RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000075891

Ensembl transcript IDs: ENST00000355243.8, ENST00000361791.7, ENST00000370296.6, ENST00000427256.6, ENST00000428433.5, ENST00000483202.2, ENST00000553492.5, ENST00000554172.2, ENST00000554363.2, ENST00000679374.1

Found 961 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGAGTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCG +
Preference number: 1 (lower is better)
Translates to: ARVRQGGWRASGLAW*RPGRAGPNPPHGAA
Trigger: CGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp CGCGCCCGAGTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCC +
Preference number: 1 (lower is better)
Translates to: RARVRQGGWRASGLA*WRPGRAGPNPPHGA
Trigger: GGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp ATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: IRRAPAGRARVRQGG*RASGLAWWRPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp TGGCTGGCGGGCTTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGG +
Preference number: 1 (lower is better)
Translates to: WLAGFGAGLVEAGTS*AESPSRRRAVQAGG
Trigger: CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp CAGGTCGCGCCCGAGTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACG +
Preference number: 1 (lower is better)
Translates to: QVAPESGRVAGGLRG*LGGGRDELGRIPLT
Trigger: CGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGACCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp AAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGC +
Preference number: 1 (lower is better)
Translates to: KHPARASRSRPSPAG*LAGFGAGLVEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 90 bp CGTCCGAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCG +
Preference number: 1 (lower is better)
Translates to: RPRRVPGAGPRCGPR*LCVTETSGARQQVA
Trigger: CGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTCGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp GCGAAGCCTCCTGGCGCCCGAGCGTCCGAGGCGGGTGCCCGGGGCTaGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATC +
Preference number: 1 (lower is better)
Translates to: AKPPGARASEAGARG*AALRSALIVCHRNI
Trigger: GATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTCGGACGCTCGGGCGCCAGGAGGCTTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 90 bp AGGCCAGCAGGTGGAAGAGACGCTGAGGTAGGGGCAAGGCAGGGCTaGGAGCCGGGTCTCGCAGCAGGAGGTGCCGGGCCCTGGGGAACT +
Preference number: 1 (lower is better)
Translates to: RPAGGRDAEVGARQG*EPGLAAGGAGPWGT
Trigger: AGTTCCCCAGGGCCCGGCACCTCCTGCTGCGAGACCCGGCTCTCAGCCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCTGCTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp AAGCCCGTTCCTAGAGCCGGACCCCCACACCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACT +
Preference number: 1 (lower is better)
Translates to: KPVPRAGPPHPHSIF*DRAHPEGEGSPAGT
Trigger: AGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGGGTGTGGGGGTCCGGCTCTAGGAACGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCGAGTCAGGGA +
Preference number: 1 (lower is better)
Translates to: TAGGRPQSAVYGNWS*GGPGRASDGAASQG
Trigger: TCCCTGACTCGCAGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp AGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGGAGGATGCAGGGCGTCAAGGGACAG +
Preference number: 1 (lower is better)
Translates to: SLWKLVLRRSRESVR*GCESGRRMQGVKGQ
Trigger: CTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp GAGTCAGGGAGGAGGATGCAGGGCGTCAAGGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGAGGCCAGCAGGTGGAAGAGACGCTG +
Preference number: 1 (lower is better)
Translates to: ESGRRMQGVKGQAKD*QEGKLGGQQVEETL
Trigger: CAGCGTCTCTTCCACCTGCTGGCCTCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 90 bp CAAGTAACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCGAGT +
Preference number: 1 (lower is better)
Translates to: QVTAGGRPQSAVYGN*SCGGPGRASDGAAS
Trigger: ACTCGCAGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGTTACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 90 bp TGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATaGAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGA +
Preference number: 1 (lower is better)
Translates to: CFCYFESSRSTGEET*RAHRHYRKSNYGAG
Trigger: TCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 90 bp ATCATATTAAATAAATGTAGACTTTTTGTGGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGAGGGGATGGGAGGAGTGGAGTGGGC +
Preference number: 1 (lower is better)
Translates to: IILNKCRLFVVLFSS*RRRRLGGDGRSGVG
Trigger: GCCCACTCCACTCCTCCCATCCCCTCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAACCACAAAAAGTCTACATTTATTTAATATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 90 bp TTATTGACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTA +
Preference number: 1 (lower is better)
Translates to: LLTLFLLFRVVTIHG*GDMQGASPLPKEQL
Trigger: TAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTCAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CAA 90 bp TCGCGCCCGAGTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGC +
Preference number: 2 (lower is better)
Translates to: SRPSPAGWLAGFGAG*VEAGTSWAESPSRR
Trigger: GCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 2 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ATTERATTGRDGAARPSASGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 2 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCCGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 2 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPARPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PSSGTGHTRKARAVRLALVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 2 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: ASPGAGAATSDLACGDRAAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 2 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRLPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPASSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDRESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 2 (lower is better)
Translates to: ASPGAGAATSDLACGDRAPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 2 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 2 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 2 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PRVRRHAGRIATTERATTVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCATCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 2 (lower is better)
Translates to: ASPGAGAATSDLACGDRAASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 2 (lower is better)
Translates to: PRVRRHAGRIATTERATTSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RARRGERSGRGLQAFSDLSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...CAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 2 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 2 (lower is better)
Translates to: RVRRHAGRIATTERATTGPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 2 (lower is better)
Translates to: AVYGNWSCGGPGRASDGARCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 2 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPARCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: RVRRHAGRIATTERATTGSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 2 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: AVYGNWSCGGPGRASDGALGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: RVRRHAGRIATTERATTGSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 2 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 2 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 2 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: RQRALPPAESRFLLNLLGVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 2 (lower is better)
Translates to: FCYFESSRSTGEETCRAHPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 2 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RKTPVRSLWKLVLRRSRELGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KGSQGREIWARTPSLFGFRESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGCCCTCCCCCAGGACGTaGTGTGCTTTAATGGGCGTG +
Preference number: 2 (lower is better)
Translates to: PRVRRHAGRIATTERATTPSPRT*CALMGV
Trigger: CACGCCCATTAAAGCACAGCACGTCCTGGGGGAGGG...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCATCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 2 (lower is better)
Translates to: LAGERDLGEDSKPFRICSSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 2 (lower is better)
Translates to: RNYRERANKTGQRSPQDHVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 2 (lower is better)
Translates to: FCYFESSRSTGEETCRAHASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 2 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGACTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 2 (lower is better)
Translates to: FCYFESSRSTGEETCRAHPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 2 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: FCYFESSRSTGEETCRAHSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: FCYFESSRSTGEETCRAHYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 2 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 2 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 2 (lower is better)
Translates to: RNYRERANKTGQRSPQDHASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 2 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCATCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: DFVSVISSRHDPRVRRHASSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: IRQRALPPAESRFLLNLLSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 2 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 2 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCACTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 2 (lower is better)
Translates to: LAGERDLGEDSKPFRICSLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: QQNRPEESTGPCSSFCIERESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 2 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 2 (lower is better)
Translates to: FPSQIKRARRGERSGRGLNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVLPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 2 (lower is better)
Translates to: RNYRERANKTGQRSPQDHCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370296.6
3UTR-3UTR GCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: FPSQIKRARRGERSGRGLVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: TKQARGVHRTMFVILHRDRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: KTRNYRERANKTGQRSPQYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 2 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 2 (lower is better)
Translates to: FPSQIKRARRGERSGRGLASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCCCTCCCCCAGGACGTaGTGTGCTTTAATGGGCGTG +
Preference number: 2 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIPSPRT*CALMGV
Trigger: CACGCCCATTAAAGCACAGCACGTCCTGGGGGAGGG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCACGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 2 (lower is better)
Translates to: DFVSVISSRHDPRVRRHARGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR TCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 2 (lower is better)
Translates to: TKQARGVHRTMFVILHRDNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 2 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 2 (lower is better)
Translates to: KTRNYRERANKTGQRSPQPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 2 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp AGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RARRGERSGRGLQAFSDLNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...CAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 2 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTATATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 2 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: KTRNYRERANKTGQRSPQAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: FPSQIKRARRGERSGRGLNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR GCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 2 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCTGGCTTGGTGGAGGCC +
Preference number: 3 (lower is better)
Translates to: ARASRSRPSPAG*LAGFGAGLVEA
Trigger: GGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 72 bp GCACGCCCGCGAGGGGGCGAGCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTGCGGAGACAGGGCGGC +
Preference number: 3 (lower is better)
Translates to: ARPRGGEPGGWS*HLGSSLRRQGG
Trigger: GCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCCCCCTCGCGGGCGTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCTTGGTGGAGGCCGGGA +
Preference number: 3 (lower is better)
Translates to: APAGRARVRQGG*RASGLAWWRPG
Trigger: TCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp CCTGGCGCCCGAGCGTCCGAGGCGGGTGCCCGGGGCTaGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCAC +
Preference number: 3 (lower is better)
Translates to: PGARASEAGARG*AALRSALIVCH
Trigger: GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTCGGACGCTCGGGCGCCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GGCTTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: GFGAGLVEAGTS*AESPSRRRAVQ
Trigger: CTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp CGGCAGGGTGGCTGGCGGGCTTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: RQGGWRASGLAW*RPGRAGPNPPH
Trigger: GTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCT +
Preference number: 3 (lower is better)
Translates to: VRQGGWRASGLA*WRPGRAGPNPP
Trigger: AGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp CCCGAGTCCGGCAGGGTGGCTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATC +
Preference number: 3 (lower is better)
Translates to: PESGRVAGGLRG*LGGGRDELGRI
Trigger: GATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 3 (lower is better)
Translates to: ATTERATTGRDGAARPSAGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 72 bp CGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACATCCGGCGCGCGCCAG +
Preference number: 3 (lower is better)
Translates to: RVPGAGPRCGPR*LCVTETSGARQ
Trigger: CTGGCGCGCGCCGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATGTGGAGGCCGAAGCTG +
Preference number: 3 (lower is better)
Translates to: GIASRRSSLPPG*GQTGTMWRPKL
Trigger: CAGCTTCGGCCTCCACATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp AAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGGAGGATGCAGGGCGTC +
Preference number: 3 (lower is better)
Translates to: KLVLRRSRESVR*GCESGRRMQGV
Trigger: GACGCCCTGCATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 3 (lower is better)
Translates to: RVRRHAGRIATTERATTGGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 72 bp GGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: GRPQSAVYGNWS*GGPGRASDGAA
Trigger: CGCAGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 3 (lower is better)
Translates to: ASPGAGAATSDLACGDRAFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGG +
Preference number: 3 (lower is better)
Translates to: AGGRPQSAVYGN*SCGGPGRASDG
Trigger: CCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp GCCCTCGCCGCCCCGTTCGGGCCACTGGAGCCTGGCTaGGCGCCGGGTTCCCTTAAACGATTCTCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: ALAAPFGPLEPG*APGSLKRFSFL
Trigger: GAGAAAAGAGAATCGTTTAAGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCGAACGGGGCGGCGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 3 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 72 bp AGGGGAAACTGGGAGGCCAGCAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGGCTGAGAGCCGGGTCT +
Preference number: 3 (lower is better)
Translates to: RGNWEASRWKRR*GRGKAGLRAGS
Trigger: AGACCCGGCTCTCAGCCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCTGCTGGCCTCCCAGTTTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp TTGTGGTTCTGTTCAGTTCCTGCCGGAGGAGGAGGCTaGGAGGGGATGGGAGGAGTGGAGTGGGCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: LWFCSVPAGGGG*EGMGGVEWAAP
Trigger: GGGGGCTGCCCACTCCACTCCTCCCATCCCCTCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAACCACAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 3 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR CCA 72 bp AGTAACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTC +
Preference number: 3 (lower is better)
Translates to: SNCWRKTPVRSL*KLVLRRSRESV
Trigger: GACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: FPSQIKRARRGERSGRGLPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 3 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR GCA 72 bp TATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATaGAGGGCGCATCGCCACTACCGAAAGAGCAACTAC +
Preference number: 3 (lower is better)
Translates to: YFESSRSTGEET*RAHRHYRKSNY
Trigger: GTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 3 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 3 (lower is better)
Translates to: FCYFESSRSTGEETCRAHFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR TCA 72 bp TTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCATCGCCACTACCGAAA +
Preference number: 3 (lower is better)
Translates to: LFLLFRVVTIHG*GDMQGASPLPK
Trigger: TTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCACTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 3 (lower is better)
Translates to: DFVSVISSRHDPRVRRHALTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
3UTR-3UTR CAA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 3 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGCCAGCCCCACAGGACTaGGATGGGCCGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGPAPQD*DGPDLG
Trigger: GCCGAGGTCCGGCCCATCCCAGTCCTGTGGGGCTGG...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGCGAGCCCGGGGGCTaGAGCTGCCACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRGEPGG*SCHLGS
Trigger: AGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGGGAGGGAGGATGAGTaGACGCCCGGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRGREDE*TPGCCG
Trigger: CCCGCAGCAGCCGGGCGTTCACTCATCCTCCCTCCC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRGPAPR*AASPRR
Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGCAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGQGRTP*WASSTM
Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGREAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGTGCACTGGGGGCGCATaGCTCGCGCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRCTGGA*LALQLQ
Trigger: CTGCAGCTGCAGCGCGAGCCATGCGCCCCCAGTGCA...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCCGGGCCACTGGAGCCTaGCTGGGCGCCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPARATGA*LGAGFP
Trigger: AGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCG...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACCCAGCCCCACAGGACTaGGATGGGCCGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHPAPQD*DGPDLG
Trigger: GCCGAGGTCCGGCCCATCCCAGTCCTGTGGGGCTGG...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRGPAPR*AASPRR
Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGTGGGTCCGGGGTCTCTaGCCGGCCAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRAWVRGL*PASPTG
Trigger: TCCTGTGGGGCTGGCCGGGCAGAGACCCCGGACCCA...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCTGGTTCACACCCCCGTaGCCTGCTGCCGGACCCGCG +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVWFTPP*PAAGPA
Trigger: CGCGGGTCCGGCAGCAGGGCACGGGGGTGTGAACCA...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPAEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRASSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRRESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACCGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHRPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTCGGGGATGTCCGAGGTaGCGCCTGCGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TETSGARQQVAPESGRVARGCPR*RLREGS
Trigger: GCTCCCCTCCCGCAGGCGCCACCTCGGACATCCCCG...AGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGGGGCTCCTCCGGGTTaGCCGGAGCTTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGGAPPG*PELATA
Trigger: TGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCC...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
73% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGGGCTCCTCCGGGTTaGCCGGAGCTTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRGAPPG*PELATA
Trigger: TGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGCCCCACAGGACTaGGATGGGCCGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSPAPQD*DGPDLG
Trigger: GCCGAGGTCCGGCCCATCCCAGTCCTGTGGGGCTGG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTGTGGGGGAGGGAGGATaGGTGAACGCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSVGEGG*VNARLL
Trigger: CAGCAGCCGGGCGTTCACTCATCCTCCCTCCCCCAC...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGTGGCCCCAGGTGGGTTaGGGCTGCGAGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQWPQVG*GCEKTR
Trigger: CCGAGTCTTCTCGCAGCCGCAACCCACCTGGGGCCA...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR GCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRAVAAT*HCRGSG
Trigger: CCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPASLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGGGGGCTCCTCCGGGTTaGCCGGAGCTTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRGAPPG*PELATA
Trigger: TGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCC...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
72% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCACACCCCCGTGCCCTaGGTGCATCGCGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSHTPVP*VHRGEG
Trigger: CCCTTCTCCGCGATGCACCCAGGGCACGGGGGTGTG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGCGGGCCACTGGAGCCTaGCTGGGCGCCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRRATGA*LGAGFP
Trigger: AGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCG...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRVTIHG*GDMQGA
Trigger: TGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGAC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGACACCCCCGTGCCGGTaGATCGCGGAGAAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRATPPCR*IAEKGS
Trigger: AGACCCCTTCTCCGCGATGCACCGGCACGGGGGTGT...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361791.7
CDS-3UTR GCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCCCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRPRHHS*QGGGGV
Trigger: TACCCCACCTCCACCCTGGCAGGAATGGTGCCTGGG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGGGAGTAGGATCCCACTaGGTCATTGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGGVGSH*VIGGAG
Trigger: TCCAGCGCCTCCAATGACCCAGTGGGATCCTACTCC...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGGLSKC*RVGEVG
Trigger: GCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCC...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGAGCTCCCCTGGAACCTaGTCATCCGAGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRSSPGT*SSERRW
Trigger: CCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCT...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCGGGGCTCGGGGCTaGGCGGTCAGCAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRVGARG*AVSRMA
Trigger: GGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGAC...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCCCACAGGACTGGGATaGGCCGGACCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRPTGLG*AGPRRP
Trigger: AGGGCGCCGAGGTCCGGCCCATCCCAGTCCTGTGGG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCGCCGCCCGGAGATCTaGGCGCAGCCACCCAACACC +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGRRPEI*AQPPNT
Trigger: GGTGTTGGGTGGCTGCGCCCAGATCTCCGGGCGGCG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVVTIHG*GDMQGA
Trigger: TGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGAC...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRASSTMR*LTTSGR
Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRCLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSPRHHS*QGGGGV
Trigger: TACCCCACCTCCACCCTGGCAGGAATGGTGCCTGGG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGACGGGTGAGGAGACATaGAGGGCGCATCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQTGEET*RAHRHY
Trigger: GTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGT...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGTCGCCACTTTGGGCTTaGAGCCACCGATCACACCCG +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRSPLWA*SHRSHP
Trigger: CGGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGA...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPAGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSAAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGRPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGTCGGGGCTCGGGGCTaGGCGGTCAGCAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGVGARG*AVSRMA
Trigger: GGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGAC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCACTGCGCTCCCCGCTaGGGCTCCTCCGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAHCAPR*GSSGLA
Trigger: GGCCAACCCGGAGGAGCCCCAGCGGGGAGCGCAGTG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGAGAACTCGCTCCAGTaGGTTGCACACAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRENSLQ*VAHKGA
Trigger: TGCCCCCTTGTGTGCAACCCACTGGAGCGAGTTCTC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR TCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSAPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: EAGARGWAALRSALIVCHNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TETSGARQQVAPESGRVASSTMR*LTTSGR
Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...AGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRSSTMR*LTTSGR
Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSAVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPASQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACACCTCGGATCTAGCCTaGGGAGACAGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDTSDLA*GDRAAG
Trigger: CCCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGT...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCACGGGTGAGGAGACATaGAGGGCGCATCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSATGEET*RAHRHY
Trigger: GTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGT...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCAGGTGGGTTGCGGCTaGGAGAAGACTCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRQVGCG*EKTRPE
Trigger: CTCCGGCCGAGTCTTCTCGCAGCCGCAACCCACCTG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR GCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGTGGCCCCAGGTGGGTTaGGGCTGCGAGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRWPQVG*GCEKTR
Trigger: CCGAGTCTTCTCGCAGCCGCAACCCACCTGGGGCCA...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTCGCCACTTTGGGCTTaGAGCCACCGATCACACCCG +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPASPLWA*SHRSHP
Trigger: CGGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGA...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGGGAGTAGGATCCCACTaGGTCATTGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQGVGSH*VIGGAG
Trigger: TCCAGCGCCTCCAATGACCCAGTGGGATCCTACTCC...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCCCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPAPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPRESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGGCGAGCCCGGGGGCTaGAGCTGCCACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAGEPGG*SCHLGS
Trigger: AGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCTGCACTGGGGGCGCATaGCTCGCGCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGCTGGA*LALQLQ
Trigger: CTGCAGCTGCAGCGCGAGCCATGCGCCCCCAGTGCA...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGTCGGGGCTCGGGGCTaGGCGGTCAGCAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAVGARG*AVSRMA
Trigger: GGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGAC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGGGAGAGAGATCTaGGCGAGGACTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRQGREI*ARTPSL
Trigger: AAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGTGGGGGAGGGAGGATaGGTGAACGCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAVGEGG*VNARLL
Trigger: CAGCAGCCGGGCGTTCACTCATCCTCCCTCCCCCAC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RDELGRIPLTAPRSPGRRVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...CCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSNQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPAVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSAVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTGGGTTGGCCGGAGCTTaGAACTGCAGTAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: TETSGARQQVAPESGRVAGLAGA*NCSSRN
Trigger: GTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCC...AGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCCCCGCGCACACGCGTaGACACGCACCGAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGPRAHA*TRTEAP
Trigger: TGGGGCCTCGGTGCGTGTGCACGCGTGTGCGCGGGG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAQGRTP*WASSTM
Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGCTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGLSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPARESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGARESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCCGGGGATGTCCGAGGTaGCGCCTGCGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTRGCPR*RLREGS
Trigger: GCTCCCCTCCCGCAGGCGCCACCTCGGACATCCCCG...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCATCATCCGAGAGGCGGTaGTCGGAGAGCGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLASSERR*SESARG
Trigger: GCCCCGCGCGCTCTCCGACCACCGCCTCTCGGATGA...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGCACTGCGCTCCCCGCTaGGGCTCCTCCGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVHCAPR*GSSGLA
Trigger: GGCCAACCCGGAGGAGCCCCAGCGGGGAGCGCAGTG...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
CDS-3UTR CCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCCCACAGGACTGGGATaGGCCGGACCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREPTGLG*AGPRRP
Trigger: AGGGCGCCGAGGTCCGGCCCATCCCAGTCCTGTGGG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCCCCACAGGACTGGGATaGGCCGGACCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCPTGLG*AGPRRP
Trigger: AGGGCGCCGAGGTCCGGCCCATCCCAGTCCTGTGGG...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPASPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGCCGGATCTCCATTGGGGACTaGGCCCTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: PGGWSCHLGSSLRRQGGRISIGD*ALRHIF
Trigger: GAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...CCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: TETSGARQQVAPESGRVARCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...AGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSGSALQ*ISMGRQ
Trigger: CTGCCTCCCCATGGATATGCACTGCAAAGCAGACCC...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRAGSALQ*ISMGRQ
Trigger: CTGCCTCCCCATGGATATGCACTGCAAAGCAGACCC...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDGPAPR*AASPRR
Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGCLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGGGCTG*RRTRSQ
Trigger: CTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDGGCTG*RRTRSQ
Trigger: CTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCCCTCCCCCAGGACGTaGTGTGCTTTAATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGPSPRT*CALMGV
Trigger: CACGCCCATTAAAGCACAGCACGTCCTGGGGGAGGG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGACGGGTGAGGAGACATaGAGGGCGCATCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRTGEET*RAHRHY
Trigger: GTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGT...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAAVAAT*HCRGSG
Trigger: CCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGGCCGGAGCTTGCAACTaGAGTAGCCGCAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRAGACN*SSRNLP
Trigger: TGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGC...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATCAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDQGRTP*WASSTM
Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTTCTTGTCCACCACTTTaGGCGTCGCCACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSSCPPL*ASPLWA
Trigger: AGCCCAAAGTGGCGACGCCCAAAGTGGTGGACAAGA...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCCCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCGGGGATGTCCGAGGTaGCGCCTGCGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGRGCPR*RLREGS
Trigger: GCTCCCCTCCCGCAGGCGCCACCTCGGACATCCCCG...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGTCATCCGAGAGGCGGTaGTCGGAGAGCGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVSSERR*SESARG
Trigger: GCCCCGCGCGCTCTCCGACCACCGCCTCTCGGATGA...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGCTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAG +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRLAQLP*NLVIRE
Trigger: CTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAG...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAG +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGLAQLP*NLVIRE
Trigger: CTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCATGCACTGGGGGCGCATaGCTCGCGCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLACTGGA*LALQLQ
Trigger: CTGCAGCTGCAGCGCGAGCCATGCGCCCCCAGTGCA...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGGTCGGGGCTCGGGGCTaGGCGGTCAGCAGAATGGCC +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVVGARG*AVSRMA
Trigger: GGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGAC...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
CDS-3UTR CCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCACACCCCCGTGCCCTaGGTGCATCGCGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREHTPVP*VHRGEG
Trigger: CCCTTCTCCGCGATGCACCCAGGGCACGGGGGTGTG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp TGTGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: CVTETSGARQQVAPESGRRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...CCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRLPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAVTIHG*GDMQGA
