RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PATJ (Homo sapiens)

Ensembl gene IDs: ENSG00000132849

Ensembl transcript IDs: ENST00000307297.8, ENST00000316485.11, ENST00000371158.6, ENST00000459752.5, ENST00000465798.2, ENST00000472512.2, ENST00000484562.5, ENST00000484937.5, ENST00000493967.1, ENST00000494842.2, ENST00000613764.4, ENST00000635023.1, ENST00000635137.1, ENST00000635214.1, ENST00000642238.2, ENST00000646453.1

Found 1382 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGCCAGCTTTCTTCTGCAGATCCACAG +
Preference number: 1 (lower is better)
Translates to: GRSQLPQHVFTVSQR*SGPGPGQLSSADPQ
Trigger: CTGTGGATCTGCAGAAGAAAGCTGGCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp AATCATTTCCTGTCCAGGGACAATGGGACACGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACCACCATAGCCTGTGAAGTCTGCATC +
Preference number: 1 (lower is better)
Translates to: NHFLSRDNGTRCGVH*QRSLETTIACEVCI
Trigger: GATGCAGACTTCACAGGCTATGGTGGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGGAAATGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 90 bp GCCATACGGCTGTGCCTCCTGGGAATAGACAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGGTTCATTATCATGCAACCACTGTGT +
Preference number: 1 (lower is better)
Translates to: AIRLCLLGIDSPPGS*LLRLGWFIIMQPLC
Trigger: ACACAGTGGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAGGAGGCACAGCCGTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp CAGGTTTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTaGTGGCGATGGTCTTCCTGTTGCACCTGGCCAGCTGTGGCAGTA +
Preference number: 1 (lower is better)
Translates to: QVLSGEKQPRFGRKS*WRWSSCCTWPAVAV
Trigger: TACTGCCACAGCTGGCCAGGTGCAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
3UTR TCA 90 bp TCTCCAACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTaGATCATGGCAATAAATACGGGGATATCTCCTAAGGGACTTCCT +
Preference number: 1 (lower is better)
Translates to: SPTLSFCVRAATPLA*IMAINTGISPKGLP
Trigger: AGGAAGTCCCTTAGGAGATATCCCCGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR CCA 90 bp ACCACTGTGTACCAAAGTGAAGTTCATTCACAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTG +
Preference number: 1 (lower is better)
Translates to: TTVYQSEVHSQRAQE*PLECATRDTTPWMV
Trigger: CACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTGTGAATGAACTTCACTTTGGTACACAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp TTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTCCAGGTAATAGTCCCCCACTTCTTT +
Preference number: 1 (lower is better)
Translates to: FPQLQQVRCCPNSIH*LRPGGLQVIVPHFF
Trigger: AAAGAAGTGGGGGACTATTACCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp AGCAGGTCCTTCCGGGTTAATTCCCACCACAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTT +
Preference number: 1 (lower is better)
Translates to: SRSFRVNSHHKYAHA*SVFITSKAESKSIL
Trigger: AAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAAGACCGATCACGCATGAGCATATTTGTGGTGGGAATTAACCCGGAAGGACCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 90 bp GGGCGAACCAAGGTGGTAGCCTGTAGACATGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGTATCTGCTACAACCTGCAGGATAAT +
Preference number: 1 (lower is better)
Translates to: GRTKVVACRHVFKLS*YGAYIGICYNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACAGGCTACCACCTTGGTTCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR TCA 90 bp GAAGATGGAGAACTTGATGGCACTGGAAAGGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTTCTGATGAAAACCAGCTTGACCTTT +
Preference number: 1 (lower is better)
Translates to: EDGELDGTGKGVTAI*LTASSFLMKTSLTF
Trigger: AAAGGTCAAGCTGGTTTTCATCAGAAACGAGGATGCAGTCAATCAGATGGCCGTTACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 90 bp CTGGGAATAGACAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATaGTTCATTATCATGCAACCACTGTGTACCAAAGTGAAGTTCATT +
Preference number: 1 (lower is better)
Translates to: LGIDSPPGSCLLRLG*FIIMQPLCTKVKFI
Trigger: AATGAACTTCACTTTGGTACACAGTGGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 90 bp TTTACATTAGGCTTTCTCTTTCAGTGTTCACAGGCATCAGAGCTCTaGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCG +
Preference number: 1 (lower is better)
Translates to: FTLGFLFQCSQASEL*MKKADPNSHSTSLP
Trigger: CGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAGAGCTCTGATGCCTGTGAACACTGAAAGAGAAAGCCTAATGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp CACAGGGTTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTACTCCAGACACCTCAAGTATTTTATC +
Preference number: 1 (lower is better)
Translates to: HRVSCILNGLNCFAV*GILQIYSRHLKYFI
Trigger: GATAAAATACTTGAGGTGTCTGGAGTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAACCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 90 bp GTCATCTGCAGCTGCTCCCTTTGCAAATACAGTCTTGACATAAATTaGCAGGTCTCCATGGGGACTTCCATAACCCCCTACAATACTAAA +
Preference number: 1 (lower is better)
Translates to: VICSCSLCKYSLDIN*QVSMGTSITPYNTK
Trigger: TTTAGTATTGTAGGGGGTTATGGAAGTCCCCATGGAGACCTGCCAATTTATGTCAAGACTGTATTTGCAAAGGGAGCAGCTGCAGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR CCA 90 bp GCACAGGAGTGGCCTCTTGAATGTGCGACAAGGGATACAACTCCATaGATGGTGAGGGATCTTGATATAACTCATATTCTTCATCAACAA +
Preference number: 1 (lower is better)
Translates to: AQEWPLECATRDTTP*MVRDLDITHILHQQ
Trigger: TTGTTGATGAAGAATATGAGTTATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 90 bp AAAAGTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTaGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATG +
Preference number: 1 (lower is better)
Translates to: KSNPGSDFFAETGFK*GEATKVWKKELMAM
Trigger: CATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
3UTR TCA 90 bp TTTGCTAATGAATTAAGATTTTCCAGGTCGTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGATGGTACAGATGGTAGGGACTCCATG +
Preference number: 1 (lower is better)
Translates to: FANELRFSRSSNLPC*LFPSVDGTDGRDSM
Trigger: CATGGAGTCCCTACCATCTGTACCATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGACGACCTGGAAAATCTTAATTCATTAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 90 bp TCATATTCTTCATCAACAAGAATTTCTCTTTCTTCATCCATTTCCTaGAATCTAGGAGTCAGAAATTCATGCATCTCCCAGGCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: SYSSSTRISLSSSIS*NLGVRNSCISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCCTAGATTGCAGGAAATGGATGAAGAAAGAGAAATTCTTGTTGATGAAGAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTaGAAAACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTA +
Preference number: 1 (lower is better)
Translates to: LDASYFLGMVALINL*KTPILVIPSERTLL
Trigger: TAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp GAGGCAAAAATATCTTTTTGGAAAGGCAATTACGTATTAGTCATGTaGGCGGAGACAGAACCGATTATGACAAGTACTAGTTCTATCAAT +
Preference number: 1 (lower is better)
Translates to: EAKISFWKGNYVLVM*AETEPIMTSTSSIN
Trigger: ATTGATAGAACTAGTACTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTCCAAAAAGATATTTTTGCCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CCA 90 bp TTCCATGTTAATTTCCATGTCGAAGCAATGTTCTTGACCCAACATTaGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTT +
Preference number: 1 (lower is better)
Translates to: FHVNFHVEAMFLTQH*INLILDASYFLGMV
Trigger: AACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCAATGTTGGGTCAAGAACATTGCTTCGACATGGAAATTAACATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 90 bp TGCTTTAATCAACCTCTGCAAAACTCCGATCTTAGTAATTCCAAGTaGAAGAACCTTGCTAGTTGTTCTTACTCTGTACAGAAATATATC +
Preference number: 1 (lower is better)
Translates to: CFNQPLQNSDLSNSK*KNLASCSYSVQKYI
Trigger: GATATATTTCTGTACAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGTTTTGCAGAGGTTGATTAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 2 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNSPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACACAGGAGTGGCCTCTTaGATGTGCGACAAGGGATAC +
Preference number: 2 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNTGVAS*MCDKGY
Trigger: GTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGT...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCCA +
Preference number: 2 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTSYSGG*GRRIAP
Trigger: TGGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 2 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACACAAACTCTGAACAATaGACACCACAGGGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNTNSEQ*TPQGFL
Trigger: CAGGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGT...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCTGGGAGGCCGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFLGGRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCGGCCTCCCAG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACAGGGATACAACTCCATaGATGGTGAGGGATCTTGAT +
Preference number: 2 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNRDTTP*MVRDLD
Trigger: ATCAAGATCCCTCACCATCCATGGAGTTGTATCCCT...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCCA +
Preference number: 2 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMASYSGG*GRRIAP
Trigger: TGGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
3UTR-3UTR GCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 2 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTAFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCCAGCCTGGCCCACATaGGGAAGCTCCATCTCTACT +
Preference number: 2 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKPAWPT*GSSIST
Trigger: AGTAGAGATGGAGCTTCCCCATGTGGGCCAGGCTGG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CAA 90 bp CGGCTGTGCCTCCTGGGAATAGACAGTCCTCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATTATCATGCAACCACTGTGTACCAAA +
Preference number: 2 (lower is better)
Translates to: RLCLLGIDSPPGSCL*RLGWFIIMQPLCTK
Trigger: TTTGGTACACAGTGGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAGGAGGCACAGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: QSSRFLPLETRMVHYHATTVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGATGGTTCATTATCATaGAACCACTGTGTACCAAAG +
Preference number: 2 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPDGSLS*NHCVPK
Trigger: CTTTGGTACACAGTGGTTGCATGATAATGAACCATC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACA +
Preference number: 2 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQQRAQE*PLECAT
Trigger: TGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTG...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 2 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 2 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQKLLCP*GHSASL
Trigger: CAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR GCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGT +
Preference number: 2 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQIAIRL*LLGIDS
Trigger: ACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTAT...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 2 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 2 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371158.6
3UTR-3UTR CCA 90 bp GTAATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTCTTCCTGTTGCACCTaGCCAGCTGTGGCAGTAGTT +
Preference number: 2 (lower is better)
Translates to: VMIMLVSVTTQCGSHSWCSSCCT*PAVAVV
Trigger: AACTACTGCCACAGCTGGCCAGGTGCAACAGGAAGA...GCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
3UTR CAA 90 bp CTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: LQQINHIRVRQPIQR*PVNADNPISNFKLL
Trigger: CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGAACCTCGCCAACAGGTaGCAGGAACTGGGAAACATT +
Preference number: 2 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMANLANR*QELGNI
Trigger: AATGTTTCCCAGTTCCTGTCACCTGTTGGCGAGGTT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
3UTR-3UTR TCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACCACAGCTTCAGCAAGTaGGGTGTTGTCCAAACAGTA +
Preference number: 2 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNHSFSK*GVVQTV
Trigger: TACTGTTTGGACAACACCTCACTTGCTGAAGCTGTG...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACACCACAGGGTTTCCTaGATTCTTAATGGCCTCAAC +
Preference number: 2 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQHHRVS*ILNGLN
Trigger: GTTGAGGCCATTAAGAATGCAGGAAACCCTGTGGTG...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCCTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 2 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVALWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR CAA 90 bp ATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCTCCAGGTAATAGTCCCCCACTTCTT +
Preference number: 2 (lower is better)
Translates to: ISTASASEVLSKQYS*TETRRSPGNSPPLL
Trigger: AAGAAGTGGGGGACTATTACCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGCGACTGCTTGCTCATaGGTAACACCTTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKATACS*VTPSRV
Trigger: GACCCTGGAAGGTGTTACTCATGAGCAAGCAGTCGC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371158.6
3UTR-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGAACTCCTGACCTCATaGTTCGCCTGCCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSELLTS*FACPGL
Trigger: GAGGCCAGGGCAGGCGAATCATGAGGTCAGGAGTTC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp GTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGTTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 2 (lower is better)
Translates to: VIILGGGVSVSSGWCSAVLTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...CACTGCTGAACACCATCCAGAAGACACAGAAACACCTCCACCTAAGATTATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR TCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTTGCTCCCTCCTTTaGGCCACAACAGGAAGGTCA +
Preference number: 2 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLSCSLL*ATTGRS
Trigger: TGACCTTCCTGTTGTGGCTCAAAGGAGGGAGCAAGA...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 2 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371158.6
3UTR-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGGTTCATTTGCTCAGTaGTATGCATTTATATGGCAC +
Preference number: 2 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTGSFAQ*YAFIWH
