaGGGGAGGAAAGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAQQSLR*GRKGMG
Trigger: CCCCATACCTTTCCTCCCTCACCTGAGGCTTTGCTG...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGACCACGAGGTGCTGTaGATTGGTGAGAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLDHEVL*IGESGR
Trigger: ACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGCCTCTATGTTGCCGTaGGAGCCCCAAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGASMLP*EPQMSI
Trigger: AATTGACATTTGGGGCTCTCACGGCAACATAGAGGC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGCCTCTATGTTGCCGTaGGAGCCCCAAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGASMLP*EPQMSI
Trigger: AATTGACATTTGGGGCTCTCACGGCAACATAGAGGC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGAGGACAGGAGGTGAATaGGAAAGGGGGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVRTGGE*ERGQLT
Trigger: TGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCT...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSPCWTP*STSLTS
Trigger: AGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGG...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACGTCCCCAGCGCCTCTaGCCTTCCACCCAACTCCAT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTERPQRL*PSTQLH
Trigger: ATGGAGTTGGGTGGAAGGTCAGAGGCGCTGGGGACG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACC +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLANFWAF*MVATFT
Trigger: GGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATT...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGCCAAGTACCCTACCTaGGACGACTCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLAKYPT*DDSFEA
Trigger: AGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGTCAGCCACCGGAAGCTaGTGGGTGGGTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLSATGS*WVGGFV
Trigger: CACAAACCCACCCACCCATCAGCTTCCGGTGGCTGA...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTGCTTTTGGAGAAGATaGGGGACGTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPCFWRR*GTWPQA
Trigger: TGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCAAGGCCACTAGAGGGTaGAAAACCAGGGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSKATRG*KTRAAS
Trigger: AGACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTESGGSL*PEASGR
Trigger: ACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTESSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR GCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVARLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACCTCGGATGACATTCTaGTTCGGAAAAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLPRMTF*FGKVAE
Trigger: CTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCATGCCCAGAATCCACTTaGTGGGGTCCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPCPEST*WGPGGW
Trigger: CCACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCA...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCTCACCGGAACAGGCTTaGCCAGAATCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCSPEQA*PESTCW
Trigger: CCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGA...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCATCTGCCCCGAGAGGATaGTCAGAAGTTCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPSAPRG*SEVLAV
Trigger: TACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGACCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTCTGCCCTGGCTCTCTaGCATCCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPSALAL*HPGDIQ
Trigger: CTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGQGSKR*RVLSEV
Trigger: GACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGACAGGTGGAAGCTaGAGCCAGCTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQLTGGS*SQLTLA
Trigger: AGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGAAGGATGCTGCATaGCTCAGGCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQRKDAA*LRQLVQ
Trigger: CTGAACCAGCTGCCTGAGGCATGCAGCATCCTTCCT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGCCGAGGAAGGATGCTaGATGCCTCAGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPAEEGC*MPQAAG
Trigger: ACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGAGCCAGGTGGGCTTTaGCGAGGAAGGATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDEPGGL*RGRMLH
Trigger: ATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAGTGAGAACATCCGTGTaGATCCATGTGCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPVRTSV*IHVRLC
Trigger: GCACAAGCGCACATGGATGCACACGGATGTTCTCAC...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGAGCCTGTTCCAAAGTaGGAAGGCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVEPVPK*EGKERE
Trigger: TTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWYCLVR*PSGKAT
Trigger: TGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVYCLVR*PSGKAT
Trigger: TGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTA...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSHRTVW*AARVAR
Trigger: CCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGGCTCACAGGCTGGTaGCCAGTGGGTCAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPGLTGW*PVGQVW
Trigger: CCAAACTTGACCCACTGGGCACCAGCCTGTGAGCCC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCGATTTCACCCCTCAGTaGCCTGTGGCCACATCTGAG +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCDFTPQ*PVATSE
Trigger: CTCAGATGTGGCCACAGGGCACTGAGGGGTGAAATC...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGGATCCACCCATGCCTaGCTGGGCCTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIGSTHA*LGLAWP
Trigger: CGGCCAGGCCAGGCCCAGGCAGGCATGGGTGGATCC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCACAGCCTGGCCTCTaGAGAGGCCCTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASQPGL*RGPWDL
Trigger: CAGGTCCCAAGGGCCTCTGCAGAGGCCAGGCTGTGA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTAGACAGGCTGGTGCCTaGCTGCTCCTGGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRRQAGA*LLLAGS
Trigger: GCTGCCGGCCAGGAGCAGGCAGGCACCAGCCTGTCT...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGAAAGACAGGCTGGTaGCTGCCTGCTCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEGKTGW*LPAPGR
Trigger: CCGGCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAAGTCACCCCCACCCTaGTGTTTCACCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCKSPPP*CFTCFP
Trigger: AGGGAAGCAGGTGAAACAGCAGGGTGGGGGTGACTT...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCGTGTGTGTGTTTACATaGTCGTGCACCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIVCVFT*SCTLWR
Trigger: CCTCCATAAGGTGCACGAGCATGTAAACACACACAC...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGGCTGCTGCCGGGTCTaGTCACCTTCTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGGCCRV*SPSLTQ
Trigger: TTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACCCGGGACAGGCTGCTaGCGGGTCTGCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEPGTGC*RVCSPS
Trigger: AGAAGGTGAGCAGACCCGGCAGCAGCCTGTCCCGGG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGCCAGGGGATGGGCCTaGCTCTTCCTGAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRARGWA*LFLSPG
Trigger: CCCGGGGCTCAGGAAGAGGCAGGCCCATCCCCTGGC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACTCTGTTGTGCTGGGTaGTTGGGGCCAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQLCCAG*LGPGDG
Trigger: CCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: QPRVGEPPGVVVRGILRVDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...CACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: GGSSGGSAIIVGGAKQPRNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...CCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTCTGCCCGGAAGCGAGTaGCCGTTCGGCACCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFLPGSE*PFGTGD
Trigger: GTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAG...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCAGCAGGGGTGGGGCTaGCCAGATTGGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHQQGWG*PDWPSC
Trigger: ACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACGATGTCAGCAGGGGTaGGGCTGGCCAGATTGGCCT +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQRCQQG*GWPDWP
Trigger: AGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCAAAGTGTGCTCCTCTTaGAGAGGGGCCTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLKVCSS*RGASGG
Trigger: TCCCCCTGAGGCCCCTCTCCAAGAGGAGCACACTTT...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCTCAGGCCCCTCCTTaGCTGGGATCAGATGATCTC +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWPQAPP*LGSDDL
Trigger: GAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGG...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATTGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTCCCCATCTGCTTGCTTaGAAGTGGAGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAPHLLA*KWRACP
Trigger: GGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGG...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGAGGGAGGAAAGGTATaGGGGGAGCTCATTACAGGG +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPEGGKV*GELITG
Trigger: CCCTGTAATGAGCTCCCCCCATACCTTTCCTCCCTC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSPRQLR*TTRCCE
Trigger: TTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCCCAGGCAGCTCCGCTaGACCACGAGGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLPRQLR*TTRCCE
Trigger: TTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGGGAAGAAGGCCCATaGAGAAATGCCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESREEGP*RNAPGL
Trigger: AAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTT +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVARENGA*RSENSL
Trigger: AAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGAGGAGCACAACTCGGTaGAGAGAGAATGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKRSTTR*RENGAW
Trigger: CCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPGQASL*VPVLSC
Trigger: GCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACC...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTTCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVSEALL*IWSKTP
Trigger: CGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGA...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGCCTGGTCAGGGATTATaGCATGGCCTTGAATTGACT +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAPGQGL*HGLELT
Trigger: AGTCAATTCAAGGCCATGCCATAATCCCTGACCAGG...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCCCTGGAGTCAGGGCTaGACCCATGTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKPWSQG*THVQAW
Trigger: CCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATCATGACCTTGGCACCTaGACCCCTGGAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHHDLGT*TPGVRA
Trigger: AGCCCTGACTCCAGGGGTCCAGGTGCCAAGGTCATG...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACTGTGGACACCCTGGTaGCCCTGGCTTGGGCACTCC +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKLWTPW*PWLGHS
Trigger: GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTGTTTCCAGGGGCTGTaGACACCCTGGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRACFQGL*TPWWPW
Trigger: CCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCG +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRGALPE*QGYTTP
Trigger: CGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTGGTGCGCTGCCCGAGTaGCAAGGCTACACCACCCCG +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFGALPE*QGYTTP
Trigger: CGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACC...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATGGGCAGGCACACTTCTaGGCATCTCGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDGQAHF*ASRALL
Trigger: CAGCAGTGCCCGAGATGCCCAGAAGTGTGCCTGCCC...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTCAAGTTTGGCCCATaGACATTTTTCTTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAVKFGP*TFFFRP
Trigger: CGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGAC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTACTGGCTGCCAAGGCTaGGCAGTCGTTCTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGTGCQG*AVVLER
Trigger: ACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGGCCTGGCCTGGCCGTaGGGCAGGAGTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGGLAWP*GRSWFP
Trigger: TGGAAACCAACTCCTGCCCCACGGCCAGGCCAGGCC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGGCCTGGCCTGGCCGTaGGGCAGGAGTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKGLAWP*GRSWFP
Trigger: TGGAAACCAACTCCTGCCCCACGGCCAGGCCAGGCC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATATGCCTGGGCCTGGCCTaGCCGTGGGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEICLGLA*PWGRSW
Trigger: CCAACTCCTGCCCCACGGCCAGGCCAGGCCCAGGCA...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGACCACCCATGCCTGCCTaGGCCTGGCCTGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRPPMPA*AWPGRG
Trigger: CCCACGGCCAGGCCAGGCCCAGGCAGGCATGGGTGG...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGTAGTGGGGCCACCGTaGAGCCGGTCTAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAVVGPP*SRSSSE
Trigger: CTCTGAGCTAGACCGGCTCCACGGTGGCCCCACTAC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACCAAGACTGCAGAACTaGCCTCGTAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPPRLQN*PRSGAT
Trigger: GGTGGCCCCACTACGAGGCCAGTTCTGCAGTCTTGG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCCAAGACTGCAGAACTaGCCTCGTAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEPRLQN*PRSGAT
Trigger: GGTGGCCCCACTACGAGGCCAGTTCTGCAGTCTTGG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGCTAAAGGGGACCCCTTaGATTGAAACTCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLLKGTP*IETLEW
Trigger: CCATTCTAGAGTTTCAATCCAAGGGGTCCCCTTTAG...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTCTAAAGGGGACCCCTTaGATTGAAACTCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVALKGTP*IETLEW
Trigger: CCATTCTAGAGTTTCAATCCAAGGGGTCCCCTTTAG...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCGGGCTTTCTGAATGGTaGCTACGTTTACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGGLSEW*LRLPIL
Trigger: CAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCC...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTCTGGGCTTTCTGAATaGTGGCTACGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVSGLSE*WLRLPI
Trigger: GATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACAGGTGAGGCTGGTGTaGCCTCCTCCTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRQVRLV*PPPARP
Trigger: AGGCCTGGCAGGAGGAGGCCACACCAGCCTCACCTG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp AATATTATTGGGCCTCAGGTGCCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCTGCCCCAGATGATCCT +
Preference number: 4 (lower is better)
Translates to: NIIGPQVPTPIC*LGSGGPAPDDP
Trigger: AGGATCATCTGGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTGTCAGCGTCGGTGCTaGGTAGCTGCCCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLCQRRC*VAALSS
Trigger: GCTGGACAGGGCAGCTACTCAGCACCGACGCTGACA...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTTACATGGGTGCTGCTaGAGCAACAAAAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVLHGCC*SNKSKL
Trigger: GAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAA...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAACACCGTTCCAGGGGCTaGGGGAGTAGGGAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKHRSRG*GSRESL
Trigger: GAGGCTCTCCCTACTCCCTCAGCCCCTGGAACGGTG...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGTCCTGGAGGGTGGGTaGAGTGTCCATGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSVLEGG*SVHGRC
Trigger: ACACCTGCCATGGACACTTCACCCACCCTCCAGGAC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPAVGCL*SGCGGK
Trigger: CTTTCCCCCACACCCAGATCACAAACAGCCTACAGC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWAVGCL*SGCGGK
Trigger: CTTTCCCCCACACCCAGATCACAAACAGCCTACAGC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCACCCTAGCCCACAGTaGGTTCTCCAAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHHPSPQ*VLQAPS
Trigger: AGAGGGAGCTTGGAGAACTCACTGTGGGCTAGGGTG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTACCTGCCTGGCCTGCTaGTCCCAAGTCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLATCLAC*SQVQSL
Trigger: GAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATTCTCCTACCTTACCTaGCAGGTGGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPFSYLT*QVEAAA
Trigger: GGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCTGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPCAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLCAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCATGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPCAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTCAAGAAGTCTGTGCTaGAGACCCCTGACCCCACCA +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSSRSLC*RPLTPP
Trigger: TGGTGGGGTCAGGGGTCTTCAGCACAGACTTCTTGA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACTCAAGAAGTCTGTGCTaGAGACCCCTGACCCCACCA +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDSRSLC*RPLTPP
Trigger: TGGTGGGGTCAGGGGTCTTCAGCACAGACTTCTTGA...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACCACGAGGTGCTGTaGATTGGTGAGAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSDHEVL*IGESGR
Trigger: ACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGACCACGAGGTGCTGTaGATTGGTGAGAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEADHEVL*IGESGR
Trigger: ACGCCCGCTCTCACCAATTCACAGCACCTCGTGGTC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGGGGAAAGAGTCTGGATaGAACCTCAGAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVGKESG*NLRSTV
Trigger: AACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCC...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGATTATGGCATGGCCTTaGATTGACTCTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAIMAWP*IDSDTL
Trigger: GAGGGTATCAGAGTCAATTCAAGGCCATGCCATAAT...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTCCTTGCTGGACACCCTaGAGCACATCTCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLPCWTP*STSLTS
Trigger: AGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGG...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATTCTTCCCTGCACATGTaGAAGGTGCCCAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDSSLHM*KVPKQH
Trigger: GTGCTGCTTGGGCACCTTTCACATGTGCAGGGAAGA...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCAGCCTCTCGATGGGTaGCAAGGCCAAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHQPLDG*QGQDCR
Trigger: TCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGAGGTGCAGCCGAGCTaGCAGTGGGGAAGTACACAT +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEEVQPS*QWGSTH
Trigger: ATGTGTACTTCCCCACTGTCAGCTCGGCTGCACCTC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACC +
Preference number: 4 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGNFWAF*MVATFT
Trigger: GGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATT...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCCTTTGAGGCTTTGCTaGTTGTCCCTCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWPLRLC*LSLSRY
Trigger: ATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGG...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCTTTGAGGCTTTGCTaGTTGTCCCTCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGPLRLC*LSLSRY
Trigger: ATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCCTGAGACGACTCCTTTaGGGCTTTGCTGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPLRRLL*GFADCP
Trigger: GGGACAATCAGCAAAGCCTCAAAGGAGTCGTCTCAG...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCTCTGCTCACCTTCTCTaGCCCAAGTCGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCSAHLL*PKSKTA
Trigger: TGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGA...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESSQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAESQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACAGGCAAGTGGGGGATaGTGGGGGACGGTCTCATGG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKQASGG*WGTVSW
Trigger: CCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCATCTCCCCAAAGTGTaGTCCTCTTGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHHLPKV*SSWRGA
Trigger: GGCCCCTCTCCAAGAGGAGCACACTTTGGGGAGATG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACCTCGGATGACATTCTaGTTCGGAAAAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGPRMTF*FGKVAE
Trigger: CTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTCACCGGAACAGGCTTaGCCAGAATCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSSPEQA*PESTCW
Trigger: CCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTCACCGGAACAGGCTTaGCCAGAATCCACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWSPEQA*PESTCW
Trigger: CCAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGRTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGTCTGCCCTGGCTCTCTaGCATCCTGGTGACATACAG +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKSALAL*HPGDIQ
Trigger: CTGTATGTCACCAGGATGGCAGAGAGCCAGGGCAGA...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCACTACCTCCCTTCTTTaGCCCGCAGGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLTTSLL*PAGSGW
Trigger: CCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGT...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATCCGTGTGCATCCATGTaGGCTTGTGCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDPCASM*ACASAW
Trigger: CCAGGCGGAAGCACAAGCGCACATGGATGCACACGG...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACCGTGTGCATCCATGTaGGCTTGTGCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEPCASM*ACASAW
Trigger: CCAGGCGGAAGCACAAGCGCACATGGATGCACACGG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGTGAGAACATCCGTGTaGATCCATGTGCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLVRTSV*IHVRLC
Trigger: GCACAAGCGCACATGGATGCACACGGATGTTCTCAC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCGCTGGACCACGAGGTaGTGTGAATTGGTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPRWTTR*CELVRA
Trigger: CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCG...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGTCCCTGTTCTTTCTTaGCTGATTGTGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPVPVLS*LIVGLG
Trigger: CCCCAGACCCACAATCAGGCAAGAAAGAACAGGGAC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGGCTTGGGCACTCCTaGATACTGTCACAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSWLGHS*ILSQPG
Trigger: GCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCA...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGTACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLYCLVR*PSGKAT
Trigger: TGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTA...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGATACTGTCTGGTGCGCTaGCCGAGTGGCAAGGCTACA +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRYCLVR*PSGKAT
Trigger: TGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTA...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACACCGTACTGTCTGGTaGGCTGCCCGAGTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRHRTVW*AARVAR
Trigger: CCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACATCTCGGGCACTGCTaGACCGTACTGTCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQHLGHC*TVLSGA
Trigger: CGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCATCTCGGGCACTGCTaGACCGTACTGTCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSHLGHC*TVLSGA
Trigger: CGCACCAGACAGTACGGTGCAGCAGTGCCCGAGATG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCTGCACATGTGAAAGGTaGCCAAGCAGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPCTCER*PSSTDL