Trigger: TGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGAC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRARGEGV*FAVHIH
Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPARGEGV*FAVHIH
Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHSSTMR*LTTSGR
Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACACAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ASPGAGAATSDLACGDRAVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPCLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGCCCTCCCCCAGGACGTaGTGTGCTTTAATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPPSPRT*CALMGV
Trigger: CACGCCCATTAAAGCACAGCACGTCCTGGGGGAGGG...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCCCCTCCCCCAGGACGTaGTGTGCTTTAATGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGPSPRT*CALMGV
Trigger: CACGCCCATTAAAGCACAGCACGTCCTGGGGGAGGG...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGACCTCGGATCTAGCCTaGGGAGACAGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVTSDLA*GDRAAG
Trigger: CCCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGT...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACAGGTGGGTTGCGGCTaGGAGAAGACTCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAQVGCG*EKTRPE
Trigger: CTCCGGCCGAGTCTTCTCGCAGCCGCAACCCACCTG...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGCCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPPGLSK*WRVGEV
Trigger: AACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGG...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGGGGTTGGCCGGAGCTTaGAACTGCAGTAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALGLAGA*NCSSRN
Trigger: GTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCC...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGGGGTTGGCCGGAGCTTaGAACTGCAGTAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPGLAGA*NCSSRN
Trigger: GTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCC...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTTGGGTCCGGGGTCTCTaGCCGGCCAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRWVRGL*PASPTG
Trigger: TCCTGTGGGGCTGGCCGGGCAGAGACCCCGGACCCA...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCACAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPQGRTP*WASSTM
Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTGGCTATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: TETSGARQQVAPESGRVAIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...AGCCACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPASGNLH*GLSPQT
Trigger: TGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGA...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCCCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: ATTERATTGRDGAARPSAPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDGLSKC*RVGEVG
Trigger: GCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCC...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCCTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAG +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGLAQLP*NLVIRE
Trigger: CTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAG...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCACACCCCCGTGCCCTaGGTGCATCGCGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGHTPVP*VHRGEG
Trigger: CCCTTCTCCGCGATGCACCCAGGGCACGGGGGTGTG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGTGGGGGAGGGAGGATaGGTGAACGCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTVGEGG*VNARLL
Trigger: CAGCAGCCGGGCGTTCACTCATCCTCCCTCCCCCAC...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTGTGGGGGAGGGAGGATaGGTGAACGCCCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGVGEGG*VNARLL
Trigger: CAGCAGCCGGGCGTTCACTCATCCTCCCTCCCCCAC...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGAACGAACCGACGCACTaGAAGTGGCCGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALNEPTH*KWPRRP
Trigger: TGGTCTCCTCGGCCACTTTCAGTGCGTCGGTTCGTT...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGGPAPR*AASPRR
Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPACLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCCCCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPPRHHS*QGGGGV
Trigger: TACCCCACCTCCACCCTGGCAGGAATGGTGCCTGGG...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAGGCTG*RRTRSQ
Trigger: CTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTACGGGTGAGGAGACATaGAGGGCGCATCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGATGEET*RAHRHY
Trigger: GTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGT...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCCCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGPGLSK*WRVGEV
Trigger: AACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGG...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACACCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 4 (lower is better)
Translates to: KGSQGREIWARTPSLFGFVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGCGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTRPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCAGGGGCTCCTCCGGGTTaGCCGGAGCTTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPGAPPG*PELATA
Trigger: TGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCC...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTTCCTGGGGCTGGGTCTaGCTGTCCCGCTCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATSWGWV*LSRSSA
Trigger: CGCGGAGGAGCGGGACAGCCAGACCCAGCCCCAGGA...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679374.1
CDS-3UTR TCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPSPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDSPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTCGGGGCTGGCTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FGAGLVEAGTSWAESPSRSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPANLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPALPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTGGGAGGGAGGATGAGTaGACGCCCGGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFGREDE*TPGCCG
Trigger: CCCGCAGCAGCCGGGCGTTCACTCATCCTCCCTCCC...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAACGAACCGACGCACTaGAAGTGGCCGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGNEPTH*KWPRRP
Trigger: TGGTCTCCTCGGCCACTTTCAGTGCGTCGGTTCGTT...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: GGCPGLGRAAVRADCVSQCSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...CTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPANQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATNQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGCCGGAGCTTGCAACTaGAGTAGCCGCAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHAGACN*SSRNLP
Trigger: TGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGC...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTTGGGTCCGGGGTCTCTaGCCGGCCAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFWVRGL*PASPTG
Trigger: TCCTGTGGGGCTGGCCGGGCAGAGACCCCGGACCCA...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTGGGTCCGGGGTCTCTaGCCGGCCAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGWVRGL*PASPTG
Trigger: TCCTGTGGGGCTGGCCGGGCAGAGACCCCGGACCCA...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCATCGCCACTTTGGGCTTaGAGCCACCGATCACACCCG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLASPLWA*SHRSHP
Trigger: CGGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGA...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTCTTGTCCACCACTTTaGGCGTCGCCACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPSCPPL*ASPLWA
Trigger: AGCCCAAAGTGGCGACGCCCAAAGTGGTGGACAAGA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCCCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCAGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGGAGTAGGATCCCACTaGGTCATTGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAGVGSH*VIGGAG
Trigger: TCCAGCGCCTCCAATGACCCAGTGGGATCCTACTCC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGTCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCCCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGGCAGTCTATGGAAACTaGTCCTGCGGCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGAVYGN*SCGGPG
Trigger: CCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGQVLAS*RSWQRS
Trigger: ACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCGLSKC*RVGEVG
Trigger: GCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCC...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGAGCTCCCCTGGAACCTaGTCATCCGAGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVSSPGT*SSERRW
Trigger: CCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCT...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
CDS-3UTR CCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTCCAGCCCCACAGGACTaGGATGGGCCGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: KGSQGREIWARTPSLFGFPAPQD*DGPDLG
Trigger: GCCGAGGTCCGGCCCATCCCAGTCCTGTGGGGCTGG...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGATCACACCCGGCTTaGTGCTGCCGGTCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGRSHPA*CCRSRS
Trigger: ACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACCAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDLPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCATTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLALPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAACGAACCGACGCACTaGAAGTGGCCGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: RKTPVRSLWKLVLRRSRENEPTH*KWPRRP
Trigger: TGGTCTCCTCGGCCACTTTCAGTGCGTCGGTTCGTT...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGTCCCCGGCTTGCTCATaGGGGAGGATGAGGGACCAA +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVSPACS*GRMRDQ
Trigger: TTGGTCCCTCATCCTCCCTCATGAGCAAGCCGGGGA...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR GCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGTCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALSKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACTCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDSKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTGGCTG*RRTRSQ
Trigger: CTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTSVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTACCTCGGATCTAGCCTaGGGAGACAGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFTSDLA*GDRAAG
Trigger: CCCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGT...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGTGGGTCCGGGGTCTCTaGCCGGCCAGCCCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLWVRGL*PASPTG
Trigger: TCCTGTGGGGCTGGCCGGGCAGAGACCCCGGACCCA...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGTCCCTCCCTCCGGGGTaGGGTCAGACGGGGACGATG +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLSLPPG*GQTGTM
Trigger: CATCGTCCCCGTCTGACCCCACCCCGGAGGGAGGGA...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCTCCAGCGAAGCCTCCTaGCGCCCGAGCGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVSSEAS*RPSVRG
Trigger: GCCTCGGACGCTCGGGCGCCAGGAGGCTTCGCTGGA...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLARGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LGGGRDELGRIPLTAPRSKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...ACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCGGGGATGTCCGAGGTaGCGCCTGCGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGRGCPR*RLREGS
Trigger: GCTCCCCTCCCGCAGGCGCCACCTCGGACATCCCCG...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTTCATCCGAGAGGCGGTaGTCGGAGAGCGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFSSERR*SESARG
Trigger: GCCCCGCGCGCTCTCCGACCACCGCCTCTCGGATGA...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGAGCTCCCCTGGAACCTaGTCATCCGAGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGSSPGT*SSERRW
Trigger: CCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCT...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGACACTGCGCTCCCCGCTaGGGCTCCTCCGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGHCAPR*GSSGLA
Trigger: GGCCAACCCGGAGGAGCCCCAGCGGGGAGCGCAGTG...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCCACACCCCCGTGCCCTaGGTGCATCGCGGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGHTPVP*VHRGEG
Trigger: CCCTTCTCCGCGATGCACCCAGGGCACGGGGGTGTG...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGGGCCACTGGAGCCTaGCTGGGCGCCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: FCYFESSRSTGEETCRAHRATGA*LGAGFP
Trigger: AGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCCCACAGGACTGGGATaGGCCGGACCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLPTGLG*AGPRRP
Trigger: AGGGCGCCGAGGTCCGGCCCATCCCAGTCCTGTGGG...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGACAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGCLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAACCTCGGATCTAGCCTaGGGAGACAGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSTSDLA*GDRAAG
Trigger: CCCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGT...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGCCGGAGCTTGCAACTaGAGTAGCCGCAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTAGACN*SSRNLP
Trigger: TGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGC...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCAGGAGTAGGATCCCACTaGGTCATTGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPGVGSH*VIGGAG
Trigger: TCCAGCGCCTCCAATGACCCAGTGGGATCCTACTCC...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACACTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATLSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTGTGAGGCTGGGGCGGTaGCCGGGAGGCATCGCGTCG +
Preference number: 4 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVVRLGR*PGGIAS
Trigger: CGACGCGATGCCTCCCGGCCACCGCCCCAGCCTCAC...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCTCGGGGCTGGCTTGGTaGAGGCCGGGACGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGSGLAW*RPGRAG
Trigger: CCCAGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGA...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGGCGAGCCCGGGGGCTaGAGCTGCCACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQGEPGG*SCHLGS
Trigger: AGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGACTGGCAGCTCTGGGCTaGCCCCAGGTGGGTTGCGGC +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGLAALG*PQVGCG
Trigger: GCCGCAACCCACCTGGGGCCAGCCCAGAGCTGCCAG...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR CCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACGCGAGTTGGCGAAGTTaGCAGAGAAGTAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHASWRS*QRSSNP
Trigger: GGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGC...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATTCATCCGAGAGGCGGTaGTCGGAGAGCGCGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FCYFESSRSTGEETCRAHSSERR*SESARG
Trigger: GCCCCGCGCGCTCTCCGACCACCGCCTCTCGGATGA...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCAGGGGAGAGAGATCTaGGCGAGGACTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGQGREI*ARTPSL
Trigger: AAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCACAGGGGAGAGAGATCTaGGCGAGGACTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPQGREI*ARTPSL
Trigger: AAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCATCTCCATTGGGGACTaGGCCCTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPISIGD*ALRHIF
Trigger: GAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000679374.1
CDS-3UTR TCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGATCTCCATTGGGGACTaGGCCCTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREISIGD*ALRHIF
Trigger: GAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000679374.1
CDS-3UTR TCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT +
Preference number: 4 (lower is better)
Translates to: RKTPVRSLWKLVLRRSRERGEGV*FAVHIH
Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGGGCCAGCTCCACGATaGGCTGCCTCACCACGTCGG +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQGPAPR*AASPRR
Trigger: CCGACGTGGTGAGGCAGCGCATCGTGGAGCTGGCCC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCATCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLASKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGNQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGGGCTG*RRTRSQ
Trigger: CTGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCSGNLH*GLSPQT
Trigger: TGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGA...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLALSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: RNYRERANKTGQRSPQDHPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACTGCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSSGTGHTRKARAVRLALHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...CAGTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQRPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCGGCGAGCCCGGGGGCTaGAGCTGCCACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVGEPGG*SCHLGS
Trigger: AGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCC...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTCTGGCAGCTCTGGGCTaGCCCCAGGTGGGTTGCGGC +
