Pregenerated sensors for PATL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166889Ensembl transcript IDs: ENST00000300146.10
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAAACCCAGGCCCCTGGCTGCCTGGGAACGGGACTTGGGTGAGATaGAGTAGTAAAGACAGCAGTTCTGCCCATGGTGTGGAGACTAAA | + |
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Preference number: 1 (lower is better) Translates to: SNPGPWLPGNGTWVR*SSKDSSSAHGVETK Trigger: TTTAGTCTCCACACCATGGGCAGAACTGCTGTCTTTACTACTTCATCTCACCCAAGTCCCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 90 bp | AGCAGGCTACTAGTGAGGATCATCCTGGGTGACTTCGAATGCACTTaGGGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SRLLVRIILGDFECT*GERLKYPVVVAGKR Trigger: TCTTTTTCCTGCTACAACTACAGGGTACTTGAGCCTTTCCCCTCAAGTGCATTCGAAGTCACCCAGGATGATCCTCACTAGTAGCCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR CCA 90 bp | AACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATaGAGAACAGGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTA | + |
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Preference number: 1 (lower is better) Translates to: NSWWSLGLQHGKKWR*RTGQLVLTEDLTVV Trigger: TACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCCTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 90 bp | CAAAACTCCTTAGTCTGGTTGATTGCTGAATGGGAGAGGAGTAAGTaGGAAAGATCATGGCAGGCTGGCCCTGCAATTATTCAAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: QNSLVWLIAEWERSK*ERSWQAGPAIIQTQ Trigger: CTGGGTTTGAATAATTGCAGGGCCAGCCTGCCATGATCTTTCTCACTTACTCCTCTCCCATTCAGCAATCAACCAGACTAAGGAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 90 bp | AGGCCAAACTTAGCTTCCATGGTTACATTTGGAAGTTTCTATTCATaGCACCAAATAAAAGTGGGGAAGAAGGAAGCATGGCTTACTGAA | + |
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Preference number: 1 (lower is better) Translates to: RPNLASMVTFGSFYS*HQIKVGKKEAWLTE Trigger: TTCAGTAAGCCATGCTTCCTTCTTCCCCACTTTTATTTGGTGTCATGAATAGAAACTTCCAAATGTAACCATGGAAGCTAAGTTTGGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 90 bp | ATGTATGGGGTGTGTGTGTGTGTATCTATGTGTGTGTGTATATCTTaGTTTCTACTTAATTGGCTCTTCTATAGTCATATTAATATGGGG | + |
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Preference number: 1 (lower is better) Translates to: MYGVCVCVSMCVCIS*FLLNWLFYSHINMG Trigger: CCCCATATTAATATGACTATAGAAGAGCCAATTAAGTAGAAATCAAGATATACACACACACATAGATACACACACACACACCCCATACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGACAACTTCAATAGGATaGGGGAAGGAATCCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GRLALQLFKPRPLAAWERTTSIG*GKESFG Trigger: GCCAAAGGATTCCTTCCCTCATCCTATTGAAGTTGT...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGGTTCTGCCCATGGTGTaGAGACTAAAAAGCAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GRLALQLFKPRPLAAWERVLPMV*RLKSKA Trigger: TGCTTTGCTTTTTAGTCTCCACACCATGGGCAGAAC...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGTCAAACCCAGGCCCCTaGCTGCCTGGGAACGGGACT | + |
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Preference number: 2 (lower is better) Translates to: WSVDNGRGKLGNITGEQLSNPGP*LPGNGT Trigger: AGTCCCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGA...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAAAACACTCCATTGGTaGTGGCAGCAGTGCAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: WSVDNGRGKLGNITGEQLKTLHW*WQQCRW Trigger: CCACCTGCACTGCTGCCATCACCAATGGAGTGTTTT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGTGCAAAAAGCCACACTaGCAAAGCAGGCTACTAGTG | + |
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Preference number: 2 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQCKKPH*QSRLLV Trigger: CACTAGTAGCCTGCTTTGGCAGTGTGGCTTTTTGCA...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGGATCCCACAAGACTTTaGTTTGGGGAAAAAGCTACC | + |
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Preference number: 2 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQDPTRL*FGEKAT Trigger: GGTAGCTTTTTCCCCAAAGCAAAGTCTTGTGGGATC...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGAAGATCATGGCAGGCTaGCCCTGCAATTATTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQKIMAG*PCNYSN Trigger: GTTTGAATAATTGCAGGGCCAGCCTGCCATGATCTT...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAACAGTGGGGAAATATCTaGCATTTAGAGAGACAACCC | + |
