Pregenerated sensors for PATL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000229474, ENSG00000282077Ensembl transcript IDs: ENST00000434130.6, ENST00000558159.1, ENST00000558481.5, ENST00000558573.1, ENST00000558809.1, ENST00000560110.1, ENST00000560780.1, ENST00000633013.1, ENST00000682850.1
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCTCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGCGGGGTTTTGCACTCTaGAGCTGCACCATCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: ARRGLKHVDTATWPREPSRGFAL*SCTICT Trigger: AGTGCAGATGGTGCAGCTGCAGAGTGCAAAACCCCG...CGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATCCAGGCGGGGTTTTaGACTCTGCAGCTGCACCAT | + |
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Preference number: 2 (lower is better) Translates to: ARRGLKHVDTATWPREPSIQAGF*TLQLHH Trigger: ATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGAT...CGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| 3UTR-3UTR GCA 90 bp | TCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTGCAGCTGCACCATCTaGACTTTTATCACCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SARAEACRHSYLAQGTLDCSCTI*TFITQS Trigger: GGACTGGGTGATAAAAGTGCAGATGGTGCAGCTGCA...ATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| 3UTR CCA 72 bp | GCTCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTaGCCCAGGGAACCCTCGATTCGGACCACGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: ARRGLKHVDTAT*PREPSIRTTDS Trigger: TGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| 3UTR GCA 72 bp | GGAACCCTCGATTCGGACCACGGACTCATAAGCCTCTaGCTTCGGAATGTAAGGCGTTACCAGCTTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GTLDSDHGLISL*LRNVRRYQLEG Trigger: TCCCTCAAGCTGGTAACGCCTTACATTCCGAAGGCAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | GCTCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGACGAGGTCAGCAGGCTaGAGAAGAGAGTTGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARRGLKHVDTATWPREPSTRSAG*RRELGL Trigger: CAGACCCAACTCTCTTCTGCAGCCTGCTGACCTCGT...CGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | CGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTGTCTGGGTCCAGATCTaGGTCCAGATCCTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: RRGLKHVDTATWPREPSIVWVQI*VQILLV Trigger: GACGAGGAGGATCTGGACCCAGATCTGGACCCAGAC...AATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | GCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGTGCTGCAAGATTCGTTaGTGCCGAGGGTGGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ARAEACRHSYLAQGTLDSCCKIR*CRGWSW Trigger: CCAGCTCCACCCTCGGCACCAACGAATCTTGCAGCA...CGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | CAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCATAAGCCTCTGAGGTCCAAAGTGCTGTaGTGGAGAGCTGGTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QLPGPGNPRFGPRTHKPLRSKVL*WRAGAG Trigger: CCCAGCACCAGCTCTCCAGCACAGCACTTTGGACCT...CAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | GCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCCCAAGGCTTCTTGGCTaGGGGACTTTAAGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ACRHSYLAQGTLDSDHGLPRLLG*GTLSQE Trigger: CTCCTGGCTTAAAGTCCCCCAGCCAAGAAGCCTTGG...GAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | GCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCCTATGCTGCTGCTGCTaGAAGATTCGTTGGTGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ACRHSYLAQGTLDSDHGLLCCCC*KIRWCR Trigger: TCGGCACCAACGAATCTTGCAGCAGCAGCAGCATAG...GAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | AGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTATCCAGGCGGGGTTTTaGACTCTGCAGCTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: SMSTQLPGPGNPRFGPRTIQAGF*TLQLHH Trigger: ATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGAT...AGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | CGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCTAAGCAGAGCTCTCTaGGTGTTGTGGACAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: RRGLKHVDTATWPREPSILSRAL*VLWTAP Trigger: TGGTGCTGTCCACAACACCCAGAGAGCTCTGCTTAG...AATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | GCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGTCCAAAGTGCTGTGCTaGAGAGCTGGTGCTGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ARAEACRHSYLAQGTLDSSKVLC*RAGAGK Trigger: TTTCCCAGCACCAGCTCTCCAGCACAGCACTTTGGA...CGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | GCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCGAGACCAAGGCTTCTTaGCTGGGGGACTTTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ACRHSYLAQGTLDSDHGLETKAS*LGDFKP Trigger: TGGCTTAAAGTCCCCCAGCCAAGAAGCCTTGGTCTC...GAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR TCA 90 bp | CAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCATAAGCCTCTGATGCAAGGAGGCAAGTaGCATTCCCAGCATACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QLPGPGNPRFGPRTHKPLMQGGK*HSQHTR Trigger: CCTGGTATGCTGGGAATGTCACTTGCCTCCTTGCAT...CAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | CTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGCTCTCTGGGTGTTGTaGACAGCACCAAGTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LKHVDTATWPREPSIRTTALWVL*TAPSTA Trigger: AGCTGTACTTGGTGCTGTCCACAACACCCAGAGAGC...CGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | AGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCATAAGCCTCTGCTGCAGCTGCACCATCTaGACTTTTATCACCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SYLAQGTLDSDHGLISLCCSCTI*TFITQS Trigger: GGACTGGGTGATAAAAGTGCAGATGGTGCAGCTGCA...GCAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | CACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCATAAGCCTCGGACTCATAAGCCTCTaGCTTCGGAATGTAAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: HSYLAQGTLDSDHGLISLGLISL*LRNVRR Trigger: ACGCCTTACATTCCGAAGGCAGAGGCTTATGAGTCC...GAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | CTGGTAATAGTAGTCATCCAGGCGGGGTTTTGCACTCTGCAGCTGCACCATCTGAGCCGAGGTCCAAAGTaGTGTGCTGGAGAGCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LVIVVIQAGFCTLQLHHLSRGPK*CAGELV Trigger: CACCAGCTCTCCAGCACAGCACTTTGGACCTCGGCT...CAGATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGATGACTACTATTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | GCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATTCGTTTGCACTCTGCAGCTaGACCATCTGCACTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: ARAEACRHSYLAQGTLDSFALCS*TICTFI Trigger: GATAAAAGTGCAGATGGTGCAGCTGCAGAGTGCAAA...CGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | AACCCTCGATTCGGACCACGGACTCATAAGCCTCTGCCTTCGGAATGTAAGGCGCGGGGTTTTGCACTCTaGAGCTGCACCATCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: NPRFGPRTHKPLPSECKARGFAL*SCTICT Trigger: AGTGCAGATGGTGCAGCTGCAGAGTGCAAAACCCCG...CGCCTTACATTCCGAAGGCAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | CTGGTAATAGTAGTCATCCAGGCGGGGTTTTGCACTCTGCAGCTGCACCATCTGGTTAGCATAGGGGTCTaGCTGCTGAGACCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LVIVVIQAGFCTLQLHHLVSIGV*LLRPRL Trigger: AAGCCTTGGTCTCAGCAGCCAGACCCCTATGCTAAC...CAGATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGATGACTACTATTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | AACCCTCGATTCGGACCACGGACTCATAAGCCTCTGCCTTCGGAATGTAAGGCGGAAGTGGGGCTCTCTTaGTGTTTGACTATGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NPRFGPRTHKPLPSECKAEVGLS*CLTMLL Trigger: CAGCAGCATAGTCAAACACCAAGAGAGCCCCACTTC...CGCCTTACATTCCGAAGGCAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | AACCCTCGATTCGGACCACGGACTCATAAGCCTCTGCCTTCGGAATGTAAGGCGAGCACCAAGTACAGCTaGATCCCCAAGATCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: NPRFGPRTHKPLPSECKASTKYS*IPKIIL Trigger: GAGAATGATCTTGGGGATCCAGCTGTACTTGGTGCT...CGCCTTACATTCCGAAGGCAGAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR GCA 90 bp | GCTTCTGGTAATATTCCTGGTAATAGTAGTCATCCAGGCGGGGTTTTGCACTCTTGCAAGATTCGTTGGTaGCGAGGGTGGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ASGNIPGNSSHPGGVLHSCKIRW*RGWSWV Trigger: GACCCAGCTCCACCCTCGGCACCAACGAATCTTGCA...AGAGTGCAAAACCCCGCCTGGATGACTACTATTACCAGGAATATTACCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | GCTTCTGGTAATATTCCTGGTAATAGTAGTCATCCAGGCGGGGTTTTGCACTCTGTCGACACAGCTACCTaGCCCAGGGAACCCTCGATT | + |