Trigger: GTGCCATATAAATGCATACCACTGAGCAAATGAACC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTCTGTGTCTTCTGGATaGTGTTCAGCAGTGGGCGAA +
Preference number: 2 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVSVSSG*CSAVGE
Trigger: TTCGCCCACTGCTGAACACCATCCAGAAGACACAGA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGCAGGCAGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQGRQIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCTGCCTGCC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp GTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGCCACTCCGCTAGCCTaGATCATGGCAATAAATACG +
Preference number: 2 (lower is better)
Translates to: VIILGGGVSVSSGWCSAVATPLA*IMAINT
Trigger: CGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGC...CACTGCTGAACACCATCCAGAAGACACAGAAACACCTCCACCTAAGATTATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 2 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMADMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR TCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACTATTACCAGCAAGGCTaGGTCCAAGTCCATTCTTAT +
Preference number: 2 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNYYQQG*VQVHSY
Trigger: ATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATA...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 2 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 2 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 2 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR GCA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 2 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp AGACAGCCCATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 2 (lower is better)
Translates to: RQPIQRLPVNADNPISNFVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCCCATAGGAGAATCTaGTATTTCATCTTGGGGATC +
Preference number: 2 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSHRRI*YFILGI
Trigger: GATCCCCAAGATGAAATACCAGATTCTCCTATGGGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCTGATCTCTGCCGTGTaGTTCTGGGGCTTCTACCTC +
Preference number: 2 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPLISAV*FWGFYL
Trigger: GAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 2 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
3UTR CAA 90 bp TTTTCTTGGGTGTCCTGGTTCTGGTTACCGGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATGACTCGTGGAGTGGATGACAAACTC +
Preference number: 2 (lower is better)
Translates to: FSWVSWFWLPVILLA*LCTLGMTRGVDDKL
Trigger: GAGTTTGTCATCCACTCCACGAGTCATTCCTAACGTACATAACAAGGCCAACAAAATCACCGGTAACCAGAACCAGGACACCCAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGCGACTGCTTGCTCATaGGTAACACCTTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTATACS*VTPSRV
Trigger: GACCCTGGAAGGTGTTACTCATGAGCAAGCAGTCGC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
3UTR-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGGCAGGCAGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSGRQIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCTGCCTGCC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGCACTGTGTACCAAAGTaGAGTTCATTCACAGAGGGC +
Preference number: 2 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLHCVPK*SSFTEG
Trigger: GCCCTCTGTGAATGAACTTCACTTTGGTACACAGTG...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGTTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 2 (lower is better)
Translates to: TPILVIPSERTLLVVLTLFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCTGGGAGGCCGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNLGGRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCGGCCTCCCAG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCTTGCAGTCCATGCTaGTGGCCTGACTACTATGGA +
Preference number: 2 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSCSPC*WPDYYG
Trigger: TCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTGCAGCTGCTCCCTTTaGAAATACAGTCTTGACATA +
Preference number: 2 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMACSCSL*KYSLDI
Trigger: TATGTCAAGACTGTATTTGCAAAGGGAGCAGCTGCA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 2 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGGCAGGCAGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSGRQIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCTGCCTGCC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAACCGAGGGGTGGGAATaGTGCCTGCCAACTGAAATG +
Preference number: 2 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLTEGWE*CLPTEM
Trigger: CATTTCAGTTGGCAGGCATCATTCCCACCCCTCGGT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTCATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 2 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCCGTCATCTGCAGCTaGTCCCTTTGCAAATACAGT +
Preference number: 2 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQAVICS*SLCKYS
Trigger: ACTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR CCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 2 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVSGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCAGTCCATGCTGCTaGCCTGACTACTATGGAGGT +
Preference number: 2 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSCSPCC*PDYYGG
Trigger: ACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAATCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 2 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGCTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAACAACATCTATCTTGTaGTCAGGCCCGAGGCTCATG +
Preference number: 2 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSTTSIL*SGPRLM
Trigger: CATGAGCCTCGGGCCTGATCACAAGATAGATGTTGT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
3UTR-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAACCTCGCCAACAGGTaGCAGGAACTGGGAAACATT +
Preference number: 2 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSNLANR*QELGNI
Trigger: AATGTTTCCCAGTTCCTGTCACCTGTTGGCGAGGTT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGGGTTCTGGTTACCGGTaGTTTTGTTGGCCTTGTTAT +
Preference number: 2 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLGSGYR*FCWPCY
Trigger: ATAACAAGGCCAACAAAATCACCGGTAACCAGAACC...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 2 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR GCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATTCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 2 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGCAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCTGCCGTGTGGTTCTaGGGCTTCTACCTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSAVWF*GFYLLF
Trigger: GAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCTGCCGTGTGGTTCTaGGGCTTCTACCTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSAVWF*GFYLLF
Trigger: GAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCTGATCTCTGCCGTGTaGTTCTGGGGCTTCTACCTC +
Preference number: 2 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNLISAV*FWGFYL
Trigger: GAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGCTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 2 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLLLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CAA 90 bp TTTATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCAACAATTCTCGGTGGACCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: FITVCPPTILIPRDT*GSLKISTILGGPQW
Trigger: CCACTGGGGTCCACCGAGAATTGTTGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTCTAGTTCAACAATCTTaGCTTCAGGGGACCACAGTG +
Preference number: 2 (lower is better)
Translates to: LDASYFLGMVALINLCKTLVQQS*LQGTTV
Trigger: CACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAG...AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTTTCTGTCCATTGGATaGGATCTGAGGTTGCTGTTA +
Preference number: 2 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPFLSIG*DLRLLL
Trigger: TAACAGCAACCTCAGATCTCATCCAATGGACAGAAA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCACACCTAGACCTTGTCTaGCTTGAGACAAAACTTGCT +
Preference number: 2 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSHLDLV*LETKLA
Trigger: AGCAAGTTTTGTCTCAAGTCAGACAAGGTCTAGGTG...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR GCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 2 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR GCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 2 (lower is better)
Translates to: TPILVIPSERTLLVVLTLFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CAA 90 bp TTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTTCTAAAACTTGTTaGATGAATATACCTTTAAGCTCCTCTCCATTCTTTAGACGTTTT +
Preference number: 2 (lower is better)
Translates to: LSAFVFPAGLSSKTC*MNIPLSSSPFFRRF
Trigger: AAAACGTCTAAAGAATGGAGAGGAGCTTAAAGGTATATTCATCAAACAAGTTTTAGAAGACAGTCCAGCAGGGAAGACGAACGCACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTTCTGTCCATTGGATaGGATCTGAGGTTGCTGTTA +
Preference number: 2 (lower is better)
Translates to: IQTFSSFILPGLLPSHANFLSIG*DLRLLL
Trigger: TAACAGCAACCTCAGATCTCATCCAATGGACAGAAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATATGATGCCTGCCAACTaGAATGCCATTAATTCCAGG +
Preference number: 2 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNMMPAN*NAINSR
Trigger: CCTGGAATTAATGGCATTTCAGTTGGCAGGCATCAT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR TCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGATGGTAGGGACTCCATaGCAAAATTTTCTTTCATCA +
Preference number: 2 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSMVGTP*QNFLSS
Trigger: TGATGAAAGAAAATTTTGTCATGGAGTCCCTACCAT...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTTTGTTTCTGTCCATTaGATGAGATCTGAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTFVSVH*MRSEVA
Trigger: AGCAACCTCAGATCTCATCCAATGGACAGAAACAAA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CAA 90 bp TTGACCCAACATTGGATAAATCTCATTCTTGATGCTAGCTATTTCTaGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTCCGATCTTA +
Preference number: 2 (lower is better)
Translates to: LTQHWINLILDASYF*GMVALINLCKTPIL
Trigger: TAAGATCGGAGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCAATGTTGGGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 2 (lower is better)
Translates to: TPILVIPSERTLLVVLTLGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR TCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCCGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 2 (lower is better)
Translates to: WINLILDASYFLGMVALIRVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATATTTGCTCAGTGGTATaGATTTATATGGCACAGAAA +
Preference number: 2 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDICSVV*IYMAQK
Trigger: TTTCTGTGCCATATAAATGCATACCACTGAGCAAAT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATTTGTTTCTGTCCATTaGATGAGATCTGAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLFVSVH*MRSEVA
Trigger: AGCAACCTCAGATCTCATCCAATGGACAGAAACAAA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGGTTCATTTGCTCAGTaGTATGCATTTATATGGCAC +
Preference number: 2 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLGSFAQ*YAFIWH
Trigger: GTGCCATATAAATGCATACCACTGAGCAAATGAACC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CAA 90 bp CGAAAAGCAATGTTCCATGTTAATTTCCATGTCGAAGCAATGTTCTaGACCCAACATTGGATAAATCTCATTCTTGATGCTAGCTATTTC +
Preference number: 2 (lower is better)
Translates to: RKAMFHVNFHVEAMF*TQHWINLILDASYF
Trigger: GAAATAGCTAGCATCAAGAATGAGATTTATCCAATGTTGGGTCAAGAACATTGCTTCGACATGGAAATTAACATGGAACATTGCTTTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR GCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 2 (lower is better)
Translates to: WINLILDASYFLGMVALISSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 3 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 72 bp CAACTCCCACAGCACGTCTTTACCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGCCAGCTTTCTTCTGCA +
Preference number: 3 (lower is better)
Translates to: QLPQHVFTVSQR*SGPGPGQLSSA
Trigger: TGCAGAAGAAAGCTGGCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp CTGTCCAGGGACAATGGGACACGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACCACCATAGCCTGTGAA +
Preference number: 3 (lower is better)
Translates to: LSRDNGTRCGVH*QRSLETTIACE
Trigger: TTCACAGGCTATGGTGGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 3 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 3 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCCTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPLFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 3 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACTTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 3 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 72 bp CTGTGCCTCCTGGGAATAGACAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGGTTCATTATCATGCAA +
Preference number: 3 (lower is better)
Translates to: LCLLGIDSPPGS*LLRLGWFIIMQ
Trigger: TTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAGGAGGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 72 bp GGCTTTCTCTTTCAGTGTTCACAGGCATCAGAGCTCTaGATGAAAAAGGCAGATCCCAACTCCCACAGCACG +
Preference number: 3 (lower is better)
Translates to: GFLFQCSQASEL*MKKADPNSHST
Trigger: CGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAGAGCTCTGATGCCTGTGAACACTGAAAGAGAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 3 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNEQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp TTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTaGATCATGGCAATAAATACGGGGATATCTCCTAAG +
Preference number: 3 (lower is better)
Translates to: LSFCVRAATPLA*IMAINTGISPK
Trigger: CTTAGGAGATATCCCCGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR TCA 72 bp CTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTCCAGGTAATAGTCCCC +
Preference number: 3 (lower is better)
Translates to: LQQVRCCPNSIH*LRPGGLQVIVP
Trigger: GGGGACTATTACCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGACAACACCTCACTTGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 72 bp GACAATCCGATCTCCAACTTTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTGAATCATGGCAATAAA +
Preference number: 3 (lower is better)
Translates to: DNPISNFKLLCP*GHSASLNHGNK
Trigger: TTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGATCGGATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR CCA 72 bp GACAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATaGTTCATTATCATGCAACCACTGTGTACCAAAGTG +
Preference number: 3 (lower is better)
Translates to: DSPPGSCLLRLG*FIIMQPLCTKV
Trigger: CACTTTGGTACACAGTGGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp CTTCTACCTCCTTTTCCTAAGACCGAGGGGTGGGAATaGTGCCTGCCAACTGAAATGCCATTAATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: LLPPFPKTEGWE*CLPTEMPLIPG
Trigger: ACCTGGAATTAATGGCATTTCAGTTGGCAGGCATCATTCCCACCCCTCGGTCTTAGGAAAAGGAGGTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR TCA 72 bp TCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTACTCCAGACACCTCAAG +
Preference number: 3 (lower is better)
Translates to: SCILNGLNCFAV*GILQIYSRHLK
Trigger: CTTGAGGTGTCTGGAGTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp GAACTTGATGGCACTGGAAAGGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTTCTGATGAAAACCAGC +
Preference number: 3 (lower is better)
Translates to: ELDGTGKGVTAI*LTASSFLMKTS
Trigger: GCTGGTTTTCATCAGAAACGAGGATGCAGTCAATCAGATGGCCGTTACTCCCTTTCCAGTGCCATCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp TCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTaGGCACCAATAAATAGCGTGGGCTCCCAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: SFQTPHPHHLFL*APINSVGSQSL
Trigger: CAAGCTCTGGGAGCCCACGCTATTTATTGGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
3UTR GCA 72 bp GCTAAGTATGTTGCTCCCTTAGGTTCTTGCAGTCCATaGTGCTGGCCTGACTACTATGGAGGTAAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: AKYVAPLGSCSP*CWPDYYGGKGK
Trigger: TTTCCCTTTACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCAACATACTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR GCA 72 bp TGGCACTGGAAAGGGAGTAACGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAAAACCAGCTTGACCTT +
Preference number: 3 (lower is better)
Translates to: WHWKGSNGHLID*ILVSDENQLDL
Trigger: AAGGTCAAGCTGGTTTTCATCAGAAACGAGGATGCAGTCAATCAGATGGCCGTTACTCCCTTTCCAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 72 bp TACCAAAGTGAAGTTCATTCACAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACAAGGGATACAACTCCA +
Preference number: 3 (lower is better)
Translates to: YQSEVHSQRAQE*PLECATRDTTP
Trigger: TGGAGTTGTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTGTGAATGAACTTCACTTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 72 bp GCCACAACAGGAAGGTCAATGAGCAAGCTAGGACCTTaGACATCATTCGGGATCATGCCTAAATCCAGACTA +
Preference number: 3 (lower is better)
Translates to: ATTGRSMSKLGP*TSFGIMPKSRL
Trigger: TAGTCTGGATTTAGGCATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTCATTGACCTTCCTGTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 3 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQTSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAGTCGTCAAATCTGCCTaGTTGACTGTTTCCTTCAGT +
Preference number: 3 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQVVKSA*LTVSFS
Trigger: ACTGAAGGAAACAGTCAACAAGGCAGATTTGACGAC...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTCCCTTAGGTTCTaGCAGTCCATGCTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSCSLRF*QSMLLA
Trigger: GGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 3 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp TTCCGGGTTAATTCCCACCACAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGCAAGGCTGAGTCCAAG +
Preference number: 3 (lower is better)
Translates to: FRVNSHHKYAHA*SVFITSKAESK
Trigger: CTTGGACTCAGCCTTGCTGGTAATAAAGACCGATCACGCATGAGCATATTTGTGGTGGGAATTAACCCGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTGCTCCCTTAGGTTCTaGCAGTCCATGCTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: IQTFSSFILPGLLPSHANCSLRF*QSMLLA
Trigger: GGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 3 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAATCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 3 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQSLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp AGTGGCATATCTAGAAGACAACATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCGTGTCGCTTGGTGTTG +
Preference number: 3 (lower is better)
Translates to: SGISRRQHSCVC*GLGNNSCRLVL
Trigger: CAACACCAAGCGACACGAGTTATTTCCAAGGCCTCAGCATACACAGGAATGTTGTCTTCTAGATATGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 72 bp AAGTATGTTGCTCCCTTAGGTTCTTGCAGTCCATGCTaGTGGCCTGACTACTATGGAGGTAAAGGGAAATAT +
Preference number: 3 (lower is better)
Translates to: KYVAPLGSCSPC*WPDYYGGKGKY
Trigger: ATATTTCCCTTTACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCAACATACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR GCA 72 bp AAGGTGGTAGCCTGTAGACATGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGTATCTGCTACAACCTG +
Preference number: 3 (lower is better)
Translates to: KVVACRHVFKLS*YGAYIGICYNL
Trigger: CAGGTTGTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACAGGCTACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR GCA 72 bp TTTCTTCTTCATTATCTTCCACCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTGGTGGCACAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: FLLHYLPPKAYR*QGVLGLVAQLS
Trigger: TGAAAGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGATAATGAAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGAGAATAAGGTTCATTaGCTCAGTGGTATGCATTTA +
Preference number: 3 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFENKVH*LSGMHL
Trigger: TAAATGCATACCACTGAGCAAATGAACCTTATTCTC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATAATATGTCACCCACTTaGCATAAGGCCAAGGCCACC +
Preference number: 3 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDNMSPT*HKAKAT
Trigger: GGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGGGTTTCATTTCTTCTaGGCTTGCCTGAGGTGTTCT +
Preference number: 3 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKGFHFF*ACLRCS
Trigger: AGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTCCAGGCCTCCTTGCTTaGCTCTATCTCTTTTTGTTG +
Preference number: 3 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSPGLLA*LYLFLL
Trigger: CAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTGG...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 3 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 3 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp CTTGTTATGTACGTTAGGAATGACTCGTGGAGTGGATaGCAAACTCTGAACAATGAACACCACAGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: LVMYVRNDSWSG*QTLNNEHHRVS
Trigger: GGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGTCATCCACTCCACGAGTCATTCCTAACGTACATAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp TGTGTCTTTTCCTCCCACAATGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTCTATAATCATTTCCTG +
Preference number: 3 (lower is better)
Translates to: CVFSSHNAETKP*TSLGYFYNHFL
Trigger: CAGGAAATGATTATAGAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAAAAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 72 bp TATGTTGCTCCCTTAGGTTCTTGCAGTCCATGCTGCTaGCCTGACTACTATGGAGGTAAAGGGAAATATAAT +
Preference number: 3 (lower is better)
Translates to: YVAPLGSCSPCC*PDYYGGKGKYN
Trigger: ATTATATTTCCCTTTACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CCA 72 bp ATCAGTCAGAGCTTTATAAGGAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTGCCTCTTTTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: ISQSFIRRRKFH*RWSSSLPLFFL
Trigger: AAGAAAGAAAAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTCCTTATAAAGCTCTGACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGACTTGAGACAAAACTaGCTGATCTCTGCCGTGTGG +
Preference number: 3 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSDLRQN*LISAVW
Trigger: CCACACGGCAGAGATCAGCAAGTTTTGTCTCAAGTC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAAT +
Preference number: 3 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTQPIQR*PVNADN
Trigger: ATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCTATGGCGCTTATATaGGTATCTGCTACAACCTGC +
Preference number: 3 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQAMALI*VSATTC
Trigger: GCAGGTTGTAGCAGATACCAATATAAGCGCCATAGC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
3UTR CCA 72 bp TGGCCTCTTGAATGTGCGACAAGGGATACAACTCCATaGATGGTGAGGGATCTTGATATAACTCATATTCTT +
Preference number: 3 (lower is better)
Translates to: WPLECATRDTTP*MVRDLDITHIL
Trigger: AAGAATATGAGTTATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAGAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp GAATTAAGATTTTCCAGGTCGTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGATGGTACAGATGGTAGG +
Preference number: 3 (lower is better)
Translates to: ELRFSRSSNLPC*LFPSVDGTDGR
Trigger: CCTACCATCTGTACCATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGACGACCTGGAAAATCTTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGTCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 3 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLSSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 3 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCACTAGGCTCAATTCATTaGCTCACTTTGCAGCTAAGT +
Preference number: 3 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSLGSIH*LTLQLS
Trigger: ACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAG...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGAGATCCTAACAACATaGCACATCTTGGATACATTA +
Preference number: 3 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKEILTT*HILDTL
Trigger: TAATGTATCCAAGATGTGCAATGTTGTTAGGATCTC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR GCA 72 bp TCTTGTGAACTGAAGGAGACTTTTGTTGGATATTTTTaGTGTTTCATCTGGCTGACAGCCAGTTTGAAGCTT +
Preference number: 3 (lower is better)
Translates to: SCELKETFVGYF*CFIWLTASLKL
Trigger: AAGCTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAAATATCCAACAAAAGTCTCCTTCAGTTCACAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 3 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGATCTGGTATTTCATCTaGGGGATCACTGGTAAATTA +
Preference number: 3 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQIWYFI*GITGKL
Trigger: TAATTTACCAGTGATCCCCAAGATGAAATACCAGAT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTCCTGAAAATTCAGTCTaGTCTTCATTACTGCTTGAA +
Preference number: 3 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSPENSV*SSLLLE
Trigger: TTCAAGCAGTAATGAAGACAAGACTGAATTTTCAGG...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp TGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATaGGATCCTAACAACATTGCACATCTTGGATACATT +
Preference number: 3 (lower is better)
Translates to: CSEGSSFSCTEE*DPNNIAHLGYI
Trigger: AATGTATCCAAGATGTGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
3UTR TCA 72 bp TCCATCTTCATAGCCTCTCAGCTTGTCAGTAAGTTCTaGGGCAAAAATATCTTTTTGGAAAGGCAATTACGT +
Preference number: 3 (lower is better)
Translates to: SIFIASQLVSKF*GKNIFLERQLR
Trigger: ACGTAATTGCCTTTCCAAAAAGATATTTTTGCCTCAGAACTTACTGACAAGCTGAGAGGCTATGAAGATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR GCA 72 bp CCAAGTCCATTCTTATCTTTTTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCTGCATATCTTTGTCTG +
Preference number: 3 (lower is better)
Translates to: PSPFLSFSSSIM*SSPGRSAYLCL
Trigger: CAGACAAAGATATGCAGATCTGCCTGGAGAACTGCACATTATTGAACTTGAAAAAGATAAGAATGGACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CCA 72 bp TGTAATGATTATGCTAGTCAGTGTTACGACCCAATGTaGGTCCCATTCGTGGTGCTATATTATAAAAGAACA +
Preference number: 3 (lower is better)
Translates to: CNDYASQCYDPM*VPFVVLYYKRT
Trigger: TGTTCTTTTATAATATAGCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
3UTR-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 3 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTCAGCAAGTGAGGTGTaGTCCAAACAGTATTCATTG +
Preference number: 3 (lower is better)
Translates to: WINLILDASYFLGMVALISASEV*SKQYSL
Trigger: CAATGAATACTGTTTGGACAACACCTCACTTGCTGA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 3 (lower is better)
Translates to: LDASYFLGMVALINLCKTFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR TCA 72 bp ATATCTTTTTGGAAAGGCAATTACGTATTAGTCATGTaGGCGGAGACAGAACCGATTATGACAAGTACTAGT +
Preference number: 3 (lower is better)
Translates to: ISFWKGNYVLVM*AETEPIMTSTS
Trigger: ACTAGTACTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTCCAAAAAGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR TCA 72 bp GACAAGGGATACAACTCCATGGATGGTGAGGGATCTTaGTATAACTCATATTCTTCATCAACAAGAATTTCT +
Preference number: 3 (lower is better)
Translates to: DKGYNSMDGEGS*YNSYSSSTRIS
Trigger: AGAAATTCTTGTTGATGAAGAATATGAGTTATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR GCA 72 bp AGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTaGAAAACTCCGATCTTAGTAATTCCAAGTGAAAGA +
Preference number: 3 (lower is better)
Translates to: SYFLGMVALINL*KTPILVIPSER
Trigger: TCTTTCACTTGGAATTACTAAGATCGGAGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAATCTGGTATTTCATCTaGGGGATCACTGGTAAATTA +
Preference number: 3 (lower is better)
Translates to: IPGDLPGLECNLALLEFRIWYFI*GITGKL
Trigger: TAATTTACCAGTGATCCCCAAGATGAAATACCAGAT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 3 (lower is better)
Translates to: WINLILDASYFLGMVALIIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: WINLILDASYFLGMVALIFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCATATATCAGTCTGGATaGATTGGACTTGGAGTTCTA +
Preference number: 3 (lower is better)
Translates to: WINLILDASYFLGMVALIIYQSG*IGLGVL
Trigger: TAGAACTCCAAGTCCAATCAATCCAGACTGATATAT...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTTCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSKLLCP*GHSASL
Trigger: CAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTT...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCACCCTGACTGTTCTGTaGTGTCGTCCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLTLTVL*CRPCGG