Preference number: 4 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVLAALG*PQVGCG
Trigger: GCCGCAACCCACCTGGGGCCAGCCCAGAGCTGCCAG...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR CCA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGCGAGTTGGCGAAGTTaGCAGAGAAGTAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAASWRS*QRSSNP
Trigger: GGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATGCACTGGGGGCGCATaGCTCGCGCTGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGCTGGA*LALQLQ
Trigger: CTGCAGCTGCAGCGCGAGCCATGCGCCCCCAGTGCA...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCCGATCACACCCGGCTTaGTGCTGCCGGTCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGRSHPA*CCRSRS
Trigger: ACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCG...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGSPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGATCTCCATTGGGGACTaGGCCCTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVISIGD*ALRHIF
Trigger: GAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000679374.1
CDS-3UTR TCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCACAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGACGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLVTIHG*GDMQGA
Trigger: TGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGAC...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGAGCTCCACGATGCGCTaGCTCACCACGTCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLSSTMR*LTTSGR
Trigger: CCTACCCGACGTGGTGAGGCAGCGCATCGTGGAGCT...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGAAACATCCGTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: PGLGRAAVRADCVSQKHPCSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...CGGATGTTTCTGTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPAVAAT*HCRGSG
Trigger: CCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGC...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTCTCGCTCCAGTGGGTTaGACACAAGGGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATLAPVG*TQGGTS
Trigger: AGAAGTGCCCCCTTGTGTGCAACCCACTGGAGCGAG...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR GCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGGTGGCTGTACGGGTTaGCGGAGAACTCGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KGSQGREIWARTPSLFGFGGCTG*RRTRSS
Trigger: ACTGGAGCGAGTTCTCCGGCAACCCGTACAGCCACC...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCACCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTGGAGTAGGATCCCACTaGGTCATTGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATGVGSH*VIGGAG
Trigger: TCCAGCGCCTCCAATGACCCAGTGGGATCCTACTCC...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RVRRHAGRIATTERATTGSGNLH*GLSPQT
Trigger: TGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGA...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGCTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVLSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCGCTTCGGGGCTGGCTTaGTGGAGGCCGGGACGAGCT +
Preference number: 4 (lower is better)
Translates to: FPSQIKRARRGERSGRGLASGLA*WRPGRA
Trigger: AGCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGC...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGTCCGGCAGGGTGGCTaGCGGGCTTCGGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEVRQGG*RASGLA
Trigger: AGCCAGCCCCGAAGCCCGCCAGCCACCCTGCCGGAC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCGATCACACCCGGCTTaGTGCTGCCGGTCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLRSHPA*CCRSRS
Trigger: ACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCG...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCACGATCACACCCGGCTTaGTGCTGCCGGTCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSRSHPA*CCRSRS
Trigger: ACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCG...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLNLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGATCTCCATTGGGGACTaGGCCCTCAGACACATCTCT +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGISIGD*ALRHIS
Trigger: AGAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS-3UTR GCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLNQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCAGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTAGTCAGGGAGGAGGATaGAGGGCGTCAAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCSQGGG*RASRDR
Trigger: CCTGTCCCTTGACGCCCTGCATCCTCCTCCCTGACT...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTCCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCPGLSK*WRVGEV
Trigger: AACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGG...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAATCCCACTGGGTCATTaGAGGCGCTGGAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRIPLGH*RRWKQE
Trigger: CTCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGAT...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTTCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCCATTCCTGCCAGGGTaGAGGTGGGGTAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLPFLPG*RWGSFP
Trigger: AGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGG...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGAGGCCGGGACGAGCTaGGCCGAATCCCCCTCACGG +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAEAGTS*AESPSR
Trigger: CCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTC...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATGGCGGGCTTCGGGGCTaGCTTGGTGGAGGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDGGLRG*LGGGRD
Trigger: GTCCCGGCCTCCACCAAGCCAGCCCCGAAGCCCGCC...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTCCGAGTCCGGCAGGGTaGCTGGCGGGCTTCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFPSPAG*LAGFGA
Trigger: AGCCCCGAAGCCCGCCAGCCACCCTGCCGGACTCGG...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATCGGGAGAGCGTCCGATaGGGCTGCGAGTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RNYRERANKTGQRSPQDHRESVR*GCESGR
Trigger: CCTCCCTGACTCGCAGCCCCATCGGACGCTCTCCCG...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTQVLAS*RSWQRS
Trigger: ACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTG...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCGGGCCACTGGAGCCTaGCTGGGCGCCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDRATGA*LGAGFP
Trigger: AGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTCGGGCCACTGGAGCCTaGCTGGGCGCCGGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFRATGA*LGAGFP
Trigger: AGGGAACCCGGCGCCCAGCCAGGCTCCAGTGGCCCG...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACGATCACACCCGGCTTaGTGCTGCCGGTCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQRSHPA*CCRSRS
Trigger: ACTACGAGACCGGCAGCATCAAGCCGGGTGTGATCG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFSPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGCAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RARRGERSGRGLQAFSDLQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...CAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCVCLCA*HVAAQL
Trigger: GAGCTGGGCAGCAACGTGTCAGGCACACAGACATAC...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTGGGAGGGAGGATGAGTaGACGCCCGGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFGREDE*TPGCCG
Trigger: CCCGCAGCAGCCGGGCGTTCACTCATCCTCCCTCCC...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR TCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGCTCATGAGGGAGGATaGGGGACCAACTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQAHEGG*GTNCSL
Trigger: GAGGCTGCAGTTGGTCCCTCATCCTCCCTCATGAGC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPCLTRC*PAQGWW
Trigger: CCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCA...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGAGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCAACCAGGCAGAGTGGTaGTCGCCATGTCACGACCAG +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVNQAEW*SPCHDQ
Trigger: CTGGTCGTGACATGGCGAGCACCACTCTGCCTGGTT...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: IRQRALPPAESRFLLNLLPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTTCGCCACTTTGGGCTTaGAGCCACCGATCACACCCG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPSPLWA*SHRSHP
Trigger: CGGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGA...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTAGCCCCATCCGGCGTTaGGTGGAAAGGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPSPIRR*VERLLN
Trigger: GTTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCT...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: KGSQGREIWARTPSLFGFCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTCCAGTCCGCAGTCTATaGAAACTGGTCCTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPPVRSL*KLVLRR
Trigger: CCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGG...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCGGCCGGGCCAGGTCTaGGGAGAGAGGCCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIERPGQV*GERPRK
Trigger: TTTCCTCGGCCTCTCTCCCCAGACCTGGCCCGGCCG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTGGCGAGCCCGGGGGCTaGAGCTGCCACCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFGEPGG*SCHLGS
Trigger: AGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGCC...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCCCACAGGACTGGGATaGGCCGGACCTCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDPTGLG*AGPRRP
Trigger: AGGGCGCCGAGGTCCGGCCCATCCCAGTCCTGTGGG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGT +
Preference number: 4 (lower is better)
Translates to: FPSQIKRARRGERSGRGLPAAAG*RCQLAS
Trigger: ACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGG...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: FPSQIKRARRGERSGRGLCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCAGGTGGAAGAGACGCTaGGGTAGGGGCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCRWKRR*GRGKAG
Trigger: CCCTGCCTTGCCCCTACCTCAGCGTCTCTTCCACCT...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFGSALQ*ISMGRQ
Trigger: CTGCCTCCCCATGGATATGCACTGCAAAGCAGACCC...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATTATGGAAACTGGTCCTaGGGCGGTCCCGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: RNYRERANKTGQRSPQDHYGNWS*GGPGRA
Trigger: CGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATA...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCACCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGCCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KTRNYRERANKTGQRSPQPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAAVAAT*HCRGSG
Trigger: CCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGC...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCGGGTTGGCCGGAGCTTaGAACTGCAGTAGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: FPSQIKRARRGERSGRGLGLAGA*NCSSRN
Trigger: GTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCC...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAACAAGGGGGCACTTCTaGAAGCTTCCTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQTRGHF*KLPPRL
Trigger: AAGCCGGGGAGGAAGCTTGCAGAAGTGCCCCCTTGT...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR CCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGCAGGGCCGCACACCCTaGTGGGCCAGCTCCACGATG +
Preference number: 4 (lower is better)
Translates to: KTRNYRERANKTGQRSPQQGRTP*WASSTM
Trigger: CATCGTGGAGCTGGCCCACCAGGGTGTGCGGCCCTG...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATCCGTGCTGGGAACAATaGTGTGGCCAGGGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RNYRERANKTGQRSPQDHPCWEQ*CGQGRS
Trigger: TGACCGCCCCTGGCCACACCATTGTTCCCAGCACGG...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTTCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GGGVMYTGFRLHTTHTVFSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...AAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGTCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGFRLHTTHTVFPQSSSLSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...CAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGSGNLH*GLSPQT
Trigger: TGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGA...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGCCGTGTACTGGGGGTaGCTGTACGGGTTGCCGGAG +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEAVYWG*LYGLPE
Trigger: CTCCGGCAACCCGTACAGCCACCCCCAGTACACGGC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCACAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: FCYFESSRSTGEETCRAHRGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTTCCCCAGGATCCCATTaGTGGAGTAGGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPSPGSH*WSRIPL
Trigger: CAGTGGGATCCTACTCCATCAATGGGATCCTGGGGA...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTATCTCCATTGGGGACTaGGCCCTCAGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCISIGD*ALRHIF
Trigger: GAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGAT...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000679374.1
CDS-3UTR TCA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTTCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KGSQGREIWARTPSLFGFSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCCAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTCAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTCAGATAGACTCGACTTaGCTTCATCAAGCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCQIDST*LHQAQG
Trigger: CCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTG...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGTCACGATCCACGGGTaGGGAGACATGCAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEVTIHG*GDMQGA
Trigger: TGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGAC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCAGGAGGGGAGGCCGTaGTGGGAACAATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEQEGRP*WEQWCG
Trigger: GCCACACCATTGTTCCCAGCACGGCCTCCCCTCCTG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTTCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCSKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCVCLTR*CPAQGW
Trigger: CCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACAC...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCCCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEPRHHS*QGGGGV
Trigger: TACCCCACCTCCACCCTGGCAGGAATGGTGCCTGGG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGAGCGTCCGATGGGGCTaGGAGTCAGGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIESVRWG*ESGRRM
Trigger: CATCCTCCTCCCTGACTCGCAGCCCCATCGGACGCT...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATTCTTGTCCACCACTTTaGGCGTCGCCACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FCYFESSRSTGEETCRAHSCPPL*ASPLWA
Trigger: AGCCCAAAGTGGCGACGCCCAAAGTGGTGGACAAGA...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTCCCAGGGGTCAGGGCTaGGAGGGAGTACTCGTTCCC +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFPRGQG*EGVLVP
Trigger: GGGAACGAGTACTCCCTCCCAGCCCTGACCCCTGGG...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCAGACGGGGACGATGTaGAGGCCGAAGCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDQTGTM*RPKLSA
Trigger: GGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCCTTCTCAAATAAAAAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FPSQIKRARRGERSGRGLLGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...GAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTTTTTATTTGAGAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: FCYFESSRSTGEETCRAHASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGAGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGCGAGTTGGCGAAGTTaGCAGAGAAGTAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLASWRS*QRSSNP
Trigger: GGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGC...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFQVLAS*RSWQRS
Trigger: ACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTG...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCGLSKC*RVGEVG
Trigger: GCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCC...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACC +
Preference number: 4 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFPPPLM*AGSVYT
Trigger: GGTATACACTGATCCTGCCCACATTAGAGGAGGTGG...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS-3UTR TCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGCCGAAGCTGTCGGCCTaGAGCTTGATGTGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: KTRNYRERANKTGQRSPQPKLSA*SLMWSP
Trigger: CGGGGACCACATCAAGCTTCAGGCCGACAGCTTCGG...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAGGGAGGGAGGATGAGTaGACGCCCGGCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVGREDE*TPGCCG
Trigger: CCCGCAGCAGCCGGGCGTTCACTCATCCTCCCTCCC...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATCSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTTCGCCACTTTGGGCTTaGAGCCACCGATCACACCCG +
Preference number: 4 (lower is better)
Translates to: IRQRALPPAESRFLLNLLSPLWA*SHRSHP
Trigger: CGGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGA...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATGAGGGGAGGCCGTGCTaGGAACAATGGTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDEGRPC*EQWCGQ