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Preference number: 4 (lower is better) Translates to: ASGNIPGNSSHPGGVLHSVDTAT*PREPSI Trigger: AATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGAC...AGAGTGCAAAACCCCGCCTGGATGACTACTATTACCAGGAATATTACCAGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CCA 90 bp | AATAGTAGTCATCCAGGCGGGGTTTTGCACTCTGCAGCTGCACCATCTGCACTTAGACTTACCCACCACTaGCACTTCCTAAGGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NSSHPGGVLHSAAAPSALRLTHH*HFLRSV Trigger: CACACTCCTTAGGAAGTGCCAGTGGTGGGTAAGTCT...AAGTGCAGATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGATGACTACTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CAA 90 bp | GCTCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGAGCATACCAGGGGCCTaGACTCCAGGGGAGCTAAGC | + |
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Preference number: 5 (lower is better) Translates to: ARRGLKHVDTATWPREPSSIPGA*TPGELS Trigger: GCTTAGCTCCCCTGGAGTCAAGGCCCCTGGTATGCT...CGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS CCA 90 bp | GGTGGGAGGAAGCAGCAAGACCAGGTGTTCCAACATCCAGGGCAGTaGCAGCTTGGCCCTCCCTCAGATTCAAAGTCAGCTGGGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GGRKQQDQVFQHPGQ*QLGPPSDSKSAGPG Trigger: TCCTGGCCCAGCTGACTTTGAATCTGAGGGAGGGCCAAGCTGCCACTGCCCTGGATGTTGGAACACCTGGTCTTGCTGCTTCCTCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560780.1 |
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| CDS GCA 90 bp | ATTCTTGGCCATGGTCTTGAGGAGAGAGACCCTGGGGTCTCAGACTaGCATAAACACCCACCCTCCCAGCTCGGCTCTAGGGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ILGHGLEERDPGVSD*HKHPPSQLGSRELS Trigger: GGACAGCTCCCTAGAGCCGAGCTGGGAGGGTGGGTGTTTATGGCAGTCTGAGACCCCAGGGTCTCTCTCCTCAAGACCATGGCCAAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS-3UTR CAA 90 bp | TCGGCGAGGGCTGAAGCATGTCGACACAGCTACCTGGCCCAGGGAACCCTCGATGGAAGTGGGGCTCTCTaGGTGTTTGACTATGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: SARAEACRHSYLAQGTLDGSGAL*VFDYAA Trigger: AGCAGCATAGTCAAACACCAAGAGAGCCCCACTTCC...ATCGAGGGTTCCCTGGGCCAGGTAGCTGTGTCGACATGCTTCAGCCCTCGCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS CCA 90 bp | AGCTCCTCCTCAGAAGCCAAGGGGCCACAGGTCTTACCTGGCCCTTaGTTTAAGTGTGGGCCAGAGGAGAAGGTAAGATGGGGCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSSEAKGPQVLPGP*FKCGPEEKVRWGSA Trigger: AGCTGAGCCCCATCTTACCTTCTCCTCTGGCCCACACTTAAACCAAGGGCCAGGTAAGACCTGTGGCCCCTTGGCTTCTGAGGAGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS-3UTR CAA 90 bp | CACAGCTACCTGGCCCAGGGAACCCTCGATTCGGACCACGGACTCATAAGCCTCAGAGCTCTCTGGGTGTaGTGGACAGCACCAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: HSYLAQGTLDSDHGLISLRALWV*WTAPST Trigger: TGTACTTGGTGCTGTCCACAACACCCAGAGAGCTCT...GAGGCTTATGAGTCCGTGGTCCGAATCGAGGGTTCCCTGGGCCAGGTAGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS-3UTR CAA 90 bp | CTGGTAATAGTAGTCATCCAGGCGGGGTTTTGCACTCTGCAGCTGCACCATCTGGGCTGCAGAAGAGAGTaGGGTCTGGTGAGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: LVIVVIQAGFCTLQLHHLGCRRE*GLVRAA Trigger: GGCTGCCCTCACCAGACCCAACTCTCTTCTGCAGCC...CAGATGGTGCAGCTGCAGAGTGCAAAACCCCGCCTGGATGACTACTATTACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558481.5 |
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| CDS CCA 90 bp | AGCCACAGACAGTTCAGGACAACCCTCTCCCATTCCCTTCTGCCATaGTACCTGGGTGTTGTGGACAGCACCAAGTACAGCTGGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: SHRQFRTTLSHSLLP*YLGVVDSTKYSWIP Trigger: GGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCCTGAACTGTCTGTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 90 bp | GGACAACCCTCTCCCATTCCCTTCTGCCATGGTACCTGGGTGTTGTaGACAGCACCAAGTACAGCTGGATCCCCAAGATCATTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GQPSPIPFCHGTWVL*TAPSTAGSPRSFSS Trigger: GGAAGAGAATGATCTTGGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 90 bp | GACAGTTCAGGACAACCCTCTCCCATTCCCTTCTGCCATGGTACCTaGGTGTTGTGGACAGCACCAAGTACAGCTGGATCCCCAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: DSSGQPSPIPFCHGT*VLWTAPSTAGSPRS Trigger: TGATCTTGGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCCTGAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 90 bp | GAGGTTAGCATAGGGGTCTGGCTGCTGAGACCAAGGCTTCTTGGCTaGGGGACTTTAAGCCAGGAGGAACAACCCTTTAGACTTACCCAC | + |
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Preference number: 5 (lower is better) Translates to: EVSIGVWLLRPRLLG*GTLSQEEQPFRLTH Trigger: GTGGGTAAGTCTAAAGGGTTGTTCCTCCTGGCTTAAAGTCCCCCAGCCAAGAAGCCTTGGTCTCAGCAGCCAGACCCCTATGCTAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000558481.5 ENST00000560780.1 |