Trigger: GAGGTCAGTGCTGCTTGGGCACCTTTCACATGTGCA...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTTTAAGAAATGTACTTaGCTCGGACCTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVFKKCT*LGPLRG
Trigger: GCCTCGGAGAGGTCCGAGGCAAGTACATTTCTTAAA...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTTTCAGAGAAGCTGTTaGCTCATCAGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEFQRSC*LIRGAG
Trigger: GCCTGCTCCCCTGATGAGGCAACAGCTTCTCTGAAA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGAAGTCACCCCCACCCTaGTGTTTCACCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKKSPPP*CFTCFP
Trigger: AGGGAAGCAGGTGAAACAGCAGGGTGGGGGTGACTT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGGCTGCTGCCGGGTCTaGTCACCTTCTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSGCCRV*SPSLTQ
Trigger: TTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGCTCTGTTGTGCTGGGTaGTTGGGGCCAGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLLCCAG*LGPGDG
Trigger: CCCATCCCCTGGCCCCAAGCACCCAGCACAACAGAG...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTACAAGTAAGCGTCTATaGAGGCATCACAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: LHRTVWCAARVARLHHPVTSKRL*RHHKLW
Trigger: CCAAAGTTTGTGATGCCTGCATAGACGCTTACTTGT...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACAAGTAAGCGTCTATaGAGGCATCACAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: GASGKWGMLGDGLMGSLATSKRL*RHHKLW
Trigger: CCAAAGTTTGTGATGCCTGCATAGACGCTTACTTGT...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCCAGGACTTGATGGAATaGACAGGGAAAAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAIQDLME*TGKSFH
Trigger: GTGGAAACTTTTCCCTGTCCATTCCATCAAGTCCTG...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CCA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGCAGGACTTGATGGAATaGACAGGGAAAAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRQDLME*TGKSFH
Trigger: GTGGAAACTTTTCCCTGTCCATTCCATCAAGTCCTG...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CCA 90 bp CCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: PGWGTSRSRCTRNTEGGCWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...ACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCATGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTEWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAATGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTTGTTTGGTGCCCGCCTaGCTCCAAGGGTCAGTGACG +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSCLVPA*LQGSVT
Trigger: CGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACA...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLEMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAAAGTGTGCTCCTCTTaGAGAGGGGCCTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPKVCSS*RGASGG
Trigger: TCCCCCTGAGGCCCCTCTCCAAGAGGAGCACACTTT...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGCCTCAGGCCCCTCCTTaGCTGGGATCAGATGATCTC +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLPQAPP*LGSDDL
Trigger: GAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGG...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTCCAGAATCCACTTGCTaGGGTCCTGGAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSPESTC*GPGGWV
Trigger: CACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGGGAAGGAAAGAGCTGTaGGGTGGCCCTACAGATGAC +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVGRKEL*GGPTDD
Trigger: GTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCC...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACCCCATCTGCTTGCTTaGAAGTGGAGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRPHLLA*KWRACP
Trigger: GGGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGGAACACCATGGGTTaGGGGTCAGGAGCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEGNTMG*GSGARV
Trigger: GACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGGGAACACCATGGGTTaGGGGTCAGGAGCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLGNTMG*GSGARV
Trigger: GACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGCTTGTGCTTCCGCCTaGCAGCCCAGGAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAACASA*QPRSQV
Trigger: CACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGAAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTT +
Preference number: 4 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRRENGA*RSENSL
Trigger: AAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCT...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCATGACCTTGGCACCTaGACCCCTGGAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLHDLGT*TPGVRA
Trigger: AGCCCTGACTCCAGGGGTCCAGGTGCCAAGGTCATG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGACCTTGGCACCTaGACCCCTGGAGTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAHDLGT*TPGVRA
Trigger: AGCCCTGACTCCAGGGGTCCAGGTGCCAAGGTCATG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHCHSQA*SLFQSA
Trigger: CGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACA...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACTGGTGGCCCTGGCTTaGGCACTCCTGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTELVALA*ALLHTV
Trigger: GACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGGCAGGCACACTTCTaGGCATCTCGGGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEGQAHF*ASRALL
Trigger: CAGCAGTGCCCGAGATGCCCAGAAGTGTGCCTGCCC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGTCAAGTTTGGCCCATaGACATTTTTCTTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVVKFGP*TFFFRP
Trigger: CGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGAC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGCCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCACTGGCTGCCAAGGCTaGGCAGTCGTTCTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRATGCQG*AVVLER
Trigger: ACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTTTGCTTCCCTGGCTTaGAGCTCAATTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRFASLA*SSILAE
Trigger: TTCAGCCAGAATTGAGCTCCAAGCCAGGGAAGCAAA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCCTGTGTCAGGGTGCTTaGTTGGTTTTTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSLCQGA*LVFKIC
Trigger: GCAAATCTTAAAAACCAACCAAGCACCCTGACACAG...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACTGTGTCAGGGTGCTTaGTTGGTTTTTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGLCQGA*LVFKIC
Trigger: GCAAATCTTAAAAACCAACCAAGCACCCTGACACAG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGCCGTGGGGCAGGAGTTaGTTTCCACCCTCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLPWGRS*FPPSRE
Trigger: TTCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGG...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLRAASR*VTRPRL
Trigger: CAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCT...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 4 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGTGCCTGCCTGCTCCTaGCCGGCAGCTCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQVPACS*PAAHFR
Trigger: TCTGAAATGAGCTGCCGGCCAGGAGCAGGCAGGCAC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAAAGGAAAGACAGGCTaGTGCCTGCCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSKGKTG*CLPAPG
Trigger: GCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCCTTT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTGGTTCCCTTCAATCCTaGGGTGCCCAGGAACGGAGC +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLGSLQS*GAQERS
Trigger: GCTCCGTTCCTGGGCACCCCAGGATTGAAGGGAACC...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCTAAAGGGGACCCCTTaGATTGAAACTCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: MRDVATGMVILGTRATSGLKGTP*IETLEW
Trigger: CCATTCTAGAGTTTCAATCCAAGGGGTCCCCTTTAG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGGGCTTTCTGAATGGTaGCTACGTTTACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCGLSEW*LRLPIL
Trigger: CAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATAGGCAAGAATTGGCATaGGGAGACTCAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYRQELA*GDSVLF
Trigger: AAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCT...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGTTGTGCTGGGTGCTTaGGGCCAGGGGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCVVLGA*GQGMGL
Trigger: CAGGCCCATCCCCTGGCCCCAAGCACCCAGCACAAC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCACTCCCTGTCACAATaGGGTAGGACTGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAHSLSQ*GRTAGL
Trigger: CAGGCCCGCAGTCCTACCCCATTGTGACAGGGAGTG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377852.7
3UTR CAA 72 bp CTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGCCTCAGGTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: LIPAPPSVLVSH*VQILLGLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAACCCCAGGTAAAGAGATaGTGGCACCTGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEPQVKR*WHLAPP
Trigger: TGGGGGTGCCAGGTGCCATCATCTCTTTACCTGGGG...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCAGGTAAAGAGATaGTGGCACCTGGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGPQVKR*WHLAPP
Trigger: TGGGGGTGCCAGGTGCCATCATCTCTTTACCTGGGG...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGATCTACCTGGCTGTTCTaGCTTGACAAGAGAGACTAT +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGSTWLF*LDKRDY
Trigger: ATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGA...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDAVLTD*LSRAWG
Trigger: GCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGC...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTATTCCAAAAGAAGGGTaGCAGGGGGCAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPIPKEG*QGAEAQ
Trigger: TTGAGCCTCTGCCCCCTGTCACCCTTCTTTTGGAAT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAGAVNW*ERACVC
Trigger: ACACACACACGCCCGCTCTCACCAATTCACAGCACC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGTCGTTCTGGAGCGTaGCTTCTGGTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLSRSGA*LLVNGF
Trigger: AAATCCATTTACCAGAAGTCACGCTCCAGAACGACT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATCAGCCTCTCGATGGGTaGCAAGGCCAAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDQPLDG*QGQDCR
Trigger: TCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTG...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAACTGTGGTTCCCCCATaGATATGCAAGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPTVVPP*ICKREP
Trigger: GGGTTCCCTCTTGCATATTCATGGGGGAACCACAGT...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACC +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGNFWAF*MVATFT
Trigger: GGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATT...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTCAGCCACCGGAAGCTaGTGGGTGGGTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKSATGS*WVGGFV
Trigger: CACAAACCCACCCACCCATCAGCTTCCGGTGGCTGA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATTCTGCTCACCTTCTCTaGCCCAAGTCGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDSAHLL*PKSKTA
Trigger: TGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGA...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGAAGGCCACTAGAGGGTaGAAAACCAGGGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQKATRG*KTRAAS
Trigger: AGACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGAAGTAACAGCCACTCATaGAAAGACACACAGATATTG +
Preference number: 4 (lower is better)
Translates to: TLVALAWALLHTVTARPGSNSHS*KDTQIL
Trigger: CAATATCTGTGTGTCTTTTCATGAGTGGCTGTTACT...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAACTCACCGAGGACACCTaGGTCACGGAGCCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKLTEDT*VTEPVD
Trigger: GTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAG...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAAGCCGGCCGAATCCGTaGTCACCGAGGACACCTGCG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRSRPNP*SPRTPA
Trigger: CGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCT...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGTACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLPGQRG*SAIGLR
Trigger: TCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGG...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGCAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEQGSKR*RVLSEV
Trigger: GACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTG...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCACCCCCATCTGCTTaGTTGGAAGTGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKPPPSA*LEVEGL
Trigger: CAGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGG...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGCCGAGGAAGGATGCTaGATGCCTCAGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLAEEGC*MPQAAG
Trigger: ACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGCCGAGGAAGGATGCTaGATGCCTCAGGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGAEEGC*MPQAAG
Trigger: ACCAGCTGCCTGAGGCATGCAGCATCCTTCCTCGGC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQFAEEG*CMPQAA
Trigger: AGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATGTGAGAACATCCGTGTaGATCCATGTGCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDVRTSV*IHVRLC
Trigger: GCACAAGCGCACATGGATGCACACGGATGTTCTCAC...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGCTGGACCACGAGGTaGTGTGAATTGGTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEARWTTR*CELVRA
Trigger: CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKRPMEK*PRPSAT
Trigger: CGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGTCCCTGTTCTTTCTTaGCTGATTGTGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWVPVLS*LIVGLG
Trigger: CCCCAGACCCACAATCAGGCAAGAAAGAACAGGGAC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTTGGTTTTTAAGATTTaGTTCCCTGGCTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPALVFKI*FPGLEL
Trigger: GAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAA...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCATTTAAGAAATGTACTTaGCTCGGACCTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPFKKCT*LGPLRG
Trigger: GCCTCGGAGAGGTCCGAGGCAAGTACATTTCTTAAA...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTGCCTCTGTCTCTCCTaGCACAGGCCAAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPECLCLS*HRPSTL
Trigger: TAGGGTACTTGGCCTGTGGCAGGAGAGACAGAGGCA...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGAAGTCACCCCCACCCTaGTGTTTCACCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQKSPPP*CFTCFP
Trigger: AGGGAAGCAGGTGAAACAGCAGGGTGGGGGTGACTT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCACAAGTAAGCGTCTATaGAGGCATCACAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPATSKRL*RHHKLW
Trigger: CCAAAGTTTGTGATGCCTGCATAGACGCTTACTTGT...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKSSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDSSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAACTCTCTTGCGCTTGTTaGTGTCGGCGCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKLSCAC*CRRWGT
Trigger: CGTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAG...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCAGCAGGGGTGGGGCTaGCCAGATTGGCCTTCATGT +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGQQGWG*PDWPSC
Trigger: ACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTG...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGCACGGCCTGTCACAATaGGGTAGGACTGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRHGLSQ*GRTAGL
Trigger: CAGGCCCGCAGTCCTACCCCATTGTGACAGGCCGTG...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCGACGGTCATAGGCAGTaGCGGCTGCAGGTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIDGHRQ*RLQVGR
Trigger: CCGCCCCACCTGCAGCCGCCACTGCCTATGACCGTC...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGAGATGCATCATGGGTaGAGCAGTCTTCTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVEMHHG*SSLLSR
Trigger: CCGACTGAGAAGACTGCTCCACCCATGATGCATCTC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCATGGGTGAAGTGTCCATaGCAGGTGTCCGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPWVKCP*QVSEVT
Trigger: GGTCACTTCGGACACCTGCCATGGACACTTCACCCA...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTAGGCTGTTTGTGATCTaGGTGTGGGGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSRLFVI*VWGKVL
Trigger: GAGGACTTTCCCCCACACCCAGATCACAAACAGCCT...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGAGATGATGGCACCTaGCACCCCCATGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPRDDGT*HPHVKI
Trigger: GATTTTGACATGGGGGTGCCAGGTGCCATCATCTCT...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTCATTCAGCCCAGGTTTaGACAAGGGCTCTACCTGGC +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGHSAQV*TRALPG
Trigger: GCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATG...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGAAGGAAAGAGCTGTaGGGTGGCCCTACAGATGAC +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPGRKEL*GGPTDD
Trigger: GTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAGGAAGGAAAGAGCTGTaGGGTGGCCCTACAGATGAC +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSGRKEL*GGPTDD
Trigger: GTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCC...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACCTGGAGGTGGACTCTaGCCCCAACTACCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKPGGGL*PQLPPF
Trigger: GAAGGGAGGTAGTTGGGGCCAGAGTCCACCTCCAGG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGCTTGTGCTTCCGCCTaGCAGCCCAGGAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKACASA*QPRSQV
Trigger: CACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAGC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGACGGCTTGTGTCCTTTaGAGCCATCCTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVTACVL*SHPHQA
Trigger: AGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGT...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCGGGATTTCTAGGGAATaGGGGTGGGGGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLGISRE*GWGSVF
Trigger: AAAGACACTCCCCCACCCCCATTCCCTAGAAATCCC...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGGGATTTCTAGGGAATaGGGGTGGGGGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAGISRE*GWGSVF
Trigger: AAAGACACTCCCCCACCCCCATTCCCTAGAAATCCC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCACCCATGTCCAGGCCTaGTCAGGGATTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPTHVQA*SGIMAW
Trigger: CCATGCCATAATCCCTGACCAGGCCTGGACATGGGT...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTACCCATGTCCAGGCCTaGTCAGGGATTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGTHVQA*SGIMAW
Trigger: CCATGCCATAATCCCTGACCAGGCCTGGACATGGGT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRACHSQA*SLFQSA
Trigger: CGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTGGGCTGTGGACACCCTaGTGGCCCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCGLWTP*WPWLGH
Trigger: GTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCC...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGCAGGCTGGTGCCCAGTaGGTCAAGTTTGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLQAGAQ*VKFGPW
Trigger: CCATGGGCCAAACTTGACCCACTGGGCACCAGCCTG...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGAGAGTGGCAGGCTCTaGGCGTGCCCGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRESGRL*ACPFLP
Trigger: GGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAACTGGCTGCCAAGGCTaGGCAGTCGTTCTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGETGCQG*AVVLER
Trigger: ACGCTCCAGAACGACTGCCCAGCCTTGGCAGCCAGT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGTAGTGGGGCCACCGTaGAGCCGGTCTAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRVVGPP*SRSSSE
Trigger: CTCTGAGCTAGACCGGCTCCACGGTGGCCCCACTAC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAAGAGCAGCCTCTCGATaGGTGACAAGGCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPRAASR*VTRPRL
Trigger: CAGTCTTGGCCTTGTCACCCATCGAGAGGCTGCTCT...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGAGGTGGGGCACGCCGTaGGCTAGGAGTCGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILRWGTP*ARSRGL
Trigger: CAGGCCACGACTCCTAGCCCACGGCGTGCCCCACCT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGGGAACCCTGAGGTTTaGGGCAACAGGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRGNPEV*GNRGKG
Trigger: CCCCTTGCCCCTGTTGCCCCAAACCTCAGGGTTCCC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGATACACATCAGCACTGTaGTTCCCCCATGAATATGCA +
Preference number: 4 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGYTSAL*FPHEYA
Trigger: TGCATATTCATGGGGGAACCACAGTGCTGATGTGTA...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACTCTGCAGAGGCCCTTaGGACCTGGCGCCACACGAG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRLCRGP*DLAPHE
Trigger: CTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAG...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATACTCTGCAGAGGCCCTTaGGACCTGGCGCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEILCRGP*DLAPHE
Trigger: CTCGTGTGGCGCCAGGTCCCAAGGGCCTCTGCAGAG...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAAAGGAAAGACAGGCTaGTGCCTGCCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEKGKTG*CLPAPG
Trigger: GCCAGGAGCAGGCAGGCACCAGCCTGTCTTTCCTTT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGAAGCTGATGGGTGGGTaGGTTTGTGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVKLMGG*VCASVS
Trigger: AGAGACAGAGGCACAAACCCACCCACCCATCAGCTT...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAACAGCGAGGCCATGGCTaGATACTCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEQRGHG*ILCGLL
Trigger: GAGCAGACCACAGAGTATTCAGCCATGGCCTCGCTG...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGTTACATGGGTGCTGCTaGAGCAACAAAAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLLHGCC*SNKSKL
Trigger: GAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAA...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGCTGTAGGCTGTTTGTaGTCTGGGTGTGGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSAVGCL*SGCGGK
Trigger: CTTTCCCCCACACCCAGATCACAAACAGCCTACAGC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGCTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLLAVLT*QERLCK
Trigger: CTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAG...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGTCTCTGCCATCCTGGTaGCATACAGATATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLSLPSW*HTDMGD
Trigger: GTCCCCCATATCTGTATGTCACCAGGATGGCAGAGA...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGATTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAATTTTCCAGGCTCTTCTaGTTCCCGCCCCTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKFSRLF*FPPLRV
Trigger: CACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAA...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGTGGATAGACCAGGGTaGCAGGGAACACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAVDRPG*QGTPWV
Trigger: AACCCATGGTGTTCCCTGTCACCCTGGTCTATCCAC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATGTGCTGAAGACCCCTaGCCCCACCACTTCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLECAEDP*PHHFLL
Trigger: TAGCAGGAAGTGGTGGGGTCAGGGGTCTTCAGCACA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAACAGCAAAGCCTCAGGTaGGGGAGGAAAGGTATGGGG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEQQSLR*GRKGMG