Trigger: ACCTCCGCAAGGACGACATCACAGAACAGTCAGGGT...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCCTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCTGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTTTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSLTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTG +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSMTAAV*TLLTTL
Trigger: CAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCAT...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCGATGGTGTTCAGCAGTaGGCGAACCAAGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVDGVQQ*ANQGGS
Trigger: GCTACCACCTTGGTTCGCCCACTGCTGAACACCATC...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCGCCACTCCGCTAGCCTaGATCATGGCAATAAATACG +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLATPLA*IMAINT
Trigger: CGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGC...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCTCTGTGTCTTCTGGATaGTGTTCAGCAGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLSVSSG*CSAVGE
Trigger: TTCGCCCACTGCTGAACACCATCCAGAAGACACAGA...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAGGTGAAAGCTGCCTaGAAAACTATGCCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSQVKAA*KTMPEK
Trigger: CTTCTCCGGCATAGTTTTCCAGGCAGCTTTCACCTG...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTGGAGCGAAGGAGGGATaGCAGCTGCTGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFGAKEG*QLLCAL
Trigger: GAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCC...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATTCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLFVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGAA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCCTGCCTGGAAAACTATaGCGGAGAAGCAAAATCCCT +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLLPGKL*RRSKIP
Trigger: AGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAG...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCCGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: QSSRFLPLETRMVHYHATRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTASASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCCAAGCCTCAGAGTGTaGATAGGCAGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNPSLRV*IGSSFE
Trigger: TTCAAAGCTGCTGCCTATTCACACTCTGAGGCTTGG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCTTTCTGGGAAGGATCTaGAACTCTTTTTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLFLGRI*NSFCAN
Trigger: GTTGGCACAAAAAGAGTTTCAGATCCTTCCCAGAAA...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCCTGAAACTCTTTTTGTaGCAACCAGGTTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVLKLFL*QPGFAG
Trigger: GCCTGCAAAACCTGGTTGGCACAAAAAGAGTTTCAG...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGTACTGCTTTTTGTGTaGACTGGTTCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPVLLFV*TGSLAT
Trigger: TGTGGCCAGGGAACCAGTCCACACAAAAAGCAGTAC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACTCCAAGGCCTCCAGTTaGAGGCCGTTCTATATCTAT +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNSKASS*RPFYIY
Trigger: ATAGATATAGAACGGCCTTCAACTGGAGGCCTTGGA...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCTAGTTCAACAATCTTaGCTTCAGGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNLVQQS*LQGTTV
Trigger: CACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGCTCGGTGTCGGCCCTaGCTCACCTGGGCGGAAGTG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKARCRP*LTWAEV
Trigger: CACTTCCGCCCAGGTGAGGCAGGGCCGACACCGAGC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR GCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAACCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPTVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGGT...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCCTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVLWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGCGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMARCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGACTCGTGGAGTGGATaGCAAACTCTGAACAATGAA +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPDSWSG*QTLNNE
Trigger: TTCATTGTTCAGAGTTTGTCATCCACTCCACGAGTC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCACCCTGACTGTTCTGTaGTGTCGTCCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTTLTVL*CRPCGG
Trigger: ACCTCCGCAAGGACGACATCACAGAACAGTCAGGGT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGGCAGGCAGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTGRQIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCTGCCTGCC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp GTAGGCGTTCTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGCTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGVLQQINHIRVRQPIQRLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...CCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAGAACGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACGTGTCACCCTTCTCCTaGAATTTCATTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNVSPFS*NFIFRR
Trigger: TCGCCTGAAAATGAAATTGCAGGAGAAGGGTGACAC...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCGTTAGGTGTACCACCTaGCCTGCATTTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPVRCTT*PAFRNT
Trigger: AGTATTACGAAATGCAGGGCAGGTGGTACACCTAAC...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTASPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CCGATCTCCAACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTGAATGTGCCAACCAGGTTTTaGAGGCCAGTGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: PISNFKLLCPCGHSASLNVPTRF*RPVMTG
Trigger: TCCTGTCATCACTGGCCTGCAAAACCTGGTTGGCAC...ATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFKLLCP*GHSASL
Trigger: CAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTCTGGGAAACCCCCTTaGACCATTGTTGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFSGKPP*TIVVFP
Trigger: AGGGAACACAACAATGGTCCAAGGGGGTTTCCCAGA...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp TCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SHDGPLGPLLSNCLFNHSPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...GGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TATATTGGTATCTGCTACAACCTGCAGGATAATGCGCCCGTAGGCGTTCTTCAGACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: YIGICYNLQDNAPVGVLQTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...CTGAAGAACGCCTACGGGCGCATTATCCTGCAGGTTGTAGCAGATACCAATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp CCGATCTCCAACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTGAATCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: PISNFKLLCPCGHSASLNRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...ATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPSPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTTTAAGAAAGGAGACTaGTTCTCGGCGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPFKKGD*FSARFS
Trigger: GGAAAATCTCGCCGAGAAGCAGTCTCCTTTCTTAAA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTMTAAV*TLLTTL
Trigger: CAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCAT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATCAGCAGGTGAAAGCTaGCTGGAAAACTATGCCGGA +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLSAGES*LENYAG
Trigger: TCCGGCATAGTTTTCCAGGCAGCTTTCACCTGCTGA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACTTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR CCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTCAACCTCTTCAACATaGCCCCAACAAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPSTSST*PQQTVS
Trigger: TGAAACAGTTTGTTGGGGCCATGTTGAAGAGGTTGA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNLLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCTCCTCTGTGTCTTCTaGATGGTGTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLLCVF*MVFSSG
Trigger: CCCACTGCTGAACACCATCCAGAAGACACAGAGGAG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCCGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp GATCCCCTCGTTTTAATCGGCCGTCATCTGCAGCTGCTCCCTTTGCAAATACAGGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: DPLVLIGRHLQLLPLQIQAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...CTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGCCGATTAAAACGAGGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp CCGATCTCCAACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTGAATCACAGCTTCAGCAAGTaGGGTGTTGTCCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: PISNFKLLCPCGHSASLNHSFSK*GVVQTV
Trigger: TACTGTTTGGACAACACCTCACTTGCTGAAGCTGTG...ATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGATCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTTTCCAAGGGCATCACTaGGCTCCCTGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFFQGHH*APCLSQ
Trigger: TTGAGATAAACAGGGAGCTCAGTGATGCCCTTGGAA...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGGCGACTGCTTGCTCATaGGTAACACCTTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKATACS*VTPSRV
Trigger: GACCCTGGAAGGTGTTACTCATGAGCAAGCAGTCGC...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCGACTCCTCTCTCTTCTaGCGACCTTGGGCCTATTTT +
Preference number: 4 (lower is better)
Translates to: QPHTMAPWAHFSQTVFLIDSSLF*RPWAYF
Trigger: AAAATAGGCCCAAGGTCGTCAGAAGAGAGAGGAGTC...GATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTASSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTSSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: QPHTMAPWAHFSQTVFLILIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...GATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVFVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGAA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMASPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCACAGGCGCCTGCCACTaGACCCAGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTTGACH*TQLIFV
Trigger: TACAAAAATTAGCTGGGTGCAGTGGCAGGCGCCTGT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGCCGTCATCTGCAGCTaGTCCCTTTGCAAATACAGT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTAVICS*SLCKYS
Trigger: ACTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTTGCGATGGTCTTCCTGTTaGACCTGGCCAGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: GEATKVWKKELMAMVFLLRWSSC*TWPAVA
Trigger: TGCCACAGCTGGCCAGGTGCAACAGGAAGACCATCG...CAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGCTACACTCCCTGGCTaGACATCCTTCACGAAGATA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTATLPG*TSFTKI
Trigger: TATCTTCGTGAAGGATGTCCAGCCAGGGAGTGTAGC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCACAGGTTTTCCCATCTaGATTTCAGCTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPTGFPI*ISAHFL
Trigger: CAGAAAATGAGCTGAAATCCAGATGGGAAAACCTGT...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCCAAAGTAAAAGGGGGTaGCACTTCTTTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPQSKRG*HFFKKG
Trigger: TCCTTTCTTAAAGAAGTGCCACCCCCTTTTACTTTG...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTRRKFH*RWSSSL
Trigger: CAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCTCAGTCTGGATTGATTaGACTTGGAGTTCTATCTTG +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPSVWID*TWSSIL
Trigger: CAAGATAGAACTCCAAGTCCAATCAATCCAGACTGA...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCTGGGCTCCCAGAGCTTaGGGCCTTCGCAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTWAPRA*GLRSLT
Trigger: TGTGAGGCTGCGAAGGCCCCAAGCTCTGGGAGCCCA...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAGGGTATCTGCATTCCTaGCAAATATCCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLGYLHS*QISNAG
Trigger: TCCAGCATTGGATATTTGTCAGGAATGCAGATACCC...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACCATCTGTTGAATGACTaGGTTAAAGTCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNHLLND*VKVFIS
Trigger: GGAAATGAAGACTTTAACTCAGTCATTCAACAGATG...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAACAGTTCCTCTGTCTaGAGGTGGTTCAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTNSSSV*RWFKWR
Trigger: TCTCCACTTGAACCACCTTCAGACAGAGGAACTGTT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCTAGTTCAACAATCTTaGCTTCAGGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLVQQS*LQGTTV
Trigger: CACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAAACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQTVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTGCCTCAGGGCTGTGATGGCTTCTTCGTGGCTGGAGTTCCTCAGGTCAACCCCATGGTAGGGACTCCATaGCAAAATTTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LPQGCDGFFVAGVPQVNPMVGTP*QNFLSS
Trigger: TGATGAAAGAAAATTTTGTCATGGAGTCCCTACCAT...GGGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCTTGCTCCCTCCTTTaGGCCACAACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSCSLL*ATTGRS
Trigger: TGACCTTCCTGTTGTGGCTCAAAGGAGGGAGCAAGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTCACCACCTGTTTCTTTaGGCACCAATAAATAGCGTG +
Preference number: 4 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFHHLFL*APINSV
Trigger: CACGCTATTTATTGGTGCTCAAAGAAACAGGTGGTG...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVSPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTACAAATATCCAATGCTaGACGCAGCTCAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFTNIQC*TQLKSS
Trigger: TGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGT...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp TATATTGGTATCTGCTACAACCTGCAGGATAATGCGCCCGTAGGCGTTCTTCAGTGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: YIGICYNLQDNAPVGVLQWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...CTGAAGAACGCCTACGGGCGCATTATCCTGCAGGTTGTAGCAGATACCAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAAGTTTCATTGGCGGTaGAGCAGTTCCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTKFHWR*SSSLPL
Trigger: AAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCCAGCCTGGCCCACATaGGGAAGCTCCATCTCTACT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKPAWPT*GSSIST