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| CDS TCA 90 bp | CATCTTGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCACCTGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: HLGRLVDFLLSRVLQ*NSIASLWKVNHLTV Trigger: AACAGTCAGGTGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434130.6 ENST00000560780.1 |
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| CDS TCA 90 bp | CATCTTGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCCAGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: HLGRLVDFLLSRVLQ*NSIASLWKVNPENG Trigger: TCCATTCTCTGGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS TCA 90 bp | CATCTTGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACTATGTACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: HLGRLVDFLLSRVLQ*NSIASLWKVNYVPG Trigger: GCCTGGTACATAGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682850.1 |
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| CDS GCA 90 bp | TGGGTCTTTAAGGTCTGGAAGAGCTTCTCAACCTGGTTGCTTTGCTaGTCAGAAAAGCAGGGCGGTGGAGGCCTATACTTCCAGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: WVFKVWKSFSTWLLC*SEKQGGGGLYFQPS Trigger: GGAAGGCTGGAAGTATAGGCCTCCACCGCCCTGCTTTTCTGAGCAGCAAAGCAACCAGGTTGAGAAGCTCTTCCAGACCTTAAAGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS GCA 90 bp | TCCTGGGTCTTTAAGGTCTGGAAGAGCTTCTCAACCTGGTTGCTTTaGTGCTCAGAAAAGCAGGGCGGTGGAGGCCTATACTTCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SWVFKVWKSFSTWLL*CSEKQGGGGLYFQP Trigger: AGGCTGGAAGTATAGGCCTCCACCGCCCTGCTTTTCTGAGCAGCAAAGCAACCAGGTTGAGAAGCTCTTCCAGACCTTAAAGACCCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS TCA 90 bp | CATCTTGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCTGAGACAAGAA | + |
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Preference number: 5 (lower is better) Translates to: HLGRLVDFLLSRVLQ*NSIASLWKVNLRQE Trigger: TTCTTGTCTCAGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS GCA 90 bp | CACAGCCTTTTCCATCTGCTCTGCCCCACCCAACGCCCTTTCTATTaGCTCTTTGAACAAGTTCCACCTGCCCTGACTCACTGCAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: HSLFHLLCPTQRPFY*LFEQVPPALTHCNL Trigger: TAAATTGCAGTGAGTCAGGGCAGGTGGAACTTGTTCAAAGAGGCAATAGAAAGGGCGTTGGGTGGGGCAGAGCAGATGGAAAAGGCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS TCA 90 bp | TTTCCATCTGCTCTGCCCCACCCAACGCCCTTTCTATTGCCTCTTTaGACAAGTTCCACCTGCCCTGACTCACTGCAATTTAACCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: FPSALPHPTPFLLPL*TSSTCPDSLQFNPT Trigger: AGTAGGGTTAAATTGCAGTGAGTCAGGGCAGGTGGAACTTGTTCAAAGAGGCAATAGAAAGGGCGTTGGGTGGGGCAGAGCAGATGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS TCA 90 bp | CCTCTGCATGCTGGGGCATTTTATATAACATCACGGCCCACTTGTTaGTACCTTCAAGGCAATTCATCTTGGCAGGCTGGTGGACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLHAGAFYITSRPTC*YLQGNSSWQAGGLP Trigger: AGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGCATGCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS GCA 90 bp | CCCTCTTCAATTCCTTCATTAAGTTCTAGCACAGCCTTTTCCATCTaGTCTGCCCCACCCAACGCCCTTTCTATTGCCTCTTTGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSIPSLSSSTAFSI*SAPPNALSIASLNK Trigger: CTTGTTCAAAGAGGCAATAGAAAGGGCGTTGGGTGGGGCAGAGCAGATGGAAAAGGCTGTGCTAGAACTTAATGAAGGAATTGAAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS GCA 90 bp | CCTTTCTATTGCCTCTTTGAACAAGTTCCACCTGCCCTGACTCACTaGAATTTAACCCTACTGTGTGCCATATACTTTACGTGCATATGT | + |
|
Preference number: 5 (lower is better) Translates to: PFYCLFEQVPPALTH*NLTLLCAIYFTCIC Trigger: ACATATGCACGTAAAGTATATGGCACACAGTAGGGTTAAATTGCAGTGAGTCAGGGCAGGTGGAACTTGTTCAAAGAGGCAATAGAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS GCA 90 bp | AGCAATTCAGAGGTAACATTTGCATGTTTGGTACGTGCCAAGCAATaGTTAGTGCTTTACACATTTCCCTTCCTATTTAATCTTAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNSEVTFACLVRAKQ*LVLYTFPFLFNLKN Trigger: GTTCTTAAGATTAAATAGGAAGGGAAATGTGTAAAGCACTAAGCATTGCTTGGCACGTACCAAACATGCAAATGTTACCTCTGAATTGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558159.1 |
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| CDS GCA 90 bp | TTTTCATTCGAGAAAACGGAAACCCAGAAGATTAAGATCTTTGAATaGTACCTAGCAGAAGGAGAACTTCTGTTTATAACTACAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFEKTETQKIKIFE*YLAEGELLFITTAW Trigger: CCAAGCTGTAGTTATAAACAGAAGTTCTCCTTCTGCTAGGTAGCATTCAAAGATCTTAATCTTCTGGGTTTCCGTTTTCTCGAATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000633013.1 |