Trigger: CCCCATACCTTTCCTCCCTCACCTGAGGCTTTGCTG...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGAGGACAGGAGGTGAATaGGAAAGGGGGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVRTGGE*ERGQLT
Trigger: TGTCAATTGCCCCCTTTCTCATTCACCTCCTGTCCT...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAACAGCCTCTCGATGGGTaGCAAGGCCAAGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEQPLDG*QGQDCR
Trigger: TCTGCAGTCTTGGCCTTGTCACCCATCGAGAGGCTG...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACACTGTGGTTCCCCCATaGATATGCAAGAGGGAACCC +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHTVVPP*ICKREP
Trigger: GGGTTCCCTCTTGCATATTCATGGGGGAACCACAGT...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGACTCTAGAATGGCAGTaGCATGATTCTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQTLEWQ*HDSEVP
Trigger: GGGAACCTCAGAATCATGTCACTGCCATTCTAGAGT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGGGGGACCCCTTGGATTaGAACTCTAGAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLGDPLD*NSRMAV
Trigger: CACTGCCATTCTAGAGTTTCAATCCAAGGGGTCCCC...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCATACCCATCTTGGAGATaGGCTAAAGGGGACCCCTTG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPYPSWR*AKGDPL
Trigger: CAAGGGGTCCCCTTTAGCTCATCTCCAAGATGGGTA...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGCCAAGTACCCTACCTaGGACGACTCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQAKYPT*DDSFEA
Trigger: AGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTCTGCTCACCTTCTCTaGCCCAAGTCGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQSAHLL*PKSKTA
Trigger: TGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACTCCATGTCCTGTCCTaGTGGTCCGAGGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRLHVLS*WSEESD
Trigger: ATCCGACTCCTCGGACCAGCAGGACAGGACATGGAG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAATACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGATAGGCAGTGGCGGCTaGAGGTGGGGCGGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRIGSGG*RWGGSS
Trigger: CGAGGAGCCGCCCCACCTGCAGCCGCCACTGCCTAT...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEPGQRG*SAIGLR
Trigger: TCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTCCCCCAGATCTTCCCTaGTGGCTTCCTCTGACCACC +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFPPDLP*WLPLTT
Trigger: GGTGGTCAGAGGAAGCCAGCAGGGAAGATCTGGGGG...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGCTGACAGGTGGAAGCTaGAGCCAGCTCACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRLTGGS*SQLTLA
Trigger: AGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAG...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGAGCCAGGTGGGCTTTaGCGAGGAAGGATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLEPGGL*RGRMLH
Trigger: ATGCAGCATCCTTCCTCGGCAAAGCCCACCTGGCTC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGACTTCGCCTCTATGTTaGCGTGAGAGCCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVTSPLC*RESPKC
Trigger: ACATTTGGGGCTCTCACGGCAACATAGAGGCGAAGT...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTACTTCGCCTCTATGTTaGCGTGAGAGCCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPTSPLC*RESPKC
Trigger: ACATTTGGGGCTCTCACGGCAACATAGAGGCGAAGT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGACTTCGCCTCTATGTTaGCGTGAGAGCCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWTSPLC*RESPKC
Trigger: ACATTTGGGGCTCTCACGGCAACATAGAGGCGAAGT...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTCTGAGTCTCTTCCCTaGACATGTGAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLSESLP*TCERCP
Trigger: TGGGCACCTTTCACATGTGCAGGGAAGAGACTCAGA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGGGTGGGTGGGTTTGTaGCTCTGTCTCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCGWVGL*LCLSCH
Trigger: GTGGCAGGAGAGACAGAGGCACAAACCCACCCACCC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAAGTCACCCCCACCCTaGTGTTTCACCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAKSPPP*CFTCFP
Trigger: AGGGAAGCAGGTGAAACAGCAGGGTGGGGGTGACTT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGGCTGCTGCCGGGTCTaGTCACCTTCTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCGCCRV*SPSLTQ
Trigger: TTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAGCCAGGGGATGGGCCTaGCTCTTCCTGAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQARGWA*LFLSPG
Trigger: CCCGGGGCTCAGGAAGAGGCAGGCCCATCCCCTGGC...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCCGCCACCCTCTGTTGTaGTGGGTGCTTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIRHPLL*WVLGAR
Trigger: CCTGGCCCCAAGCACCCAGCACAACAGAGGGTGGCG...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVADYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLSSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCACTGGAAGCTGGGACTaGTTGGTTGGGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGTGSWD*LVGWLL
Trigger: CAGCAGCCACCCAACCAACCAGTCCCAGCTTCCAGT...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGTGACTGGAAGCTaGGACTGGTTGGTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLAVTGS*DWLVGW
Trigger: CCACCCAACCAACCAGTCCCAGCTTCCAGTCACAGC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGCGTCACGGAGCCAGTaGACACTATGCTGTGACTGG +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRASRSQ*TLCCDW
Trigger: CCAGTCACAGCATAGTGTCCACTGGCTCCGTGACGC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGGTGCCATCAGTGTTTaGTGCCCGCCTGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCGAISV*CPPGSK
Trigger: CTTGGAGCCAGGCGGGCACCAAACACTGATGGCACC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAATGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEALSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCCTCAGGCCCCTCCTTaGCTGGGATCAGATGATCTC +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLPQAPP*LGSDDL
Trigger: GAGATCATCTGATCCCAGCCAAGGAGGGGCCTGAGG...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTGGTCCAAATATTATTaGGCCTCAGGTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGWSKYY*ASGAHP
Trigger: GGGGTGGGCACCTGAGGCCCAATAATATTTGGACCA...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTTCTTGTTTCCCACTTaGTCCAAATATTATTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAFLFPT*SKYYWA
Trigger: GGCCCAATAATATTTGGACCAAGTGGGAAACAAGAA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSSHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEATLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGGTCAGGCCAGCCTCTaGGTCCCTGTTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGGQASL*VPVLSC
Trigger: GCAAGAAAGAACAGGGACCCAGAGGCTGGCCTGACC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCCCTGGAGTCAGGGCTaGACCCATGTCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFPWSQG*THVQAW
Trigger: CCAGGCCTGGACATGGGTCCAGCCCTGACTCCAGGG...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCTGTCACAGCCAGGCCTaGAGCCTGTTCCAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGCHSQA*SLFQSA
Trigger: CGCACTTTGGAACAGGCTCCAGGCCTGGCTGTGACA...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGATTGGGGCTCACAGGCTaGTGCCCAGTGGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRLGLTG*CPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAA...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAATTGGGGCTCACAGGCTaGTGCCCAGTGGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKLGLTG*CPVGQV
Trigger: AACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAA...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTGTCATGAGGAGGGGGTaGCTGGAGCCACTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCVMRRG*LEPLAA
Trigger: GGCAGCCAGTGGCTCCAGCCACCCCCTCCTCATGAC...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAGGAGAGCTGGTGTGTaGCTGGGAACCATCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTERRAGV*LGTIRA
Trigger: TGCTCTGATGGTTCCCAGCCACACACCAGCTCTCCT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCAGGTGAGGCTGGTGTaGCCTCCTCCTGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFQVRLV*PPPARP
Trigger: AGGCCTGGCAGGAGGAGGCCACACCAGCCTCACCTG...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGCTATTGATTGGTTaGAATGTTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGWLLIG*NVQLSI
Trigger: AATGGAGAGTTGAACATTCCAACCAATCAATAGCCA...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCTCGTGCACCTTATaGAGGGGAAGGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSCSCTL*RGRPDS
Trigger: AGAATCTGGCCTTCCCCTCCATAAGGTGCACGAGCA...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTCTTGGGGCCAGGGGATaGGCCTGCCTCTTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCLGARG*ACLFLS
Trigger: GCTCAGGAAGAGGCAGGCCCATCCCCTGGCCCCAAG...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CTCTGCCATCCTGGTGACATACAGATATGGGGGACATaGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LCHPGDIQIWGT*SPKKAKPPLIT
Trigger: AGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CCGAGTGTTCTTGTTTCCCACTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCCCCATCTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PSVLVSHLVQIL*GLRCPPPSACL
Trigger: CAAGCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAATATTTGGACCAAGTGGGAAACAAGAACACTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CTTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACCAATCTGAGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LVLPPGSPGVKW*SHKYKTNLRTS
Trigger: GCTGGTCCTCAGATTGGTTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp ATTGGGGCTCACAGGCTGGTGCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCTTTAGGCCGACAGAAA +
Preference number: 4 (lower is better)
Translates to: IGAHRLVPSGSS*AHGHFSLGRQK
Trigger: TTTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACCAGCCTGTGAGCCCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGGCTCTGTGGTGGTaGAGATGTCTGAGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDWALWW*RCLSSA
Trigger: AGCACTACTCAGACATCTTCACCACCACAGAGCCCA...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPERLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQRLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTELEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACTGGAAAAGAGCTGCTaGTACTGCATCGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQLEKSC*YCIGPR
Trigger: TCTGGGACCGATGCAGTATCAGCAGCTCTTTTCCAG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGGCAGGTGTCCGAAGTaGCCTGAACCTGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILGRCPK*PEPGHA
Trigger: GGCATGCCCAGGTTCAGGTCACTTCGGACACCTGCC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCCACCCTAGCCCACAGTaGGTTCTCCAAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCHPSPQ*VLQAPS
Trigger: AGAGGGAGCTTGGAGAACTCACTGTGGGCTAGGGTG...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCACTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPLAVLT*QERLCK
Trigger: CTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAG...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAACCTGCCTGGCCTGCTaGTCCCAAGTCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRTCLAC*SQVQSL
Trigger: GAGAGACTGGACTTGGGATCAGCAGGCCAGGCAGGT...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSAVLTD*LSRAWG
Trigger: GCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGAGGTTGGAGCTAGACTaGTGGTATGAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLRLELD*WYEKFS
Trigger: TGAAAATTTCTCATACCATCAGTCTAGCTCCAACCT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTGGGGCCTGGAGATCTaGGAATTCACTTCGCCTCTA +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAWGLEI*EFTSPL
Trigger: TAGAGGCGAAGTGAATTCTCAGATCTCCAGGCCCCA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGACTCTGATACCCTCTaGACCTCAGGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKDSDTL*TSGTAG
Trigger: CCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATACAAAGGACAGGAGGTaGATGAGAAAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDTKDRR*MRKGAI
Trigger: AATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGT...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGACAAAGGACAGGAGGTaGATGAGAAAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: GGACSTTSPVRLLVKILKTKDRR*MRKGAI
Trigger: AATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGT...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACCTTGCTGGACACCCTaGAGCACATCTCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEPCWTP*STSLTS
Trigger: AGAGGTGAGAGATGTGCTTCAGGGTGTCCAGCAAGG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGTCGTTCTGGAGCGTaGCTTCTGGTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESSRSGA*LLVNGF
Trigger: AAATCCATTTACCAGAAGTCACGCTCCAGAACGACT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCCCTTTGAGGCTTTGCTaGTTGTCCCTCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSPLRLC*LSLSRY
Trigger: ATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGG...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGATCAGCCACCGGAAGCTaGTGGGTGGGTGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRSATGS*WVGGFV
Trigger: CACAAACCCACCCACCCATCAGCTTCCGGTGGCTGA...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCTGCTTTTGGAGAAGATaGGGGACGTGGCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGCFWRR*GTWPQA
Trigger: TGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCA...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCTGCTCACCTTCTCTaGCCCAAGTCGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASAHLL*PKSKTA
Trigger: TGCTGTCTTCGACTTGGGTCAGAGAAGGTGAGCAGA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRASQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGATACCTTCGTCTCTCTTaGGCTTGTTGGTGTCGGCGC +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRYLRLS*ACWCRR
Trigger: GCGCCGACACCAACAAGCGCAAGAGAGACGAAGGTA...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGESTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAGTGATGCACCAAGAGTaGGAGATGCATCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEVMHQE*EMHHGW
Trigger: CCACCCATGATGCATCTCGCACTCTTGGTGCATCAC...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCAGGACGGGGAGGGTCTaGCCCGAGAGGATGCTCAGA +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFRTGRV*PERMLR
Trigger: TCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGAGTGGTTGAGGATTaGAAAGCACCGTACAATGTC +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESRVVED*KAPYNV
Trigger: GACATTGTACGGTGCTTTGCAATCCTCAACCACTCT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAAGGCATCATGCTCTTTaGTCCACAGAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPRHHAL*STEWLR
Trigger: CCTCAACCACTCTGTGGAGCAAAGAGCATGATGCCT...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACAGGCATCATGCTCTTTaGTCCACAGAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHRHHAL*STEWLR
Trigger: CCTCAACCACTCTGTGGAGCAAAGAGCATGATGCCT...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCACAAAGCCGCCAACCTaGAGGCCCCTAGGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFTKPPT*RPLGQA
Trigger: GGCCTGACCTAGGGGCCTGCAGGTTGGCGGCTTTGT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGTGGCGCCACACGAGGTaGAGCCGAGCTGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRWRHTR*SRADSG
Trigger: CCCACTGTCAGCTCGGCTGCACCTCGTGTGGCGCCA...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCCCTGCTGTTTCACCTaGTTCCCTCCCTGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRPCCFT*FPPWAP
Trigger: CGGGGCCCAGGGAGGGAAGCAGGTGAAACAGCAGGG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGAGGAGATGCACGACTaGCAAGTCACCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPREEMHD*QVTPTL
Trigger: CAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCTC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGTGTTTACATGCTCGTaGACCTTATGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHVFTCS*TLWRGR
Trigger: CCTTCCCCTCCATAAGGTGCACGAGCATGTAAACAC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGGCTGCTGCCGGGTCTaGTCACCTTCTCTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIGCCRV*SPSLTQ
Trigger: TTGGGTCAGAGAAGGTGAGCAGACCCGGCAGCAGCC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEASSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGAAGCTGGGACTGGTTaGTTGGGTGGCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLEAGTG*LGGCCT
Trigger: AGTACAGCAGCCACCCAACCAACCAGTCCCAGCTTC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQTLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTGTAGGACTGCGGGCCTaGCACACTGCTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCVGLRA*HTAPDV
Trigger: GACATCGGGAGCAGTGTGCCAGGCCCGCAGTCCTAC...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCCACGGCCTGTCACAATaGGGTAGGACTGCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIHGLSQ*GRTAGL
Trigger: CAGGCCCGCAGTCCTACCCCATTGTGACAGGCCGTG...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358127.9
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAATGGGGGACGGTCTCATaGGCTCTCTGGCTATCTTCA +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEWGTVS*ALWLSS
Trigger: TGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCA...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGCAAGTGGGGGATGCTaGGGGACGGTCTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFASGGC*GTVSWA
Trigger: AGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTTTTGCAGAGACCCAGTaGCCATCGGGAGAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAFAETQ*PSGEAH
Trigger: ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAA...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEITGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTCCTTCCCAGGCTaGGGTGGTTATGATGGATGG +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKLSFPG*GGYDGW
Trigger: CCATCCATCATAACCACCCCAGCCTGGGAAGGAGAG...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATGGGTGAAGTGTCCATaGCAGGTGTCCGAAGTGACC +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEWVKCP*QVSEVT
Trigger: GGTCACTTCGGACACCTGCCATGGACACTTCACCCA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGGTGACATACAGATATaGGGGACATTGTCACCTAAG +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLGDIQI*GTLSPK
Trigger: CTTAGGTGACAATGTCCCCCATATCTGTATGTCACC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGGGAACACCATGGGTTaGGGGTCAGGAGCCCGAGTC +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFGNTMG*GSGARV
Trigger: GACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCAGGATCCAAAGATGTaGGTACACATCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SFRQVGDAGGRSHGLSGYQDPKM*VHIIPK
Trigger: TTTTGGAATGATGTGTACCCACATCTTTGGATCCTG...ATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGAGGGAAGAAGGCCCATaGAGAAATGCCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLREEGP*RNAPGL
Trigger: AAGGCCTGGGGCATTTCTCCATGGGCCTTCTTCCCT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTAGGAGCACAACTCGGTaGAGAGAGAATGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFRSTTR*RENGAW
Trigger: CCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCT...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGACCCATGTCCAGGCCTaGTCAGGGATTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKTHVQA*SGIMAW
Trigger: CCATGCCATAATCCCTGACCAGGCCTGGACATGGGT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAACCCATGTCCAGGCCTaGTCAGGGATTATGGCATGG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGETHVQA*SGIMAW
Trigger: CCATGCCATAATCCCTGACCAGGCCTGGACATGGGT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATACTGGTGGCCCTGGCTTaGGCACTCCTGCATACTGTC +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEILVALA*ALLHTV
Trigger: GACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAG...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCTGCACCGTACTGTCTaGTGCGCTGCCCGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFLHRTV*CAARVA
Trigger: TGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGAGAGTGGCAGGCTCTaGGCGTGCCCGTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILESGRL*ACPFLP
Trigger: GGGTAGAAACGGGCACGCCCAGAGCCTGCCACTCTC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGCTGGGCAGTCGTTCTaGAGCGTGACTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSAGQSF*SVTSGK
Trigger: TTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTTTGCTTCCCTGGCTTaGAGCTCAATTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVFASLA*SSILAE
Trigger: TTCAGCCAGAATTGAGCTCCAAGCCAGGGAAGCAAA...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATACCAAGACTGCAGAACTaGCCTCGTAGTGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIPRLQN*PRSGAT
Trigger: GGTGGCCCCACTACGAGGCCAGTTCTGCAGTCTTGG...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTAAGCTGATGGGTGGGTaGGTTTGTGCCTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSKLMGG*VCASVS
Trigger: AGAGACAGAGGCACAAACCCACCCACCCATCAGCTT...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATGGCTATTGATTGGTTaGAATGTTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: ELQASGGCWGTVSWALWLWLLIG*NVQLSI
Trigger: AATGGAGAGTTGAACATTCCAACCAATCAATAGCCA...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGAGGCAAGAATTGGCATaGGGAGACTCAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWRQELA*GDSVLF
Trigger: AAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCT...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAATGCATGTGTCTTCCTaGCAAAGGTTTCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPMHVSS*QRFPFA
Trigger: TGCAAATGGAAACCTTTGCCAGGAAGACACATGCAT...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCACATCTTTGGCAAATTaGCACTGCTGTAATTACATT +
Preference number: 4 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGTSLAN*HCCNYI
Trigger: AATGTAATTACAGCAGTGCCAATTTGCCAAAGATGT...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTTCGGAAAAGTAGCTaGGGAATCTCCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLLRKSS*GISQTV
Trigger: AACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAG...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTTCGGAAAAGTAGCTaGGGAATCTCCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQLRKSS*GISQTV
Trigger: AACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTCTCTGCCATCCTGGTaGCATACAGATATGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKSLPSW*HTDMGD
Trigger: GTCCCCCATATCTGTATGTCACCAGGATGGCAGAGA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGTGCAGGGTTTTGTCTaGGGTCCCACAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLVQGFV*GPTAKT
Trigger: TGTCTTTGCTGTGGGACCTCAGACAAAACCCTGCAC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCTTCTCCTACCTTACCTaGCAGGTGGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCFSYLT*QVEAAA
Trigger: GGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAA...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTTCAAGAAGTCTGTGCTaGAGACCCCTGACCCCACCA +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFSRSLC*RPLTPP
Trigger: TGGTGGGGTCAGGGGTCTTCAGCACAGACTTCTTGA...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGATTCCAAAAGAAGGGTaGCAGGGGGCAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLIPKEG*QGAEAQ
Trigger: TTGAGCCTCTGCCCCCTGTCACCCTTCTTTTGGAAT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGGGAAAGAGTCTGGATaGAACCTCAGAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGGKESG*NLRSTV
Trigger: AACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGACTCTGATACCCTCTaGACCTCAGGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIDSDTL*TSGTAG