Trigger: CTGGCCACACCATTGTTCCCAGCACGGCCTCCCCTC...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAATCCTCTTCTCACCATTaGAGCGAGGAATCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQSSSHH*SEESPG
Trigger: TCCTGGGGATTCCTCGCTCCAATGGTGAGAAGAGGA...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RQRALPPAESRFLLNLLGSGNLH*GLSPQT
Trigger: TGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGA...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSRHDPRVRRHAGRIATTNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...GGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGAGCGAGTTGGCGAAGTTaGCAGAGAAGTAGCAATCCC +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGASWRS*QRSSNP
Trigger: GGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGC...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATAGCTCCCCTGGAACCTaGTCATCCGAGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDSSPGT*SSERRW
Trigger: CCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCT...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATCAGGGGAGAGAGATCTaGGCGAGGACTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RNYRERANKTGQRSPQDHQGREI*ARTPSL
Trigger: AAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATCCCCTGTTCTGATTTaGTGTGCTCTGATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QGREIWARTPSLFGFVQGSPVLI*CALMPG
Trigger: TCCAGGCATCAGAGCACATCAAATCAGAACAGGGGA...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTTGTCGGCCTGAAGCTTaGTGTGGTCCCCGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFCRPEA*CGPRGN
Trigger: GTTACCGCGGGGACCACATCAAGCTTCAGGCCGACA...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAAACGAACCGACGCACTaGAAGTGGCCGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHANEPTH*KWPRRP
Trigger: TGGTCTCCTCGGCCACTTTCAGTGCGTCGGTTCGTT...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAACCTCGGATCTAGCCTaGGGAGACAGGGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVTSDLA*GDRAAG
Trigger: CCCGGCCGCCCTGTCTCCGCAGGCTAGATCCGAGGT...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTACCCGGGGGCTGGAGCTaGCACCTCGGATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVPGGWS*HLGSSL
Trigger: CAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGG...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTACGGGTGAGGAGACATaGAGGGCGCATCGCCACTAC +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEITGEET*RAHRHY
Trigger: GTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGT...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGCCGGAGCTTGCAACTaGAGTAGCCGCAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: IRQRALPPAESRFLLNLLAGACN*SSRNLP
Trigger: TGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGC...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAAAGTCCAGACCAGATaGAAACCTCCACCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LAGERDLGEDSKPFRICSKVQTR*KPPPPL
Trigger: TAGAGGAGGTGGAGGTTTGCATCTGGTCTGGACTTT...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS-3UTR CCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCTCTTGTCCACCACTTTaGGCGTCGCCACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCSCPPL*ASPLWA
Trigger: AGCCCAAAGTGGCGACGCCCAAAGTGGTGGACAAGA...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCGAGGGCAGTCCGGCTaGCACTGGGGGAAAAGAATT +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIERGQSG*HWGKRI
Trigger: AATTCTTTTCCCCCAGTGCCAGCCGGACTGCCCTCG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTCCCCATTCCATCTTCTaGGACAGGGCACACCCGGAA +
Preference number: 4 (lower is better)
Translates to: IRQRALPPAESRFLLNLLPHSIF*DRAHPE
Trigger: TTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGAATGTAGACTTTTTGTaGTTCTGTTCAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRVRRHAGRIATTERATTNVDFL*FCSVPA
Trigger: GGCAGGAACTGAACAGAACCACAAAAAGTCTACATT...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGCTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAG +
Preference number: 4 (lower is better)
Translates to: KTRNYRERANKTGQRSPQLAQLP*NLVIRE
Trigger: CTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAG...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCAGGGGAGAGAGATCTaGGCGAGGACTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEQGREI*ARTPSL
Trigger: AAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCGCTGCGGTCCGCGCTaGTTGTGTGTCACAGAAACA +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDRCGPR*LCVTET
Trigger: TGTTTCTGTGACACACAATCAGCGCGGACCGCAGCG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTACCACCGGCAGATTaGGAGTCTGTGTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDLPPAD*ESVSGE
Trigger: CTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAA...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR TCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTAACGAACCGACGCACTaGAAGTGGCCGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEINEPTH*KWPRRP
Trigger: TGGTCTCCTCGGCCACTTTCAGTGCGTCGGTTCGTT...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEGSALQ*ISMGRQ
Trigger: CTGCCTCCCCATGGATATGCACTGCAAAGCAGACCC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACA +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCVSARK*FRKLST
Trigger: TGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACAC...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFCSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGTTCTGTTCAGTTCCTaGCGGAGGAGGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KTRNYRERANKTGQRSPQVLFSS*RRRRLG
Trigger: TCCCAGCCTCCTCCTCCGGCAGGAACTGAACAGAAC...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCCCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTTGCCCAGCTCAGGGTTaGTGGATGCAGATAGACTCG +
Preference number: 4 (lower is better)
Translates to: IRQRALPPAESRFLLNLLCPAQG*WMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCA...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTCCAGCCCCACAGGACTaGGATGGGCCGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIPAPQD*DGPDLG
Trigger: GCCGAGGTCCGGCCCATCCCAGTCCTGTGGGGCTGG...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDGSALQ*ISMGRQ
Trigger: CTGCCTCCCCATGGATATGCACTGCAAAGCAGACCC...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGTCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIESKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPCSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCTGGGTATGTCTGTGTaGCTGACACGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDLGMSV*LTRCCP
Trigger: TGGGCAGCAACGTGTCAGGCACACAGACATACCCAG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp AAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KSQQNRPEESTGPCSSFCAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...GCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATCCCCAGGACGTGCTGTaGTTTAATGGGCGTGTAGCT +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDPQDVL*FNGRVA
Trigger: AGCTACACGCCCATTAAAGCACAGCACGTCCTGGGG...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTTCTTGTCCACCACTTTaGGCGTCGCCACTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFSCPPL*ASPLWA
Trigger: AGCCCAAAGTGGCGACGCCCAAAGTGGTGGACAAGA...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCACCAGCTCAGGGTTGGTaGATGCAGATAGACTCGACT +
Preference number: 4 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAPAQGW*MQIDST
Trigger: AGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGG...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTGCATCAAGTAACTGCTaGAGGAAGACCCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIASSNC*RKTPVR
Trigger: GCGGACTGGGGTCTTCCTCCAGCAGTTACTTGATGC...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCCACAAAGCAGCAGCCTaGTGGGCTTTTGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVHKAAA*WAFVLF
Trigger: AAACAACACAAAAGCCCACCAGGCTGCTGCTTTGTG...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCCAAAGCTTCCAGCTaGTGCTGGGTGAAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: TKQARGVHRTMFVILHRDSKASS*CWVKVS
Trigger: TGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTACCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVPGLSK*WRVGEV
Trigger: AACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGG...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEILSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAGGACAGGCGAAGGACTaGCAGGAGGGGAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVGQAKD*QEGKLG
Trigger: TCCCAGTTTCCCCTCCTGCCAGTCCTTCGCCTGTCC...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIQVLAS*RSWQRS
Trigger: ACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTGCGGGCTCTTCCTCCTaGAGAAAGTCGTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIAGSSS*RKSFSS
Trigger: AGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGC...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTCTCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVILRHHS*QGGGGV
Trigger: TACCCCACCTCCACCCTGGCAGGAATGGTGCCTGAG...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS-3UTR TCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTAACCTTGGAAAGACCTaGCGCCCCCAAAGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVINLGKT*RPQSPF
Trigger: GAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTT...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTACTGTCCACACCACTCTaGGAATCTCCATTGGGGACT +
Preference number: 4 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVLSTPL*ESPLGT
Trigger: AGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAG...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTGGTAACCAGGCAGAGTaGTGCTCGCCATGTCACGAC +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIGNQAE*CSPCHD
Trigger: GTCGTGACATGGCGAGCACCACTCTGCCTGGTTACC...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTCTTGGGTCCCAACCTTaGAAAGACCTGACGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVILGSQP*KDLTPP
Trigger: TGGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAG...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CCA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTAAAGCAGCAGCCTGGTaGGCTTTTGTGTTGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFKAAAW*AFVLFC
Trigger: ACAAAACAACACAAAAGCCCACCAGGCTGCTGCTTT...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTGGGGCATCAAGTAACTaGTGGAGGAAGACCCCAGTC +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIGASSN*WRKTPV
Trigger: GACTGGGGTCTTCCTCCAGCAGTTACTTGATGCCCC...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR GCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTCGCGGAGAAGGGGTCTaGTTTGCAGTGCATATCCAT +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVIRGEGV*FAVHIH
Trigger: ATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCG...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR GCA 90 bp GTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAATTTGTTCTGATTTGATGTaGTCTGATGCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: VHRTMFVILHRDFFSFVICSDLM*SDAWKT
Trigger: CGTCTTCCAGGCATCAGAGCACATCAAATCAGAACA...AATTACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS CCA 90 bp ACCCGCGCGCTCTTCCATGCTAGGCTCCCCGCGGCCGCCGCGTCCTaGGGCTGGGTCTGGCTGTCCCGCTCCTCCGCGGCCCGACAACGC +
Preference number: 5 (lower is better)
Translates to: TRALFHARLPAAAAS*GWVWLSRSSAARQR
Trigger: GCGTTGTCGGGCCGCGGAGGAGCGGGACAGCCAGACCCAGCCCCAGGACGCGGCGGCCGCGGGGAGCCTAGCATGGAAGAGCGCGCGGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553492.5
ENST00000679374.1
CDS CCA 90 bp GAAGGGCCGGGAGGGAGGGAGGGAGCCGAGCGGCGCTGGCAGCTCTaGGCTGGCCCCAGGTGGGTTGCGGCTGCGAGAAGACTCGGCCGG +
Preference number: 5 (lower is better)
Translates to: EGPGGREGAERRWQL*AGPRWVAAARRLGR
Trigger: CCGGCCGAGTCTTCTCGCAGCCGCAACCCACCTGGGGCCAGCCCAGAGCTGCCAGCGCCGCTCGGCTCCCTCCCTCCCTCCCGGCCCTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS CCA 90 bp GCGCTCTTCCATGCTAGGCTCCCCGCGGCCGCCGCGTCCTGGGGCTaGGTCTGGCTGTCCCGCTCCTCCGCGGCCCGACAACGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: ALFHARLPAAAASWG*VWLSRSSAARQRVS
Trigger: CGAGACGCGTTGTCGGGCCGCGGAGGAGCGGGACAGCCAGACCCAGCCCCAGGACGCGGCGGCCGCGGGGAGCCTAGCATGGAAGAGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553492.5
ENST00000679374.1
CDS GCA 90 bp CAGCATCCCGCCTGCGCCGCAGGCAACCCGGGAGCTGTCCGCGCGTaGGGGGCTTGGAGGCGGACGATTTGGGGGCGTCGAGGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: QHPACAAGNPGAVRA*GAWRRTIWGRRGSA
Trigger: AGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGCTCCCGGGTTGCCTGCGGCGCAGGCGGGATGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp TTCCATGCTAGGCTCCCCGCGGCCGCCGCGTCCTGGGGCTGGGTCTaGCTGTCCCGCTCCTCCGCGGCCCGACAACGCGTCTCGCCTTCG +
Preference number: 5 (lower is better)
Translates to: FHARLPAAAASWGWV*LSRSSAARQRVSPS
Trigger: CGAAGGCGAGACGCGTTGTCGGGCCGCGGAGGAGCGGGACAGCCAGACCCAGCCCCAGGACGCGGCGGCCGCGGGGAGCCTAGCATGGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553492.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGTGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGCSSRN*PLSGLG
Trigger: CCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCA...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGTGGGGCTCCTCCGGGTaGGCCGGAGCTTGCAACTGC +
Preference number: 5 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGWGSSG*AGACNC
Trigger: GCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCA...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 90 bp CGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTGCTTGGGCTCGCCTaGCTGCCGCGCCTCGCAGAGCCTGGTTGGGGCCCACCGTCTCGC +
Preference number: 5 (lower is better)
Translates to: RLQAAGRECRLLGLA*LPRLAEPGWGPPSR
Trigger: GCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp GCCAGGGCTGAAGCTGGGCGGGGGAGGCGACTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAGGCGGTGGTCGGAGAGCGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: ARAEAGRGRRLAQLP*NLVIREAVVGERAG
Trigger: CCCCGCGCGCTCTCCGACCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAGTCGCCTCCCCCGCCCAGCTTCAGCCCTGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp ATGCCGGCTGCTTGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTaGTTGGGGCCCACCGTCTCGCCCAGGTGGCACGGCATAGGCCTC +
Preference number: 5 (lower is better)
Translates to: MPAAWARLPAAPRRA*LGPTVSPRWHGIGL
Trigger: GAGGCCTATGCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp GGAGGCAGAGCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTGCTTaGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGGTTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GGRAAPGSRQRMPAA*ARLPAAPRRAWLGP
Trigger: GGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGCTCTGCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS GCA 90 bp TCCAGGCAGCAGGCAGAGAATGCCGGCTGCTTGGGCTCGCCTGCCTaGCGCGCCTCGCAGAGCCTGGTTGGGGCCCACCGTCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: SRQQAENAGCLGSPA*RASQSLVGAHRLAQ
Trigger: CTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 90 bp ACAGGGAGGCAGAGCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTaGTTGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGGTTGGG +
Preference number: 5 (lower is better)
Translates to: TGRQSGSRQQAENAG*LGSPACRASQSLVG
Trigger: CCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGCTCTGCCTCCCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 90 bp AAGGGCCTGGCAGAGGACTGGACTAGTGCGAAGCAGCATCCCGCCTaGGCCGCAGGCAACCCGGGAGCTGTCCGCGCGTGCGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: KGLAEDWTSAKQHPA*AAGNPGAVRACGAW
Trigger: CCAAGCCCCGCACGCGCGGACAGCTCCCGGGTTGCCTGCGGCGCAGGCGGGATGCTGCTTCGCACTAGTCCAGTCCTCTGCCAGGCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp CGGCCCGCGGGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTGCTTaGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTGCCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: RPAGPRCGSLPPTSA*PCRNLWVSKWLPAG
Trigger: GCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCCCGCGGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 90 bp GCCTGCGCCGCAGGCAACCCGGGAGCTGTCCGCGCGTGCGGGGCTTaGAGGCGGACGATTTGGGGGCGTCGAGGCTCGGCTGACTGTTTA +
Preference number: 5 (lower is better)
Translates to: ACAAGNPGAVRACGA*RRTIWGRRGSADCL
Trigger: TAAACAGTCAGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGCTCCCGGGTTGCCTGCGGCGCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVGWLYG*PENSLP
Trigger: TGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS GCA 90 bp GGGGGCGGTCAGAGGGCGCCGGGAGGGGAGCCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTTGGCAGAGAAGTAGCAATCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GGGQRAPGGEPGLSK*WRVGEVGREVAIPG
Trigger: CCCCGGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCCGGCGCCCTCTGACCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 90 bp CCACCGGCCCGCGGGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTaGTTGGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PPARGPALRLSPSDL*LAVQKPLGFKVAAR
Trigger: GCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCCCGCGGGCCGGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 90 bp GTGGCAGCGGGCCGCGAGGCAGGCTGGCTGGGCGAAAACGGCGTGTaGACCCGGTTCCACTCCTCCCGAAAAGGACCGAGGCTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VAAGREAGWLGENGV*TRFHSSRKGPRLSG