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| CDS CAA 72 bp | CATCGGCGCCCTCCGATCTGGGGTGCGCGCCCCAGCTaGGGACACCGGGCGCTCATTCTAGGACTTCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRRPPIWGARPS*GHRALILGLQA Trigger: AGCCTGAAGTCCTAGAATGAGCGCCCGGTGTCCCAAGCTGGGGCGCGCACCCCAGATCGGAGGGCGCCGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000633013.1 |
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| CDS TCA 72 bp | AACCACCATGTCTGTCCTGATTCTGAAGCACCACGGTaGCTGGCCGCTCTGAGGAGCCAGGTGGCAACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NHHVCPDSEAPR*LAALRSQVATA Trigger: CGCTGTTGCCACCTGGCTCCTCAGAGCGGCCAGTCACCGTGGTGCTTCAGAATCAGGACAGACATGGTGGTT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558809.1 |
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| CDS CAA 90 bp | GGAAGCAGCAAGACCAGGTGTTCCAACATCCAGGGCAGTGGCAGCTaGGCCCTCCCTCAGATTCAAAGTCAGCTGGGCCAGGATCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSKTRCSNIQGSGS*ALPQIQSQLGQDPS Trigger: AGAGGGATCCTGGCCCAGCTGACTTTGAATCTGAGGGAGGGCCAAGCTGCCACTGCCCTGGATGTTGGAACACCTGGTCTTGCTGCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560780.1 |
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| CDS GCA 72 bp | TTTAACGCTAGTAGCAGGGCCACCGCCTGTGGGCGATaGACAGCTCTGCTAGGACCTGGTTTTAAGGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FNASSRATACGR*TALLGPGFKAR Trigger: TCTCGCCTTAAAACCAGGTCCTAGCAGAGCTGTGCATCGCCCACAGGCGGTGGCCCTGCTACTAGCGTTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | GGACAACCCTCTCCCATTCCCTTCTGCCATGGTACCTaGGTGTTGTGGACAGCACCAAGTACAGCTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: GQPSPIPFCHGT*VLWTAPSTAGS Trigger: GGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 72 bp | CCCTCTCCCATTCCCTTCTGCCATGGTACCTGGGTGTaGTGGACAGCACCAAGTACAGCTGGATCCCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSPIPFCHGTWV*WTAPSTAGSPR Trigger: TCTTGGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 72 bp | TCGCTTTGCAGACTGGCCCCAGAGATGCTAAGTGACTaGCTAATGGTGCCCCCGCCAGTTAACTGCTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLCRLAPEMLSD*LMVPPPVNCSD Trigger: GTCCGAGCAGTTAACTGGCGGGGGCACCATTAGCAAGTCACTTAGCATCTCTGGGGCCAGTCTGCAAAGCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000633013.1 |
||
| CDS TCA 72 bp | GTCCAAGGTCTGCCACAGAAAATGCAAGGAGGCAAGTaGCATTCCCAGCATACCAGGGGCCTTGACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQGLPQKMQGGK*HSQHTRGLDSR Trigger: CCTGGAGTCAAGGCCCCTGGTATGCTGGGAATGTCACTTGCCTCCTTGCATTTTCTGTGGCAGACCTTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000434130.6 ENST00000558481.5 ENST00000560110.1 ENST00000682850.1 |
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| CDS TCA 72 bp | GCAAAGATATTCCAAACTGATTCTGAAGCACCACGGTaGCTGGCCGCTCTGAGGAGCCAGGTGGCAACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: AKIFQTDSEAPR*LAALRSQVATA Trigger: CGCTGTTGCCACCTGGCTCCTCAGAGCGGCCAGTCACCGTGGTGCTTCAGAATCAGTTTGGAATATCTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS GCA 72 bp | TTCTGTGGGTTTAACTCGGCCTCCCTTCTCCCAAGGTaGCCCGAACCATCCCCCAGTAAGTCAAATGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: FCGFNSASLLPR*PEPSPSKSNGT Trigger: GGTTCCATTTGACTTACTGGGGGATGGTTCGGGGCACCTTGGGAGAAGGGAGGCCGAGTTAAACCCACAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | TCAGAAGCCAAGGGGCCACAGGTCTTACCTGGCCCTTaGTTTAAGTGTGGGCCAGAGGAGAAGGTAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SEAKGPQVLPGP*FKCGPEEKVRW Trigger: CCATCTTACCTTCTCCTCTGGCCCACACTTAAACCAAGGGCCAGGTAAGACCTGTGGCCCCTTGGCTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS CCA 72 bp | CAGTTCAGGACAACCCTCTCCCATTCCCTTCTGCCATaGTACCTGGGTGTTGTGGACAGCACCAAGTACAGC | + |
|
Preference number: 6 (lower is better) Translates to: QFRTTLSHSLLP*YLGVVDSTKYS Trigger: GCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCCTGAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | AAGCAGCAAGACCAGGTGTTCCAACATCCAGGGCAGTaGCAGCTTGGCCCTCCCTCAGATTCAAAGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KQQDQVFQHPGQ*QLGPPSDSKSA Trigger: AGCTGACTTTGAATCTGAGGGAGGGCCAAGCTGCCACTGCCCTGGATGTTGGAACACCTGGTCTTGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560780.1 |
||