Trigger: CCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGATTATGGCATGGCCTTaGATTGACTCTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVIMAWP*IDSDTL
Trigger: GAGGGTATCAGAGTCAATTCAAGGCCATGCCATAAT...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCTTCATTCAGGGGACTTaGGATTGTGATCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESFIQGT*DCDLCF
Trigger: GAAACACAGATCACAATCTCAAGTCCCCTGAATGAA...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTGCAAGAGCCCAAGATaGGGCCTGGGAGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFCKSPR*GLGEWQ
Trigger: CTGCCACTCTCCCAGGCCTCATCTTGGGCTCTTGCA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAATCTTCCCTGCACATGTaGAAGGTGCCCAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKSSLHM*KVPKQH
Trigger: GTGCTGCTTGGGCACCTTTCACATGTGCAGGGAAGA...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTAGTCGTTCTGGAGCGTaGCTTCTGGTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLSRSGA*LLVNGF
Trigger: AAATCCATTTACCAGAAGTCACGCTCCAGAACGACT...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCTAGGAGTCGTGGCCTaGCTGTCCAACTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLLGVVA*LSNFPI
Trigger: TATTGGAAAGTTGGACAGTCAGGCCACGACTCCTAG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATACCCATCTTGGAGATaGGCTAAAGGGGACCCCTTG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEYPSWR*AKGDPL
Trigger: CAAGGGGTCCCCTTTAGCTCATCTCCAAGATGGGTA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACTGAGACGACTCCTTTaGGGCTTTGCTGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGELRRLL*GFADCP
Trigger: GGGACAATCAGCAAAGCCTCAAAGGAGTCGTCTCAG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAAAGGCCACTAGAGGGTaGAAAACCAGGGCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKKATRG*KTRAAS
Trigger: AGACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTT...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGGTTGGTTGGGTGGCTaGTGTACTTTTGTCCGGATG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKGWLGG*CTFVRM
Trigger: CATCCGGACAAAAGTACAGCAGCCACCCAACCAACC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAAGCCAGTGGACACTATaGTGTGACTGGAAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLESQWTL*CDWKLG
Trigger: TCCCAGCTTCCAGTCACAGCATAGTGTCCACTGGCT...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCGCCATCAGTGTTTGGTaGCCGCCTGGCTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIAISVW*PPGSKG
Trigger: ACCCTTGGAGCCAGGCGGGCACCAAACACTGATGGC...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRADSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLADSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGACCAAGAGTGCGAGATaGATCATGGGTGGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLTKSAR*IMGGAV
Trigger: GACTGCTCCACCCATGATGCATCTCGCACTCTTGGT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTCTGCCCCGAGAGGATaGTCAGAAGTTCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLSAPRG*SEVLAV
Trigger: TACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAGGGGGTGCATGTGCCTaGTGTGAGCTCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQGGACA*CELAGL
Trigger: GAGCCCAGCGAGCTCACAGCAGGCACATGCACCCCC...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRFAEEG*CMPQAA
Trigger: AGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAA...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTTTTGCCGAGGAAGGATaGTGCATGCCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFFAEEG*CMPQAA
Trigger: AGCTGCCTGAGGCATGCAGCATCCTTCCTCGGCAAA...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCCGTGTGCATCCATGTaGGCTTGTGCTTCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFPCASM*ACASAW
Trigger: CCAGGCGGAAGCACAAGCGCACATGGATGCACACGG...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCAGGCCCATGGAGAAATaGCCCAGGCCTTCTGCCACG +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIRPMEK*PRPSAT
Trigger: CGTGGCAGAAGGCCTGGGGCATTTCTCCATGGGCCT...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGAGCCTGTTCCAAAGTaGGAAGGCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEEPVPK*EGKERE
Trigger: TTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGAGCCTGTTCCAAAGTaGGAAGGCAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLEPVPK*EGKERE
Trigger: TTCCCTTTCTTTGCCTTCGCACTTTGGAACAGGCTC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGGGCTCACAGGCTGGTaGCCAGTGGGTCAAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILGLTGW*PVGQVW
Trigger: CCAAACTTGACCCACTGGGCACCAGCCTGTGAGCCC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTGCACATGTGAAAGGTaGCCAAGCAGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLCTCER*PSSTDL
Trigger: GAGGTCAGTGCTGCTTGGGCACCTTTCACATGTGCA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGTTGGTTTTTAAGATTTaGTTCCCTGGCTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLLVFKI*FPGLEL
Trigger: GAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAA...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTTTCAGAGAAGCTGTTaGCTCATCAGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKFQRSC*LIRGAG
Trigger: GCCTGCTCCCCTGATGAGGCAACAGCTTCTCTGAAA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTTGCCTCTGTCTCTCCTaGCACAGGCCAAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRCLCLS*HRPSTL
Trigger: TAGGGTACTTGGCCTGTGGCAGGAGAGACAGAGGCA...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGCCACTCCAAGGGAAATaGGCCGTTTGTAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQPLQGK*AVCKSK
Trigger: TTTTGATTTACAAACGGCGCATTTCCCTTGGAGTGG...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGTGTTTACATGCTCGTaGACCTTATGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQVFTCS*TLWRGR
Trigger: CCTTCCCCTCCATAAGGTGCACGAGCATGTAAACAC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGTGTGTGTGTTTACATaGTCGTGCACCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRVCVFT*SCTLWR
Trigger: CCTCCATAAGGTGCACGAGCATGTAAACACACACAC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAAGTTCCACTATCCTCTaGCGGACTACATCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGESSTIL*RTTSGS
Trigger: ACTCCCGGATGTAGTCCGCCAGAGGATAGTGGAACT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCTGGGACTGGTTGGTTaGGTGGCTGCTGTACTTTTG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLLGLVG*VAAVLL
Trigger: CAAAAGTACAGCAGCCACCCAACCAACCAGTCCCAG...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTETLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGCAGCCAGCGAGGCCATaGCTGAATACTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRQPARP*LNTLWS
Trigger: AGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTG...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSCRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTTGCAGGACAGTCTATTaGTTTGCAGAGACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEACRTVY*FAETQW
Trigger: CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAACAGGCAGGCTGGGCTaGGGCTGCGGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRTGRLG*GCGYLQ
Trigger: CTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATTGGCATGGGGAGAGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LTFSDPSRRQQARIGMGRGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...TCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEVRDAS*VEQSSQ
Trigger: CTGAGAAGACTGCTCCACCCATGATGCATCTCGCAC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGAGGCTGTTTGTGATCTaGGTGTGGGGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKRLFVI*VWGKVL
Trigger: GAGGACTTTCCCCCACACCCAGATCACAAACAGCCT...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGAGGCTGTTTGTGATCTaGGTGTGGGGGAAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKRLFVI*VWGKVL
Trigger: GAGGACTTTCCCCCACACCCAGATCACAAACAGCCT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTAGAGATGATGGCACCTaGCACCCCCATGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEARDDGT*HPHVKI
Trigger: GATTTTGACATGGGGGTGCCAGGTGCCATCATCTCT...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCAGAGATGATGGCACCTaGCACCCCCATGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRARDDGT*HPHVKI
Trigger: GATTTTGACATGGGGGTGCCAGGTGCCATCATCTCT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGAGGGAGGAAAGGTATaGGGGGAGCTCATTACAGGG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKEGGKV*GELITG
Trigger: CCCTGTAATGAGCTCCCCCCATACCTTTCCTCCCTC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESSPGVK*LSHKYK
Trigger: TTTGTATTTGTGAGACAACCACTTGACTCCTGGGCT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 4 (lower is better)
Translates to: AGAAVICRTVYWFAETQWPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCCCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 4 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCACTGTTGTGGATTTaGTCAAAGACTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHALLWI*SKTPQV
Trigger: AACCTGCGGAGTCTTTGACCAAATCCACAACAGTGC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGCTGGGAAAGAGTCTaGATGAAACCTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHSWERV*MKPQKH
Trigger: GTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCT...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGCTGGGAAAGAGTCTaGATGAAACCTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSSWERV*MKPQKH
Trigger: GTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGAGCTGGGAAAGAGTCTaGATGAAACCTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQSWERV*MKPQKH
Trigger: GTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLVTSGK*ISPLSA
Trigger: GGCACTGAGGGGTGAAATCCATTTACCAGAAGTCAC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEVTSGK*ISPLSA
Trigger: GGCACTGAGGGGTGAAATCCATTTACCAGAAGTCAC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGCTGGGCAGTCGTTCTaGAGCGTGACTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRAGQSF*SVTSGK
Trigger: TTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTTGGAGCTCAATTCTaGCTGAATGTCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLLGAQF*LNVMRR
Trigger: CCTCCTCATGACATTCAGCCAGAATTGAGCTCCAAG...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCGTGCCTGCCTGCTCCTaGCCGGCAGCTCATTTCAGA +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIVPACS*PAAHFR
Trigger: TCTGAAATGAGCTGCCGGCCAGGAGCAGGCAGGCAC...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCTAAAGGGGACCCCTTaGATTGAAACTCTAGAATGG +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVLKGTP*IETLEW
Trigger: CCATTCTAGAGTTTCAATCCAAGGGGTCCCCTTTAG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGGGCTTTCTGAATGGTaGCTACGTTTACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHGLSEW*LRLPIL
Trigger: CAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCTCTGGGCTTTCTGAATaGTGGCTACGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPSGLSE*WLRLPI
Trigger: GATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGA...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTCTGGGCTTTCTGAATaGTGGCTACGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGSGLSE*WLRLPI
Trigger: GATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGA...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTGCTCGTGCACCTTATaGAGGGGAAGGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLCSCTL*RGRPDS
Trigger: AGAATCTGGCCTTCCCCTCCATAAGGTGCACGAGCA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGGCAAGAATTGGCATaGGGAGACTCAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSRQELA*GDSVLF
Trigger: AAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCATGCATGTGTCTTCCTaGCAAAGGTTTCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSMHVSS*QRFPFA
Trigger: TGCAAATGGAAACCTTTGCCAGGAAGACACATGCAT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGATGCATGTGTCTTCCTaGCAAAGGTTTCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEMHVSS*QRFPFA
Trigger: TGCAAATGGAAACCTTTGCCAGGAAGACACATGCAT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CCTTCTCTGACCCAAGTCGAAGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTGCTGTTTCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PSLTQVEDSRQE*AWGDSVLFLSF
Trigger: GAAACTCAGAAACAGCACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTCTTCGACTTGGGTCAGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAA +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLGGEDV*VVLPLK
Trigger: TTTGAGAGGCAGCACTACTCAGACATCTTCACCACC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGERLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAAGGCTGGGGTGGTTATaGTGGATGGATAGTCAGACA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLERLGWL*WMDSQT
Trigger: TGTCTGACTATCCATCCATCATAACCACCCCAGCCT...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTTACATGGGTGCTGCTaGAGCAACAAAAGCAAGCTC +
Preference number: 4 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDLHGCC*SNKSKL
Trigger: GAGCTTGCTTTTGTTGCTTCAGCAGCACCCATGTAA...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGAATCAATACCTCGGATaGCATTCTGCTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVNQYLG*HSASEK
Trigger: CTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATT...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTELAVLT*QERLCK
Trigger: CTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHNTKPI*GPAKPQ
Trigger: CTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATT...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILGAVNW*ERACVC
Trigger: ACACACACACGCCCGCTCTCACCAATTCACAGCACC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCGGTGCTGTGAATTGGTaGGAGCGGGCGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIGAVNW*ERACVC
Trigger: ACACACACACGCCCGCTCTCACCAATTCACAGCACC...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCTGCCACGATGCTGGTaGGGCCCCGGACTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRLPRCW*GPGLVF
Trigger: AAACACAAGTCCGGGGCCTCACCAGCATCGTGGCAG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGGTTGGAGCTAGACTaGTGGTATGAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPRLELD*WYEKFS
Trigger: TGAAAATTTCTCATACCATCAGTCTAGCTCCAACCT...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGACTCTGATACCCTCTaGACCTCAGGGACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILDSDTL*TSGTAG
Trigger: CCCAGCTGTCCCTGAGGTTCAGAGGGTATCAGAGTC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGATTATGGCATGGCCTTaGATTGACTCTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQIMAWP*IDSDTL
Trigger: GAGGGTATCAGAGTCAATTCAAGGCCATGCCATAAT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATTCATTCAGGGGACTTaGGATTGTGATCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPFIQGT*DCDLCF
Trigger: GAAACACAGATCACAATCTCAAGTCCCCTGAATGAA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTTTCATTCAGGGGACTTaGGATTGTGATCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLFIQGT*DCDLCF
Trigger: GAAACACAGATCACAATCTCAAGTCCCCTGAATGAA...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAACAAAGGACAGGAGGTaGATGAGAAAGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTETKDRR*MRKGAI
Trigger: AATTGCCCCCTTTCTCATTCACCTCCTGTCCTTTGT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGTCACCCTCAATAGGTaGCATCAGTGTTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCVTLNR*HQCLVP
Trigger: GGGCACCAAACACTGATGGCACCTATTGAGGGTGAC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGACAGTCTATTGGTTTaGAGAGACCCAGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKDSLLV*RDPVAI
Trigger: GATGGCCACTGGGTCTCTGCAAACCAATAGACTGTC...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGACATCTCCCCAAAGTGTaGTCCTCTTGGAGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRHLPKV*SSWRGA
Trigger: GGCCCCTCTCCAAGAGGAGCACACTTTGGGGAGATG...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTCGGATGACATTCTaGTTCGGAAAAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAPRMTF*FGKVAE
Trigger: CTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTTCTGCCCCGAGAGGATaGTCAGAAGTTCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFSAPRG*SEVLAV
Trigger: TACAGCCAGAACTTCTGAGCATCCTCTCGGGGCAGA...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTTATTGGGCCTCAGGTaGCCACCCCCATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFLLGLR*PPPSAC
Trigger: GCAAGCAGATGGGGGTGGGCACCTGAGGCCCAATAA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAACTACCTCCCTTCTTTaGCCCGCAGGTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRTTSLL*PAGSGW
Trigger: CCACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAAGGCAGGGAGAGAGATaGCAGGTAACATACCTTCTC +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGERQGER*QVTYLL
Trigger: GAGAAGGTATGTTACCTGGCATCTCTCTCCCTGCCT...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTGTGAGAACATCCGTGTaGATCCATGTGCGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFVRTSV*IHVRLC
Trigger: GCACAAGCGCACATGGATGCACACGGATGTTCTCAC...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTAGAGTGGTTGAGGATTaGAAAGCACCGTACAATGTC +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGRVVED*KAPYNV
Trigger: GACATTGTACGGTGCTTTGCAATCCTCAACCACTCT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGAGGCATCATGCTCTTTaGTCCACAGAGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKRHHAL*STEWLR
Trigger: CCTCAACCACTCTGTGGAGCAAAGAGCATGATGCCT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATCTGAGTCTCTTCCCTaGACATGTGAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLESESLP*TCERCP
Trigger: TGGGCACCTTTCACATGTGCAGGGAAGAGACTCAGA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAAGAAATGTACTTaGCTCGGACCTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAFKKCT*LGPLRG
Trigger: GCCTCGGAGAGGTCCGAGGCAAGTACATTTCTTAAA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGGAGGAGATGCACGACTaGCAAGTCACCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLREEMHD*QVTPTL
Trigger: CAGGGTGGGGGTGACTTGGCAGTCGTGCATCTCCTC...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGTGTTTACATGCTCGTaGACCTTATGGAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGVFTCS*TLWRGR
Trigger: CCTTCCCCTCCATAAGGTGCACGAGCATGTAAACAC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGACTACATCCGGGAGTaGCCGTCCATTCACAAAAAC +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEDYIRE*PSIHKN
Trigger: GTTTTTGTGAATGGACGGCCACTCCCGGATGTAGTC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTGAGAACATCCGTGTGCATCCATGTGCGCTTGTGCTTCCGCCTGGCAGCCCAAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: CENIRVHPCALVLPPGSPNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...TGGGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCACACGGATGTTCTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGTATCTTCAGGAGGGCTaGGTGGCTGTCACCCTCAAT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRYLQEG*VAVTLN
Trigger: ATTGAGGGTGACAGCCACCCAGCCCTCCTGAAGATA...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGAAAGTGTGCTCCTCTTaGAGAGGGGCCTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILKVCSS*RGASGG
Trigger: TCCCCCTGAGGCCCCTCTCCAAGAGGAGCACACTTT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCAGTCTCTCTCTGCCCTaGCTCTCTGCCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFSLSLP*LSAILV
Trigger: CACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGACT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGAGTCTCTCTCTGCCCTaGCTCTCTGCCATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILSLSLP*LSAILV
Trigger: CACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGACT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTCCCACAAGGGAAGTTaGGCTAGGTCTTTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLSHKGS*ARSFSR
Trigger: CCTGGAAAAAGACCTAGCCCAACTTCCCTTGTGGGA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGCAGGATCCAAAGATGTaGGTACACATCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQQDPKM*VHIIPK
Trigger: TTTTGGAATGATGTGTACCCACATCTTTGGATCCTG...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACCATTCAGAATTCTCTaGCATCTACTCAACGGCTTG +
Preference number: 4 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPPFRIL*HLLNGL
Trigger: CAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCCTGGTCAGGGATTATaGCATGGCCTTGAATTGACT +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLPGQGL*HGLELT
Trigger: AGTCAATTCAAGGCCATGCCATAATCCCTGACCAGG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTCCTGGTCAGGGATTATaGCATGGCCTTGAATTGACT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSPGQGL*HGLELT
Trigger: AGTCAATTCAAGGCCATGCCATAATCCCTGACCAGG...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEVTSGK*ISPLSA
Trigger: GGCACTGAGGGGTGAAATCCATTTACCAGAAGTCAC...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCGTGACTTCTGGTAAATaGATTTCACCCCTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSVTSGK*ISPLSA
Trigger: GGCACTGAGGGGTGAAATCCATTTACCAGAAGTCAC...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGCTGGGCAGTCGTTCTaGAGCGTGACTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRAGQSF*SVTSGK
Trigger: TTTACCAGAAGTCACGCTCCAGAACGACTGCCCAGC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCTTGGAGCTCAATTCTaGCTGAATGTCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRALGAQF*LNVMRR
Trigger: CCTCCTCATGACATTCAGCCAGAATTGAGCTCCAAG...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCTGTGTCAGGGTGCTTaGTTGGTTTTTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVLCQGA*LVFKIC
Trigger: GCAAATCTTAAAAACCAACCAAGCACCCTGACACAG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTTCTGGGCTTTCTGAATaGTGGCTACGTTTACCCATC +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEASGLSE*WLRLPI
Trigger: GATGGGTAAACGTAGCCACCATTCAGAAAGCCCAGA...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp CAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAAGGAATTAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: QVWTRALPGCSD*TRETMQGIKAP
Trigger: TGGGGCCTTAATTCCTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGAGCCCTTGTCCAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp TTTCCATTCAGAATTCTCTGGCATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPFRILWHLLNG*CPLEPSSPSSQ
Trigger: CTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATGCCAGAGAATTCTGAATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAGGCACCGGAGACTCCTaGATACCTTCGTCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRGTGDS*IPSSLL
Trigger: CAAGAGAGACGAAGGTATTCAGGAGTCTCCGGTGCC...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGAATCAATACCTCGGATaGCATTCTGCTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLNQYLG*HSASEK
Trigger: CTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATT...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGGTGTCCGAAGTGACCTaGACCTGGGCATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRVSEVT*TWACLR
Trigger: TCTGAGGCATGCCCAGGTTCAGGTCACTTCGGACAC...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCTCTACCTGGCTGTTCTaGCTTGACAAGAGAGACTAT +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRASTWLF*LDKRDY
Trigger: ATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGA...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTAGGACTCCACCTTGCTaGGCCTTAGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLRTPPC*ALVFSS