Trigger: AGTAGAGATGGAGCTTCCCCATGTGGGCCAGGCTGG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTCTGCCGTGTGGTTCTaGGGCTTCTACCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKSAVWF*GFYLLF
Trigger: GAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CCCCAAGCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: PQAFRAFLQSNNLRWRCFSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...GAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCCAGGCATCAGAGCTCTaGATGAAAAAGGCAGATCCC +
Preference number: 4 (lower is better)
Translates to: QSSRFLPLETRMVHYHATQASEL*MKKADP
Trigger: GGGATCTGCCTTTTTCATCCAGAGCTCTGATGCCTG...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCTCTCTGTGTCTTCTaGATGGTGTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHSLCVF*MVFSSG
Trigger: CCCACTGCTGAACACCATCCAGAAGACACAGAGAGA...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
3UTR CAA 72 bp CTCCTGGGAATAGACAGTCCTCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATTATCATGCAACCACTG +
Preference number: 4 (lower is better)
Translates to: LLGIDSPPGSCL*RLGWFIIMQPL
Trigger: CAGTGGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: QPHTMAPWAHFSQTVFLINHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...GATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAATTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: FPAFLMASTASLCEAFCKFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCAAGCCTCAGAGTGTaGATAGGCAGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFPSLRV*IGSSFE
Trigger: TTCAAAGCTGCTGCCTATTCACACTCTGAGGCTTGG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMATVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCACAAACTCTGAACAATaGACACCACAGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVATNSEQ*TPQGFL
Trigger: CAGGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGT...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCGACTCGTGGAGTGGATaGCAAACTCTGAACAATGAA +
Preference number: 4 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVADSWSG*QTLNNE
Trigger: TTCATTGTTCAGAGTTTGTCATCCACTCCACGAGTC...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGACCCTGACTGTTCTGTaGTGTCGTCCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKTLTVL*CRPCGG
Trigger: ACCTCCGCAAGGACGACATCACAGAACAGTCAGGGT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACGGAGCGAAGGAGGGATaGCAGCTGCTGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYGAKEG*QLLCAL
Trigger: GAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCC...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGGAGCGAAGGAGGGATaGCAGCTGCTGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKGAKEG*QLLCAL
Trigger: GAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTACAACATCTATCTTGTaGTCAGGCCCGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFTTSIL*SGPRLM
Trigger: CATGAGCCTCGGGCCTGATCACAAGATAGATGTTGT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAACTCCTGACCTCATaGTTCGCCTGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRELLTS*FACPGL
Trigger: GAGGCCAGGGCAGGCGAATCATGAGGTCAGGAGTTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTACGTATTAGTCATGTaGGCGGAGACAGAACCGATT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTYVLVM*AETEPI
Trigger: AATCGGTTCTGTCTCCGCTCACATGACTAATACGTA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATCCCTTCAGGGTATCTaGATTCCTGACAAATATCCA +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLSLQGI*IPDKYP
Trigger: TGGATATTTGTCAGGAATGCAGATACCCTGAAGGGA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTTCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPSISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVSPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCCTGAAACTCTTTTTGTaGCAACCAGGTTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVALKLFL*QPGFAG
Trigger: GCCTGCAAAACCTGGTTGGCACAAAAAGAGTTTCAG...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRKLLCP*GHSASL
Trigger: CAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGACACCTGGTGCGCTaGAGGAGCAGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTRHLVR*RSRWEP
Trigger: GGGCTCCCACCTGCTCCTCCAGCGCACCAGGTGTCT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAGACACCTGGTGCGCTaGAGGAGCAGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSRHLVR*RSRWEP
Trigger: GGGCTCCCACCTGCTCCTCCAGCGCACCAGGTGTCT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAGTCTGCTACACTCCCTaGCTGGACATCCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPVCYTP*LDILHE
Trigger: TTCGTGAAGGATGTCCAGCCAGGGAGTGTAGCAGAC...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAGCTGGTGGTTTCAGTaGTTCTACAACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTSWWFQ*FYNSSS
Trigger: AGAGGAACTGTTGTAGAACCACTGAAACCACCAGCT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp GATCCCCTCGTTTTAATCGGCCGTCATCTGCAGCTGCTCCCTTTGCAAATACAGGGTTTCAGTGCGCCTTaGTTCATCTACAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DPLVLIGRHLQLLPLQIQGFSAP*FIYRSF
Trigger: GAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACC...CTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGCCGATTAAAACGAGGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNRRKFH*RWSSSL
Trigger: CAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCT...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTCTGTGTCTTCTGGATaGTGTTCAGCAGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKSVSSG*CSAVGE
Trigger: TTCGCCCACTGCTGAACACCATCCAGAAGACACAGA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCAGGTGAAAGCTGCCTaGAAAACTATGCCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFQVKAA*KTMPEK
Trigger: CTTCTCCGGCATAGTTTTCCAGGCAGCTTTCACCTG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646453.1
3UTR CAA 72 bp GCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCTCCAGGTAATAGTCCC +
Preference number: 4 (lower is better)
Translates to: ASASEVLSKQYS*TETRRSPGNSP
Trigger: GGGACTATTACCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGACAACACCTCACTTGCTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACGTTGCGGGGTCCACTaGCAGAGGAGCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSRCGVH*QRSLET
Trigger: GGTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGCCAAGCCTCAGAGTGTaGATAGGCAGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAPSLRV*IGSSFE
Trigger: TTCAAAGCTGCTGCCTATTCACACTCTGAGGCTTGG...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCACTGTGTACCAAAGTaGAGTTCATTCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKHCVPK*SSFTEG
Trigger: GCCCTCTGTGAATGAACTTCACTTTGGTACACAGTG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKNCFAV*GILQIY
Trigger: GTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTT...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCACAAACTCTGAACAATaGACACCACAGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QSSRFLPLETRMVHYHATTNSEQ*TPQGFL
Trigger: CAGGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGT...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCGGTTCTGGTTACCGGTaGTTTTGTTGGCCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: QSSRFLPLETRMVHYHATGSGYR*FCWPCY
Trigger: ATAACAAGGCCAACAAAATCACCGGTAACCAGAACC...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 4 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHDMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAACTCCTGACCTCATaGTTCGCCTGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQELLTS*FACPGL
Trigger: GAGGCCAGGGCAGGCGAATCATGAGGTCAGGAGTTC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTATCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMASISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTAGTACCTGCAGCACCTaGAGTTTATCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSTCST*SLSVAG
Trigger: TCCTGCTACAGATAAACTGCAGGTGCTGCAGGTACT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACAGGCGATCAAGTACCTaGAGCACCTGCAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNRRSST*STCSLS
Trigger: AGATAAACTGCAGGTGCTGCAGGTACTTGATCGCCT...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGATAACTTCTCATTCTaGGACGTGTCACCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFDNFSF*DVSPFS
Trigger: GGAGAAGGGTGACACGTCGCAGAATGAGAAGTTATC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACCACCACAGGGTTTCCTaGATTCTTAATGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNHHRVS*ILNGLN
Trigger: GTTGAGGCCATTAAGAATGCAGGAAACCCTGTGGTG...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTGTGCCAACCAGGTTTTaGAGGCCAGTGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATVPTRF*RPVMTG
Trigger: TCCTGTCATCACTGGCCTGCAAAACCTGGTTGGCAC...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCTGGGAGGCCGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPLGGRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCGGCCTCCCAG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTGCAGCTGCTCCCTTTaGAAATACAGTCTTGACATA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTCSCSL*KYSLDI
Trigger: TATGTCAAGACTGTATTTGCAAAGGGAGCAGCTGCA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTGCCTGGAAAACTATaGCGGAGAAGCAAAATCCCT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLPGKL*RRSKIP
Trigger: AGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGCCCTCACCAGATGCTaGCTCCATGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSALTRC*LHALGL
Trigger: AAGTCCAAGAGCATGGAGCCAGCATCTGGTGAGGGC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTACCAGCCGCACCTTCTaGGGGGTCTGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSTSRTF*GVCLRA
Trigger: AGCCCTGAGGCAGACCCCCCAGAAGGTGCGGCTGGT...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATAGACACCTGGTGCGCTaGAGGAGCAGGTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANRHLVR*RSRWEP
Trigger: GGGCTCCCACCTGCTCCTCCAGCGCACCAGGTGTCT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCCAATCTTCAAGATGTaGTCCCCTGTCTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKPIFKM*SPVWSL
Trigger: AAGACTCCAGACAGGGGACCACATCTTGAAGATTGG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCAGCTGGTGGTTTCAGTaGTTCTACAACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QSSRFLPLETRMVHYHATSWWFQ*FYNSSS
Trigger: AGAGGAACTGTTGTAGAACCACTGAAACCACCAGCT...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGGATGGTGTTCAGCAGTaGGCGAACCAAGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: IQRLPVNADNPISNFKLLDGVQQ*ANQGGS
Trigger: GCTACCACCTTGGTTCGCCCACTGCTGAACACCATC...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAAACCTCCGGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQNLRSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCCGGAGGTT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTCTTCCTGTTGCACCTaGCCAGCTGTGGCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: FKWGEATKVWKKELMAMVSSCCT*PAVAVV
Trigger: AACTACTGCCACAGCTGGCCAGGTGCAACAGGAAGA...GACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGAGAAGCAAAATCCCTaGTTTCCCACATCAGACCCT +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFEKQNP*FPTSDP
Trigger: AGGGTCTGATGTGGGAAACCAGGGATTTTGCTTCTC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646453.1
3UTR CAA 72 bp ATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAATCCGATCTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: INHIRVRQPIQR*PVNADNPISNF
Trigger: AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGGGTATCTGCATTCCTaGCAAATATCCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFGYLHS*QISNAG
Trigger: TCCAGCATTGGATATTTGTCAGGAATGCAGATACCC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR TCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTACTTCTGTCACAGGATaGTGCAGCATGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSTSVTG*CSMKAL
Trigger: GAGGGCCTTCATGCTGCATCATCCTGTGACAGAAGT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAACCTGACTGTTCTGTaGTGTCGTCCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSNLTVL*CRPCGG
Trigger: ACCTCCGCAAGGACGACATCACAGAACAGTCAGGTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCATTTTGTCATTCACTTaGATGTGGCCATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTILSFT*MWPLWY
Trigger: GTACCACAATGGCCACATTCAAGTGAATGACAAAAT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTGGTTGGCAAAACCCTaGATGTTCACGCCATCGACA +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVWLAKP*MFTPST
Trigger: TGTCGATGGCGTGAACATTCAGGGTTTTGCCAACCA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR TCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGACAGGAGTGGCCTCTTaGATGTGCGACAAGGGATAC +
Preference number: 4 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLTGVAS*MCDKGY
Trigger: GTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGT...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGACCCTGACTGTTCTGTaGTGTCGTCCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKTLTVL*CRPCGG
Trigger: ACCTCCGCAAGGACGACATCACAGAACAGTCAGGGT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFDMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTACAACATCTATCTTGTaGTCAGGCCCGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATTTSIL*SGPRLM
Trigger: CATGAGCCTCGGGCCTGATCACAAGATAGATGTTGT...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESYSGG*GRRIAP
Trigger: TGGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGCTACTCGGGAGGCTaGGGCAGGAGAATCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSYSGG*GRRIAP
Trigger: TGGAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGGCAGGCAGATCACCTaGGGTCAGAAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKGRQIT*GQKFKT
Trigger: GGTCTTGAACTTCTGACCTCAGGTGATCTGCCTGCC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAACCGAGGGGTGGGAATaGTGCCTGCCAACTGAAATG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQTEGWE*CLPTEM
Trigger: CATTTCAGTTGGCAGGCATCATTCCCACCCCTCGGT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTTGCAAATACAGTCTTaGCATAAATTGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLQIQS*HKLAGL
Trigger: GAGACCTGCCAATTTATGTCAAGACTGTATTTGCAA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCCTGACAAATATCCAATaGTGGACGCAGCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: SHDGPLGPLLSNCLFNHSLTNIQ*WTQLKS