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Preference number: 2 (lower is better) Translates to: RWSSGGIKGEITLVSLGQQWGNI*HLERQP Trigger: GGGTTGTCTCTCTAAATGTCAGATATTTCCCCACTG...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGATTACACTTGTGTCTCTAGGGCAAAGAAAATGCAAAACAGAACTGAGTTGGCAGCAGTGCAGGTaGCAGCCAAAAGGAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: GEITLVSLGQRKCKTELSWQQCR*QPKGGT Trigger: TGTACCTCCTTTTGGCTGCCACCTGCACTGCTGCCA...ACTCAGTTCTGTTTTGCATTTTCTTTGCCCTAGAGACACAAGTGTAATCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR CAA 90 bp | CTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGACATAACCATGTGTaGTTTCGATTAAGGTGGACAGAAACTAAGGAAATAAAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKYPVVVAGKRHNHV*FRLRWTETKEIKVG Trigger: TCCCACCTTTATTTCCTTAGTTTCTGTCCACCTTAATCGAAACAACACATGGTTATGTCTTTTTCCTGCTACAACTACAGGGTACTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTCAAAACTCCTTAGTCTaGTTGATTGCTGAATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCQNSLV*LIAEWE Trigger: CTCCCATTCAGCAATCAACCAGACTAAGGAGTTTTG...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTTCTTTAAGGACCCTCTaGAGACCACATAAATACATG | + |
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Preference number: 2 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCSLRTL*RPHKYM Trigger: CATGTATTTATGTGGTCTTCAGAGGGTCCTTAAAGA...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGGAAGTTTCTATTCATaGCACCAAATAAAAGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCGSFYS*HQIKVG Trigger: CCCCACTTTTATTTGGTGTCATGAATAGAAACTTCC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGATTAAAAACACTCCATaGGTGATGGCAGCAGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: GRLALQLFKPRPLAAWERIKNTP*VMAAVQ Trigger: CTGCACTGCTGCCATCACCAATGGAGTGTTTTTAAT...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 72 bp | CTGCCAAAGCAGGCTACTAGTGAGGATCATCCTGGGTaGCTTCGAATGCACTTGAGGGGAAAGGCTCAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LPKQATSEDHPG*LRMHLRGKAQV Trigger: TACTTGAGCCTTTCCCCTCAAGTGCATTCGAAGTCACCCAGGATGATCCTCACTAGTAGCCTGCTTTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 72 bp | CTAGTGAGGATCATCCTGGGTGACTTCGAATGCACTTaGGGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: LVRIILGDFECT*GERLKYPVVVA Trigger: TGCTACAACTACAGGGTACTTGAGCCTTTCCCCTCAAGTGCATTCGAAGTCACCCAGGATGATCCTCACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR CCA 72 bp | AAGGAATCCTTTGGCAGGCTACAATCTACTCTGAGGTaGAGTAGTGGAGGGATAAAGGGAGAGATTACACTT | + |
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Preference number: 3 (lower is better) Translates to: KESFGRLQSTLR*SSGGIKGEITL Trigger: AAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCTCAGAGTAGATTGTAGCCTGCCAAAGGATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGATTACACTTGTGTCTCTAGGGCAAAGAAAATGCAAAACAGAACTGAGTCCACAAGACTTTGCTTaGGGGAAAAAGCTACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GEITLVSLGQRKCKTELSPQDFA*GKKLPS Trigger: GGAAGGTAGCTTTTTCCCCAAAGCAAAGTCTTGTGG...ACTCAGTTCTGTTTTGCATTTTCTTTGCCCTAGAGACACAAGTGTAATCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGAGGGAAGGAATCCTTaGGCAGGCTACAATCTACTC | + |
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Preference number: 3 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCEGRNP*AGYNLL Trigger: GAGTAGATTGTAGCCTGCCAAAGGATTCCTTCCCTC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR TCA 72 bp | TTAGCTTCCATGGTTACATTTGGAAGTTTCTATTCATaGCACCAAATAAAAGTGGGGAAGAAGGAAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: LASMVTFGSFYS*HQIKVGKKEAW Trigger: CCATGCTTCCTTCTTCCCCACTTTTATTTGGTGTCATGAATAGAAACTTCCAAATGTAACCATGGAAGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTAATACATCAGCTGGTTaGTGTTTAGAAGAGGTAATG | + |