Trigger: AGAAGAGAAAACTAAGGCTCAGCAAGGTGGAGTCCT...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQNTKPI*GPAKPQ
Trigger: CTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATT...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGGGAAAGAGTCTGGATaGAACCTCAGAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLGKESG*NLRSTV
Trigger: AACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCATTATGGCATGGCCTTaGATTGACTCTGATACCCTC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSIMAWP*IDSDTL
Trigger: GAGGGTATCAGAGTCAATTCAAGGCCATGCCATAAT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTCTTCCCTGCACATGTaGAAGGTGCCCAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFSSLHM*KVPKQH
Trigger: GTGCTGCTTGGGCACCTTTCACATGTGCAGGGAAGA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCAGTCGTTCTGGAGCGTaGCTTCTGGTAAATGGATTT +
Preference number: 4 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRASRSGA*LLVNGF
Trigger: AAATCCATTTACCAGAAGTCACGCTCCAGAACGACT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCCTAGGAGTCGTGGCCTaGCTGTCCAACTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCLGVVA*LSNFPI
Trigger: TATTGGAAAGTTGGACAGTCAGGCCACGACTCCTAG...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGACTCTAGAATGGCAGTaGCATGATTCTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKTLEWQ*HDSEVP
Trigger: GGGAACCTCAGAATCATGTCACTGCCATTCTAGAGT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTTTGAGGCTTTGCTaGTTGTCCCTCAGTAGATAT +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAPLRLC*LSLSRY
Trigger: ATATCTACTGAGGGACAATCAGCAAAGCCTCAAAGG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGCCAAGTACCCTACCTaGGACGACTCCTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILAKYPT*DDSFEA
Trigger: AGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRKSPRI*FRRKSL
Trigger: CAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGATCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCT +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRSSTSS*CCVNKS
Trigger: AGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATACCAGGGCAGAGAGGATaGTCTGCCATAGGTCTAAGA +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIPGQRG*SAIGLR
Trigger: TCTTAGACCTATGGCAGAGCATCCTCTCTGCCCTGG...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCCTCGGATGACATTCTaGTTCGGAAAAGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKPRMTF*FGKVAE
Trigger: CTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGGTGGGCATGCATTGTaGGAAATTAGGCATCTGCCC +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRGGHAL*EIRHLP
Trigger: GGGCAGATGCCTAATTTCGCACAATGCATGCCCACC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAGAGTGGTTGAGGATTaGAAAGCACCGTACAATGTC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSRVVED*KAPYNV
Trigger: GACATTGTACGGTGCTTTGCAATCCTCAACCACTCT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATTGGTTTTTAAGATTTaGTTCCCTGGCTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSLVFKI*FPGLEL
Trigger: GAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAA...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTGCCTCTGTCTCTCCTaGCACAGGCCAAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRICLCLS*HRPSTL
Trigger: TAGGGTACTTGGCCTGTGGCAGGAGAGACAGAGGCA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCCACTCCAAGGGAAATaGGCCGTTTGTAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEPLQGK*AVCKSK
Trigger: TTTTGATTTACAAACGGCGCATTTCCCTTGGAGTGG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGTGTGTGTGTTTACATaGTCGTGCACCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLVCVFT*SCTLWR
Trigger: CCTCCATAAGGTGCACGAGCATGTAAACACACACAC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGACAAGTAAGCGTCTATaGAGGCATCACAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQTSKRL*RHHKLW
Trigger: CCAAAGTTTGTGATGCCTGCATAGACGCTTACTTGT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKTLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGGTGGTTATGATGGATaGATAGTCAGACAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEGGYDG*IVRQLE
Trigger: CTCCAGCTGTCTGACTATCCATCCATCATAACCACC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRVRDAS*VEQSSQ
Trigger: CTGAGAAGACTGCTCCACCCATGATGCATCTCGCAC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAATGGGGTCCTGGAGGGTaGGTGAAGTGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQWGPGG*VKCPWQ
Trigger: CTGCCATGGACACTTCACCCACCCTCCAGGACCCCA...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGAGAGATGATGGCACCTaGCACCCCCATGTCAAAATC +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRRDDGT*HPHVKI
Trigger: GATTTTGACATGGGGGTGCCAGGTGCCATCATCTCT...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGACCTTACCTGACAGGTaGAAGCTGCAGCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILTLPDR*KLQPAH
Trigger: GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGSPGVK*LSHKYK
Trigger: TTTGTATTTGTGAGACAACCACTTGACTCCTGGGCT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGTCAAGTTTGGCCCATaGACATTTTTCTTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAVKFGP*TFFFRP
Trigger: CGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGAC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAACCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACTTGGAGCTCAATTCTaGCTGAATGTCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKLGAQF*LNVMRR
Trigger: CCTCCTCATGACATTCAGCCAGAATTGAGCTCCAAG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGGCTTTCTGAATGGTaGCTACGTTTACCCATCTTG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEGLSEW*LRLPIL
Trigger: CAAGATGGGTAAACGTAGCCACCATTCAGAAAGCCC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCTGGCTATTGATTGGTTaGAATGTTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCWLLIG*NVQLSI
Trigger: AATGGAGAGTTGAACATTCCAACCAATCAATAGCCA...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp GCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AETQWPSGEAHR*AFRNRQASRSP
Trigger: TGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGATCTACCTGGCTGTTCTaGCTTGACAAGAGAGACTAT +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRSTWLF*LDKRDY
Trigger: ATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGA...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAGCAGTTCTTACAGACTaGTTGTCTAGGGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRAVLTD*LSRAWG
Trigger: GCCCCATGCCCTAGACAATCAGTCTGTAAGAACTGC...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCATTCCAAAAGAAGGGTaGCAGGGGGCAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFIPKEG*QGAEAQ
Trigger: TTGAGCCTCTGCCCCCTGTCACCCTTCTTTTGGAAT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAATTCCAAAAGAAGGGTaGCAGGGGGCAGAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRIPKEG*QGAEAQ
Trigger: TTGAGCCTCTGCCCCCTGTCACCCTTCTTTTGGAAT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLENTKPI*GPAKPQ
Trigger: CTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATT...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAGCCTCTATGTTGCCGTaGGAGCCCCAAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRASMLP*EPQMSI
Trigger: AATTGACATTTGGGGCTCTCACGGCAACATAGAGGC...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAGGGAAAGAGTCTGGATaGAACCTCAGAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKGKESG*NLRSTV
Trigger: AACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCC...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAATTCATTCAGGGGACTTaGGATTGTGATCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQFIQGT*DCDLCF
Trigger: GAAACACAGATCACAATCTCAAGTCCCCTGAATGAA...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAAGGCTGGGCTGGGGCTaGGGTTATTTGCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQRLGWG*GYLQDS
Trigger: ACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGCAGAGAGGATGCTCTaGCATAGGTCTAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIAERML*HRSKMS
Trigger: GGACATCTTAGACCTATGGCAGAGCATCCTCTCTGC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTTGCACATGTGAAAGGTaGCCAAGCAGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCCTCER*PSSTDL
Trigger: GAGGTCAGTGCTGCTTGGGCACCTTTCACATGTGCA...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGTTTCAGAGAAGCTGTTaGCTCATCAGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILFQRSC*LIRGAG
Trigger: GCCTGCTCCCCTGATGAGGCAACAGCTTCTCTGAAA...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGTGCCTCTGTCTCTCCTaGCACAGGCCAAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRCLCLS*HRPSTL
Trigger: TAGGGTACTTGGCCTGTGGCAGGAGAGACAGAGGCA...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACCACTCCAAGGGAAATaGGCCGTTTGTAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQPLQGK*AVCKSK
Trigger: TTTTGATTTACAAACGGCGCATTTCCCTTGGAGTGG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCCACTCCAAGGGAAATaGGCCGTTTGTAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSPLQGK*AVCKSK
Trigger: TTTTGATTTACAAACGGCGCATTTCCCTTGGAGTGG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATATGGCGACCTTTGGTTTaGATCCTCCAATTACCCCAG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIWRPLV*ILQLPQ
Trigger: CTGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCA...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGGGTGTGGCGACCTTTaGTTTGGATCCTCCAATTAC +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIGCGDL*FGSSNY
Trigger: GTAATTGGAGGATCCAAACCAAAGGTCGCCACACCC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILVRDAS*VEQSSQ
Trigger: CTGAGAAGACTGCTCCACCCATGATGCATCTCGCAC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGGTGACATACAGATATaGGGGACATTGTCACCTAAG +
Preference number: 4 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLGDIQI*GTLSPK
Trigger: CTTAGGTGACAATGTCCCCCATATCTGTATGTCACC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGGTGACATACAGATATaGGGGACATTGTCACCTAAG +
Preference number: 4 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEGDIQI*GTLSPK
Trigger: CTTAGGTGACAATGTCCCCCATATCTGTATGTCACC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTESPGVK*LSHKYK
Trigger: TTTGTATTTGTGAGACAACCACTTGACTCCTGGGCT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGCACTGTTGTGGATTTaGTCAAAGACTCCGCAGGTT +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRALLWI*SKTPQV
Trigger: AACCTGCGGAGTCTTTGACCAAATCCACAACAGTGC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCTCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGSEALL*IWSKTP
Trigger: CGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGA...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTCAAGTTTGGCCCATaGACATTTTTCTTTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGEVKFGP*TFFFRP
Trigger: CGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGAC...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCTTGGAGCTCAATTCTaGCTGAATGTCATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRLGAQF*LNVMRR
Trigger: CCTCCTCATGACATTCAGCCAGAATTGAGCTCCAAG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATGCTCGTGCACCTTATaGAGGGGAAGGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRCSCTL*RGRPDS
Trigger: AGAATCTGGCCTTCCCCTCCATAAGGTGCACGAGCA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGAATCAATACCTCGGATaGCATTCTGCTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKNQYLG*HSASEK
Trigger: CTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATT...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACTGGCTGTTCTGACTTaGCAAGAGAGACTATGCAAG +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRLAVLT*QERLCK
Trigger: CTTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAG...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAAAAAATACAAAACCAATCTaGGGACCAGCAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LEPQGGQDPKMWVHIIPKNTKPI*GPAKPQ
Trigger: CTGAGGCTTTGCTGGTCCTCAGATTGGTTTTGTATT...TTTTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAGGTTGGAGCTAGACTaGTGGTATGAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: VYWFAETQWPSGEAHRLARLELD*WYEKFS
Trigger: TGAAAATTTCTCATACCATCAGTCTAGCTCCAACCT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCCTAGGAGTCGTGGCCTaGCTGTCCAACTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRILGVVA*LSNFPI
Trigger: TATTGGAAAGTTGGACAGTCAGGCCACGACTCCTAG...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGGGGGACCCCTTGGATTaGAACTCTAGAATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRGDPLD*NSRMAV
Trigger: CACTGCCATTCTAGAGTTTCAATCCAAGGGGTCCCC...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQSTSSC*CVNKSP
Trigger: GGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTAGAGTGGTTGAGGATTaGAAAGCACCGTACAATGTC +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFRVVED*KAPYNV
Trigger: GACATTGTACGGTGCTTTGCAATCCTCAACCACTCT...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAACTTCGCCTCTATGTTaGCGTGAGAGCCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRTSPLC*RESPKC
Trigger: ACATTTGGGGCTCTCACGGCAACATAGAGGCGAAGT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTCTGAGTCTCTTCCCTaGACATGTGAAAGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRISESLP*TCERCP
Trigger: TGGGCACCTTTCACATGTGCAGGGAAGAGACTCAGA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATCTACGCCAATCTTATTaGATGTTTCTCCAACTAATC +
Preference number: 4 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHLRQSY*MFLQLI
Trigger: GATTAGTTGGAGAAACATGCAATAAGATTGGCGTAG...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCAGGACTTGATGGAATaGACAGGGAAAAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRQDLME*TGKSFH
Trigger: GTGGAAACTTTTCCCTGTCCATTCCATCAAGTCCTG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
CDS-3UTR CCA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAGGAAGGAAAGAGCTGTaGGGTGGCCCTACAGATGAC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQGRKEL*GGPTDD
Trigger: GTCATCTGTAGGGCCACCCCACAGCTCTTTCCTTCC...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTTTCTTGTTTCCCACTTaGTCCAAATATTATTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLFLFPT*SKYYWA
Trigger: GGCCCAATAATATTTGGACCAAGTGGGAAACAAGAA...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAATTCTTGTTTCCCACTTaGTCCAAATATTATTGGGCC +
Preference number: 4 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQFLFPT*SKYYWA
Trigger: GGCCCAATAATATTTGGACCAAGTGGGAAACAAGAA...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGAGCCCAGGAGTCAAGTaGTTGTCTCACAAATACAAA +
Preference number: 4 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKSPGVK*LSHKYK
Trigger: TTTGTATTTGTGAGACAACCACTTGACTCCTGGGCT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTT +
Preference number: 4 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCRENGA*RSENSL
Trigger: AAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCT...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAAGCTGGGAAAGAGTCTaGATGAAACCTCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRSWERV*MKPQKH
Trigger: GTGCTTCTGAGGTTTCATCCAGACTCTTTCCCAGCT...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGACTGTGTCAGGGTGCTTaGTTGGTTTTTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: WFAETQWPSGEAHRLAFRLCQGA*LVFKIC
Trigger: GCAAATCTTAAAAACCAACCAAGCACCCTGACACAG...TCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAATGCATGTGTCTTCCTaGCAAAGGTTTCCATTTGCA +
Preference number: 4 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKMHVSS*QRFPFA
Trigger: TGCAAATGGAAACCTTTGCCAGGAAGACACATGCAT...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACACATCTTTGGCAAATTaGCACTGCTGTAATTACATT +
Preference number: 4 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDTSLAN*HCCNYI
Trigger: AATGTAATTACAGCAGTGCCAATTTGCCAAAGATGT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCAGGACTCCACCTTGCTaGGCCTTAGTTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFRTPPC*ALVFSS
Trigger: AGAAGAGAAAACTAAGGCTCAGCAAGGTGGAGTCCT...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGAGTAACAGCCACTCATaGAAAGACACACAGATATTG +
Preference number: 4 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLSNSHS*KDTQIL
Trigger: CAATATCTGTGTGTCTTTTCATGAGTGGCTGTTACT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGGGGCTGCGGTTATTTaGAGGACAGTCTATTGGTTT +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFGAAVI*RTVYWF
Trigger: AAACCAATAGACTGTCCTGCAAATAACCGCAGCCCC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGTTGGTTTTTAAGATTTaGTTCCCTGGCTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRLVFKI*FPGLEL
Trigger: GAGCTCCAAGCCAGGGAAGCAAATCTTAAAAACCAA...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAATTTCAGAGAAGCTGTTaGCTCATCAGGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQFQRSC*LIRGAG
Trigger: GCCTGCTCCCCTGATGAGGCAACAGCTTCTCTGAAA...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGGTGTGTGTGTTTACATaGTCGTGCACCTTATGGAGG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILVCVFT*SCTLWR
Trigger: CCTCCATAAGGTGCACGAGCATGTAAACACACACAC...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCTACGCCAATCTTATTaGATGTTTCTCCAACTAATC +
Preference number: 4 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSLRQSY*MFLQLI
Trigger: GATTAGTTGGAGAAACATGCAATAAGATTGGCGTAG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGACACTATGCTGTGACTaGAAGCTGGGACTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRTLCCD*KLGLVG
Trigger: ACCAACCAGTCCCAGCTTCCAGTCACAGCATAGTGT...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAGTGCGAGATGCATCATaGGTGGAGCAGTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQVRDAS*VEQSSQ
Trigger: CTGAGAAGACTGCTCCACCCATGATGCATCTCGCAC...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGATTTGTGATCTGGGTGTaGGGGAAAGTCCTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRFVIWV*GKVLCV
Trigger: AACACAGAGGACTTTCCCCCACACCCAGATCACAAA...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATATCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEISEALL*IWSKTP
Trigger: CGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGA...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTTTGCTTCCCTGGCTTaGAGCTCAATTCTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIFASLA*SSILAE
Trigger: TTCAGCCAGAATTGAGCTCCAAGCCAGGGAAGCAAA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
3UTR CAA 72 bp TCCATCATCCAAAATCACTTGTTCTTAATGATGCTTTaGGAGAAGATGAGGGACGTGGCCACAGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SIIQNHLFLMML*EKMRDVATGMV
Trigger: CACCATGCCTGTGGCCACGTCCCTCATCTTCTCCAAAAGCATCATTAAGAACAAGTGATTTTGGATGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTCTACCTGGCTGTTCTaGCTTGACAAGAGAGACTAT +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRISTWLF*LDKRDY
Trigger: ATAGTCTCTCTTGTCAAGTCAGAACAGCCAGGTAGA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAATTTCTGGGCTTTCTaGATGGTGGCTACGTTTACC +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRNFWAF*MVATFT
Trigger: GGTAAACGTAGCCACCATTCAGAAAGCCCAGAAATT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAACAAGGCTCAAAGAGGTaGAGGGTTTTGTCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQQGSKR*RVLSEV
Trigger: GACCTCAGACAAAACCCTGCACCTCTTTGAGCCTTG...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACTACGCCAATCTTATTaGATGTTTCTCCAACTAATC +
Preference number: 4 (lower is better)
Translates to: VICRTVYWFAETQWPSGELRQSY*MFLQLI
Trigger: GATTAGTTGGAGAAACATGCAATAAGATTGGCGTAG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCGGTGACATACAGATATaGGGGACATTGTCACCTAAG +
Preference number: 4 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFGDIQI*GTLSPK
Trigger: CTTAGGTGACAATGTCCCCCATATCTGTATGTCACC...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTCAGGATCCAAAGATGTaGGTACACATCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFQDPKM*VHIIPK
Trigger: TTTTGGAATGATGTGTACCCACATCTTTGGATCCTG...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTAGAGAGAATGGGGCCTaGAGATCTGAGAATTCACTT +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCRENGA*RSENSL
Trigger: AAGTGAATTCTCAGATCTCCAGGCCCCATTCTCTCT...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTCAGAAGCACTGTTGTaGATTTGGTCAAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: KSSVLIIVYITGTGLPRISEALL*IWSKTP
Trigger: CGGAGTCTTTGACCAAATCCACAACAGTGCTTCTGA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCTGGCTATTGATTGGTTaGAATGTTCAACTCTCCATT +
Preference number: 4 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGWLLIG*NVQLSI
Trigger: AATGGAGAGTTGAACATTCCAACCAATCAATAGCCA...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTACATCTTTGGCAAATTaGCACTGCTGTAATTACATT +
Preference number: 4 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSTSLAN*HCCNYI
Trigger: AATGTAATTACAGCAGTGCCAATTTGCCAAAGATGT...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAACTTCGGAAAAGTAGCTaGGGAATCTCCCAGACAGTT +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQLRKSS*GISQTV
Trigger: AACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAG...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGAATCAATACCTCGGATaGCATTCTGCTTCGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILNQYLG*HSASEK
Trigger: CTTTTCCGAAGCAGAATGTCATCCGAGGTATTGATT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAACTCTAGAATGGCAGTaGCATGATTCTGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQTLEWQ*HDSEVP
Trigger: GGGAACCTCAGAATCATGTCACTGCCATTCTAGAGT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGAGAACCATCTCTCACTaGTCTTACTGTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRRTISH*SYCQLS
Trigger: GGAGAGTTGACAGTAAGAGCAGTGAGAGATGGTTCT...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRNMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCCAGTGGGTCAAGTTTaGCCCATGGACATTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRPVGQV*PMDIFL
Trigger: AAGAAAAATGTCCATGGGCCAAACTTGACCCACTGG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTAGTAACAGCCACTCATaGAAAGACACACAGATATTG +
Preference number: 4 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCSNSHS*KDTQIL
Trigger: CAATATCTGTGTGTCTTTTCATGAGTGGCTGTTACT...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR GCA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACTACGCCAATCTTATTaGATGTTTCTCCAACTAATC +
Preference number: 4 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRLRQSY*MFLQLI
Trigger: GATTAGTTGGAGAAACATGCAATAAGATTGGCGTAG...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAAACATGGTGGGATTTTaGCGTTTATATTCAGCGATT +
Preference number: 4 (lower is better)
Translates to: LQRPSGHREKLIDWLLEINMVGF*RLYSAI
Trigger: AATCGCTGAATATAAACGCCAAAATCCCACCATGTT...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAAGAAGGTATTTACATaGGTGCTGCTGAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRKKVFT*VLLKQQ
Trigger: TTGTTGCTTCAGCAGCACCCATGTAAATACCTTCTT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCAGGATCCAAAGATGTaGGTACACATCATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PALTFKVHNVINTSDDILQDPKM*VHIIPK
Trigger: TTTTGGAATGATGTGTACCCACATCTTTGGATCCTG...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGTTCTTGTTTCCCACTTaGTCCAAATATTATTGGGCC +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRFLFPT*SKYYWA