Trigger: GGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAG...GGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSFVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATTCGTTTCCCAACGATaGTCAGGCCCAGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLFVSQR*SGPGPG
Trigger: GCCGGGGCCTGGGCCTGAGCATCGTTGGGAAACGAA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGGTGTCACCCTTCTCCTaGAATTTCATTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKVSPFS*NFIFRR
Trigger: TCGCCTGAAAATGAAATTGCAGGAGAAGGGTGACAC...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAG +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAEERFQ*ALVHLQ
Trigger: CTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTC...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTCCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATPKAYR*QGVLGL
Trigger: CAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGG...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTCTCCCAGGCCTCCTTaGTTTGCTCTATCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKSPRPP*FALSLF
Trigger: AAAAAGAGATAGAGCAAAGCAAGGAGGCCTGGGAGA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCGTGCCAACCAGGTTTTaGAGGCCAGTGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTVPTRF*RPVMTG
Trigger: TCCTGTCATCACTGGCCTGCAAAACCTGGTTGGCAC...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTKLLCP*GHSASL
Trigger: CAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGCCGTCATCTGCAGCTaGTCCTCTGTGTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRAVICS*SSVSSG
Trigger: TCCAGAAGACACAGAGGAGCAGCTGCAGATGACGGC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR GCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCACTGGGAGGCCGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSLGGRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCGGCCTCCCAG...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTAAACTTGCTGATCTCTaGCGTGTGGTTCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATKLADL*RVVLGL
Trigger: AAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGATATGTCACCCACTTTaGATAAGGCCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAICHPL*IRPRPP
Trigger: AGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATAT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTCTTGCAGTCCATGCTaGTGGCCTGACTACTATGGA +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKSCSPC*WPDYYG
Trigger: TCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGGGATTACAGGCGCCTaGCACTGCACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKGITGA*HCTQLI
Trigger: AATTAGCTGGGTGCAGTGGCAGGCGCCTGTAATCCC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGGGATTACAGGCGCCTaGCACTGCACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQGITGA*HCTQLI
Trigger: AATTAGCTGGGTGCAGTGGCAGGCGCCTGTAATCCC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTATGACAGCTGCTGTGTaGACTCTGCTGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATMTAAV*TLLTDC
Trigger: ACAGTCAGTCAGCAGAGTGCACACAGCAGCTGTCAT...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTGCCGTCATCTGCAGCTaGTCCCTTTGCAAATACAGT +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATAVICS*SLCKYS
Trigger: ACTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGC...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGGAACTTTCTCCCAGTaGGGGCAGAAGAGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSGTFSQ*GQKSES
Trigger: TGACTCACTCTTCTGCCCCCACTGGGAGAAAGTTCC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR CCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTTATTAGAGGGCCTGTaGACATTTCCATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTALLEGL*TFPLVM
Trigger: CATCACTAATGGAAATGTCCACAGGCCCTCTAATAA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAATGTTCTGATCCAATaGCGTGTGATTAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTNVLIQ*RVINGQ
Trigger: TTGGCCATTAATCACACGCCATTGGATCAGAACATT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTGTACTGCTTTTTGTGTaGACTGGTTCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATVLLFV*TGSLAT
Trigger: TGTGGCCAGGGAACCAGTCCACACAAAAAGCAGTAC...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR CCA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAGTGCAACTTGCTCACTaGTCATTCCCTGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: FPAFLMASTASLCEAFCKVQLAH*SFPARL
Trigger: CAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCAC...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTAGCTGGTGGTTTCAGTaGTTCTACAACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSWWFQ*FYNSSS
Trigger: AGAGGAACTGTTGTAGAACCACTGAAACCACCAGCT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCACAGGTTTTCCCATCTaGATTTCAGCTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTTGFPI*ISAHFL
Trigger: CAGAAAATGAGCTGAAATCCAGATGGGAAAACCTGT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCCAAAGTAAAAGGGGGTaGCACTTCTTTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVAQSKRG*HFFKKG
Trigger: TCCTTTCTTAAAGAAGTGCCACCCCCTTTTACTTTG...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp TATATTGGTATCTGCTACAACCTGCAGGATAATGCGCCCGTAGGCGTTCTTCAGTGGGTGTCCTGGTTCTaGTTACCGGTGATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: YIGICYNLQDNAPVGVLQWVSWF*LPVILL
Trigger: CAACAAAATCACCGGTAACCAGAACCAGGACACCCA...CTGAAGAACGCCTACGGGCGCATTATCCTGCAGGTTGTAGCAGATACCAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp AAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCTGGGTGTCCTGGTTCTaGTTACCGGTGATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KWGEATKVWKKELMAMVFWVSWF*LPVILL
Trigger: CAACAAAATCACCGGTAACCAGAACCAGGACACCCA...GAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCATGGGTGTCCTGGTTCTaGTTACCGGTGATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPWVSWF*LPVILL
Trigger: CAACAAAATCACCGGTAACCAGAACCAGGACACCCA...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATCCAGCCTGGCCCACATaGGGAAGCTCCATCTCTACT +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDPAWPT*GSSIST
Trigger: AGTAGAGATGGAGCTTCCCCATGTGGGCCAGGCTGG...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACTGATCTCTGCCGTGTaGTTCTGGGGCTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQLISAV*FWGFYL
Trigger: GAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGAAATGGGAGTCTCCTTaGAGATCAGGAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKKWESP*RSGNIS
Trigger: GCTGATGTTTCCTGATCTCCAAGGAGACTCCCATTT...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTAACCTCCGGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPNLRSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCCGGAGGTT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTTGCATGTTACGACCCAATGTaGGTCCCATTCGTGGTGCTA +
Preference number: 4 (lower is better)
Translates to: RSNQGLEERVDGDGLPVACYDPM*VPFVVL
Trigger: TAGCACCACGAATGGGACCCACATTGGGTCGTAACA...TGCAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACCCACATCAGACCCTTaGATGCTTCACGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQPTSDP*MLHAAD
Trigger: GTCAGCAGCGTGAAGCATCCAAGGGTCTGATGTGGG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTATTACCAGCAAGGCTaGGTCCAAGTCCATTCTTAT +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFYYQQG*VQVHSY
Trigger: ATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGATCTGCCTCAGGGCTGTaGTGGCTTCTTCGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRSASGL*WLLRGW
Trigger: CCAGCCACGAAGAAGCCATCACAGCCCTGAGGCAGA...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAAGCCATCGACAACCTaGCTGTTCTGTGATGTCGTC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSKPSTT*LFCDVV
Trigger: GACGACATCACAGAACAGTCAGGTTGTCGATGGCTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTGCTTGATGGACTGCTaGAGTGTGAGTATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKCLMDC*SVSIWL
Trigger: CAACCAGATACTCACACTTCAGCAGTCCATCAAGCA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCATCTGTTGAATGACTaGGTTAAAGTCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTHLLND*VKVFIS
Trigger: GGAAATGAAGACTTTAACTCAGTCATTCAACAGATG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCTAGTTCAACAATCTTaGCTTCAGGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKLVQQS*LQGTTV
Trigger: CACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAACACAGCTTCAGCAAGTaGGGTGTTGTCCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: FPAFLMASTASLCEAFCKHSFSK*GVVQTV
Trigger: TACTGTTTGGACAACACCTCACTTGCTGAAGCTGTG...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTGATGGTGAGGGATCTTaGTATAACTCATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTADGEGS*YNSYSS
Trigger: TGAAGAATATGAGTTATATCAAGATCCCTCACCATC...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGACAGGAGTGGCCTCTTaGATGTGCGACAAGGGATAC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRTGVAS*MCDKGY
Trigger: GTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCCCGGTTCTTGCCTCTTaGGACTCGGATGGTTCATTA +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVPVLAS*DSDGSL
Trigger: TAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGG...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGTCTTGCTCCCTCCTTTaGGCCACAACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLSCSLL*ATTGRS
Trigger: TGACCTTCCTGTTGTGGCTCAAAGGAGGGAGCAAGA...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTCATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGGAGCGAAGGAGGGATaGCAGCTGCTGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRGAKEG*QLLCAL
Trigger: GAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTTTCTGTCCATTGGATaGGATCTGAGGTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFFLSIG*DLRLLL
Trigger: TAACAGCAACCTCAGATCTCATCCAATGGACAGAAA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGATGATGCCTGCCAACTaGAATGCCATTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAMMPAN*NAINSR
Trigger: CCTGGAATTAATGGCATTTCAGTTGGCAGGCATCAT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR TCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGAACTCCTGACCTCATaGTTCGCCTGCCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLELLTS*FACPGL
Trigger: GAGGCCAGGGCAGGCGAATCATGAGGTCAGGAGTTC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTATATCAGTCTGGATTaGTTGGACTTGGAGTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTAYISLD*LDLEFY
Trigger: ATAGAACTCCAAGTCCAATCAATCCAGACTGATATA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCCAGCAGTGGGCAAGGTaGATCCATTGGGCAATTACA +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTQQWAR*IHWAIT
Trigger: TGTAATTGCCCAATGGATTCACCTTGCCCACTGCTG...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp AGACAGCCCATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: RQPIQRLPVNADNPISNFFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TTTATTTATGTAATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATACGCATTCGTCCATCTaGGGCAGCAGGTCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: FIYVMIMLVSVTTQCGSHTHSSI*GSRSFR
Trigger: CCGGAAGGACCTGCTGCCGCAGATGGACGAATGCGT...ATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTACATAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR GCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTSSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGAGGCGATCAAGTACCTaGAGCACCTGCAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKRRSST*STCSLS
Trigger: AGATAAACTGCAGGTGCTGCAGGTACTTGATCGCCT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAATGTGGTACGCAGCACTaGCAGGTATTATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: LDEKGRSQLPQHVFTVSQCGTQH*QVLYFS
Trigger: TGAAAAGTATAATACCTGGCAGTGCTGCGTACCACA...TTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGCCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IQRLPVNADNPISNFKLLPKAYR*QGVLGL
Trigger: CAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGG...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCTGGGAGGCCGAGGTTaGAGTGAGCCAAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLGGRG*SEPRLR
Trigger: GCGCAATCTTGGCTCACTGCAACCTCGGCCTCCCAG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGATATGTCACCCACTTTaGATAAGGCCAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKICHPL*IRPRPP
Trigger: AGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATAT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCATTTCTTCTTGGCTTaGCTGAGGTGTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKHFFLA*LRCSCR
Trigger: CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCTGGGAAACCCCCTTaGACCATTGTTGTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSGKPP*TIVVFP
Trigger: AGGGAACACAACAATGGTCCAAGGGGGTTTCCCAGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTGTGGACTGGTTCCCTaGCCACAATCAGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLCGLVP*PQSVSK
Trigger: CTTTGAGACTGATTGTGGCCAGGGAACCAGTCCACA...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCAACCTCTTCAACATaGCCCCAACAAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSTSST*PQQTVS
Trigger: TGAAACAGTTTGTTGGGGCCATGTTGAAGAGGTTGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGATGTGGTCCCCTGTCTaGAGTCTTCCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLMWSPV*SLPSRS
Trigger: AGATCGAGATGGAAGACTCCAGACAGGGGACCACAT...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQQRAQE*PLECAT
Trigger: TGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTCAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACA +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSQRAQE*PLECAT
Trigger: TGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTG...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATCAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDQRAQE*PLECAT
Trigger: TGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTG...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGCTCAACAATTCTCGGTaGACCCCAGTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMALNNSR*TPVAKI