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Preference number: 3 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCNTSAG*CLEEVM Trigger: CATTACCTCTTCTAAACACAAACCAGCTGATGTATT...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGACCCAGGCCCCTGGCTaGCTGGGAACGGGACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GRLALQLFKPRPLAAWERTQAPG*LGTGLG Trigger: CCCAAGTCCCGTTCCCAGGCAGCCAGGGGCCTGGGT...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGAAAACACTCCATTGGTaGTGGCAGCAGTGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRLALQLFKPRPLAAWERKTLHW*WQQCRW Trigger: CCACCTGCACTGCTGCCATCACCAATGGAGTGTTTT...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGGACTTCGAATGCACTTaGGGGGAAAGGCTCAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: GRLALQLFKPRPLAAWERDFECT*GERLKY Trigger: GTACTTGAGCCTTTCCCCTCAAGTGCATTCGAAGTC...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGCAGTGGGGAAATATCTaGCATTTAGAGAGACAACCC | + |
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Preference number: 4 (lower is better) Translates to: GRLALQLFKPRPLAAWERQWGNI*HLERQP Trigger: GGGTTGTCTCTCTAAATGTCAGATATTTCCCCACTG...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGTCACTGGGGAACAGCTaGTGGAGCCTGGGGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQSLGNS*WSLGLQ Trigger: CTGTAACCCCAGGCTCCACCAGCTGTTCCCCAGTGA...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAATCAAACCCAGGCCCCTaGCTGCCTGGGAACGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQSNPGP*LPGNGT Trigger: AGTCCCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGA...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGTATCTCCCGCACCATTaGGATTCCGATGCTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQYLPHH*DSDADF Trigger: GAAGTCAGCATCGGAATCTCAATGGTGCGGGAGATA...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGGAGGATCATCCTGGGTaGCTTCGAATGCACTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLEDHPG*LRMHLR Trigger: CCTCAAGTGCATTCGAAGTCACCCAGGATGATCCTC...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGAAGAGTTCGGGACACTaGAGAGCTGGTTTGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQKSSGH*RAGLET Trigger: TGTCTCCAAACCAGCTCTGCAGTGTCCCGAACTCTT...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAAGAGTCGACGGTGCTGTaGATGGAGGTGAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQESTVL*MEVSCV Trigger: GACACAACTCACCTCCATCCACAGCACCGTCGACTC...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGGGGAAGAAATGGAGATaGAGAACAGGACAGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQGKKWR*RTGQLV Trigger: AACCAGCTGTCCTGTTCTCCATCTCCATTTCTTCCC...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAAGAGGATGAGGAGCAGTaGCAGGCCAAACTTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQEDEEQ*QAKLVL Trigger: CAGAACAAGTTTGGCCTGTCACTGCTCCTCATCCTC...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAAGTTCTCGTGTTGCCATaGACATCACCTCCGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQVLVLP*TSPPST Trigger: AGTGGACGGAGGTGATGTTCATGGCAACACGAGAAC...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGGGAAGCATGGCTTACTaGAGTAGTCTCAGGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLGSMAY*SSLRKT Trigger: TGTCTTCCTGAGACTACTTCAGTAAGCCATGCTTCC...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAAGGGACACTGCAGAGCTaGTTTGGAGACATCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQGTLQS*FGDILS Trigger: TGAGAGGATGTCTCCAAACCAGCTCTGCAGTGTCCC...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGACATAACCATGTGTGGCAGCAGTGCAGGTaGCAGCCAAAAGGAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: GERLKYPVVVAGKRHNHVWQQCR*QPKGGT Trigger: TGTACCTCCTTTTGGCTGCCACCTGCACTGCTGCCA...CACATGGTTATGTCTTTTTCCTGCTACAACTACAGGGTACTTGAGCCTTTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGCAATCTACTCTGAGGTaGAGTAGTGGAGGGATAAAG | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQQSTLR*SSGGIK Trigger: CTTTATCCCTCCACTACTCCACCTCAGAGTAGATTG...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGTTGAGATTCCGATGCTaGCTTCTATTCTGTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQLRFRC*LLFCCC Trigger: ACAGCAACAGAATAGAAGTCAGCATCGGAATCTCAA...