| CDS CAA 72 bp | CCACAGGTCTTACCTGGCCCTTCAAGGCAATTCATCTaGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PQVLPGPSRQFI*AGWWTSFLAVS Trigger: GGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGGCCAGGTAAGACCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434130.6 ENST00000682850.1 |
||
| CDS TCA 72 bp | AGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLVDFLLSRVLQ*NSIASLWKVNH Trigger: GTGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434130.6 ENST00000560780.1 |
||
| CDS TCA 72 bp | AGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVDFLLSRVLQ*NSIASLWKVNP Trigger: TGGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS TCA 72 bp | AGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLVDFLLSRVLQ*NSIASLWKVNL Trigger: CAGGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS GCA 72 bp | ACAGACAGTTCAGGACAACCCTCTCCCATTCCCTTCTaGCATGGTACCTGGGTGTTGTGGACAGCACCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: TDSSGQPSPIPF*HGTWVLWTAPS Trigger: ACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCCTGAACTGTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | CCTGGCCCTTCAAGGCAATTCATCTTGGCAGGCTGGTaGACTTCCTTCTTAGCCGTGTCCTCCAGTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PGPSRQFILAGW*TSFLAVSSSET Trigger: TGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434130.6 ENST00000682850.1 |
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| CDS CCA 72 bp | TCTCCCATTCCCTTCTGCCATGGTACCTGGGTGTTGTaGACAGCACCAAGTACAGCTGGATCCCCAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SPIPFCHGTWVL*TAPSTAGSPRS Trigger: TGATCTTGGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 90 bp | TCAGGACAACCCTCTCCCATTCCCTTCTGCCATGGTACCTGGGTGTaGTGGACAGCACCAAGTACAGCTGGATCCCCAAGATCATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGQPSPIPFCHGTWV*WTAPSTAGSPRSFS Trigger: AGAGAATGATCTTGGGGATCCAGCTGTACTTGGTGCTGTCCACAACACCCAGGTACCATGGCAGAAGGGAATGGGAGAGGGTTGTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS TCA 72 bp | GCTCTGCCCCACCCAACGCCCTTTCTATTGCCTCTTTaGACAAGTTCCACCTGCCCTGACTCACTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: ALPHPTPFLLPL*TSSTCPDSLQF Trigger: AAATTGCAGTGAGTCAGGGCAGGTGGAACTTGTTCAAAGAGGCAATAGAAAGGGCGTTGGGTGGGGCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS GCA 72 bp | AAGGTCTGGAAGAGCTTCTCAACCTGGTTGCTTTGCTaGTCAGAAAAGCAGGGCGGTGGAGGCCTATACTTC | + |
|
Preference number: 6 (lower is better) Translates to: KVWKSFSTWLLC*SEKQGGGGLYF Trigger: GAAGTATAGGCCTCCACCGCCCTGCTTTTCTGAGCAGCAAAGCAACCAGGTTGAGAAGCTCTTCCAGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS CCA 72 bp | TTACCTGGCCCTTCAAGGCAATTCATCTTGGCAGGCTaGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPGPSRQFILAG*WTSFLAVSSSE Trigger: TTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGGCCAGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434130.6 ENST00000682850.1 |
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| CDS CCA 72 bp | GCCAAGAGGCACCATCCTCAGTCAGTAAGGATGACATaGCACCCTAAAACAGCCATGGAATCCTCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AKRHHPQSVRMT*HPKTAMESSQQ Trigger: TTGCTGGGAGGATTCCATGGCTGTTTTAGGGTGCCATGTCATCCTTACTGACTGAGGATGGTGCCTCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS CCA 72 bp | GCAGAGCTCTCTTCAAGGCAATTCATCTTGGCAGGCTaGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: AELSSRQFILAG*WTSFLAVSSSE Trigger: TTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGAGAGCTCTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS CCA 72 bp | CCCTCTCCTTCAAGGCAATTCATCTTGGCAGGCTGGTaGACTTCCTTCTTAGCCGTGTCCTCCAGTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PSPSRQFILAGW*TSFLAVSSSET Trigger: TGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560780.1 |
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| CDS CCA 72 bp | TCTCCCTCTCCTTCAAGGCAATTCATCTTGGCAGGCTaGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPSPSRQFILAG*WTSFLAVSSSE Trigger: TTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGAGAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560780.1 |
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| CDS CAA 72 bp | ACGGCCCACTTGTTGATACCTTCAAGGCAATTCATCTaGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAHLLIPSRQFI*AGWWTSFLAVS Trigger: GGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS TCA 72 bp | AGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTaGAACAGCATTGCCAGCCTCTGGAAGGTAAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: RLVDFLLSRVLQ*NSIASLWKVNY Trigger: ATAGTTTACCTTCCAGAGGCTGGCAATGCTGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682850.1 |