Trigger: GGCCCAATAATATTTGGACCAAGTGGGAAACAAGAA...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR TCA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAAGGTTGGAGCTAGACTaGTGGTATGAGAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQRLELD*WYEKFS
Trigger: TGAAAATTTCTCATACCATCAGTCTAGCTCCAACCT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CCA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGACATCTTTGGCAAATTaGCACTGCTGTAATTACATT +
Preference number: 4 (lower is better)
Translates to: LTFKVHNVINTSDDILLRTSLAN*HCCNYI
Trigger: AATGTAATTACAGCAGTGCCAATTTGCCAAAGATGT...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS CCA 90 bp ACTGCGGGCCTGGCACACTGCTCCCGATGTCAGCAGGGGTGGGGCTaGCCAGATTGGCCTTCATGTCGTCCAGCCCACCAGCCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: TAGLAHCSRCQQGWG*PDWPSCRPAHQPAR
Trigger: CCTCGCTGGCTGGTGGGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520083.1
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000524340.5
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GGSSGGSAIIVGGAKQPRSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...CCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS CCA 90 bp CTGGCACACTGCTCCCGATGTCAGCAGGGGTGGGGCTGGCCAGATTaGCCTTCATGTCGTCCAGCCCACCAGCCAGCGAGGCCATGGCTG +
Preference number: 5 (lower is better)
Translates to: LAHCSRCQQGWGWPD*PSCRPAHQPARPWL
Trigger: CAGCCATGGCCTCGCTGGCTGGTGGGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCGGGAGCAGTGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520083.1
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000524340.5
ENST00000651550.1
CDS CCA 90 bp GGTAGGACTGCGGGCCTGGCACACTGCTCCCGATGTCAGCAGGGGTaGGGCTGGCCAGATTGGCCTTCATGTCGTCCAGCCCACCAGCCA +
Preference number: 5 (lower is better)
Translates to: GRTAGLAHCSRCQQG*GWPDWPSCRPAHQP
Trigger: TGGCTGGTGGGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCGGGAGCAGTGTGCCAGGCCCGCAGTCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520083.1
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000524340.5
ENST00000651550.1
CDS-3UTR CAA 90 bp CGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLLGRQRYNSRGSQAAPGSSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...ACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGATCCTCAGCCCAACCTaGGAGGCCCAGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKILSPT*EAQQLG
Trigger: CCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGAT...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS TCA 90 bp GTCCGTGAGAGGAGCGCTCATCTCACAGGAGGCTGTGGTAATGGGTaGATTGGCAGGATCCCTGCGGGCCAGGCAGCCAGGCCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VRERSAHLTGGCGNG*IGRIPAGQAARPAL
Trigger: CAAGGCCGGCCTGGCTGCCTGGCCCGCAGGGATCCTGCCAATTCACCCATTACCACAGCCTCCTGTGAGATGAGCGCTCCTCTCACGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS-3UTR CAA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp CTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LQVGRLLGRQRYNSRGSQGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...TTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GASGKWGMLGDGLMGSLASLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CGGCTGCAGGTGGGGCGGCTCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RLQVGRLLGRQRYNSRGSIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...GCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGAGCCGCCCCACCTGCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGTGGGGCTGGCCAGATaGGCCTTCATGTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAVGLAR*AFMSSS
Trigger: GCTGGACGACATGAAGGCCAATCTGGCCAGCCCCAC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCCTCGGGCGGCAGCGCTATAATAGTAGGGGGAGCCAAGCAGCCCCGGGTTGGGAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: SSGGSAIIVGGAKQPRVGRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...CCCAACCCGGGGCTGCTTGGCTCCCCCTACTATTATAGCGCTGCCGCCCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CAA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: MRDVATGMVILGTRATSGPPSAC*EVEGLP
Trigger: GGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGACCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: TLVALAWALLHTVTARPGPTPIC*LGSGGP
Trigger: AGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGG...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTCCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LHRTVWCAARVARLHHPVPTPIC*LGSGGP
Trigger: AGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGG...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGAGGGAACACCATGGGTaGGGGGTCAGGAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: LEPSSPSSQAAPLDHEVLREHHG*GVRSPS
Trigger: ACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCT...CAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGCCGTGGGGCAGGAGTaGGTTTCCACCCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGAVGQE*VSTLPG
Trigger: TCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGGC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCACGGCCTGCTCGGGCTaGATGGGCTCTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAITACSG*MGSVVV
Trigger: CACCACCACAGAGCCCATCAAGCCCGAGCAGGCCGT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS GCA 90 bp TCCAGCACCTCCAGCTGCTGCTGTGTGAACAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTGCCCGGAAGCGAGTGGCCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: SSTSSCCCVNKSPRI*FRRKSLPGSEWPFG
Trigger: GCCGAACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520154.6
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000523241.6
ENST00000523493.5
ENST00000524340.5
ENST00000651550.1
CDS-3UTR CAA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LHRTVWCAARVARLHHPVGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QAPRQLRWTTRCCELVRASLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPASSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGCCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTEPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTGCATCCATGTGCGCTaGTGCTTCCGCCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAICIHVR*CFRLAA
Trigger: GGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCA...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGTGGTAATGGGTGAATaGGCAGGATCCCTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LHRTVWCAARVARLHHPVVVMGE*AGSLRA
Trigger: GGCCCGCAGGGATCCTGCCAATTCACCCATTACCAC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTACTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ELQASGGCWGTVSWALWLLGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...TAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVSSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTGCAGCATCCTCCATCTaGAGGACAGCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAAASSI*RTALSA
Trigger: TGCGCTCAGAGCTGTCCTCAAGATGGAGGATGCTGC...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: GKWGMLGDGLMGSLAIFRLPRIH*LGSWRV
Trigger: CACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAA...CCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCPTPIC*LGSGGP
Trigger: AGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCAGAATCCACTTGCTGGGGTCCTGGAGGGTGGGTGAAGTGTCCATGGCAGGTGGGACAGCACATGACCTaGGCACCTGGACCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: PESTCWGPGGWVKCPWQVGQHMT*APGPLE
Trigger: CTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCC...CACCTGCCATGGACACTTCACCCACCCTCCAGGACCCCAGCAAGTGGATTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTGGACAGCACATGACCTaGGCACCTGGACCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCGQHMT*APGPLE
Trigger: CTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCC...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGACCTGGTGGCCCTGGCTaGGGCACTCCTGCATACTGT +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGPGGPG*GTPAYC
Trigger: ACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGG...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACCTGGTGGCCCTGGCTaGGGCACTCCTGCATACTGT +
Preference number: 5 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGPGGPG*GTPAYC
Trigger: ACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS TCA 90 bp CACGGCCTGCTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HGLLGLDGLCGGEDV*VVLPLKHAVQHLQL
Trigger: CAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS TCA 90 bp GGGAGCCTGCTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GSLLGLDGLCGGEDV*VVLPLKHAVQHLQL
Trigger: CAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520154.6
CDS-3UTR CAA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGILGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGCACCGTACTGTCTGGTGCGCTGCCCGAGTGGCAAGGCTACACCACCCCGTTGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: LHRTVWCAARVARLHHPVAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...AACGGGGTGGTGTAGCCTTGCCACTCGGGCAGCGCACCAGACAGTACGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTESSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp ACCCTGGTGGCCCTGGCTTGGGCACTCCTGCATACTGTCACAGCCAGGCCTGGATCATTCAGCCCAGGTTaGGACAAGGGCTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: TLVALAWALLHTVTARPGSFSPG*DKGSTW
Trigger: CCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGA...TCCAGGCCTGGCTGTGACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTCATTCAGCCCAGGTTaGGACAAGGGCTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLSFSPG*DKGSTW
Trigger: CCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGAACGGCTTGTGTCCTTaGGAGCCATCCTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: GGCWGTVSWALWLSSGGLNGLCP*EPSSPS
Trigger: GCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT...CAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGGCCGTGGGGCAGGAGTaGGTTTCCACCCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: AGAAVICRTVYWFAETQWAVGQE*VSTLPG
Trigger: TCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGGC...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGC +
Preference number: 5 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGTGMVI*GTRATS
Trigger: GCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGT...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGC +
Preference number: 5 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAITGMVI*GTRATS
Trigger: GCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGGAGCCTGCTCGGGCTaGATGGGCTCTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEGACSG*MGSVVV
Trigger: CACCACCACAGAGCCCATCAAGCCCGAGCAGGCTCC...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520154.6
CDS TCA 90 bp GCACCACTGCTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: APLLGLDGLCGGEDV*VVLPLKHAVQHLQL
Trigger: CAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523493.5
ENST00000524340.5
CDS TCA 90 bp CACTCCCTGCTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: HSLLGLDGLCGGEDV*VVLPLKHAVQHLQL
Trigger: CAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGGGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523241.6
CDS CCA 90 bp CCAGATTGGCCTTCATGTCGTCCAGCCCACCAGCCAGCGAGGCCATaGCTGAATACTCTGTGGTCTGGAAAAGGACTGCCTGGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PDWPSCRPAHQPARP*LNTLWSGKGLPGAA
Trigger: TGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTGGTGGGCTGGACGACATGAAGGCCAATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS-3UTR CAA 90 bp GCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTGGCGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: AGWLSPSIGAISVWCPPGVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...GCCAGGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCCCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCTGCATCCATGTGCGCTaGTGCTTCCGCCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSCIHVR*CFRLAA
Trigger: GGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCA...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCAACGGCTTGTGTCCTTaGGAGCCATCCTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: ASGKWGMLGDGLMGSLAINGLCP*EPSSPS
Trigger: GCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT...GATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCATCCTCAGCCCAACCTaGGAGGCCCAGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLILSPT*EAQQLG
Trigger: CCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGAT...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS TCA 90 bp TGTGGTCTGCTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATGTCTaGGTAGTGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: CGLLGLDGLCGGEDV*VVLPLKHAVQHLQL
Trigger: CAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCACTACTCAGACATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000651550.1
CDS GCA 90 bp ATGGAGTACGACGAGCCGGCCGAATCCGTGCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGACACTGCCAAGAATTTTGCTGACACA +
Preference number: 5 (lower is better)
Translates to: MEYDEPAESVLTEDT*VTEPVDTAKNFADT
Trigger: TGTGTCAGCAAAATTCTTGGCAGTGTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCTCGTCGTACTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651199.1
CDS-3UTR CAA 90 bp GGAGCTTCAGGCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: GASGKWGMLGDGLMGSLAWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...AGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGCCTGAAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: LGDGLMGSLAIFRRAGWLWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...CAGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGCTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLLGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp TCAGTGTTTGGTGCCCGCCTGGCTCCAAGGGTCAGTGACGGTCATAGGCAGTGGATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: SVFGARLAPRVSDGHRQWIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...CCACTGCCTATGACCGTCACTGACCCTTGGAGCCAGGCGGGCACCAAACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTCCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAERCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVLVQIL*GLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCCCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: MRDVATGMVILGTRATSGPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTAGGGAACACCATGGGTaGGGGGTCAGGAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPREHHG*GVRSPS
Trigger: ACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCT...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCAGGGAACACCATGGGTaGGGGGTCAGGAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAREHHG*GVRSPS
Trigger: ACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCT...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGTGAGGCCCCGGACTaGTGTTTTCCATTCAGAATT +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAGEAPD*CFPFRI
Trigger: AATTCTGAATGGAAAACACAAGTCCGGGGCCTCACC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTG +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGDSRQE*AWGDSV
Trigger: CACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTC...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCAGGAGTCGTTGTACGAGGAATACTGAGGGTGGCTGTAGGGACTCCCGGAAAACACCACTGCTCGGGCTaGATGGGCTCTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PGVVVRGILRVAVGTPGKHHCSG*MGSVVV
Trigger: CACCACCACAGAGCCCATCAAGCCCGAGCAGTGGTG...TTTTCCGGGAGTCCCTACAGCCACCCTCAGTATTCCTCGTACAACGACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523493.5
CDS GCA 90 bp CACAGACAGCTAAAGAGTCTGGCCCTGGGACTTCCAGAGGGAAGCTaGTTGGCATCCACCATGCACCATCCAGCTTACGCCACCTACCCT +
Preference number: 5 (lower is better)
Translates to: HRQLKSLALGLPEGS*LASTMHHPAYATYP
Trigger: AGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGACTCTTTAGCTGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CCA 90 bp AGCGAGGCCATGGCTGAATACTCTGTGGTCTGGAAAAGGACTGCCTaGGGCTGCACCAAGTATTGTCTCATCAGCACGGGGCACCACTGC +
Preference number: 5 (lower is better)
Translates to: SEAMAEYSVVWKRTA*GCTKYCLISTGHHC
Trigger: GCAGTGGTGCCCCGTGCTGATGAGACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCATGGCCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS CCA 90 bp TGTCGTCCAGCCCACCAGCCAGCGAGGCCATGGCTGAATACTCTGTaGTCTGGAAAAGGACTGCCTGGGGCTGCACCAAGTATTGTCTCA +
Preference number: 5 (lower is better)
Translates to: CRPAHQPARPWLNTL*SGKGLPGAAPSIVS
Trigger: TGAGACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTGGTGGGCTGGACGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS-3UTR CAA 90 bp CAAGCTCCCAGGCAGCTCCGCTGGACCACGAGGTGCTGTGAATTGGTGAGAGCGTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: QAPRQLRWTTRCCELVRAWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...CGCTCTCACCAATTCACAGCACCTCGTGGTCCAGCGGAGCTGCCTGGGAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: KQPRVGEPPGVVVRGILRAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...CCTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAGTGGGGCTGGCCAGATaGGCCTTCATGTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSVGLAR*AFMSSS
Trigger: GCTGGACGACATGAAGGCCAATCTGGCCAGCCCCAC...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGGTGGGGCTGGCCAGATaGGCCTTCATGTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLVGLAR*AFMSSS
Trigger: GCTGGACGACATGAAGGCCAATCTGGCCAGCCCCAC...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGATTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCACAGGTGGGCATGCATaGTGCGAAATTAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPATGGHA*CEIRHL
Trigger: CAGATGCCTAATTTCGCACAATGCATGCCCACCTGT...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTCCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAPPSAC*EVEGLP
Trigger: GGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGG...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAPPSAC*EVEGLP
Trigger: GGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: KWGMLGDGLMGSLAIFRRLVQIL*GLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA...CCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESNYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGGGACAGCACATGACCTaGGCACCTGGACCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEGQHMT*APGPLE
Trigger: CTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCC...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGCCGTGGGGCAGGAGTaGGTTTCCACCCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKAVGQE*VSTLPG
Trigger: TCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGGC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGCCGTGGGGCAGGAGTaGGTTTCCACCCTCCCGGGA +
Preference number: 5 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGAVGQE*VSTLPG
Trigger: TCCCGGGAGGGTGGAAACCAACTCCTGCCCCACGGC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGC +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAETGMVI*GTRATS
Trigger: GCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS GCA 90 bp GTCTGGCCCTGGGACTTCCAGAGGGAAGCTGCTTGGCATCCACCATaGACCATCCAGCTTACGCCACCTACCCTTCTTGACTCAGATTCT +
Preference number: 5 (lower is better)
Translates to: VWPWDFQREAAWHPP*TIQLTPPTLLDSDS
Trigger: AGAATCTGAGTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS-3UTR CAA 90 bp CAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGAGGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: QAAPGWGTSRSRCTRNTEVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...CTCAGTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATACTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: EPSSPGLGNLQESLYEEYWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...GTATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCCTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLLGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGCCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGATTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGGCAGCATCCTCCATCTaGAGGACAGCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVAASSI*RTALSA
Trigger: TGCGCTCAGAGCTGTCCTCAAGATGGAGGATGCTGC...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGCCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVPGCSD*TRETMQ
Trigger: TTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGG...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCCCCCATCTGCTTGCTaGGAAGTGGAGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLPPSAC*EVEGLP
Trigger: GGGCAGGCCCTCCACTTCCAAGCAAGCAGATGGGGG...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAGGGAACACCATGGGTaGGGGGTCAGGAGCCCGAGT +
Preference number: 5 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTEREHHG*GVRSPS
Trigger: ACTCGGGCTCCTGACCCCCAACCCATGGTGTTCCCT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDNYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVNYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCACGAGGTGCTGTGAATaGGTGAGAGCGGGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLTRCCE*VRAGVC
Trigger: ACACACGCCCGCTCTCACCAATTCACAGCACCTCGT...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGAGGTGAGGCCCCGGACTaGTGTTTTCCATTCAGAATT +
Preference number: 5 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGGEAPD*CFPFRI
Trigger: AATTCTGAATGGAAAACACAAGTCCGGGGCCTCACC...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGTTTCTACCCCTGCCTaGCTGGACACCCTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: QAPSHHCHSAQVWTRALPVSTPA*LDTLKH
Trigger: GTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAAC...AGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCGTTTCTACCCCTGCCTaGCTGGACACCCTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAVSTPA*LDTLKH
Trigger: GTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAAC...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCAAGGCTACACCACCCCGTTCACCCAGGAAGCAGTTCATTCAGGGGACTTGGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTG +
Preference number: 5 (lower is better)
Translates to: WQGYTTPFTQEAVHSGDLDSRQE*AWGDSV
Trigger: CACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTC...CAAGTCCCCTGAATGAACTGCTTCCTGGGTGAACGGGGTGGTGTAGCCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGCAGGCATCACAAACTTaGGCGGATACAGTAGATATG +
Preference number: 5 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKQASQT*ADTVDM
Trigger: CATATCTACTGTATCCGCCAAAGTTTGTGATGCCTG...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ICRTVYWFAETQWPSGEALGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLSSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAATCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLQRPSGHREKLIDWLLESSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAATCGTCTCTCTTGCGCTaGTTGGTGTCGGCGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKSSLLR*LVSALG
Trigger: CCCCAGCGCCGACACCAACAAGCGCAAGAGAGACGA...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGTGGGGCTGGCCAGATaGGCCTTCATGTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLVGLAR*AFMSSS
Trigger: GCTGGACGACATGAAGGCCAATCTGGCCAGCCCCAC...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000377853.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTERCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLARCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTAGGTGCCATCAGTGTTaGGTGCCCGCCTGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLRCHQC*VPAWLQ