Trigger: GCCGGAAAGCCTCGGTCCTTTTCGGGAGGAGTGGAACCGGGTCCACACGCCGTTTTCGCCCAGCCAGCCTGCCTCGCGGCCCGCTGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 90 bp GCCGCGCCTCGCAGAGCCTGGTTGGGGCCCACCGTCTCGCCCAGGTaGCACGGCATAGGCCTCGCTGGCGAGTTAATAACTCTCGGGGCG +
Preference number: 5 (lower is better)
Translates to: AAPRRAWLGPTVSPR*HGIGLAGELITLGA
Trigger: CGCCCCGAGAGTTATTAACTCGCCAGCGAGGCCTATGCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCGTCGCCACTTTGGGCTaGGAGCCACCGATCACACCC +
Preference number: 5 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVVATLG*EPPITP
Trigger: GGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGAC...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: EAGARGWAALRSALIVCHCVPDT*LPSSGL
Trigger: CAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACA...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTGGTGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: LVEAGTSWAESPSRRRAVPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...GACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCACCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACAGCTTCCTCCCCGGCTaGCTCATGAGGGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: EAGARGWAALRSALIVCHSFLPG*LMREDE
Trigger: CTCATCCTCCCTCATGAGCAAGCCGGGGAGGAAGCT...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS GCA 90 bp GCTCCTCCGGGTTGGCCGGAGCTTGCAACTGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGGCTGGGCGGTCAGCAGAATGGCCCC +
Preference number: 5 (lower is better)
Translates to: APPGWPELATAVAAT*HCRGSGLGGQQNGP
Trigger: GGGGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 90 bp GCGGGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTGCTTGGCCGTaGAGAAACCTTTGGGTTTCAAAGTGGCTGCCCGCGGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: AGPRCGSLPPTSAWP*RNLWVSKWLPAGSQ
Trigger: CTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS-3UTR CAA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRLWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ASPGAGAATSDLACGDRACVPDT*LPSSGL
Trigger: CAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACA...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TGGAGGCCGGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCCAAGTGCTGGCGAGTaGGCGAAGTTGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: WRPGRAGPNPPHGAAQSRPSAGE*AKLAEK
Trigger: CTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGG...CCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCCGGCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GAGGCGGGTGCCCGGGGCTGGGCCGCGCTGCGGTCCGCGCTGATTGTGTGTCACCCAAGTGCTGGCGAGTaGGCGAAGTTGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: EAGARGWAALRSALIVCHPSAGE*AKLAEK
Trigger: CTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGG...GTGACACACAATCAGCGCGGACCGCAGCGCGGCCCAGCCCCGGGCACCCGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 90 bp CGACCTCTGCTTGGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTaGCCGCGGGCAGCCAGGACTCGGCGGACCCCCGGCGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: RPLLGRAETFGFQSG*PRAARTRRTPGGIR
Trigger: GCGGATTCCGCCGGGGGTCCGCCGAGTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS GCA 90 bp GAAGTAGAGCAAGGAAGGCGGATGAGGCAGGGGCCCGGGGTCTGCTaGGCTCAGAGACAGGGAGGCAGAGCGGCTCCAGGCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EVEQGRRMRQGPGVC*AQRQGGRAAPGSRQ
Trigger: CTGCCTGCTGCCTGGAGCCGCTCTGCCTCCCTGTCTCTGAGCGCAGCAGACCCCGGGCCCCTGCCTCATCCGCCTTCCTTGCTCTACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp GGCGGTCAGAGGGCGCCGGGAGGGGAGCCGGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGCAGAGAAGTAGCAATCCCGGGGATG +
Preference number: 5 (lower is better)
Translates to: GGQRAPGGEPGLSKC*RVGEVGREVAIPGM
Trigger: CATCCCCGGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCCGGCGCCCTCTGACCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp ACCTCCACGACCACGCGGAGGAGTGGGGACTGGAAGCACAGACGCTaGGCTGAAGACTGGGGGCTGGGCGAGAGGGCGACTCAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: TSTTTRRSGDWKHRR*AEDWGLGERATQAL
Trigger: CAAGGCCTGAGTCGCCCTCTCGCCCAGCCCCCAGTCTTCAGCCCAGCGTCTGTGCTTCCAGTCCCCACTCCTCCGCGTGGTCGTGGAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp GCGGTGGCCGGGAGGCATCGCGTCGCGTCGGTCCTCCCTCCCTCCGGGGTGGGGTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: AVAGRHRVASVLPPSGVGFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...CCCCACCCCGGAGGGAGGGAGGACCGACGCGACGCGATGCCTCCCGGCCACCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGGGACTCTACGGGGCCGGCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: AGRIYRQGRRATGTLRGRLSKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...CCGGCCCCGTAGAGTCCCTGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCAGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS GCA 90 bp TCTGAAGTAGAGCAAGGAAGGCGGATGAGGCAGGGGCCCGGGGTCTaGTGCGCTCAGAGACAGGGAGGCAGAGCGGCTCCAGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SEVEQGRRMRQGPGV*CAQRQGGRAAPGSR
Trigger: CCTGCTGCCTGGAGCCGCTCTGCCTCCCTGTCTCTGAGCGCAGCAGACCCCGGGCCCCTGCCTCATCCGCCTTCCTTGCTCTACTTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 90 bp GGGAGGGGAGCCGGGCCTCTCCAAGTGCTGGCGAGTTGGCGAAGTTaGCAGAGAAGTAGCAATCCCGGGGATGTCCGAGGTGGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: GRGAGPLQVLASWRS*QRSSNPGDVRGGAC
Trigger: GCAGGCGCCACCTCGGACATCCCCGGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp GAGGGCGCCGGGAGGGGAGCCGGGCCTCTCCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGTAGCAATCCCGGGGATGTCCGAGGT +
Preference number: 5 (lower is better)
Translates to: EGAGRGAGPLQVLAS*RSWQRSSNPGDVRG
Trigger: ACCTCGGACATCCCCGGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCCGGCGCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp AACCCGGGAGCTGTCCGCGCGTGCGGGGCTTGGAGGCGGACGATTTaGGGGCGTCGAGGCTCGGCTGACTGTTTATCCGAGCTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: NPGAVRACGAWRRTI*GRRGSADCLSELLA
Trigger: TGCTAGGAGCTCGGATAAACAGTCAGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGCTCCCGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp GCGAGCCCGGGGGCTGGAGCTGCCACCTCGGATCTAGCCTGCGGAGACAGGGCGGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: ASPGAGAATSDLACGDRAEKGSA*QCISMG
Trigger: CCCCATGGATATGCACTGCAAAGCAGACCCCTTCTC...CGCCCTGTCTCCGCAGGCTAGATCCGAGGTGGCAGCTCCAGCCCCCGGGCTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCTTCGGCCGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: ATTERATTGRDGAARPSAEKGSA*QCISMG
Trigger: CCCCATGGATATGCACTGCAAAGCAGACCCCTTCTC...GGCCGAAGGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGCTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPAVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGACGAGCTGGGCCGAATCCCCCTCACGGCGCCGCGCAGTCCAGGCAGGCGGGTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: GTSWAESPSRRRAVQAGGFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...CCCGCCTGCCTGGACTGCGCGGCGCCGTGAGGGGGATTCGGCCCAGCTCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCTGGCCCCAGGTGGGTaGCGGCTGCGAGAAGACTCG +
Preference number: 5 (lower is better)
Translates to: RKTPVRSLWKLVLRRSRELAPGG*RLREDS
Trigger: CGAGTCTTCTCGCAGCCGCAACCCACCTGGGGCCAG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS GCA 90 bp GGTCCGGATGATTGGTGCATCGCGGAGAAGGGGTCTGCTTTGCAGTaGATATCCATGGGGAGGCAGAGGAGCGGGAGCAGCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GPDDWCIAEKGSALQ*ISMGRQRSGSSAAA
Trigger: GGCGGCCGCGCTGCTCCCGCTCCTCTGCCTCCCCATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCGATGCACCAATCATCCGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554363.2
CDS CCA 90 bp TGCGGCTCTCTCCCTCCGACCTCTGCTTGGCCGTGCAGAAACCTTTaGGTTTCAAAGTGGCTGCCCGCGGGCAGCCAGGACTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: CGSLPPTSAWPCRNL*VSKWLPAGSQDSAD
Trigger: GTCCGCCGAGTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS-3UTR CAA 90 bp GCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGTACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AATLTAQTAGRIYRQGRRYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...CCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACAGTCGCCACTTTGGGCTaGGAGCCACCGATCACACCC +
Preference number: 5 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATVATLG*EPPITP
Trigger: GGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGAC...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TGTCACAGAAACATCCGGCGCGCGCCAGCAGGTCGCGCCCGAGTCCGGCAGGGTCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CHRNIRRAPAGRARVRQGLWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...ACCCTGCCGGACTCGGGCGCGACCTGCTGGCGCGCGCCGGATGTTTCTGTGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCACCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: FHLLGQGTPGRRGQSGWHPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...GTGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGTGGGGCTCCTCCGGGTaGGCCGGAGCTTGCAACTGC +
Preference number: 5 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVWGSSG*AGACNC
Trigger: GCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCA...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGTGGGGCTCCTCCGGGTaGGCCGGAGCTTGCAACTGC +
Preference number: 5 (lower is better)
Translates to: RVRRHAGRIATTERATTGWGSSG*AGACNC
Trigger: GCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCA...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREGWLYG*PENSLQ
Trigger: CTGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS TCA 90 bp AAGGACCGAGGCTTTCCGGCCCGCTCGCCGAGACCCGCGGAGGCCTaGTGCCCTCGGCGCGGCTTTCCTGCGCTTGGAAATTACTTAGAA +
Preference number: 5 (lower is better)
Translates to: KDRGFPARSPRPAEA*CPRRGFPALGNYLE
Trigger: TTCTAAGTAATTTCCAAGCGCAGGAAAGCCGCGCCGAGGGCATCAGGCCTCCGCGGGTCTCGGCGAGCGGGCCGGAAAGCCTCGGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS TCA 90 bp ACGGGCGAAGGAAGCAGGCAGGGCGGAAGGGCATGTTCCCGAGCTTaGGAAGAAAGGTGGTGGACCTCCACGACCACGCGGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: TGEGSRQGGRACSRA*EERWWTSTTTRRSG
Trigger: CCCACTCCTCCGCGTGGTCGTGGAGGTCCACCACCTTTCTTCTCAAGCTCGGGAACATGCCCTTCCGCCCTGCCTGCTTCCTTCGCCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp GAGCGGCGACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCTACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ERRLSQHRQRGVSTGRAGYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...GCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTCGCCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGATCCCACTGGGTCATaGGAGGCGCTGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGDPTGS*EALETG
Trigger: TCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGATC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCGCATCGCCACTACCGAAAGAGCAACTACGGGGCGGGACGGGGCGGCCCGGCCACTCAACTTCAGGACTaGAGGAGAAAAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: AHRHYRKSNYGAGRGGPATQLQD*RRKGRD
Trigger: GTCCCTCCCTTTTCTCCTCAAGTCCTGAAGTTGAGT...GGCCGGGCCGCCCCGTCCCGCCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp TCATGCCAGCGGAAAGGGCGTAAGAAAGCGAGGAGAGGAAGGGCCTaGCAGAGGACTGGACTAGTGCGAAGCAGCATCCCGCCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: SCQRKGRKKARRGRA*QRTGLVRSSIPPAP
Trigger: CGGCGCAGGCGGGATGCTGCTTCGCACTAGTCCAGTCCTCTGCCAGGCCCTTCCTCTCCTCGCTTTCTTACGCCCTTTCCGCTGGCATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp AGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGGGCTGCTGGGCGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: RRSSEEPRVRLDRCGLLGEKGSA*QCISMG
Trigger: CCCCATGGATATGCACTGCAAAGCAGACCCCTTCTC...GCCCAGCAGCCCGCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCTACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HSIFWDRAHPEGEGSPAGYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...GCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGCAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: RVRRHAGRIATTERATTGQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCACAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: AVYGNWSCGGPGRASDGALWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PRVRRHAGRIATTERATTGWLYG*PENSLP
Trigger: TGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACACTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: TLTAQTAGRIYRQGRRATLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...TGTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGGGTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: RVRRHAGRIATTERATTGCVPDT*LPSSGL
Trigger: CAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACA...CCCCGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRGWLYG*PENSLP
Trigger: TGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GACTCTCACAGCACAGACAGCGGGGCGTATCTACAGGCAGGGCCGGCGGGCGACATTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: DSHSTDSGAYLQAGPAGDISKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAT...GTCGCCCGCCGGCCCTGCCTGTAGATACGCCCCGCTGTCTGTGCTGTGAGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427256.6
CDS GCA 90 bp ACTTTGGTCCGGATGATTGGTGCATCGCGGAGAAGGGGTCTGCTTTaGAGTGCATATCCATGGGGAGGCAGAGGAGCGGGAGCAGCGCGG +
Preference number: 5 (lower is better)
Translates to: TLVRMIGASRRRGLL*SAYPWGGRGAGAAR
Trigger: CCGCGCTGCTCCCGCTCCTCTGCCTCCCCATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCGATGCACCAATCATCCGGACCAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554363.2
CDS CCA 90 bp TCTTTGCTGACCCCCTGGCCAGGTTGCTGGCTGCGTGATCCTCAATaGGGAGTCGGCAGTCTAGGCAAGGAGCCTCCAGAGCTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SLLTPWPGCWLRDPQ*GVGSLGKEPPELRA
Trigger: TGCTCTCAGCTCTGGAGGCTCCTTGCCTAGACTGCCGACTCCCCATTGAGGATCACGCAGCCAGCAACCTGGCCAGGGGGTCAGCAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS-3UTR CAA 90 bp ATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTGGCAGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: IPSSGTGHTRKARAVRLAEKGSA*QCISMG
Trigger: CCCCATGGATATGCACTGCAAAGCAGACCCCTTCTC...TGCCAGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGG +
Preference number: 5 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDEKGSA*QCISMG
Trigger: CCCCATGGATATGCACTGCAAAGCAGACCCCTTCTC...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CCCCACTTCCACCCCGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCATACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PHFHPAAAQTPAQNRFLPYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...TGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCGGGGTGGAAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCAGATCCCACTGGGTCATaGGAGGCGCTGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPDPTGS*EALETG
Trigger: TCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGATC...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATGGGGCTGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AVYGNWSCGGPGRASDGAADRLD*TSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGC...AGCCCCATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: RKTPVRSLWKLVLRRSREFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...CTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGTCAGACGGGGACGATGTGGAGGCCGAAGCTGTCGGCCTGAAGCTTGATGTGCTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: GSDGDDVEAEAVGLKLDVLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...CACATCAAGCTTCAGGCCGACAGCTTCGGCCTCCACATCGTCCCCGTCTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCACTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGGGAGGGGGTACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRTGSYHRQIESLCRGRGYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...CCCCCTCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTTCGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCGTCGCCACTTTGGGCTaGGAGCCACCGATCACACCC +
Preference number: 5 (lower is better)
Translates to: FRLHTTHTVFPQSSSLVGVATLG*EPPITP
Trigger: GGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGAC...GCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGCTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RARRGERSGRGLQAFSDLLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...CAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGACTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTGATCCCACTGGGTCATaGGAGGCGCTGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRDPTGS*EALETG
Trigger: TCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGATC...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCCCATTCCATCTTCTGGGACAGGGCACACCCGGAAGGCGAGGGCAGTCCGGCTTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: PHSIFWDRAHPEGEGSPAFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...AGCCGGACTGCCCTCGCCTTCCGGGTGTGCCCTGTCCCAGAAGATGGAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGGRPQSAVYGNWSCGGPADRLD*TSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGC...GGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGCAGCAGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGATGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: RSSSDASSEPVLTTGRLRCVPDT*LPSSGL