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| CDS GCA 72 bp | TTTAAGGTCTGGAAGAGCTTCTCAACCTGGTTGCTTTaGTGCTCAGAAAAGCAGGGCGGTGGAGGCCTATAC | + |
|
Preference number: 6 (lower is better) Translates to: FKVWKSFSTWLL*CSEKQGGGGLY Trigger: GTATAGGCCTCCACCGCCCTGCTTTTCTGAGCAGCAAAGCAACCAGGTTGAGAAGCTCTTCCAGACCTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS CCA 72 bp | GAGCTCTCTTCAAGGCAATTCATCTTGGCAGGCTGGTaGACTTCCTTCTTAGCCGTGTCCTCCAGTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: ELSSRQFILAGW*TSFLAVSSSET Trigger: TGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGAGAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560110.1 |
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| CDS CCA 72 bp | ACTAGTTATGGGATCCAGGGGAATAAATACCAGGAATaGACTACTGAGACAGAGGGGCCCAGGATCAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSYGIQGNKYQE*TTETEGPRIRQ Trigger: TTGCCTGATCCTGGGCCCCTCTGTCTCAGTAGTCCATTCCTGGTATTTATTCCCCTGGATCCCATAACTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 90 bp | TATAACATCACGGCCCACTTGTTGATACCTTCAAGGCAATTCATCTaGGCAGGCTGGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: YNITAHLLIPSRQFI*AGWWTSFLAVSSSE Trigger: TTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 90 bp | ACCTCTGCATGCTGGGGCATTTTATATAACATCACGGCCCACTTGTaGATACCTTCAAGGCAATTCATCTTGGCAGGCTGGTGGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSACWGILYNITAHL*IPSRQFILAGWWTS Trigger: GGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGCATGCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 90 bp | GCAACCTCTGCATGCTGGGGCATTTTATATAACATCACGGCCCACTaGTTGATACCTTCAAGGCAATTCATCTTGGCAGGCTGGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ATSACWGILYNITAH*LIPSRQFILAGWWT Trigger: AGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGCATGCAGAGGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS GCA 72 bp | ATTCCTTCATTAAGTTCTAGCACAGCCTTTTCCATCTaGTCTGCCCCACCCAACGCCCTTTCTATTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: IPSLSSSTAFSI*SAPPNALSIAS Trigger: AGAGGCAATAGAAAGGGCGTTGGGTGGGGCAGAGCAGATGGAAAAGGCTGTGCTAGAACTTAATGAAGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | TTGATACCTTCAAGGCAATTCATCTTGGCAGGCTGGTaGACTTCCTTCTTAGCCGTGTCCTCCAGTGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LIPSRQFILAGW*TSFLAVSSSET Trigger: TGTTTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS CCA 72 bp | TTGTTGATACCTTCAAGGCAATTCATCTTGGCAGGCTaGTGGACTTCCTTCTTAGCCGTGTCCTCCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLIPSRQFILAG*WTSFLAVSSSE Trigger: TTCACTGGAGGACACGGCTAAGAAGGAAGTCCACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS CAA 72 bp | TCTCAATCCGGTATAATACCCGAAGCCTCTGACTGCTaGCAGCTTCTATATCCTGCTCTTGAGTTCCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQSGIIPEASDC*QLLYPALEFHG Trigger: CCCATGGAACTCAAGAGCAGGATATAGAAGCTGCAAGCAGTCAGAGGCTTCGGGTATTATACCGGATTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434130.6 ENST00000560780.1 ENST00000682850.1 |
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| CDS CAA 90 bp | TGTCCCCCACCCCCAGGTAGCAATTCAGAGGTAACATTTGCATGTTaGGTACGTGCCAAGCAATGCTTAGTGCTTTACACATTTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CPPPPGSNSEVTFAC*VRAKQCLVLYTFPF Trigger: GAAGGGAAATGTGTAAAGCACTAAGCATTGCTTGGCACGTACCAAACATGCAAATGTTACCTCTGAATTGCTACCTGGGGGTGGGGGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558159.1 |
||
| CDS TCA 72 bp | GCTGGGGCATTTTATATAACATCACGGCCCACTTGTTaGTACCTTCAAGGCAATTCATCTTGGCAGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGAFYITSRPTC*YLQGNSSWQAG Trigger: ACCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS CAA 72 bp | TGCTGGGGCATTTTATATAACATCACGGCCCACTTGTaGATACCTTCAAGGCAATTCATCTTGGCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CWGILYNITAHL*IPSRQFILAGW Trigger: CCAGCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
||