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGACATAACCATGTGGGCTACAATCTACTCTaGGGTGGAGTAGTGGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: GERLKYPVVVAGKRHNHVGYNLL*GGVVEG Trigger: TCCCTCCACTACTCCACCTCAGAGTAGATTGTAGCC...CACATGGTTATGTCTTTTTCCTGCTACAACTACAGGGTACTTGAGCCTTTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAATGTAGGTATAGAGATTaGCTTGGCCAGGGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQCRYRD*LGQGCL Trigger: CAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACA...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGGTTCTGCCCATGGTGTaGAGACTAAAAAGCAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLVLPMV*RLKSKA Trigger: TGCTTTGCTTTTTAGTCTCCACACCATGGGCAGAAC...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAAGATCATGGCAGGCTaGCCCTGCAATTATTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLKIMAG*PCNYSN Trigger: GTTTGAATAATTGCAGGGCCAGCCTGCCATGATCTT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGGGAAGTTTCTATTCATaGCACCAAATAAAAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQGSFYS*HQIKVG Trigger: CCCCACTTTTATTTGGTGTCATGAATAGAAACTTCC...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | GGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAATGGCTTGGCCAGGGCTaGTTGGGGAATCCGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GQLVLTEDLTVVQYMYVQWLGQG*LGNPQK Trigger: CTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCA...TTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAATGCAAAAAGCCACACTaGCAAAGCAGGCTACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQCKKPH*QSRLLV Trigger: CACTAGTAGCCTGCTTTGGCAGTGTGGCTTTTTGCA...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGATCACCTCCGTCCACTaGTTATTTTGTGTTGATTCT | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLITSVH*LFCVDS Trigger: AGAATCAACACAAAATAATCAGTGGACGGAGGTGAT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGTCTTTAAGGACCCTCTaGAGACCACATAAATACATG | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLSLRTL*RPHKYM Trigger: CATGTATTTATGTGGTCTTCAGAGGGTCCTTAAAGA...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAATCAAGTATTCACTTaGTTGGTTGTGAAGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: WSVDNGRGKLGNITGEQLNQVFT*LVVKGR Trigger: CCTTCCCTTCACAACCAATCAAGTGAATACTTGATT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GGAGAGATTACACTTGTGTCTCTAGGGCAAAGAAAATGCAAAACAGAACTGAGTTTCCTGAGCAAGCAGTaGTCCTCGGATTCGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GEITLVSLGQRKCKTELSFLSKQ*SSDSPQ Trigger: CTGAGGCGAATCCGAGGACCACTGCTTGCTCAGGAA...ACTCAGTTCTGTTTTGCATTTTCTTTGCCCTAGAGACACAAGTGTAATCTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | AGGTGGAGTAGTGGAGGGATAAAGGGAGAGATTACACTTGTGTCTCTAGGGCAACAAAACTCCTTAGTCTaGTTGATTGCTGAATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RWSSGGIKGEITLVSLGQQNSLV*LIAEWE Trigger: CTCCCATTCAGCAATCAACCAGACTAAGGAGTTTTG...TTGCCCTAGAGACACAAGTGTAATCTCTCCCTTTATCCCTCCACTACTCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTTTGGCCAGGGCTGCTTaGGGAATCCGCAGAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCLARAA*GIRRSS Trigger: AGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAA...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGACATAACCATGTGGGTACAGGACACATTTaGAGATCTTTTATCGTATCC | + |
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Preference number: 4 (lower is better) Translates to: GERLKYPVVVAGKRHNHVGTGHI*RSFIVS Trigger: GGATACGATAAAAGATCTCCAAATGTGTCCTGTACC...CACATGGTTATGTCTTTTTCCTGCTACAACTACAGGGTACTTGAGCCTTTCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTACAGCTGGTGGAGCCTaGGGTTACAGCATGGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCTAGGA*GYSMGR Trigger: TCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAACTAAACATTGGGGCCTaGGATCTTAGGTTTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GQLVLTEDLTVVQYMYVQLNIGA*DLRFCR Trigger: CCTGCAAAACCTAAGATCTCAGGCCCCAATGTTTAG...TTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | GGAGAGATTACACTTGTGTCTCTAGGGCAAAGAAAATGCAAAACAGAACTGAGTGATCCCACAAGACTTTaGTTTGGGGAAAAAGCTACC | + |