Trigger: CAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACA...TCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCTGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: RNYRERANKTGQRSPQDHGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCTGGCCCCAGGTGGGTaGCGGCTGCGAGAAGACTCG +
Preference number: 5 (lower is better)
Translates to: RQRALPPAESRFLLNLLGLAPGG*RLREDS
Trigger: CGAGTCTTCTCGCAGCCGCAACCCACCTGGGGCCAG...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355243.8
ENST00000427256.6
CDS-3UTR CAA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCTGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVCSSRN*PLSGLG
Trigger: CCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCA...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGTGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLCSSRN*PLSGLG
Trigger: CCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCA...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGGTCGCCACTTTGGGCTaGGAGCCACCGATCACACCC +
Preference number: 5 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLVATLG*EPPITP
Trigger: GGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGAC...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTCCCGGGAGAGCGTCCGATTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: QSAVYGNWSCGGPGRASDFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...ATCGGACGCTCTCCCGGGACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFCVPDT*LPSSGL
Trigger: CAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACA...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQGWLYG*PENSLP
Trigger: TGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRLSKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAATGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQCSSRN*PLSGLG
Trigger: CCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCA...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp ACTAGGCAGGCCAGGAGGAGCAGTGAAGAGCCGAGAGTCCGGCTCGATCGGTGCGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: TRQARRSSEEPRVRLDRCVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...GCACCGATCGAGCCGGACTCTCGGCTCTTCACTGCTCCTCCTGGCCTGCCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAACAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTACCGAAAGAGCAACTACGGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PRVRRHAGRIATTERATTADRLD*TSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGC...CGTAGTTGCTCTTTCGGTAGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCGGGTGGCTGTACGGGTaGCCGGAGAACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVGWLYG*PENSLP
Trigger: TGGGAGCGAGTTCTCCGGCAACCCGTACAGCCACCC...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTGGCTTCGGGGCTGGCTaGGTGGAGGCCGGGACGAGC +
Preference number: 5 (lower is better)
Translates to: QNRPEESTGPCSSFCIEIGFGAG*VEAGTS
Trigger: GCTCGTCCCGGCCTCCACCAAGCCAGCCCCGAAGCC...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCGCCACTTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: ISSRHDPRVRRHAGRIATFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...AGTGGCGATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AAGGGCTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTCTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: KGSQGREIWARTPSLFGFLTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...AAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS GCA 90 bp TCCAAAGCTTCCAGCTGCTGCTGGGTGAAGGTGTCAGCTCGCAAGTaGTTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATTGGGG +
Preference number: 5 (lower is better)
Translates to: SKASSCCWVKVSARK*FRKLSTPLWESPLG
Trigger: CCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000553492.5
ENST00000554172.2
ENST00000554363.2
ENST00000679374.1
CDS-3UTR CAA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTGTCGCCACTTTGGGCTaGGAGCCACCGATCACACCC +
Preference number: 5 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVVATLG*EPPITP
Trigger: GGGTGTGATCGGTGGCTCCAAGCCCAAAGTGGCGAC...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACCTTGGAAAGACCTGACGCCCCCAAAGCCCGTTCCTAGAGCCGGACCCCCAGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: QPWKDLTPPKPVPRAGPPVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...TGGGGGTCCGGCTCTAGGAACGGGCTTTGGGGGCGTCAGGTCTTTCCAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: FCYFESSRSTGEETCRAHLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTCAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTGCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: PSHDTHRLSTKQQPGGLLLWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...CAAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVLWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACTGCTGGAGGAAGACCCCAGTCCGCAGTCTATGGAAACTGGTCCTGCGGCGGTACTCAACTTCAGGACTaGAGGAGAAAAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: TAGGRPQSAVYGNWSCGGTQLQD*RRKGRD
Trigger: GTCCCTCCCTTTTCTCCTCAAGTCCTGAAGTTGAGT...ACCGCCGCAGGACCAGTTTCCATAGACTGCGGACTGGGGTCTTCCTCCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp GCAAGTGCTTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACACATCATTGGAGCGAGGAATCCCCA +
Preference number: 5 (lower is better)
Translates to: ASASANCPHHSGNLH*GLSPQTHHWSEESP
Trigger: TGGGGATTCCTCGCTCCAATGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATTACCTGCCCAGGATTTaGCTGACACAGCCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: FCYFESSRSTGEETCRAHYLPRI*LTQPWL
Trigger: CAGCCACGGCTGTGTCAGCAAAATCCTGGGCAGGTA...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAGGGGGAGGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RRGRGYVHRVSPSHDTHRVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...ACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCCTCCCCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCCTGGGCACTGTGTCATaGTCACAGATGCCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVLGTVS*SQMPSA
Trigger: GGCCGAGGGCATCTGTGACAATGACACAGTGCCCAG...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTGATCCCACTGGGTCATaGGAGGCGCTGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPDPTGS*EALETG
Trigger: TCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGATC...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGAGATCCCACTGGGTCATaGGAGGCGCTGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: QGREIWARTPSLFGFVQGDPTGS*EALETG
Trigger: TCCTGTTTCCAGCGCCTCCAATGACCCAGTGGGATC...TCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTCTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPLWESP*GTEPSD
Trigger: GTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAG...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CTCGCAGGGGAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCACTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: LAGERDLGEDSKPFRICSLSKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...TGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTCCCCTGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATCCAAGTGCTGGCGAGTaGGCGAAGTTGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: FCYFESSRSTGEETCRAHPSAGE*AKLAEK
Trigger: CTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGG...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp AAAACACGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGTGGGGCTCCTCCGGGTaGGCCGGAGCTTGCAACTGC +
Preference number: 5 (lower is better)
Translates to: KTRNYRERANKTGQRSPQWGSSG*AGACNC
Trigger: GCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCA...CTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp ACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCACTCGCTCCAGTGGGTaGCACACAAGGGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: TEKEPTKQARGVHRTMFVTRSSG*HTRGHF
Trigger: GAAGTGCCCCCTTGTGTGCAACCCACTGGAGCGAGT...GACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS CCA 90 bp AAGGTGTCAGCTCGCAAGTGCTTCCGCAAACTGTCCACACCACTCTaGGAATCTCCATTGGGGACTGAGCCCTCAGACACATCATTGGAG +
Preference number: 5 (lower is better)
Translates to: KVSARKCFRKLSTPL*ESPLGTEPSDTSLE
Trigger: CTCCAATGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS-3UTR CAA 90 bp CGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RQRALPPAESRFLLNLLGVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...GCCAAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCAGGGCGCATGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FCYFESSRSTGEETCRAHVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...ATGCGCCCTGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTACTCAACTTCAGGACTaGAGGAGAAAAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: RLHTTHTVFPQSSSLVGFTQLQD*RRKGRD
Trigger: GTCCCTCCCTTTTCTCCTCAAGTCCTGAAGTTGAGT...AAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GCCTTCACACGACACACACCGTCTTTCCACAAAGCAGCAGCCTGGTGGGCTTTTTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: AFTRHTPSFHKAAAWWAFFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...AAAAGCCCACCAGGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp TCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCTTCCCCTGTTCTGATTaGATGTGCTCTGATGCCTGG +
Preference number: 5 (lower is better)
Translates to: SDASSEPVLTTGRLRVCVFPCSD*MCSDAW
Trigger: CCAGGCATCAGAGCACATCAAATCAGAACAGGGGAA...GACACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGGGTTATGTACACCGGGTTTCGCCTTCACACGACACACACCGTCTTTCCACAAGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GVMYTGFRLHTTHTVFPQADRLD*TSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGC...TTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCGGTGTACATAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GAGAGAGATCTGGGCGAGGACTCCAAGCCTTTTCGGATTTGTTCAAGGATTTTTCCTTGGGTCCCAACCTaGGAAAGACCTGACGCCCCC +
Preference number: 5 (lower is better)
Translates to: ERDLGEDSKPFRICSRIFPWVPT*ERPDAP
Trigger: GGGGGCGTCAGGTCTTTCCAAGGTTGGGACCCAAGG...AAAAATCCTTGAACAAATCCGAAAAGGCTTGGAGTCCTCGCCCAGATCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTACTCAACTTCAGGACTaGAGGAGAAAAGGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCTQLQD*RRKGRD
Trigger: GTCCCTCCCTTTTCTCCTCAAGTCCTGAAGTTGAGT...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 90 bp GCAAGTGCTTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATTaGGGACTGAGCCCTCAGACACATCTTCATCACGTTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASASANCPHHSGNLH*GLSPQTHLHHVSSS
Trigger: AGAAGAGGAAACGTGATGAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000553492.5
ENST00000554363.2
ENST00000679374.1
CDS CCA 90 bp AAGGTGTCAGCTCGCAAGTGCTTCCGCAAACTGTCCACACCACTCTaGGAATCTCCATTGGGGACTGAGCCCTCAGACACATCTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KVSARKCFRKLSTPL*ESPLGTEPSDTSLK
Trigger: TTTAAGAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCGAGCTGACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS-3UTR CAA 90 bp AGCTCAGACGCCAGCTCAGAACCGGTTCTTACCACCGGCAGATTGAGAGTCTGTGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SSDASSEPVLTTGRLRVCVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...ACAGACTCTCAATCTGCCGGTGGTAAGAACCGGTTCTGAGCTGGCGTCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp AAGAATTTTTCCCAGGGATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: KNFSQGFGSGLFLLQKVVADRLD*TSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGC...AACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAATCCCTGGGAAAAATTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCACCAAGTGCTGGCGAGTaGGCGAAGTTGGCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAPSAGE*AKLAEK
Trigger: CTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGG...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS-3UTR CAA 90 bp GCAGAAAGTCGTTTTCTTCTTAATCTCCTTGGCCCAGCCCCTCCAGCGAAGCCTGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AESRFLLNLLGPAPPAKPVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...AGGCTTCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAAAACGACTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QQNRPEESTGPCSSFCIEVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: IRQRALPPAESRFLLNLLLSKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGCTTAGTAAGGCGGGGTaGCTGAATCTCCAAGCCTCG +
Preference number: 5 (lower is better)
Translates to: QQNRPEESTGPCSSFCIELSKAG*LNLQAS
Trigger: CGAGGCTTGGAGATTCAGCAACCCCGCCTTACTAAG...CTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GACTTTGTTTCTGTTATTTCGAGTCGTCACGATCCACGGGTGAGGAGACATGCATTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: DFVSVISSRHDPRVRRHAFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...TGCATGTCTCCTCACCCGTGGATCGTGACGACTCGAAATAACAGAAACAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ATTCGGCAGCGGGCTCTTCCTCCTGCAGAAAGTCGTTTTCTTCTTAATCTCCTTTTCTTCTTAATCTCCTaGGCCCAGCCCCTCCAGCGA +
Preference number: 5 (lower is better)
Translates to: IRQRALPPAESRFLLNLLFFLIS*AQPLQR
Trigger: TCGCTGGAGGGGCTGGGCCAAGGAGATTAAGAAGAA...AAGGAGATTAAGAAGAAAACGACTTTCTGCAGGAGGAAGAGCCCGCTGCCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTCTTACCACCGGCAGATaGAGAGTCTGTGTCGGGGGA +
Preference number: 5 (lower is better)
Translates to: QNRPEESTGPCSSFCIEILTTGR*RVCVGG
Trigger: TCCCCCGACACAGACTCTCAATCTGCCGGTGGTAAG...AATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp ACAAAACAGGCCAGAGGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TKQARGVHRTMFVILHRDVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...ATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCCTCTGGCCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTACAGCCCCATCCGGCGTaGGGTGGAAAGGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVQPHPA*GGKAAE
Trigger: TTCAGCAGCCTTTCCACCCAACGCCGGATGGGGCTG...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS-3UTR CAA 90 bp CGGAATTACAGAGAAAGAGCCAACAAAACAGGCCAGAGGAGTCCACAGGACCATGTCGGGTTCTGTCGTTaGTATTCAGCAATCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RNYRERANKTGQRSPQDHVGFCR*YSAILS
Trigger: GGACAAGATTGCTGAATACAAACGACAGAACCCGAC...ATGGTCCTGTGGACTCCTCTGGCCTGTTTTGTTGGCTCTTTCTCTGTAATTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS CCA 90 bp TCTCTTAAAGTCCAGACCAGATGCAAACCTCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACCTCAACTTCATCACGTTTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLKVQTRCKPPPPLM*AGSVYTSTSSRFLF
Trigger: GAAGAGGAAACGTGATGAAGTTGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTGCATCTGGTCTGGACTTTAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS-3UTR CAA 90 bp GGAGTCCACAGGACCATGTTCGTCATTTTGCATAGAGATTTCTTTTCTTTCGTAGTCCGGATGATTCTGTaGATGGAAGAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GVHRTMFVILHRDFFSFVVRMIL*MEETLG
Trigger: GCCCAGCGTCTCTTCCATCAACAGAATCATCCGGAC...TACGAAAGAAAAGAAATCTCTATGCAAAATGACGAACATGGTCCTGTGGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS CCA 90 bp GTAACATCATGTCAACTTTCTTTCTTTAATTTCCTTTCCCGTGTTTaGATTTCTCTTTTCCTTTCTCCTCAGCTTTGGCATTTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: VTSCQLSFFNFLSRV*ISLFLSPQLWHLLS
Trigger: GGAAAGCAAATGCCAAAGCTGAGGAGAAAGGAAAAGAGAAATCCAAACACGGGAAAGGAAATTAAAGAAAGAAAGTTGACATGATGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp GCTTGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTaGTTGGGGCCCACCGTCTCGCCCAGGTGGCACGGC +
Preference number: 6 (lower is better)
Translates to: AWARLPAAPRRA*LGPTVSPRWHG
Trigger: GCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp GCCTGCGCCGCAGGCAACCCGGGAGCTGTCCGCGCGTaGGGGGCTTGGAGGCGGACGATTTGGGGGCGTCGA +
Preference number: 6 (lower is better)
Translates to: ACAAGNPGAVRA*GAWRRTIWGRR
Trigger: TCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGCTCCCGGGTTGCCTGCGGCGCAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp CCGGCTGCTTGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGGTaGGGGCCCACCGTCTCGCCCAGGTGGCACGGCATAGGCCTCGCT +
Preference number: 6 (lower is better)
Translates to: PAAWARLPAAPRRAW*GPTVSPRWHGIGLA
Trigger: AGCGAGGCCTATGCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 72 bp GGCGGGGGAGGCGACTCGCTCAGCTCCCCTGGAACCTaGTCATCCGAGAGGCGGTGGTCGGAGAGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: GGGGDSLSSPGT*SSERRWSESAR
Trigger: CCGCGCGCTCTCCGACCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAGTCGCCTCCCCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp GCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTGCTTaGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: AAPGSRQRMPAA*ARLPAAPRRAW
Trigger: CCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 72 bp GCAGGCAACCCGGGAGCTGTCCGCGCGTGCGGGGCTTaGAGGCGGACGATTTGGGGGCGTCGAGGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: AGNPGAVRACGA*RRTIWGRRGSA
Trigger: AGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGCTCCCGGGTTGCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 72 bp TGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGGTaGGGGCCCACCGTCTCGCCCAGGTGGCACGGCATA +
Preference number: 6 (lower is better)
Translates to: WARLPAAPRRAW*GPTVSPRWHGI
Trigger: TATGCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp GGGAGGCAGAGCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTGCTaGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTGGTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: GRQSGSRQQAENAGC*GSPACRASQSLVGA