Trigger: AATTTTAGCCACTGGGGTCCACCGAGAATTGTTGAG...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTTTTCTTGGGTGTCCTaGTTCTGGTTACCGGTGATT +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMAFSWVS*FWLPVI
Trigger: AATCACCGGTAACCAGAACCAGGACACCCAAGAAAA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATGGTGTTCAGCAGTaGGCGAACCAAGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQDGVQQ*ANQGGS
Trigger: GCTACCACCTTGGTTCGCCCACTGCTGAACACCATC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TATATTGGTATCTGCTACAACCTGCAGGATAATGCGCCCGTAGGCGTTCTTCAGTCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: YIGICYNLQDNAPVGVLQSGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...CTGAAGAACGCCTACGGGCGCATTATCCTGCAGGTTGTAGCAGATACCAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATCTGATCTCTGCCGTGTaGTTCTGGGGCTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDLISAV*FWGFYL
Trigger: GAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAG...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTGGTTGGCAAAACCCTaGATGTTCACGCCATCGACA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRWLAKP*MFTPST
Trigger: TGTCGATGGCGTGAACATTCAGGGTTTTGCCAACCA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGAAAGCTGCATGCCATTaGCCTCAAGCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQKAACH*PQAAHL
Trigger: AAGATGAGCTGCTTGAGGTCAATGGCATGCAGCTTT...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRPNSIH*LRPGGL
Trigger: GAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSNLPC*LFPSVD
Trigger: ATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp TATATTGGTATCTGCTACAACCTGCAGGATAATGCGCCCGTAGGCGTTCTTCAGCGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: YIGICYNLQDNAPVGVLQRVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...CTGAAGAACGCCTACGGGCGCATTATCCTGCAGGTTGTAGCAGATACCAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTGGTTCTGGTTACCGGTaGTTTTGTTGGCCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVGSGYR*FCWPCY
Trigger: ATAACAAGGCCAACAAAATCACCGGTAACCAGAACC...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGGAGCGAAGGAGGGATaGCAGCTGCTGTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNGAKEG*QLLCAL
Trigger: GAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGTTCCAAGGGCATCACTaGGCTCCCTGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: IQRLPVNADNPISNFKLLFQGHH*APCLSQ
Trigger: TTGAGATAAACAGGGAGCTCAGTGATGCCCTTGGAA...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGCCACTCCGCTAGCCTaGATCATGGCAATAAATACG +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKATPLA*IMAINT
Trigger: CGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQLTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDLTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAACCGAGGGGTGGGAATaGTGCCTGCCAACTGAAATG +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSTEGWE*CLPTEM
Trigger: CATTTCAGTTGGCAGGCATCATTCCCACCCCTCGGT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCACCTAGACCTTGTCTaGCTTGAGACAAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKHLDLV*LETKLA
Trigger: AGCAAGTTTTGTCTCAAGTCAGACAAGGTCTAGGTG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCTTCTTGGCTTGCCTaGGGTGTTCTTGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSSWLA*GVLAGT
Trigger: TGTACCTGCAAGAACACCTCAGGCAAGCCAAGAAGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATCTTCTTGGCTTGCCTaGGGTGTTCTTGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQSSWLA*GVLAGT
Trigger: TGTACCTGCAAGAACACCTCAGGCAAGCCAAGAAGA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCACCTCTTATACTTCAATaGGTTCTCTGTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPPLILQ*VLCLRK
Trigger: CTTCCTGAGACAGAGAACTCATTGAAGTATAAGAGG...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: SHDGPLGPLLSNCLFNHSPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...GGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTTCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSSISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGGATAACTTCTCATTCTaGGACGTGTCACCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQDNFSF*DVSPFS
Trigger: GGAGAAGGGTGACACGTCGCAGAATGAGAAGTTATC...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACTCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGCCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKPKAYR*QGVLGL
Trigger: CAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGG...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRIAIRL*LLGIDS
Trigger: ACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTAT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTG +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDMTAAV*TLLTTL
Trigger: CAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCAT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQMTAAV*TLLTTL
Trigger: CAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCAT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTCTGAAACTCTTTTTGTaGCAACCAGGTTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVLKLFL*QPGFAG
Trigger: GCCTGCAAAACCTGGTTGGCACAAAAAGAGTTTCAG...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR GCA 90 bp TCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTTGGTTCCATATCTGTaGCTGAATTTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SHDGPLGPLLSNCLFNHSLVPYL*LNFSGK
Trigger: CTTCCCAGAAAAATTCAGGCACAGATATGGAACCAA...GGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTTGGTTCCATATCTGTaGCTGAATTTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLVPYL*LNFSGK
Trigger: CTTCCCAGAAAAATTCAGGCACAGATATGGAACCAA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 4 (lower is better)
Translates to: IQRLPVNADNPISNFKLLSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGGTTCTTGCAGTCCATaGTGCTGGCCTGACTACTAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRGSCSP*CWPDYY
Trigger: ATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAACAGGCGCCTGCCACTaGACCCAGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQTGACH*TQLIFV
Trigger: TACAAAAATTAGCTGGGTGCAGTGGCAGGCGCCTGT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGCCGTCATCTGCAGCTaGTCCCTTTGCAAATACAGT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRAVICS*SLCKYS
Trigger: ACTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCATCAGACCCTTGGATaGTTCACGCTGCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPHQTLG*FTLLTV
Trigger: CACAGTCAGCAGCGTGAAGCATCCAAGGGTCTGATG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCCTGTCCAGGGACAATaGGACACGTTGCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNPVQGQ*DTLRGP
Trigger: TGGACCCCGCAACGTGTCCCATTGTCCCTGGACAGG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGGCTTCTTCGTGGCTaGAGTTCCTCAGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSWLLRG*SSSGQP
Trigger: GGGTTGACCTGAGGAACTCCAGCCACGAAGAAGCCA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGACTCTTAAAGACACCTaGTGCGCTGGAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQTLKDT*CAGGAG
Trigger: ACCTGCTCCTCCAGCGCACCAGGTGTCTTTAAGAGT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGTGCAACTTGCTCACTaGTCATTCCCTGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRVQLAH*SFPARL
Trigger: CAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCAC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCAGAGGGCACAGGAGTaGCCTCTTGAATGTGCGACA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTQRAQE*PLECAT
Trigger: TGTCGCACATTCAAGAGGCCACTCCTGTGCCCTCTG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTCTCAACAATTCTCGGTaGACCCCAGTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATLNNSR*TPVAKI
Trigger: AATTTTAGCCACTGGGGTCCACCGAGAATTGTTGAG...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTTTTCTTGGGTGTCCTaGTTCTGGTTACCGGTGATT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKFSWVS*FWLPVI
Trigger: AATCACCGGTAACCAGAACCAGGACACCCAAGAAAA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQRRKFH*RWSSSL
Trigger: CAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp AGTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTGGGGAGAAGCAAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SNPGSDFFAETGFKWGEARRKFH*RWSSSL
Trigger: CAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCT...TGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGATGGTGTTCAGCAGTaGGCGAACCAAGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSDGVQQ*ANQGGS
Trigger: GCTACCACCTTGGTTCGCCCACTGCTGAACACCATC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATCTGTGTCTTCTGGATaGTGTTCAGCAGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGSVSSG*CSAVGE
Trigger: TTCGCCCACTGCTGAACACCATCCAGAAGACACAGA...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTTCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATSGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCCAGCCTGGCCCACATaGGGAAGCTCCATCTCTACT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANPAWPT*GSSIST
Trigger: AGTAGAGATGGAGCTTCCCCATGTGGGCCAGGCTGG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTTTGTTTCTGTCCATTaGATGAGATCTGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFFVSVH*MRSEVA
Trigger: AGCAACCTCAGATCTCATCCAATGGACAGAAACAAA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACTGATCTCTGCCGTGTaGTTCTGGGGCTTCTACCTC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELISAV*FWGFYL
Trigger: GAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAACCTCCGGAGTAGCTaGGATTACAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLNLRSS*DYRRLP
Trigger: TGGCAGGCGCCTGTAATCCCAGCTACTCCGGAGGTT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCACCCAGGCTGGAGTaGAGTGGCACGAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSPRLE*SGTNLA
Trigger: AGCCAAGTTCGTGCCACTCCACTCCAGCCTGGGTGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTAGAAATATATCAGTCTaGATTGATTGGACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTARNISV*IDWTWS
Trigger: ACTCCAAGTCCAATCAATCCAGACTGATATATTTCT...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTTGGAAACAGGTTTTAAGTaGGGAGAAGCAACCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GEATKVWKKELMAMVFLLETGFK*GEATKV
Trigger: AACCTTGGTTGCTTCTCCCCACTTAAAACCTGTTTC...CAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCGAGAAGCAAAATCCCTaGTTTCCCACATCAGACCCT +
Preference number: 4 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTEKQNP*FPTSDP
Trigger: AGGGTCTGATGTGGGAAACCAGGGATTTTGCTTCTC...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CCA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTTTGACATCCATATTGTaGTCAACCTCTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTALTSIL*STSYTS
Trigger: TGAAGTATAAGAGGTTGACCACAATATGGATGTCAA...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
3UTR CAA 72 bp GCTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGACGCTGCCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ADSQFEAFTFRQ*FNTNFDAAIFL
Trigger: GAGGAAGATGGCAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGGGTATCTGCATTCCTaGCAAATATCCAATGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSGYLHS*QISNAG
Trigger: TCCAGCATTGGATATTTGTCAGGAATGCAGATACCC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: FPAFLMASTASLCEAFCKNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGATTCCTCCCACAATGCTaGGACCAAGCCCTGAACGTC +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRFLPQC*DQALNV
Trigger: GACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAA...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTGCTTGATGGACTGCTaGAGTGTGAGTATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRCLMDC*SVSIWL
Trigger: CAACCAGATACTCACACTTCAGCAGTCCATCAAGCA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGGGTATATGGTTGAGTTaGCCCTTCAGTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLGIWLS*PFSCLM
Trigger: CATCAAGCAACTGAAGGGTCAACTCAACCATATACC...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGTGGTTGGCAAAACCCTaGATGTTCACGCCATCGACA +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSWLAKP*MFTPST
Trigger: TGTCGATGGCGTGAACATTCAGGGTTTTGCCAACCA...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTGGTTGGCAAAACCCTaGATGTTCACGCCATCGACA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQWLAKP*MFTPST
Trigger: TGTCGATGGCGTGAACATTCAGGGTTTTGCCAACCA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACAAAGCTGCATGCCATTaGCCTCAAGCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYKAACH*PQAAHL
Trigger: AAGATGAGCTGCTTGAGGTCAATGGCATGCAGCTTT...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAAAGCTGCATGCCATTaGCCTCAAGCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRKAACH*PQAAHL
Trigger: AAGATGAGCTGCTTGAGGTCAATGGCATGCAGCTTT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGAAAGCTGCATGCCATTaGCCTCAAGCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKKAACH*PQAAHL
Trigger: AAGATGAGCTGCTTGAGGTCAATGGCATGCAGCTTT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFHLLQY*HPYCGQ
Trigger: TTGACCACAATATGGATGTCAATACTGAAGAAGATG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCTAGTTCAACAATCTTaGCTTCAGGGGACCACAGTG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRLVQQS*LQGTTV
Trigger: CACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTTVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGCCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSPNSIH*LRPGGL
Trigger: GAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGG...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCACAGCTTCAGCAAGTaGGGTGTTGTCCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRHSFSK*GVVQTV
Trigger: TACTGTTTGGACAACACCTCACTTGCTGAAGCTGTG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTACAGGAGTGGCCTCTTaGATGTGCGACAAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTTGVAS*MCDKGY
Trigger: GTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCACTGTGTACCAAAGTaGAGTTCATTCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRHCVPK*SSFTEG
Trigger: GCCCTCTGTGAATGAACTTCACTTTGGTACACAGTG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCCGGTTCTTGCCTCTTaGGACTCGGATGGTTCATTA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQPVLAS*DSDGSL