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Preference number: 4 (lower is better) Translates to: GEITLVSLGQRKCKTELSDPTRL*FGEKAT Trigger: GGTAGCTTTTTCCCCAAAGCAAAGTCTTGTGGGATC...ACTCAGTTCTGTTTTGCATTTTCTTTGCCCTAGAGACACAAGTGTAATCTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGGACACAGAATCTGTTaGGTGAAGCTGGGTACAGCC | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCGHRIC*VKLGTA Trigger: GGCTGTACCCAGCTTCACCCAACAGATTCTGTGTCC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGCCCTCAAATTGCACTaGCTTATAGGCGTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCALKLH*LIGVLQ Trigger: CTGGAGCACGCCTATAAGCCAGTGCAATTTGAGGGC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAATCTTCTCCCAGTCCCTaGAATGCATCTTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GQLVLTEDLTVVQYMYVQSSPSP*NASSSS Trigger: TGAAGATGAAGATGCATTTCAGGGACTGGGAGAAGA...TTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTTGGGAGAGGAGTAAGTaGGAAAGATCATGGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCWERSK*ERSWQA Trigger: AGCCTGCCATGATCTTTCTCACTTACTCCTCTCCCA...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CCA 90 bp | GGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAGGGAAGGAATCCTTTaGCAGGCTACAATCTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLVLTEDLTVVQYMYVQREGIL*QATIYS Trigger: AGAGTAGATTGTAGCCTGCCAAAGGATTCCTTCCCT...TTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGGGACTTGGGTGAGATaGAGTAGTAAAGACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCGTWVR*SSKDSS Trigger: ACTGCTGTCTTTACTACTTCATCTCACCCAAGTCCC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTCAGAAGTTCTCGTGTTaGCATGAACATCACCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCQKFSC*HEHHLR Trigger: ACGGAGGTGATGTTCATGGCAACACGAGAACTTCTG...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTTCCCAGTCCCTGAAATaGATCTTCATCTTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCSQSLK*IFIFIQ Trigger: CTGGATGAAGATGAAGATGCATTTCAGGGACTGGGA...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGCAAAGAGCCCTCAAATaGCACTGGCTTATAGGCGTG | + |
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Preference number: 5 (lower is better) Translates to: GRLALQLFKPRPLAAWERQRALK*HWLIGV Trigger: CACGCCTATAAGCCAGTGCAATTTGAGGGCTCTTTG...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GGCAGGCTGGCCCTGCAATTATTCAAACCCAGGCCCCTGGCTGCCTGGGAACGGAACTCCTTAGTCTGGTaGATTGCTGAATGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GRLALQLFKPRPLAAWERNSLVW*IAEWER Trigger: CCTCTCCCATTCAGCAATCAACCAGACTAAGGAGTT...CCGTTCCCAGGCAGCCAGGGGCCTGGGTTTGAATAATTGCAGGGCCAGCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGCTTGGCCAGGGCTGCTaGGGGAATCCGCAGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLLGQGC*GNPQKF Trigger: GAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAG...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGCGGACACAGAATCTGTaGGGTGAAGCTGGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLRTQNL*GEAGYS Trigger: GCTGTACCCAGCTTCACCCAACAGATTCTGTGTCCG...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS CCA 90 bp | GACACTAGGTTTGTAGGTATAGAGATTGGCTTGGCCAGGGCTGCTTaGGGAATCCGCAGAAGTTCTCGTGTTGCCATGAACATCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: DTRFVGIEIGLARAA*GIRRSSRVAMNITS Trigger: GGAGGTGATGTTCATGGCAACACGAGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACAAACCTAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAGTGACAGGCCAAACTaGTTCTGGAGCACAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLSDRPN*FWSTAV Trigger: CACTGCTGTGCTCCAGAACAAGTTTGGCCTGTCACT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | ACAGCTGGTGGAGCCTGGGGTTACAGCATGGGAAGAAATGGAGATGGAGAACAGATTAAAAACACTCCATaGGTGATGGCAGCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAGGAWGYSMGRNGDGEQIKNTP*VMAAVQ Trigger: CTGCACTGCTGCCATCACCAATGGAGTGTTTTTAAT...CTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTCCACCAGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAGGTACAGGACACATTaGGAGATCTTTTATCGTATC | + |
|
Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLRYRTH*EIFYRI Trigger: GATACGATAAAAGATCTCCAAATGTGTCCTGTACCT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GGGGAAAGGCTCAAGTACCCTGTAGTTGTAGCAGGAAAAAGACATAACCATGTGCCACAAGACTTTGCTTaGGGGAAAAAGCTACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GERLKYPVVVAGKRHNHVPQDFA*GKKLPS Trigger: GGAAGGTAGCTTTTTCCCCAAAGCAAAGTCTTGTGG...CACATGGTTATGTCTTTTTCCTGCTACAACTACAGGGTACTTGAGCCTTTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAGACATAACCATGTGTaGTTTCGATTAAGGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLRHNHV*FRLRWT Trigger: TGTCCACCTTAATCGAAACAACACATGGTTATGTCT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | TGGTCAGTAGACAACGGTAGAGGGAAGCTAGGTAACATCACTGGGGAACAGCTGAATACATCAGCTGGTTaGTGTTTAGAAGAGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: WSVDNGRGKLGNITGEQLNTSAG*CLEEVM Trigger: CATTACCTCTTCTAAACACAAACCAGCTGATGTATT...CAGCTGTTCCCCAGTGATGTTACCTAGCTTCCCTCTACCGTTGTCTACTGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS GCA 90 bp | ATTGAATTGATCAATCTCTTCATCTTCTTCTCCCAGTCCCTGAAATaGATCTTCATCTTCATCCAGAGGACAATCCTCCAAAGACTCGTA | + |
|
Preference number: 5 (lower is better) Translates to: IELINLFIFFSQSLK*IFIFIQRTILQRLV Trigger: TACGAGTCTTTGGAGGATTGTCCTCTGGATGAAGATGAAGATGCATTTCAGGGACTGGGAGAAGAAGATGAAGAGATTGATCAATTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTGAACTAGCTGCAGTTTaGTCTCCAGCAAGTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCELAAV*SPASSV Trigger: AACTGAACTTGCTGGAGACAAAACTGCAGCTAGTTC...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GGACAGCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAACTTCCATGGTTACATTaGGAAGTTTCTATTCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLVLTEDLTVVQYMYVQLPWLH*EVSIHD Trigger: GTCATGAATAGAAACTTCCAAATGTAACCATGGAAG...TTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGCTGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTTAACAGAGGATCTTACTGTTGTACAATACATGTATGTGCAAAATGTCAGAGGATCTTACTGTaGTACAATACATGTATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGFNRGSYCCTIHVCAKCQRILL*YNTCMC Trigger: GCACATACATGTATTGTACAACAGTAAGATCCTCTG...ACATTTTGCACATACATGTATTGTACAACAGTAAGATCCTCTGTTAAAACCAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS GCA 72 bp | CAGGGCTGCTTGGGGAATCCGCAGAAGTTCTCGTGTTaGCATGAACATCACCTCCGTCCACTGATTATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGCLGNPQKFSC*HEHHLRPLIIL Trigger: CAAAATAATCAGTGGACGGAGGTGATGTTCATGGCAACACGAGAACTTCTGCGGATTCCCCAAGCAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS CCA 72 bp | TTTGTAGGTATAGAGATTGGCTTGGCCAGGGCTGCTTaGGGAATCCGCAGAAGTTCTCGTGTTGCCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FVGIEIGLARAA*GIRRSSRVAMN Trigger: GTTCATGGCAACACGAGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS CAA 72 bp | GTTTGTAGGTATAGAGATTGGCTTGGCCAGGGCTGCTaGGGGAATCCGCAGAAGTTCTCGTGTTGCCATGAA | + |
|
Preference number: 6 (lower is better) Translates to: VCRYRDWLGQGC*GNPQKFSCCHE Trigger: TTCATGGCAACACGAGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS CAA 72 bp | AAGAGGGACACTAGGTTTGTAGGTATAGAGATTGGCTaGGCCAGGGCTGCTTGGGGAATCCGCAGAAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRDTRFVGIEIG*ARAAWGIRRSS Trigger: AGAACTTCTGCGGATTCCCCAAGCAGCCCTGGCCAAGCCAATCTCTATACCTACAAACCTAGTGTCCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS TCA 72 bp | CTGCTTGGGGAATCCGCAGAAGTTCTCGTGTTGCCATaGACATCACCTCCGTCCACTGATTATTTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLGESAEVLVLP*TSPPSTDYFVL Trigger: CAACACAAAATAATCAGTGGACGGAGGTGATGTTCATGGCAACACGAGAACTTCTGCGGATTCCCCAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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| CDS GCA 72 bp | ATCAATCTCTTCATCTTCTTCTCCCAGTCCCTGAAATaGATCTTCATCTTCATCCAGAGGACAATCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: INLFIFFSQSLK*IFIFIQRTILQ Trigger: TTGGAGGATTGTCCTCTGGATGAAGATGAAGATGCATTTCAGGGACTGGGAGAAGAAGATGAAGAGATTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300146.10 |
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