Trigger: TTGGAGCCAGGCGGGCACCAAACACTGATGGCACCT...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLALPRIH*LGSWRV
Trigger: CACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACATCACCGGAACAGGCTaGCCCAGAATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RLGWGCGYLQDSLLVCRDITGTG*PRIHLL
Trigger: CAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGAT...GTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAAGAGGTGCAGGGTTTaGTCTGAGGTCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: AGLGLRLFAGQSIGLQRPKRCRV*SEVPQQ
Trigger: TTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTT...GGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAACCCACCCCCATCTGCTaGCTTGGAAGTGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEPTPIC*LGSGGP
Trigger: AGGCCCTCCACTTCCAAGCAAGCAGATGGGGGTGGG...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCATCTTGAGGACAGCTCTGAGCGCACCTGCCAGGGTCACCCAGGGCAGAGACCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACC +
Preference number: 5 (lower is better)
Translates to: LHLEDSSERTCQGHPGQRPGVKW*SHKYKT
Trigger: GGTTTTGTATTTGTGAGACAACCACTTGACTCCTGG...TCTCTGCCCTGGGTGACCCTGGCAGGTGCGCTCAGAGCTGTCCTCAAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTGCATCCATGTGCGCTaGTGCTTCCGCCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLCIHVR*CFRLAA
Trigger: GGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGACGAGGTGCTGTGAATaGGTGAGAGCGGGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPETRCCE*VRAGVC
Trigger: ACACACGCCCGCTCTCACCAATTCACAGCACCTCGT...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGCTGACGAGGTGCTGTGAATaGGTGAGAGCGGGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: KLSFPGWGGYDGWIVRQLTRCCE*VRAGVC
Trigger: ACACACGCCCGCTCTCACCAATTCACAGCACCTCGT...CAGCTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACCTGGTGGCCCTGGCTaGGGCACTCCTGCATACTGT +
Preference number: 5 (lower is better)
Translates to: VICRTVYWFAETQWPSGEPGGPG*GTPAYC
Trigger: ACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGTTTCTACCCCTGCCTaGCTGGACACCCTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPVSTPA*LDTLKH
Trigger: GTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAAC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGACAGGCATGGTGATTTaGGGGACAAGGGCGACCAGC +
Preference number: 5 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQTGMVI*GTRATS
Trigger: GCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGT...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTTTCTTAATGATGCTTTaGGAGAAGATGAGGGACGTG +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAFLMML*EKMRDV
Trigger: CACGTCCCTCATCTTCTCCAAAAGCATCATTAAGAA...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTG +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPDSRQE*AWGDSV
Trigger: CACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTC...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTCTCTCCTGCCACAGGCCAAGTACCCTACCTGAGACGACTCCTTTGAGGCTTGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: CLSCHRPSTLPETTPLRLVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...AAGCCTCAAAGGAGTCGTCTCAGGTAGGGTACTTGGCCTGTGGCAGGAGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGCTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLLGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGCTGGGACTGGTTGGTaGGGTGGCTGCTGTACTTTT +
Preference number: 5 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHAGTGW*GGCCTF
Trigger: AAAAGTACAGCAGCCACCCAACCAACCAGTCCCAGC...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGATCACCGGAACAGGCTaGCCCAGAATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEITGTG*PRIHLL
Trigger: CAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGAT...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGAAGAGGTGCAGGGTTTaGTCTGAGGTCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: AGAAVICRTVYWFAETQWKRCRV*SEVPQQ
Trigger: TTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTT...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: AGAAVICRTVYWFAETQWLVQIL*GLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA...CCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CACCCCCACCAGTCACTGCTTGAGGACTCCACCTTGCTGAGCCTTAGTTTTCTCCCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: HPHQSLLEDSTLLSLSFLPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAGCAGTGACTGGTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCCTTGAGGACTCCACCTaGCTGAGCCTTAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSLEDST*LSLSFL
Trigger: GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAG...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTGCCCAGTGGGTCAAGTTTGGCCCATGGACATTTTTCTTTAGGCCGACAGAAAACTACCTCCCTTCTTaGCCCCGCAGGTTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GAQWVKFGPWTFFFRPTENYLPS*PRRFWV
Trigger: CACCCAGAACCTGCGGGGCAAAGAAGGGAGGTAGTT...TTCTGTCGGCCTAAAGAAAAATGTCCATGGGCCAAACTTGACCCACTGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCCTGGCTCCTGGACCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACC +
Preference number: 5 (lower is better)
Translates to: LLPYLTGGSCSQLTLAPGPGVKW*SHKYKT
Trigger: GGTTTTGTATTTGTGAGACAACCACTTGACTCCTGG...TCCAGGAGCCAGGGTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAAACGGCTTGTGTCCTTaGGAGCCATCCTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPNGLCP*EPSSPS
Trigger: GCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGCACTGTTGTGGATTaGGTCAAAGACTCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: RQAGLGLRLFAGQSIGLQSTVVD*VKDSAG
Trigger: ACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCT...CTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCGGACAGCACATGACCTaGGCACCTGGACCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCGQHMT*APGPLE
Trigger: CTCCAGGGGTCCAGGTGCCAAGGTCATGTGCTGTCC...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGTGTCAGGGTGCTTGGTaGGTTTTTAAGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: MLGDGLMGSLAIFRRAGWCQGAW*VFKICF
Trigger: GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACA...CCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGGAGAAATGCCCCAGGCCTTCTGCCACGATGCTGGTGAGGCCCCGGACTTGTCATTTTCTCCTTGTGTaGCTCAGGGGTCTAAGATGT +
Preference number: 5 (lower is better)
Translates to: MEKCPRPSATMLVRPRTCHFLLV*LRGLRC
Trigger: ACATCTTAGACCCCTGAGCAACACAAGGAGAAAATG...ACAAGTCCGGGGCCTCACCAGCATCGTGGCAGAAGGCCTGGGGCATTTCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAGGGCTGGGTGGCTGTCACCCTCAATAGGTGCCATCAGTGTTTGGTGCCCGCCTTCTTAATGATGCTTTaGGAGAAGATGAGGGACGTG +
Preference number: 5 (lower is better)
Translates to: EGWVAVTLNRCHQCLVPAFLMML*EKMRDV
Trigger: CACGTCCCTCATCTTCTCCAAAAGCATCATTAAGAA...GGCGGGCACCAAACACTGATGGCACCTATTGAGGGTGACAGCCACCCAGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000651550.1
CDS-3UTR CAA 90 bp TCAATACCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGAATCCTCAGCCCAACCTaGGAGGCCCAGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SIPRMTFCFGKVAEESPRILSPT*EAQQLG
Trigger: CCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGAT...TCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGGTATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCTGCTAAGCTCCACGAGGACGGGGAGGGTCTGCCCCGAGAGGATGCTCAGAAGGGCAAAGGTTTCCATTaGCAATGTAATCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: PAKLHEDGEGLPREDAQKGKGFH*QCNLHF
Trigger: GAAATGCAGATTACATTGCAAATGGAAACCTTTGCC...CTTCTGAGCATCCTCTCGGGGCAGACCCTCCCCGTCCTCGTGGAGCTTAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS CCA 90 bp CCTCCAGCCCACAGTCCATTTGGCATTTGTTCTCCCCAGCTTTGTTaGAATCATATCCAGCCATGTCTCATCACAGCTGCAACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPAHSPFGICSPQLC*NHIQPCLITAATLA
Trigger: GGCCAGGGTTGCAGCTGTGATGAGACATGGCTGGATATGATTCCAACAAAGCTGGGGAGAACAAATGCCAAATGGACTGTGGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS-3UTR CAA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: GSQAAPGWGTSRSRCTRNKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...ATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377840.6
ENST00000523493.5
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGGAAGCTGGGACTGGTaGGTTGGGTGGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRGSWDW*VGWLLY
Trigger: GTACAGCAGCCACCCAACCAACCAGTCCCAGCTTCC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCCAAGCAGCCCCGGGTaGGGGAACCTCCAGGAGTCG +
Preference number: 5 (lower is better)
Translates to: LTFKVHNVINTSDDILLRPSSPG*GNLQES
Trigger: CGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: GLGLRLFAGQSIGLQRPSLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...ACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGCAGCATCCTCCATCTaGAGGACAGCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKAASSI*RTALSA
Trigger: TGCGCTCAGAGCTGTCCTCAAGATGGAGGATGCTGC...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCATCACCGGAACAGGCTaGCCCAGAATCCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAITGTG*PRIHLL
Trigger: CAGCAAGTGGATTCTGGGCAAGCCTGTTCCGGTGAT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTCATTCAGCCCAGGTTaGGACAAGGGCTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDSFSPG*DKGSTW
Trigger: CCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGA...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCCAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: WGCGYLQDSLLVCRDPVAQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...GGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAACGGCTTGTGTCCTTaGGAGCCATCCTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSNGLCP*EPSSPS
Trigger: GCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEHLLNG*CPLEPS
Trigger: GGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCACATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: GHCHLRRPSPLSSLSFSPHLLNG*CPLEPS
Trigger: GGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATG...TGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCCCGAGAGGATGCTCAGAAGTTCTGGCTGTAGGCTGTTTGTGATCTGGGTGGGTGAGGCCCCGGACTaGTGTTTTCCATTCAGAATT +
Preference number: 5 (lower is better)
Translates to: CPERMLRSSGCRLFVIWVGEAPD*CFPFRI
Trigger: AATTCTGAATGGAAAACACAAGTCCGGGGCCTCACC...CACCCAGATCACAAACAGCCTACAGCCAGAACTTCTGAGCATCCTCTCGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TACACTCCCATGACAGGAGCACAACTCGGTGGAGAGAGAATGGGGCCTGGAGATCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: YTPMTGAQLGGERMGPGDPSGSS*AHGHFS
Trigger: AGAAAAATGTCCATGGGCCAAACTTGACCCACTGGG...ATCTCCAGGCCCCATTCTCTCTCCACCGAGTTGTGCTCCTGTCATGGGAGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGTTTCTACCCCTGCCTaGCTGGACACCCTGAAGCAC +
Preference number: 5 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGVSTPA*LDTLKH
Trigger: GTGCTTCAGGGTGTCCAGCAAGGCAGGGGTAGAAAC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTTCTTAATGATGCTTTaGGAGAAGATGAGGGACGTG +
Preference number: 5 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLFLMML*EKMRDV
Trigger: CACGTCCCTCATCTTCTCCAAAAGCATCATTAAGAA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCAAAATGTATTCATGCTaGAAAAGAAGGGCGCCATTA +
Preference number: 5 (lower is better)
Translates to: CWGTVSWALWLSSGGLGGKMYSC*KRRAPL
Trigger: TAATGGCGCCCTTCTTTTCAAGCATGAATACATTTT...GCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGCTAAAATGTATTCATGCTaGAAAAGAAGGGCGCCATTA +
Preference number: 5 (lower is better)
Translates to: AGGRSHGLSGYLQEGWVAKMYSC*KRRAPL
Trigger: TAATGGCGCCCTTCTTTTCAAGCATGAATACATTTT...AGCCACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATGAGGGACGTGGCCACAGGCATGGTGATTTTGGGGACAAGGGCGACCAGCGGCTTGGCTATTGATTGGTaGGAATGTTCAACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: MRDVATGMVILGTRATSGLAIDW*ECSTLH
Trigger: ATGGAGAGTTGAACATTCCAACCAATCAATAGCCAA...GCCGCTGGTCGCCCTTGTCCCCAAAATCACCATGCCTGTGGCCACGTCCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTATCCTCAGCCCAACCTaGGAGGCCCAGCAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCILSPT*EAQQLG
Trigger: CCCCAGCTGCTGGGCCTCCAAGGTTGGGCTGAGGAT...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATCTGTGTTTCCAGGGGCTGTGGACACCCTGGTGGCCCTGGCTTGGGCACTCCACTACGCCAATCTTATaGCATGTTTCTCCAACTAAT +
Preference number: 5 (lower is better)
Translates to: DLCFQGLWTPWWPWLGHSTTPIL*HVSPTN
Trigger: ATTAGTTGGAGAAACATGCAATAAGATTGGCGTAGT...GGAGTGCCCAAGCCAGGGCCACCAGGGTGTCCACAGCCCCTGGAAACACAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGATTGATTTTTCAGGACTaGATGGAATGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGLIFQD*MEWTGK
Trigger: TTTCCCTGTCCATTCCATCAAGTCCTGAAAAATCAA...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGTTGATTTTTCAGGACTaGATGGAATGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLLIFQD*MEWTGK
Trigger: TTTCCCTGTCCATTCCATCAAGTCCTGAAAAATCAA...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
CDS-3UTR CAA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTGGGTGTGGCGACCTTaGGTTTGGATCCTCCAATTA +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPEWVWRP*VWILQL
Trigger: TAATTGGAGGATCCAAACCAAAGGTCGCCACACCCA...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LFAGQSIGLQRPSGHREKVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...CTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGATACCTTCGTCTCTCTaGCGCTTGTTGGTGTCGGCG +
Preference number: 5 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKIPSSL*RLLVSA
Trigger: CGCCGACACCAACAAGCGCAAGAGAGACGAAGGTAT...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAGGGCTGGGTGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: DAGGRSHGLSGYLQEGWVGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...CACCCAGCCCTCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPELQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCAGCATCCTCCATCTaGAGGACAGCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRAASSI*RTALSA
Trigger: TGCGCTCAGAGCTGTCCTCAAGATGGAGGATGCTGC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AACGGCTTGTGTCCTTTGGAGCCATCCTCACCAAGCTCCCAGGCAGCTCCGCTGCCCAGACAGTTTTCTTaGAGTTCTTTGATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: NGLCPLEPSSPSSQAAPLPRQFS*SSLIWK
Trigger: TTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGG...CAGCGGAGCTGCCTGGGAGCTTGGTGAGGATGGCTCCAAAGGACACAAGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATACAGGTGGGCATGCATaGTGCGAAATTAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHTGGHA*CEIRHL
Trigger: CAGATGCCTAATTTCGCACAATGCATGCCCACCTGT...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCAAGAGGTGCAGGGTTTaGTCTGAGGTCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: WLLEIDKHPEVQRPHQRAKRCRV*SEVPQQ
Trigger: TTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTT...GGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTTTGGTCCAAATATTATaGGGCCTCAGGTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSLVQIL*GLRCPP
Trigger: GGGTGGGCACCTGAGGCCCAATAATATTTGGACCAA...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAACCCCTCCGAGTGTTCTaGTTTCCCACTTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQPLRVF*FPTWSK
Trigger: TTTGGACCAAGTGGGAAACAAGAACACTCGGAGGGG...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTCTTGAGGACTCCACCTaGCTGAGCCTTAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGLEDST*LSLSFL
Trigger: GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAG...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTAACATACCTTCTCCTACCTTACCTGACAGGTGGAAGCTGCAGCCAGCTCACCTTGAGGACTCCACCTaGCTGAGCCTTAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GNIPSPTLPDRWKLQPAHLEDST*LSLSFL
Trigger: GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAG...GTGAGCTGGCTGCAGCTTCCACCTGTCAGGTAAGGTAGGAGAAGGTATGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTGCATCCATGTGCGCTaGTGCTTCCGCCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFCIHVR*CFRLAA
Trigger: GGCTGCCAGGCGGAAGCACAAGCGCACATGGATGCA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTGGTGAGGCCCCGGACTaGTGTTTTCCATTCAGAATT +
Preference number: 5 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGGEAPD*CFPFRI
Trigger: AATTCTGAATGGAAAACACAAGTCCGGGGCCTCACC...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAGCACTGTTGTGGATTaGGTCAAAGACTCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSSTVVD*VKDSAG
Trigger: ACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCT...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCCCTGGTGGCCCTGGCTaGGGCACTCCTGCATACTGT +
Preference number: 5 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFPGGPG*GTPAYC
Trigger: ACAGTATGCAGGAGTGCCCAAGCCAGGGCCACCAGG...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGPSGSS*AHGHFS
Trigger: AGAAAAATGTCCATGGGCCAAACTTGACCCACTGGG...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS TCA 90 bp TTGGCATCCACCATGCACCATCCAGCTTACGCCACCTACCCTTCTTaGCTCAGATTCTGCCTGCCAACATCAATCTGCAAGGAATCCCAT +
Preference number: 5 (lower is better)
Translates to: LASTMHHPAYATYPS*LRFCLPTSICKESH
Trigger: ATGGGATTCCTTGCAGATTGATGTTGGCAGGCAGAATCTGAGTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTCTAGGCACGGTGTCATaGTCACACACCCGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCLGTVS*SHTRSA
Trigger: GGCAGAGCGGGTGTGTGACAATGACACCGTGCCTAG...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGTCTCTCTTGCGCTTGTaGGTGTCGGCGCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LTFKVHNVINTSDDILLRSLLRL*VSALGD
Trigger: GTCCCCCAGCGCCGACACCAACAAGCGCAAGAGAGA...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGAGCCAAGCAGCCCCGGGTTGGGGAACCTCCAGGAGTCGTTGTACGAGGAATAGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: GAKQPRVGEPPGVVVRGIGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...TATTCCTCGTACAACGACTCCTGGAGGTTCCCCAACCCGGGGCTGCTTGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377840.6
CDS-3UTR CAA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: ICRTVYWFAETQWPSGEAWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCLPRIH*LGSWRV
Trigger: CACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAA...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCTTGCCCAGAATCCACTaGCTGGGGTCCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: KSSVLIIVYITGTGLPRILPRIH*LGSWRV
Trigger: CACCCTCCAGGACCCCAGCAAGTGGATTCTGGGCAA...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTACAGGTGGGCATGCATaGTGCGAAATTAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: ICRTVYWFAETQWPSGEATGGHA*CEIRHL
Trigger: CAGATGCCTAATTTCGCACAATGCATGCCCACCTGT...AGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTTCATTCAGCCCAGGTTaGGACAAGGGCTCTACCTGG +
Preference number: 5 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFSFSPG*DKGSTW
Trigger: CCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGA...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTCAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCCAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGCCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACC +
Preference number: 5 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVPGVKW*SHKYKT
Trigger: GGTTTTGTATTTGTGAGACAACCACTTGACTCCTGG...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKHLLNG*CPLEPS
Trigger: GGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTAGCACTGTTGTGGATTaGGTCAAAGACTCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLASTVVD*VKDSAG
Trigger: ACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCT...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAAGTGGGGGATGCTGGGGGACGGTCTCATGGGCTCTCTGGCTATCTTCAGGAACTACGCCAATCTTATaGCATGTTTCTCCAACTAAT +
Preference number: 5 (lower is better)
Translates to: ASGGCWGTVSWALWLSSGTTPIL*HVSPTN
Trigger: ATTAGTTGGAGAAACATGCAATAAGATTGGCGTAGT...TCCTGAAGATAGCCAGAGAGCCCATGAGACCGTCCCCCAGCATCCCCCACTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTGCAGGGCCTGACACCTaGATGAGCAAGTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRAGPDT*MSKFHY
Trigger: ATAGTGGAACTTGCTCATCAAGGTGTCAGGCCCTGC...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAATTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: VICRTVYWFAETQWPSGELQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAATTGCAGGACAGTCTATaGGTTTGCAGAGACCCAGTG +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKLQDSL*VCRDPV
Trigger: CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGGCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCCCCAGACAGTTTTCTTaGAGTTCTTTGATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: TGRLGWGCGYLQDSLLVCPRQFS*SSLIWK
Trigger: TTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGG...GCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGACAGGTGGGCATGCATaGTGCGAAATTAGGCATCTG +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLTGGHA*CEIRHL
Trigger: CAGATGCCTAATTTCGCACAATGCATGCCCACCTGT...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCAGATATGGGGGACATaGTCACCTAAGAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKQIWGT*SPKKAK
Trigger: CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCAAGAGGTGCAGGGTTTaGTCTGAGGTCCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCKRCRV*SEVPQQ
Trigger: TTGCTGTGGGACCTCAGACAAAACCCTGCACCTCTT...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 5 (lower is better)
Translates to: GWGCGYLQDSLLVCRDPVVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...CACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGACGAGGTGCTGTGAATaGGTGAGAGCGGGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: PALTFKVHNVINTSDDILTRCCE*VRAGVC
Trigger: ACACACGCCCGCTCTCACCAATTCACAGCACCTCGT...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGCTTGGGAAAGGGATGTaGGGTTTGATATATCATCCA +
Preference number: 5 (lower is better)
Translates to: GGACSTTSPVRLLVKILKLGKGM*GLIYHP
Trigger: TGGATGATATATCAAACCCAACATCCCTTTCCCAAG...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGPSGSS*AHGHFS
Trigger: AGAAAAATGTCCATGGGCCAAACTTGACCCACTGGG...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTCCCAGTGGGTCAAGTTaGGCCCATGGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLPSGSS*AHGHFS
Trigger: AGAAAAATGTCCATGGGCCAAACTTGACCCACTGGG...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCCATTTTCTCCTTGTGTaGCTCAGGGGTCTAAGATGT +
Preference number: 5 (lower is better)
Translates to: AFRNRQASRSPTAPPKGPHFLLV*LRGLRC
Trigger: ACATCTTAGACCCCTGAGCAACACAAGGAGAAAATG...GGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGTTGGCTATTGATTGGTaGGAATGTTCAACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAELAIDW*ECSTLH
Trigger: ATGGAGAGTTGAACATTCCAACCAATCAATAGCCAA...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGTCCGGCAAAGGTTTCCATTaGCAATGTAATCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: EIDKHPEVQRPHQRAPESGKGFH*QCNLHF
Trigger: GAAATGCAGATTACATTGCAAATGGAAACCTTTGCC...GGACTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCACAGGCATCACAAACTTaGGCGGATACAGTAGATATG +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSQASQT*ADTVDM
Trigger: CATATCTACTGTATCCGCCAAAGTTTGTGATGCCTG...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACTGTTGTGGATTTGGTCAAAGACTCCGCAGGTTTCAATGTTCTTAGGAAACAAACTCCCTGCTCGGGCTaGATGGGCTCTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TVVDLVKDSAGFNVLRKQTPCSG*MGSVVV