Trigger: GGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGCTCTGCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp CAGGCAGAGAATGCCGGCTGCTTGGGCTCGCCTGCCTaGCGCGCCTCGCAGAGCCTGGTTGGGGCCCACCGT +
Preference number: 6 (lower is better)
Translates to: QAENAGCLGSPA*RASQSLVGAHR
Trigger: ACGGTGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp GCAGCAGGCAGAGAATGCCGGCTGCTTGGGCTCGCCTaGCTGCCGCGCCTCGCAGAGCCTGGTTGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: AAGRECRLLGLA*LPRLAEPGWGP
Trigger: TGGGCCCCAACCAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp CAGAGCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTaGTTGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QSGSRQQAENAG*LGSPACRASQS
Trigger: GCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGCTCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 72 bp AGCGGCTCCAGGCAGCAGGCAGAGAATGCCGGCTGCTaGGGCTCGCCTGCCTGCCGCGCCTCGCAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: SGSRQQAENAGC*GSPACRASQSL
Trigger: CAGGCTCTGCGAGGCGCGGCAGGCAGGCGAGCCCAAGCAGCCGGCATTCTCTGCCTGCTGCCTGGAGCCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp CCGGCCCGCGGGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTGCTaGGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTGCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: PARGPALRLSPSDLC*AVQKPLGFKVAARG
Trigger: CCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCCCGCGGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS TCA 72 bp GGCTTTCCGGCCCGCTCGCCGAGACCCGCGGAGGCCTaGTGCCCTCGGCGCGGCTTTCCTGCGCTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: GFPARSPRPAEA*CPRRGFPALGN
Trigger: ATTTCCAAGCGCAGGAAAGCCGCGCCGAGGGCATCAGGCCTCCGCGGGTCTCGGCGAGCGGGCCGGAAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS GCA 72 bp GCAGAGGACTGGACTAGTGCGAAGCAGCATCCCGCCTaGGCCGCAGGCAACCCGGGAGCTGTCCGCGCGTGC +
Preference number: 6 (lower is better)
Translates to: AEDWTSAKQHPA*AAGNPGAVRAC
Trigger: GCACGCGCGGACAGCTCCCGGGTTGCCTGCGGCGCAGGCGGGATGCTGCTTCGCACTAGTCCAGTCCTCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 72 bp CGAGAGCTGTGGCAGCGGGCCGCGAGGCAGGCTGGCTaGGCGAAAACGGCGTGTGGACCCGGTTCCACTCCT +
Preference number: 6 (lower is better)
Translates to: RELWQRAARQAG*AKTACGPGSTP
Trigger: AGGAGTGGAACCGGGTCCACACGCCGTTTTCGCCCAGCCAGCCTGCCTCGCGGCCCGCTGCCACAGCTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CAA 90 bp GGCTCCTCCGGGTTGGCCGGAGCTTGCAACTGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGGGCTGGGCGGTCAGCAGAATGGCCC +
Preference number: 6 (lower is better)
Translates to: GSSGLAGACNCSSRN*PLSGLGAGRSAEWP
Trigger: GGGCCATTCTGCTGACCGCCCAGCCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 72 bp CGCTGGGGCTCCTCCGGGTTGGCCGGAGCTTGCAACTaGAGTAGCCGCAACTTGCCACTGTCGGGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: RWGSSGLAGACN*SSRNLPLSGLG
Trigger: CCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 72 bp GCTCCCCGCTGGGGCTCCTCCGGGTTGGCCGGAGCTTaGAACTGCAGTAGCCGCAACTTGCCACTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: APRWGSSGLAGA*NCSSRNLPLSG
Trigger: CCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCAGCGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp GAAGCTGGGCGGGGGAGGCGACTCGCTCAGCTCCCCTaGAACCTGGTCATCCGAGAGGCGGTGGTCGGAGAG +
Preference number: 6 (lower is better)
Translates to: EAGRGRRLAQLP*NLVIREAVVGE
Trigger: CTCTCCGACCACCGCCTCTCGGATGACCAGGTTCCAGGGGAGCTGAGCGAGTCGCCTCCCCCGCCCAGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp CGCAGCACTGCGCTCCCCGCTGGGGCTCCTCCGGGTTaGCCGGAGCTTGCAACTGCAGTAGCCGCAACTTGC +
Preference number: 6 (lower is better)
Translates to: RSTALPAGAPPG*PELATAVAATC
Trigger: GCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCCGGAGGAGCCCCAGCGGGGAGCGCAGTGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp GGCCGCGAGGCAGGCTGGCTGGGCGAAAACGGCGTGTaGACCCGGTTCCACTCCTCCCGAAAAGGACCGAGG +
Preference number: 6 (lower is better)
Translates to: GREAGWLGENGV*TRFHSSRKGPR
Trigger: CCTCGGTCCTTTTCGGGAGGAGTGGAACCGGGTCCACACGCCGTTTTCGCCCAGCCAGCCTGCCTCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp AGAACGAGAGCTGTGGCAGCGGGCCGCGAGGCAGGCTaGCTGGGCGAAAACGGCGTGTGGACCCGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: RTRAVAAGREAG*LGENGVWTRFH
Trigger: GTGGAACCGGGTCCACACGCCGTTTTCGCCCAGCCAGCCTGCCTCGCGGCCCGCTGCCACAGCTCTCGTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS GCA 72 bp GGTTGGCCGGAGCTTGCAACTGCAGTAGCCGCAACTTaGCACTGTCGGGGCTCGGGGCTGGGCGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GWPELATAVAAT*HCRGSGLGGQQ
Trigger: CTGCTGACCGCCCAGCCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 72 bp CTTGGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTaGCCGCGGGCAGCCAGGACTCGGCGGACCCCCGGC +
Preference number: 6 (lower is better)
Translates to: LGRAETFGFQSG*PRAARTRRTPG
Trigger: GCCGGGGGTCCGCCGAGTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp GCTGTCCGCGCGTGCGGGGCTTGGAGGCGGACGATTTaGGGGCGTCGAGGCTCGGCTGACTGTTTATCCGAG +
Preference number: 6 (lower is better)
Translates to: AVRACGAWRRTI*GRRGSADCLSE
Trigger: CTCGGATAAACAGTCAGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAAGCCCCGCACGCGCGGACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 72 bp GGGTTGGCCGGAGCTTGCAACTGCAGTAGCCGCAACTaGCCACTGTCGGGGCTCGGGGCTGGGCGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GLAGACNCSSRN*PLSGLGAGRSA
Trigger: TGCTGACCGCCCAGCCCCGAGCCCCGACAGTGGCAAGTTGCGGCTACTGCAGTTGCAAGCTCCGGCCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS GCA 72 bp CGGGTTGCCGGAGAACTCGCTCCCAGGCACCATTCCTaGCAGGGTGGAGGTGGGGTAGCTTCCCTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: RVAGELAPRHHS*QGGGGVASLAS
Trigger: ACTGGCCAGGGAAGCTACCCCACCTCCACCCTGGCAGGAATGGTGCCTGGGAGCGAGTTCTCCGGCAACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS GCA 72 bp CAGAGGGCGCCGGGAGGGGAGCCGGGCCTCTCCAAGTaGTGGCGAGTTGGCGAAGTTGGCAGAGAAGTAGCA +
Preference number: 6 (lower is better)
Translates to: QRAPGGEPGLSK*WRVGEVGREVA
Trigger: TGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCCGGCGCCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp TGGTGGACCTCCACGACCACGCGGAGGAGTGGGGACTaGAAGCACAGACGCTGGGCTGAAGACTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: WWTSTTTRRSGD*KHRRWAEDWGL
Trigger: CAGCCCCCAGTCTTCAGCCCAGCGTCTGTGCTTCCAGTCCCCACTCCTCCGCGTGGTCGTGGAGGTCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp CTGCGGCTCTCTCCCTCCGACCTCTGCTTGGCCGTGCAGAAACCTTaGGGTTTCAAAGTGGCTGCCCGCGGGCAGCCAGGACTCGGCGGA +
Preference number: 6 (lower is better)
Translates to: LRLSPSDLCLAVQKP*GFKVAARGQPGLGG
Trigger: TCCGCCGAGTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp AGGGCGCCGGGAGGGGAGCCGGGCCTCTCCAAGTGCTaGCGAGTTGGCGAAGTTGGCAGAGAAGTAGCAATC +
Preference number: 6 (lower is better)
Translates to: RAPGGEPGLSKC*RVGEVGREVAI
Trigger: GATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCCGGCGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp TCTGCTTGGCCGTGCAGAAACCTTTGGGTTTCAAAGTaGCTGCCCGCGGGCAGCCAGGACTCGGCGGACCCC +
Preference number: 6 (lower is better)
Translates to: SAWPCRNLWVSK*LPAGSQDSADP
Trigger: GGGGTCCGCCGAGTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp CGCAGAGCCTGGTTGGGGCCCACCGTCTCGCCCAGGTaGCACGGCATAGGCCTCGCTGGCGAGTTAATAACT +
Preference number: 6 (lower is better)
Translates to: RRAWLGPTVSPR*HGIGLAGELIT
Trigger: AGTTATTAACTCGCCAGCGAGGCCTATGCCGTGCCACCTGGGCGAGACGGTGGGCCCCAACCAGGCTCTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS TCA 72 bp GGAAGCAGGCAGGGCGGAAGGGCATGTTCCCGAGCTTaGGAAGAAAGGTGGTGGACCTCCACGACCACGCGG +
Preference number: 6 (lower is better)
Translates to: GSRQGGRACSRA*EERWWTSTTTR
Trigger: CCGCGTGGTCGTGGAGGTCCACCACCTTTCTTCTCAAGCTCGGGAACATGCCCTTCCGCCCTGCCTGCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp CGCTGCGGCTCTCTCCCTCCGACCTCTGCTTGGCCGTaGAGAAACCTTTGGGTTTCAAAGTGGCTGCCCGCG +
Preference number: 6 (lower is better)
Translates to: RCGSLPPTSAWP*RNLWVSKWLPA
Trigger: CGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp GGGAGGGGAGCCGGGCCTCTCCAAGTGCTGGCGAGTTaGCGAAGTTGGCAGAGAAGTAGCAATCCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: GRGAGPLQVLAS*RSWQRSSNPGD
Trigger: ATCCCCGGGATTGCTACTTCTCTGCCAACTTCGCCAACTCGCCAGCACTTGGAGAGGCCCGGCTCCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355243.8
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
CDS CCA 72 bp ACCCCCTGGCCAGGTTGCTGGCTGCGTGATCCTCAATaGGGAGTCGGCAGTCTAGGCAAGGAGCCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: TPWPGCWLRDPQ*GVGSLGKEPPE
Trigger: CTCTGGAGGCTCCTTGCCTAGACTGCCGACTCCCCATTGAGGATCACGCAGCCAGCAACCTGGCCAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp CTCCCTCCGACCTCTGCTTGGCCGTGCAGAAACCTTTaGGTTTCAAAGTGGCTGCCCGCGGGCAGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: LPPTSAWPCRNL*VSKWLPAGSQD
Trigger: GTCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CCA 72 bp GGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTGCTTaGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCTG +
Preference number: 6 (lower is better)
Translates to: GPRCGSLPPTSA*PCRNLWVSKWL
Trigger: CAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CAA 72 bp GGGCCCGCGCTGCGGCTCTCTCCCTCCGACCTCTGCTaGGCCGTGCAGAAACCTTTGGGTTTCAAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: GPALRLSPSDLC*AVQKPLGFKVA
Trigger: AGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGAGAGCCGCAGCGCGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS CAA 90 bp GTGGGTTGCACACAAGGGGGCACTTCTGCAAGCTTCCTCCCCGGCTaGCTCATGAGGGAGGATGAGGGACCAACTGCAGCCTCAGGCACC +
Preference number: 6 (lower is better)
Translates to: VGCTQGGTSASFLPG*LMREDEGPTAASGT
Trigger: GGTGCCTGAGGCTGCAGTTGGTCCCTCATCCTCCCTCATGAGCAAGCCGGGGAGGAAGCTTGCAGAAGTGCCCCCTTGTGTGCAACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS CAA 72 bp TCTCCCTCCGACCTCTGCTTGGCCGTGCAGAAACCTTaGGGTTTCAAAGTGGCTGCCCGCGGGCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SPSDLCLAVQKP*GFKVAARGQPG
Trigger: TCCTGGCTGCCCGCGGGCAGCCACTTTGAAACCCAAAGGTTTCTGCACGGCCAAGCAGAGGTCGGAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS TCA 72 bp CTCTTTGCTGACCCCCTGGCCAGGTTGCTGGCTGCGTaGTCCTCAATGGGGAGTCGGCAGTCTAGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: LFADPLARLLAA*SSMGSRQSRQG
Trigger: TCCTTGCCTAGACTGCCGACTCCCCATTGAGGATCACGCAGCCAGCAACCTGGCCAGGGGGTCAGCAAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483202.2
CDS TCA 72 bp TTGGAGGCGGACGATTTGGGGGCGTCGAGGCTCGGCTaGCTGTTTATCCGAGCTCCTAGCACAGACAGGGGA +
Preference number: 6 (lower is better)
Translates to: LEADDLGASRLG*LFIRAPSTDRG
Trigger: TCCCCTGTCTGTGCTAGGAGCTCGGATAAACAGTCAGCCGAGCCTCGACGCCCCCAAATCGTCCGCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp ACTCGCTCCAGTGGGTTGCACACAAGGGGGCACTTCTaGAAGCTTCCTCCCCGGCTTGCTCATGAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: TRSSGLHTRGHF*KLPPRLAHEGG
Trigger: TCCTCCCTCATGAGCAAGCCGGGGAGGAAGCTTGCAGAAGTGCCCCCTTGTGTGCAACCCACTGGAGCGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370296.6
CDS CCA 72 bp CGGAAAGGGCGTAAGAAAGCGAGGAGAGGAAGGGCCTaGCAGAGGACTGGACTAGTGCGAAGCAGCATCCCG +
Preference number: 6 (lower is better)
Translates to: RKGRKKARRGRA*QRTGLVRSSIP
Trigger: CGGGATGCTGCTTCGCACTAGTCCAGTCCTCTGCCAGGCCCTTCCTCTCCTCGCTTTCTTACGCCCTTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp AACTTTGGTCCGGATGATTGGTGCATCGCGGAGAAGGGGTCTGCTTaGCAGTGCATATCCATGGGGAGGCAGAGGAGCGGGAGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: NFGPDDWCIAEKGSA*QCISMGRQRSGSSA
Trigger: CGCGCTGCTCCCGCTCCTCTGCCTCCCCATGGATATGCACTGCAAAGCAGACCCCTTCTCCGCGATGCACCAATCATCCGGACCAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554363.2
CDS CAA 90 bp ACGTTGCTGCCCAGCTCAGGGTTGGTGGATGCAGATAGACTCGACTaGACTTCATCAAGCCCAGGGGTCAGGGCTGGGAGGGAGTACTCG +
Preference number: 6 (lower is better)
Translates to: TLLPSSGLVDADRLD*TSSSPGVRAGREYS
Trigger: CGAGTACTCCCTCCCAGCCCTGACCCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000554172.2
ENST00000679374.1
CDS TCA 72 bp GTCACGACCAGTCACAACTGGGTATGTCTGTGTGCCTaGCACGTTGCTGCCCAGCTCAGGGTTGGTGGATGC +
Preference number: 6 (lower is better)
Translates to: VTTSHNWVCLCA*HVAAQLRVGGC
Trigger: GCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGTTGTGACTGGTCGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS CAA 90 bp CGCAAGTGCTTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGACACATCATTGGAGCGAGGAATCCCC +
Preference number: 6 (lower is better)
Translates to: RKCFRKLSTPLWESP*GTEPSDTSLERGIP
Trigger: GGGGATTCCTCGCTCCAATGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CCA 72 bp GCTCGCAAGTGCTTCCGCAAACTGTCCACACCACTCTaGGAATCTCCATTGGGGACTGAGCCCTCAGACACA +
Preference number: 6 (lower is better)
Translates to: ARKCFRKLSTPL*ESPLGTEPSDT
Trigger: TGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000553492.5
ENST00000554172.2
ENST00000554363.2
ENST00000679374.1
CDS CAA 90 bp ACTGGGTATGTCTGTGTGCCTGACACGTTGCTGCCCAGCTCAGGGTaGGTGGATGCAGATAGACTCGACTTGACTTCATCAAGCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TGYVCVPDTLLPSSG*VDADRLDLTSSSPG
Trigger: CCCTGGGCTTGATGAAGTCAAGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000554172.2
ENST00000679374.1
CDS TCA 72 bp CAAAGACCCGATCCAAAGCTTCCAGCTGCTGCTGGGTaGAGGTGTCAGCTCGCAAGTGCTTCCGCAAACTGT +
Preference number: 6 (lower is better)
Translates to: QRPDPKLPAAAG*RCQLASASANC
Trigger: ACAGTTTGCGGAAGCACTTGCGAGCTGACACCTTCACCCAGCAGCAGCTGGAAGCTTTGGATCGGGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000553492.5
ENST00000554172.2
ENST00000554363.2
ENST00000679374.1
CDS TCA 72 bp ACTGTCCACACCACTCTGGGAATCTCCATTGGGGACTaGGCCCTCAGACACATCATTGGAGCGAGGAATCCC +
Preference number: 6 (lower is better)
Translates to: TVHTTLGISIGD*ALRHIIGARNP
Trigger: GGGATTCCTCGCTCCAATGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS GCA 72 bp TCACAACTGGGTATGTCTGTGTGCCTGACACGTTGCTaGCCAGCTCAGGGTTGGTGGATGCAGATAGACTCG +
Preference number: 6 (lower is better)
Translates to: SQLGMSVCLTRC*PAQGWWMQIDS
Trigger: CGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000554172.2
ENST00000679374.1
CDS GCA 72 bp CAGTCACAACTGGGTATGTCTGTGTGCCTGACACGTTaGTGCCCAGCTCAGGGTTGGTGGATGCAGATAGAC +
Preference number: 6 (lower is better)
Translates to: QSQLGMSVCLTR*CPAQGWWMQID
Trigger: GTCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGTTGTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000554172.2
ENST00000679374.1
CDS CAA 72 bp CCAGTCACAACTGGGTATGTCTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTGGTGGATGCAGATAGA +
Preference number: 6 (lower is better)
Translates to: PVTTGYVCVPDT*LPSSGLVDADR
Trigger: TCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGTTGTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000554172.2
ENST00000679374.1
CDS CAA 90 bp ATGTCACGACCAGTCACAACTGGGTATGTCTGTGTGCCTGACACGTaGCTGCCCAGCTCAGGGTTGGTGGATGCAGATAGACTCGACTTG +
Preference number: 6 (lower is better)
Translates to: MSRPVTTGYVCVPDT*LPSSGLVDADRLDL
Trigger: CAAGTCGAGTCTATCTGCATCCACCAACCCTGAGCTGGGCAGCAACGTGTCAGGCACACAGACATACCCAGTTGTGACTGGTCGTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000428433.5
ENST00000679374.1
CDS CAA 72 bp TTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGACACATCATTGGAGCGA +
Preference number: 6 (lower is better)
Translates to: FRKLSTPLWESP*GTEPSDTSLER
Trigger: TCGCTCCAATGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554172.2
CDS CAA 90 bp CGCAAGTGCTTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGACACATCTTCATCACGTTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: RKCFRKLSTPLWESP*GTEPSDTSSSRFLF
Trigger: GAAGAGGAAACGTGATGAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAAGCACTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000553492.5
ENST00000554363.2
ENST00000679374.1
CDS TCA 72 bp ACTGTCCACACCACTCTGGGAATCTCCATTGGGGACTaGGCCCTCAGACACATCTTCATCACGTTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: TVHTTLGISIGD*ALRHIFITFPL
Trigger: AAGAGGAAACGTGATGAAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355243.8
ENST00000361791.7
ENST00000370296.6
ENST00000427256.6
ENST00000553492.5
ENST00000554363.2
ENST00000679374.1
CDS GCA 72 bp GAGCCCTCAGACACATCTCTTAAAGTCCAGACCAGATaGAAACCTCCACCTCCTCTAATGTGGGCAGGATCA +
Preference number: 6 (lower is better)
Translates to: EPSDTSLKVQTR*KPPPPLMWAGS
Trigger: TGATCCTGCCCACATTAGAGGAGGTGGAGGTTTGCATCTGGTCTGGACTTTAAGAGATGTGTCTGAGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS CAA 72 bp TTCCGCAAACTGTCCACACCACTCTGGGAATCTCCATaGGGGACTGAGCCCTCAGACACATCTCTTAAAGTC +
Preference number: 6 (lower is better)
Translates to: FRKLSTPLWESP*GTEPSDTSLKV
Trigger: GACTTTAAGAGATGTGTCTGAGGGCTCAGTCCCCAATGGAGATTCCCAGAGTGGTGTGGACAGTTTGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428433.5
CDS CCA 72 bp GTCCAGACCAGATGCAAACCTCCACCTCCTCTAATGTaGGCAGGATCAGTGTATACCTCAACTTCATCACGT +
Preference number: 6 (lower is better)
Translates to: VQTRCKPPPPLM*AGSVYTSTSSR
Trigger: ACGTGATGAAGTTGAGGTATACACTGATCCTGCCCACATTAGAGGAGGTGGAGGTTTGCATCTGGTCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428433.5