| CDS CAA 72 bp | GCATGCTGGGGCATTTTATATAACATCACGGCCCACTaGTTGATACCTTCAAGGCAATTCATCTTGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ACWGILYNITAH*LIPSRQFILAG Trigger: GCCTGCCAAGATGAATTGCCTTGAAGGTATCAACAAGTGGGCCGTGATGTTATATAAAATGCCCCAGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS GCA 72 bp | TGCCTCTTTGAACAAGTTCCACCTGCCCTGACTCACTaGAATTTAACCCTACTGTGTGCCATATACTTTACG | + |
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Preference number: 6 (lower is better) Translates to: CLFEQVPPALTH*NLTLLCAIYFT Trigger: CGTAAAGTATATGGCACACAGTAGGGTTAAATTGCAGTGAGTCAGGGCAGGTGGAACTTGTTCAAAGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 72 bp | CCCCCAGGTAGCAATTCAGAGGTAACATTTGCATGTTaGGTACGTGCCAAGCAATGCTTAGTGCTTTACACA | + |
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Preference number: 6 (lower is better) Translates to: PPGSNSEVTFAC*VRAKQCLVLYT Trigger: TGTGTAAAGCACTAAGCATTGCTTGGCACGTACCAAACATGCAAATGTTACCTCTGAATTGCTACCTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558159.1 |
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| CDS GCA 72 bp | AATCTAAAGCTTGTCCCCTTAGGTACTATGTTATACTaGCTCCTAGAAGAAACCGAAACTCTAGGGCACTAT | + |
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Preference number: 6 (lower is better) Translates to: NLKLVPLGTMLY*LLEETETLGHY Trigger: ATAGTGCCCTAGAGTTTCGGTTTCTTCTAGGAGGCAGTATAACATAGTACCTAAGGGGACAAGCTTTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558159.1 |
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| CDS CAA 90 bp | AGTAATATGAGGCTGTCCTGGGTTGTTGTTGATAATTTTACTAGGTaGGTGAGAAAAATAAAGCCCAGAAGAGTGACCTTTCAGTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SNMRLSWVVVDNFTR*VRKIKPRRVTFQSP Trigger: GGGTGACTGAAAGGTCACTCTTCTGGGCTTTATTTTTCTCACCAACCTAGTAAAATTATCAACAACAACCCAGGACAGCCTCATATTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CAA 90 bp | AAGATTATCAAAAGCCTAAACAGCAAGGACATAGGGAGGAACTTCTaGGCACAGAACTTTCCAAACACTTTTTCCCAGAGAATGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: KIIKSLNSKDIGRNF*AQNFPNTFSQRMEK Trigger: TTTCTCCATTCTCTGGGAAAAAGTGTTTGGAAAGTTCTGTGCCAAGAAGTTCCTCCCTATGTCCTTGCTGTTTAGGCTTTTGATAATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000682850.1 |
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| CDS GCA 72 bp | GAGGTAACATTTGCATGTTTGGTACGTGCCAAGCAATaGTTAGTGCTTTACACATTTCCCTTCCTATTTAAT | + |
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Preference number: 6 (lower is better) Translates to: EVTFACLVRAKQ*LVLYTFPFLFN Trigger: ATTAAATAGGAAGGGAAATGTGTAAAGCACTAAGCATTGCTTGGCACGTACCAAACATGCAAATGTTACCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558159.1 |
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| CDS CAA 90 bp | CTCTCTCTTGTGCATTATCTCATTTCATTAGGTCCATGGAGAGTATaGCATTTTCTTAGTTTAGGCATGGCCTCCACAATAAAGATTATC | + |
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Preference number: 6 (lower is better) Translates to: LSLVHYLISLGPWRV*HFLSLGMASTIKII Trigger: GATAATCTTTATTGTGGAGGCCATGCCTAAACTAAGAAAATGCAATACTCTCCATGGACCTAATGAAATGAGATAATGCACAAGAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000682850.1 |
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| CDS GCA 72 bp | GAGAAAACGGAAACCCAGAAGATTAAGATCTTTGAATaGTACCTAGCAGAAGGAGAACTTCTGTTTATAACT | + |
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Preference number: 6 (lower is better) Translates to: EKTETQKIKIFE*YLAEGELLFIT Trigger: AGTTATAAACAGAAGTTCTCCTTCTGCTAGGTAGCATTCAAAGATCTTAATCTTCTGGGTTTCCGTTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000633013.1 |
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| CDS TCA 72 bp | TTATTGTACTATACTTGCCTATTTTCAGACTATAGTTaGCCAAGGGTAACTGAAATGGCAGAAAGTGAAACC | + |
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Preference number: 6 (lower is better) Translates to: LLYYTCLFSDYS*PRVTEMAESET Trigger: GGTTTCACTTTCTGCCATTTCAGTTACCCTTGGTCAACTATAGTCTGAAAATAGGCAAGTATAGTACAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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| CDS CCA 72 bp | TGCATATGTTCATTTAACAGTAATATGAGGCTGTCCTaGGTTGTTGTTGATAATTTTACTAGGTTGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: CICSFNSNMRLS*VVVDNFTRLVR Trigger: TCTCACCAACCTAGTAAAATTATCAACAACAACCCAGGACAGCCTCATATTACTGTTAAATGAACATATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558573.1 |
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