Trigger: CACCACCACAGAGCCCATCAAGCCCGAGCAGGGAGT...TTGTTTCCTAAGAACATTGAAACCTGCGGAGTCTTTGACCAAATCCACAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523241.6
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATTGATTTTTCAGGACTaGATGGAATGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPLIFQD*MEWTGK
Trigger: TTTCCCTGTCCATTCCATCAAGTCCTGAAAAATCAA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CAA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATAGTGGCGACCTTTGGTTaGGATCCTCCAATTACCCCA +
Preference number: 5 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIVATFG*DPPITP
Trigger: TGGGGTAATTGGAGGATCCAAACCAAAGGTCGCCAC...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTGTCCGGATGATCCTGTaGATGGAACTGACGCTAGGC +
Preference number: 5 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCVRMIL*MELTLG
Trigger: GCCTAGCGTCAGTTCCATCAACAGGATCATCCGGAC...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAACCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: VICRTVYWFAETQWPSGEPGCSD*TRETMQ
Trigger: TTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGG...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCTTGAGGACTCCACCTaGCTGAGCCTTAGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRLEDST*LSLSFL
Trigger: GAGAAAACTAAGGCTCAGCAAGGTGGAGTCCTCAAG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCCCCAGAGCTTGGGAAAGGGATGTaGGGTTTGATATATCATCCA +
Preference number: 5 (lower is better)
Translates to: LEIDKHPEVQRPHQRAPELGKGM*GLIYHP
Trigger: TGGATGATATATCAAACCCAACATCCCTTTCCCAAG...CTCTGGGGCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTAGGGAACAAAATACTTAGCGGTGGCCAGAGGAAGTCTGCTTTTTCTCCCTGCAGCACTGTTGTGGATTaGGTCAAAGACTCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: LGNKILSGGQRKSAFSPCSTVVD*VKDSAG
Trigger: ACCTGCGGAGTCTTTGACCAAATCCACAACAGTGCT...GCAGGGAGAAAAAGCAGACTTCCTCTGGCCACCGCTAAGTATTTTGTTCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCATTTTCTCCTTGTGTaGCTCAGGGGTCTAAGATGT +
Preference number: 5 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLHFLLV*LRGLRC
Trigger: ACATCTTAGACCCCTGAGCAACACAAGGAGAAAATG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCAGGCTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGAAAATGTATTCATGCTaGAAAAGAAGGGCGCCATTA +
Preference number: 5 (lower is better)
Translates to: AGWAGAAVICRTVYWFAEKMYSC*KRRAPL
Trigger: TAATGGCGCCCTTCTTTTCAAGCATGAATACATTTT...CTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AAGTCCTCTGTGTTAATTATTGTCTACATCACCGGAACAGGCTTGCCCAGAATCGACAGCAGGCAAGAATaGGCATGGGGAGACTCAGTG +
Preference number: 5 (lower is better)
Translates to: KSSVLIIVYITGTGLPRIDSRQE*AWGDSV
Trigger: CACTGAGTCTCCCCATGCCAATTCTTGCCTGCTGTC...GATTCTGGGCAAGCCTGTTCCGGTGATGTAGACAATAATTAACACAGAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGGGGAGCCTGCAGCACAACCAGCCCAGTGAGACTCCTCGTAAAGATACTAAAGGGCAAAGGTTTCCATTaGCAATGTAATCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: GGACSTTSPVRLLVKILKGKGFH*QCNLHF
Trigger: GAAATGCAGATTACATTGCAAATGGAAACCTTTGCC...CTTTAGTATCTTTACGAGGAGTCTCACTGGGCTGGTTGTGCTGCAGGCTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCAGGCATCACAAACTTaGGCGGATACAGTAGATATG +
Preference number: 5 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLQASQT*ADTVDM
Trigger: CATATCTACTGTATCCGCCAAAGTTTGTGATGCCTG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATCAACAGGTGGGCATGCATTGTGCGAAATTAGGCATCTGCCCCAGCCCCAGCACTACGCCAATCTTATaGCATGTTTCTCCAACTAAT +
Preference number: 5 (lower is better)
Translates to: DQQVGMHCAKLGICPSPSTTPIL*HVSPTN
Trigger: ATTAGTTGGAGAAACATGCAATAAGATTGGCGTAGT...GCTGGGGCTGGGGCAGATGCCTAATTTCGCACAATGCATGCCCACCTGTTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: CRTVYWFAETQWPSGEAHKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...ATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTGGGCTGGGGCTGCGGTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCATTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LGWGCGYLQDSLLVCRDPFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...TGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAACCGCAGCCCCAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGCCTGGCTGTTCTGACTaGACAAGAGAGACTATGCAA +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRPGCSD*TRETMQ
Trigger: TTGCATAGTCTCTCTTGTCAAGTCAGAACAGCCAGG...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTTTTTCCAGGCTCTTCTGATTCCCGCCCCTCCGAGTGTTCTTGTTTCCCACTTCTTGGGAAAGGGATGTaGGGTTTGATATATCATCCA +
Preference number: 5 (lower is better)
Translates to: LFPGSSDSRPSECSCFPLLGKGM*GLIYHP
Trigger: TGGATGATATATCAAACCCAACATCCCTTTCCCAAG...AAGTGGGAAACAAGAACACTCGGAGGGGCGGGAATCAGAAGAGCCTGGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGTTGGCTATTGATTGGTaGGAATGTTCAACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQLAIDW*ECSTLH
Trigger: ATGGAGAGTTGAACATTCCAACCAATCAATAGCCAA...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTGATTTTTCAGGACTaGATGGAATGGACAGGGAAA +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLALIFQD*MEWTGK
Trigger: TTTCCCTGTCCATTCCATCAAGTCCTGAAAAATCAA...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000520154.6
ENST00000523241.6
CDS-3UTR CAA 90 bp TCTCATCACTGTCATTCAGCCCAGGTTTGGACAAGGGCTCTACCTGGCTGTTCTAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: SHHCHSAQVWTRALPGCSKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...AGAACAGCCAGGTAGAGCCCTTGTCCAAACCTGGGCTGAATGACAGTGATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: GQSIGLQRPSGHREKLIDKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...ATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: YLQDSLLVCRDPVAIGRSKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...GCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: LQDSLLVCRDPVAIGRSSGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...TGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp AGCAAGCTCTCCTTCCCAGGCTGGGGTGGTTATGATGGATGGATAGTCAGACAGGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: SKLSFPGWGGYDGWIVRQGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...CTGTCTGACTATCCATCCATCATAACCACCCCAGCCTGGGAAGGAGAGCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGTAGGCTGTTTGTGATCTGGGTGTGGGGGAAAGTCCTCTGTGTTAATTATTGTTGGGGCTGCGGTTATTaGCAGGACAGTCTATTGGTT +
Preference number: 5 (lower is better)
Translates to: CRLFVIWVWGKVLCVNYCWGCGY*QDSLLV
Trigger: AACCAATAGACTGTCCTGCAAATAACCGCAGCCCCA...ACAATAATTAACACAGAGGACTTTCCCCCACACCCAGATCACAAACAGCCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGCGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 5 (lower is better)
Translates to: LAFRNRQASRSPTAPPKGVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...GCCCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 5 (lower is better)
Translates to: GLQRPSGHREKLIDWLLEVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...TTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCTCGGATGACATTCTGCTTCGGAAAAGTAGCTGAGGAATCTCCCAGACAGTTTCCAGGAGTCAAGTGGTaGTCTCACAAATACAAAACC +
Preference number: 5 (lower is better)
Translates to: PRMTFCFGKVAEESPRQFPGVKW*SHKYKT
Trigger: GGTTTTGTATTTGTGAGACAACCACTTGACTCCTGG...AAACTGTCTGGGAGATTCCTCAGCTACTTTTCCGAAGCAGAATGTCATCCGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCATCTACTCAACGGCTaGTGTCCTTTGGAGCCATCC +
Preference number: 5 (lower is better)
Translates to: LTFKVHNVINTSDDILLRHLLNG*CPLEPS
Trigger: GGATGGCTCCAAAGGACACAAGCCGTTGAGTAGATG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGCCATCCTGGTGACATACAGATATGGGGGACATTGTCACCTAAGAAGGCCAAGCTTGGGAAAGGGATGTaGGGTTTGATATATCATCCA +
Preference number: 5 (lower is better)
Translates to: CHPGDIQIWGTLSPKKAKLGKGM*GLIYHP
Trigger: TGGATGATATATCAAACCCAACATCCCTTTCCCAAG...CTTGGCCTTCTTAGGTGACAATGTCCCCCATATCTGTATGTCACCAGGATGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGTGTCAGGGTGCTTGGTaGGTTTTTAAGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: TVYWFAETQWPSGEAHRLCQGAW*VFKICF
Trigger: GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACA...CAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTTATTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAATTCTTAATGATGCTTTaGGAGAAGATGAGGGACGTG +
Preference number: 5 (lower is better)
Translates to: VICRTVYWFAETQWPSGEFLMML*EKMRDV
Trigger: CACGTCCCTCATCTTCTCCAAAAGCATCATTAAGAA...TTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTTGCAGGACAGTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCAAAATGTATTCATGCTaGAAAAGAAGGGCGCCATTA +
Preference number: 5 (lower is better)
Translates to: FAGQSIGLQRPSGHREKLKMYSC*KRRAPL
Trigger: TAATGGCGCCCTTCTTTTCAAGCATGAATACATTTT...GAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGACTGTCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CATTGTCACCTAAGAAGGCCAAGCCCCCTCTCATCACTGTCATTCAGCCCAGGTACTACGCCAATCTTATaGCATGTTTCTCCAACTAAT +
Preference number: 5 (lower is better)
Translates to: HCHLRRPSPLSSLSFSPGTTPIL*HVSPTN
Trigger: ATTAGTTGGAGAAACATGCAATAAGATTGGCGTAGT...ACCTGGGCTGAATGACAGTGATGAGAGGGGGCTTGGCCTTCTTAGGTGACAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GTCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTGGAGAAGCTCATAGATaGGCTTTTAGAAATAGACAA +
Preference number: 5 (lower is better)
Translates to: VYWFAETQWPSGEAHRLAGEAHR*AFRNRQ
Trigger: TTGTCTATTTCTAAAAGCCAATCTATGAGCTTCTCC...AGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377852.7
ENST00000377853.6
ENST00000520154.6
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GCCTGGAACCACAAGGAGGGCAGGATCCAAAGATGTGGGTACACATCATTCCAATTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AWNHKEGRIQRCGYTSFQFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...TTGGAATGATGTGTACCCACATCTTTGGATCCTGCCCTCCTTGTGGTTCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAACCCAGACAGTTTTCTTaGAGTTCTTTGATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKPRQFS*SSLIWK
Trigger: TTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGG...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp GATTGGCTTTTAGAAATAGACAAGCATCCAGAAGTCCAACGGCCCCACCAAAGGGTTCTTGTTTCCCACTaGGTCCAAATATTATTGGGC +
Preference number: 5 (lower is better)
Translates to: DWLLEIDKHPEVQRPHQRVLVSH*VQILLG
Trigger: GCCCAATAATATTTGGACCAAGTGGGAAACAAGAAC...CCTTTGGTGGGGCCGTTGGACTTCTGGATGCTTGTCTATTTCTAAAAGCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTAGAAATACATTTTCTCCTTGTGTaGCTCAGGGGTCTAAGATGT +
Preference number: 5 (lower is better)
Translates to: LQRPSGHREKLIDWLLEIHFLLV*LRGLRC
Trigger: ACATCTTAGACCCCTGAGCAACACAAGGAGAAAATG...TATTTCTAAAAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TTGTGCTTCCGCCTGGCAGCCCAGGAGTCAAGTGGTTGTCTCACAAATACAAAAGGCAAAGGTTTCCATTaGCAATGTAATCTGCATTTC +
Preference number: 5 (lower is better)
Translates to: LCFRLAAQESSGCLTNTKGKGFH*QCNLHF
Trigger: GAAATGCAGATTACATTGCAAATGGAAACCTTTGCC...TTTTGTATTTGTGAGACAACCACTTGACTCCTGGGCTGCCAGGCGGAAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTATTGGTTTGCAGAGACCCAGTGGCCATCGGGAGAAGCTCATAGATTGGCTTTTTTCTTTGAGTTCTTaGATCTGGAAAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SIGLQRPSGHREKLIDWLFSLSS*IWKRAA
Trigger: AGCAGCTCTTTTCCAGATCAAAGAACTCAAAGAAAA...AAGCCAATCTATGAGCTTCTCCCGATGGCCACTGGGTCTCTGCAAACCAATAGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TCTACAAATACTCAATGTCCAAGGCCACTAGAGGGTGAAAAACCAGGGCAGCGTCCCAGACAGTTTTCTTaGAGTTCTTTGATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: STNTQCPRPLEGEKPGQRPRQFS*SSLIWK
Trigger: TTTCCAGATCAAAGAACTCAAAGAAAACTGTCTGGG...ACGCTGCCCTGGTTTTTCACCCTCTAGTGGCCTTGGACATTGAGTATTTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp ATCGTGTTTCTAGGGCTGTGTCAGGGTGCTTGGTTGGTTTTTAAGATTTGCTTCTGTCAGGGTGCTTGGTaGGTTTTTAAGATTTGCTTC +
Preference number: 5 (lower is better)
Translates to: IVFLGLCQGAWLVFKICFCQGAW*VFKICF
Trigger: GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACA...GAAGCAAATCTTAAAAACCAACCAAGCACCCTGACACAGCCCTAGAAACACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGCTTCGGCAGGCATCACAAACTTaGGCGGATACAGTAGATATG +
Preference number: 5 (lower is better)
Translates to: LTFKVHNVINTSDDILLRQASQT*ADTVDM
Trigger: CATATCTACTGTATCCGCCAAAGTTTGTGATGCCTG...CCGAAGCAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp TGGGAAAGAGTCTGGATGAAACCTCAGAAGCACTGTTGTGGATTTGGTCAAAGAAAACATGGTGGGATTTaGGCGTTTATATTCAGCGAT +
Preference number: 5 (lower is better)
Translates to: WERVWMKPQKHCCGFGQRKHGGI*AFIFSD
Trigger: ATCGCTGAATATAAACGCCAAAATCCCACCATGTTT...TCTTTGACCAAATCCACAACAGTGCTTCTGAGGTTTCATCCAGACTCTTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS-3UTR CAA 90 bp CCAGCCCTCACATTCAAAGTCCACAATGTAATCAATACCTCGGATGACATTCTGTTGGCTATTGATTGGTaGGAATGTTCAACTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PALTFKVHNVINTSDDILLAIDW*ECSTLH
Trigger: ATGGAGAGTTGAACATTCCAACCAATCAATAGCCAA...CAGAATGTCATCCGAGGTATTGATTACATTGTGGACTTTGAATGTGAGGGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
ENST00000651550.1
CDS CAA 90 bp CCTGGCACACTGCTCCCGATGTCAGCAGGGGTGGGGCTGGCCAGATaGGCCTTCATGTCGTCCAGCCCACCAGCCAGCGAGGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: PGTLLPMSAGVGLAR*AFMSSSPPASEAMA
Trigger: AGCCATGGCCTCGCTGGCTGGTGGGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCGGGAGCAGTGTGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520083.1
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000524340.5
ENST00000651550.1
CDS CCA 72 bp CTGGCACACTGCTCCCGATGTCAGCAGGGGTGGGGCTaGCCAGATTGGCCTTCATGTCGTCCAGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: LAHCSRCQQGWG*PDWPSCRPAHQ
Trigger: CTGGTGGGCTGGACGACATGAAGGCCAATCTGGCCAGCCCCACCCCTGCTGACATCGGGAGCAGTGTGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358127.9
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520083.1
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000524340.5
ENST00000651550.1
CDS CAA 72 bp GCGCTCATCTCACAGGAGGCTGTGGTAATGGGTGAATaGGCAGGATCCCTGCGGGCCAGGCAGCCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: ALISQEAVVMGE*AGSLRARQPGR
Trigger: CCGGCCTGGCTGCCTGGCCCGCAGGGATCCTGCCAATTCACCCATTACCACAGCCTCCTGTGAGATGAGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS CAA 90 bp GTGAGAGGAGCGCTCATCTCACAGGAGGCTGTGGTAATGGGTGAATaGGCAGGATCCCTGCGGGCCAGGCAGCCAGGCCGGCCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: VRGALISQEAVVMGE*AGSLRARQPGRPCP
Trigger: AGGGCAAGGCCGGCCTGGCTGCCTGGCCCGCAGGGATCCTGCCAATTCACCCATTACCACAGCCTCCTGTGAGATGAGCGCTCCTCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS GCA 72 bp ACAAGTCTCCCCGCATCTGCTTCCGGAGGAAGTCTCTaGCCGGAAGCGAGTGGCCGTTCGGCACCGGAGACT +
Preference number: 6 (lower is better)
Translates to: TSLPASASGGSL*PEASGRSAPET
Trigger: AGTCTCCGGTGCCGAACGGCCACTCGCTTCCGGGCAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520154.6
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000523241.6
ENST00000523493.5
ENST00000524340.5
ENST00000651550.1
CDS TCA 72 bp AGGAGCGCTCATCTCACAGGAGGCTGTGGTAATGGGTaGATTGGCAGGATCCCTGCGGGCCAGGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: RSAHLTGGCGNG*IGRIPAGQAAR
Trigger: CCTGGCTGCCTGGCCCGCAGGGATCCTGCCAATTCACCCATTACCACAGCCTCCTGTGAGATGAGCGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651550.1
CDS GCA 72 bp TCCAGCTGCTGCTGTGTGAACAAGTCTCCCCGCATCTaGTTCCGGAGGAAGTCTCTGCCCGGAAGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: SSCCCVNKSPRI*FRRKSLPGSEW
Trigger: CCACTCGCTTCCGGGCAGAGACTTCCTCCGGAAGCAGATGCGGGGAGACTTGTTCACACAGCAGCAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520154.6
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000523241.6
ENST00000523493.5
ENST00000524340.5
ENST00000651550.1
CDS GCA 72 bp TGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTGCTaGTGTGTGAACAAGTCTCCCCGCATCTGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: CLSNTRSSTSSC*CVNKSPRICFR
Trigger: CCGGAAGCAGATGCGGGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520154.6
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000523241.6
ENST00000523493.5
ENST00000524340.5
ENST00000651550.1
CDS GCA 72 bp GACGAGCCGGCCGAATCCGTGCTCACCGAGGACACCTaGGTCACGGAGCCAGTGGACACTGCCAAGAATTTT +
Preference number: 6 (lower is better)
Translates to: DEPAESVLTEDT*VTEPVDTAKNF
Trigger: AAAATTCTTGGCAGTGTCCACTGGCTCCGTGACGCAGGTGTCCTCGGTGAGCACGGATTCGGCCGGCTCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651199.1
CDS CCA 72 bp CGTGCTCGCCAAGTCACGGCCTGGAAAAGGACTGCCTaGGGCTGCACCAAGTATTGTCTCATCAGCACGGGG +
Preference number: 6 (lower is better)
Translates to: RARQVTAWKRTA*GCTKYCLISTG
Trigger: CCCCGTGCTGATGAGACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGGCCGTGACTTGGCGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523493.5
CDS CCA 72 bp GCCCACCAGCCAGCGAGGCCATGGCTGAATACTCTGTaGTCTGGAAAAGGACTGCCTGGGGCTGCACCAAGT +
Preference number: 6 (lower is better)
Translates to: AHQPARPWLNTL*SGKGLPGAAPS
Trigger: ACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTGGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS GCA 72 bp TGCTGCCTCTCAAACACGCGGTCCAGCACCTCCAGCTaGTGCTGTGTGAACAAGTCTCCCCGCATCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CCLSNTRSSTSS*CCVNKSPRICF
Trigger: GAAGCAGATGCGGGGAGACTTGTTCACACAGCAGCAGCTGGAGGTGCTGGACCGCGTGTTTGAGAGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000358127.9
ENST00000377840.6
ENST00000377847.6
ENST00000377852.7
ENST00000377853.6
ENST00000414447.5
ENST00000446742.5
ENST00000520154.6
ENST00000520281.5
ENST00000522003.5
ENST00000523145.5
ENST00000523241.6
ENST00000523493.5
ENST00000524340.5
ENST00000651550.1
CDS GCA 72 bp GGGTCGTGCTCGCCAAGTCACGGCCTGGAAAAGGACTaGCTGGGGCTGCACCAAGTATTGTCTCATCAGCAC +
Preference number: 6 (lower is better)
Translates to: GSCSPSHGLEKD*LGLHQVLSHQH
Trigger: GTGCTGATGAGACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGGCCGTGACTTGGCGAGCACGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523493.5
CDS CCA 72 bp AGAGTCTGGCCCTGGGACTTCCAGAGGGAAGCTGCTTaGCATCCACCATGCACCATCCAGCTTACGCCACCT +
Preference number: 6 (lower is better)
Translates to: RVWPWDFQREAA*HPPCTIQLTPP
Trigger: AGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 72 bp AAGAGTCTGGCCCTGGGACTTCCAGAGGGAAGCTGCTaGGCATCCACCATGCACCATCCAGCTTACGCCACC +
Preference number: 6 (lower is better)
Translates to: KSLALGLPEGSC*ASTMHHPAYAT
Trigger: GGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGACTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS GCA 72 bp CTAAAGAGTCTGGCCCTGGGACTTCCAGAGGGAAGCTaGTTGGCATCCACCATGCACCATCCAGCTTACGCC +
Preference number: 6 (lower is better)
Translates to: LKSLALGLPEGS*LASTMHHPAYA
Trigger: GGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGACTCTTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 90 bp AGACAGCTAAAGAGTCTGGCCCTGGGACTTCCAGAGGGAAGCTGCTaGGCATCCACCATGCACCATCCAGCTTACGCCACCTACCCTTCT +
Preference number: 6 (lower is better)
Translates to: RQLKSLALGLPEGSC*ASTMHHPAYATYPS
Trigger: AGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCAGGGCCAGACTCTTTAGCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS GCA 72 bp TGGGACTTCCAGAGGGAAGCTGCTTGGCATCCACCATaGACCATCCAGCTTACGCCACCTACCCTTCTTGAC +
Preference number: 6 (lower is better)
Translates to: WDFQREAAWHPP*TIQLTPPTLLD
Trigger: GTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAGCAGCTTCCCTCTGGAAGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS GCA 72 bp TGCACCAAGTATTGTCTCATCAGCACGGGGCACCACTaGTCGGGCTTGATGGGCTCTGTGGTGGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: CTKYCLISTGHH*SGLMGSVVVKM
Trigger: CATCTTCACCACCACAGAGCCCATCAAGCCCGAGCAGTGGTGCCCCGTGCTGATGAGACAATACTTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523493.5
ENST00000524340.5
CDS CCA 72 bp CCAGCCAGCGAGGCCATGGCTGAATACTCTGTGGTCTaGAAAAGGACTGCCTGGGGCTGCACCAAGTATTGT +
Preference number: 6 (lower is better)
Translates to: PASEAMAEYSVV*KRTAWGCTKYC
Trigger: ACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCATGGCCTCGCTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS CCA 72 bp ATGGCTGAATACTCTGTGGTCTGGAAAAGGACTGCCTaGGGCTGCACCAAGTATTGTCTCATCAGCACGGGG +
Preference number: 6 (lower is better)
Translates to: MAEYSVVWKRTA*GCTKYCLISTG
Trigger: CCCCGTGCTGATGAGACAATACTTGGTGCAGCCCCAGGCAGTCCTTTTCCAGACCACAGAGTATTCAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524340.5
CDS CAA 72 bp CTGCCAACATCAATCTGCAAGGAATCCCATTCCTCCTaGAGGTTGGTGCCCACCAGGGTGGCCTTTCTCATG +
Preference number: 6 (lower is better)
Translates to: LPTSICKESHSS*RLVPTRVAFLM
Trigger: CATGAGAAAGGCCACCCTGGTGGGCACCAACCTCAAGGAGGAATGGGATTCCTTGCAGATTGATGTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 90 bp CCCTCCAGCCCACAGTCCATTTGGCATTTGTTCTCCCCAGCTTTGTaGGAATCATATCCAGCCATGTCTCATCACAGCTGCAACCCTGGC +
Preference number: 6 (lower is better)
Translates to: PSSPQSIWHLFSPAL*ESYPAMSHHSCNPG
Trigger: GCCAGGGTTGCAGCTGTGATGAGACATGGCTGGATATGATTCCAACAAAGCTGGGGAGAACAAATGCCAAATGGACTGTGGGCTGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 90 bp CTTGGCATCCACCATGCACCATCCAGCTTACGCCACCTACCCTTCTaGACTCAGATTCTGCCTGCCAACATCAATCTGCAAGGAATCCCA +
Preference number: 6 (lower is better)
Translates to: LGIHHAPSSLRHLPF*TQILPANINLQGIP
Trigger: TGGGATTCCTTGCAGATTGATGTTGGCAGGCAGAATCTGAGTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTGGATGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS TCA 72 bp ACCATGCACCATCCAGCTTACGCCACCTACCCTTCTTaGCTCAGATTCTGCCTGCCAACATCAATCTGCAAG +
Preference number: 6 (lower is better)
Translates to: TMHHPAYATYPS*LRFCLPTSICK
Trigger: CTTGCAGATTGATGTTGGCAGGCAGAATCTGAGTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 72 bp CACCATGCACCATCCAGCTTACGCCACCTACCCTTCTaGACTCAGATTCTGCCTGCCAACATCAATCTGCAA +
Preference number: 6 (lower is better)
Translates to: HHAPSSLRHLPF*TQILPANINLQ
Trigger: TTGCAGATTGATGTTGGCAGGCAGAATCTGAGTCAAGAAGGGTAGGTGGCGTAAGCTGGATGGTGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 90 bp TGCCTGCCAACATCAATCTGCAAGGAATCCCATTCCTCCTTGAGGTaGGTGCCCACCAGGGTGGCCTTTCTCATGAAAGAAATAAACCCT +
Preference number: 6 (lower is better)
Translates to: CLPTSICKESHSSLR*VPTRVAFLMKEINP
Trigger: AGGGTTTATTTCTTTCATGAGAAAGGCCACCCTGGTGGGCACCAACCTCAAGGAGGAATGGGATTCCTTGCAGATTGATGTTGGCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS TCA 72 bp CTGTGCAGCTTAAAGCCACAGCCCAGAACGCATACATaGCTCACCCAAGTCTGCACAGCTAGTAAATGGCAT +
Preference number: 6 (lower is better)
Translates to: LCSLKPQPRTHT*LTQVCTASKWH
Trigger: ATGCCATTTACTAGCTGTGCAGACTTGGGTGAGTCATGTATGCGTTCTGGGCTGTGGCTTTAAGCTGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS GCA 72 bp TGCACAGCTAGTAAATGGCATGATCAGACTCAACAGTaGACCTCCAGGACCCACACTCCCAATCTCTACACA +
Preference number: 6 (lower is better)
Translates to: CTASKWHDQTQQ*TSRTHTPNLYT
Trigger: TGTGTAGAGATTGGGAGTGTGGGTCCTGGAGGTGCACTGTTGAGTCTGATCATGCCATTTACTAGCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1
CDS CAA 90 bp AGATTCTGCCTGCCAACATCAATCTGCAAGGAATCCCATTCCTCCTaGAGGTTGGTGCCCACCAGGGTGGCCTTTCTCATGAAAGAAATA +
Preference number: 6 (lower is better)
Translates to: RFCLPTSICKESHSS*RLVPTRVAFLMKEI
Trigger: TATTTCTTTCATGAGAAAGGCCACCCTGGTGGGCACCAACCTCAAGGAGGAATGGGATTCCTTGCAGATTGATGTTGGCAGGCAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520083.1