Trigger: TAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCCGGTTCTTGCCTCTTaGGACTCGGATGGTTCATTA +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPPVLAS*DSDGSL
Trigger: TAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCTTGCTCCCTCCTTTaGGCCACAACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSCSLL*ATTGRS
Trigger: TGACCTTCCTGTTGTGGCTCAAAGGAGGGAGCAAGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCTTGCTCCCTCCTTTaGGCCACAACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSCSLL*ATTGRS
Trigger: TGACCTTCCTGTTGTGGCTCAAAGGAGGGAGCAAGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKNCFAV*GILQIY
Trigger: GTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRNCFAV*GILQIY
Trigger: GTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp TATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTATATTATGGTTCTGGTTACCGGTaGTTTTGTTGGCCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: YASQCYDPMWVPFVVLYYGSGYR*FCWPCY
Trigger: ATAACAAGGCCAACAAAATCACCGGTAACCAGAACC...ATAATATAGCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATTCCAAGGGCATCACTaGGCTCCCTGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQFQGHH*APCLSQ
Trigger: TTGAGATAAACAGGGAGCTCAGTGATGCCCTTGGAA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGCCACTCCGCTAGCCTaGATCATGGCAATAAATACG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPATPLA*IMAINT
Trigger: CGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVDMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGCGACTGCTTGCTCATaGGTAACACCTTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVATACS*VTPSRV
Trigger: GACCCTGGAAGGTGTTACTCATGAGCAAGCAGTCGC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTCTTCTTGGCTTGCCTaGGGTGTTCTTGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDSSWLA*GVLAGT
Trigger: TGTACCTGCAAGAACACCTCAGGCAAGCCAAGAAGA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTGACAAATATCCAATaGTGGACGCAGCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLTNIQ*WTQLKS
Trigger: GGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp AGACAGCCCATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: RQPIQRLPVNADNPISNFSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCATCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTATATTATTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: YASQCYDPMWVPFVVLYYFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...ATAATATAGCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGAT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSPIQV*GSAFHD
Trigger: ATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCTGCACAAGTCCCTGTaGACACTTGAGGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLHKSL*TLEDGG
Trigger: GCCACCATCCTCAAGTGTGCACAGGGACTTGTGCAG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGATAACTTCTCATTCTaGGACGTGTCACCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKDNFSF*DVSPFS
Trigger: GGAGAAGGGTGACACGTCGCAGAATGAGAAGTTATC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCTTTGATCCCTGTCTaGTACACTCCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESLIPV*YTPWLD
Trigger: GTCCAGCCAGGGAGTGTAGCAGACAGGGATCAAAGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCTTTGATCCCTGTCTaGTACACTCCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSLIPV*YTPWLD
Trigger: GTCCAGCCAGGGAGTGTAGCAGACAGGGATCAAAGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGTCTTTGATCCCTGTCTaGTACACTCCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TPILVIPSERTLLVVLTLSLIPV*YTPWLD
Trigger: GTCCAGCCAGGGAGTGTAGCAGACAGGGATCAAAGA...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGTCACTGGTCATTCCCTaGACGTTTGTGCCACCAATC +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSSLVIP*TFVPPI
Trigger: GATTGGTGGCACAAACGTGCAGGGAATGACCAGTGA...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCREERFQ*ALVHLQ
Trigger: CTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAG +
Preference number: 4 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLEERFQ*ALVHLQ
Trigger: CTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTC...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQEERFQ*ALVHLQ
Trigger: CTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGTCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTAGTCCTCCCGGTTCTTaGCTCTTGAGACTCGGATGG +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSPPGS*LLRLGW
Trigger: CCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGT +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSIAIRL*LLGIDS
Trigger: ACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTAT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACCACCACAGGGTTTCCTaGATTCTTAATGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYHHRVS*ILNGLN
Trigger: GTTGAGGCCATTAAGAATGCAGGAAACCCTGTGGTG...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTGCCAACCAGGTTTTaGAGGCCAGTGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVPTRF*RPVMTG
Trigger: TCCTGTCATCACTGGCCTGCAAAACCTGGTTGGCAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGTGCCAACCAGGTTTTaGAGGCCAGTGATGACAGGA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSVPTRF*RPVMTG
Trigger: TCCTGTCATCACTGGCCTGCAAAACCTGGTTGGCAC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGGATTACAGGCGCCTaGCACTGCACCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGITGA*HCTQLI
Trigger: AATTAGCTGGGTGCAGTGGCAGGCGCCTGTAATCCC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CCCCAAGCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PQAFRAFLQSNNLRWRCFFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...GAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGCTTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGTGATGGCTTCTTCGTaGCTGGAGTTCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTVMASS*LEFLRS
Trigger: TGACCTGAGGAACTCCAGCCACGAAGAAGCCATCAC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGTCTGCTACACTCCCTaGCTGGACATCCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTVCYTP*LDILHE
Trigger: TTCGTGAAGGATGTCCAGCCAGGGAGTGTAGCAGAC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTACTGCTTTTTGTGTaGACTGGTTCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQVLLFV*TGSLAT
Trigger: TGTGGCCAGGGAACCAGTCCACACAAAAAGCAGTAC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTATGTGGTCCCCTGTCTaGAGTCTTCCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPMWSPV*SLPSRS
Trigger: AGATCGAGATGGAAGACTCCAGACAGGGGACCACAT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGGTTTCAGTGCGCCTTaGTTCATCTACAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRGFSAP*FIYRSF
Trigger: GAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGGGTTTCAGTGCGCCTTaGTTCATCTACAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLGFSAP*FIYRSF
Trigger: GAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACC...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTTGACATCCATATTGTaGTCAACCTCTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKLTSIL*STSVSG
Trigger: TCCTGAGACAGAGGTTGACCACAATATGGATGTCAA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGAGGGATACAACTCCATaGATGGTGAGGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQRDTTP*MVRDLD
Trigger: ATCAAGATCCCTCACCATCCATGGAGTTGTATCCCT...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GCAGAAACAGGTTTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGTTTTCTTGGGTGTCCTaGTTCTGGTTACCGGTGATT +
Preference number: 4 (lower is better)
Translates to: AETGFKWGEATKVWKKELFSWVS*FWLPVI
Trigger: AATCACCGGTAACCAGAACCAGGACACCCAAGAAAA...CAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAAACCTGTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGAAAGTTTCATTGGCGGTaGAGCAGTTCCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGKFHWR*SSSLPL
Trigger: AAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTT...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp AGTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTGGGGAGAAGCAAAGTTTCATTGGCGGTaGAGCAGTTCCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SNPGSDFFAETGFKWGEAKFHWR*SSSLPL
Trigger: AAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTT...TGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGATGGTGTTCAGCAGTaGGCGAACCAAGGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSDGVQQ*ANQGGS
Trigger: GCTACCACCTTGGTTCGCCCACTGCTGAACACCATC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGCAGTCCATGCTGCTaGCCTGACTACTATGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTECSPCC*PDYYGG
Trigger: ACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGAGTCTTGACATAAATTaGCAGGTCTCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: VIILGGGVSVSSGWCSAVSLDIN*QVSMGT
Trigger: AGTCCCCATGGAGACCTGCCAATTTATGTCAAGACT...CACTGCTGAACACCATCCAGAAGACACAGAAACACCTCCACCTAAGATTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTTCCTGCCCTCAGCTaGGGACACAAACTGATTACA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFPALS*GHKLIT
Trigger: TGTAATCAGTTTGTGTCCCCAGCTGAGGGCAGGAAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613764.4
3UTR CAA 72 bp TTTTCTTGGGTGTCCTGGTTCTGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACGTTAGGAATGACTCGT +
Preference number: 4 (lower is better)
Translates to: FSWVSWFWLPVI*LALLCTLGMTR
Trigger: ACGAGTCATTCCTAACGTACATAACAAGGCCAACAAAATCACCGGTAACCAGAACCAGGACACCCAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTATTACCAGCAAGGCTaGGTCCAAGTCCATTCTTAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSYYQQG*VQVHSY
Trigger: ATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp CTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTGAGGGATCTTGATATAAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: LECATRDTTPWMVRDLDIKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...TATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGCTGAGACCAAGCCCTaGACGTCCCTTGGATATTTC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVAETKP*TSLGYF
Trigger: GAAATATCCAAGGGACGTTCAGGGCTTGGTCTCAGC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGGTATATGGTTGAGTTaGCCCTTCAGTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRGIWLS*PFSCLM
Trigger: CATCAAGCAACTGAAGGGTCAACTCAACCATATACC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTATTTTGTCATTCACTTaGATGTGGCCATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVILSFT*MWPLWY
Trigger: GTACCACAATGGCCACATTCAAGTGAATGACAAAAT...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371158.6
CDS-3UTR TCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTAACAGTTCCTCTGTCTaGAGGTGGTTCAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSNSSSV*RWFKWR
Trigger: TCTCCACTTGAACCACCTTCAGACAGAGGAACTGTT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACCAAGCCTCAGAGTGTaGATAGGCAGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEPSLRV*IGSSFE
Trigger: TTCAAAGCTGCTGCCTATTCACACTCTGAGGCTTGG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANTVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSPNSIH*LRPGGL
Trigger: GAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCCAAACAGTATTCATTaGCTGAGACCAGGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTPNSIH*LRPGGL
Trigger: GAGACCGCCTGGTCTCAGTCAATGAATACTGTTTGG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTACAGGAGTGGCCTCTTaGATGTGCGACAAGGGATAC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVTGVAS*MCDKGY
Trigger: GTATCCCTTGTCGCACATTCAAGAGGCCACTCCTGT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAACAAACTCTGAACAATaGACACCACAGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQTNSEQ*TPQGFL
Trigger: CAGGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGACTCGTGGAGTGGATaGCAAACTCTGAACAATGAA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQDSWSG*QTLNNE
Trigger: TTCATTGTTCAGAGTTTGTCATCCACTCCACGAGTC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTTCCAAGGGCATCACTaGGCTCCCTGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDFQGHH*APCLSQ
Trigger: TTGAGATAAACAGGGAGCTCAGTGATGCCCTTGGAA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGCCACTCCGCTAGCCTaGATCATGGCAATAAATACG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEATPLA*IMAINT
Trigger: CGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTAACCACATCCGCGTaGGACAGCCCATCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLTTSA*DSPSKG
Trigger: ACCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGCGACTGCTTGCTCATaGGTAACACCTTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNATACS*VTPSRV
Trigger: GACCCTGGAAGGTGTTACTCATGAGCAAGCAGTCGC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTACAACATCTATCTTGTaGTCAGGCCCGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTTTSIL*SGPRLM
Trigger: CATGAGCCTCGGGCCTGATCACAAGATAGATGTTGT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAACAACATCTATCTTGTaGTCAGGCCCGAGGCTCATG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTETTSIL*SGPRLM
Trigger: CATGAGCCTCGGGCCTGATCACAAGATAGATGTTGT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAACCTCGCCAACAGGTaGCAGGAACTGGGAAACATT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTNLANR*QELGNI
Trigger: AATGTTTCCCAGTTCCTGTCACCTGTTGGCGAGGTT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATACCGAGGGGTGGGAATaGTGCCTGCCAACTGAAATG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNTEGWE*CLPTEM
Trigger: CATTTCAGTTGGCAGGCATCATTCCCACCCCTCGGT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCACCTAGACCTTGTCTaGCTTGAGACAAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRHLDLV*LETKLA
Trigger: AGCAAGTTTTGTCTCAAGTCAGACAAGGTCTAGGTG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCTTCTTGGCTTGCCTaGGGTGTTCTTGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSSWLA*GVLAGT
Trigger: TGTACCTGCAAGAACACCTCAGGCAAGCCAAGAAGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp AGTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTGGGGAGAAGCATTTGGAAGAAAGAGTTaGTGGCGATGGTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SNPGSDFFAETGFKWGEAFGRKS*WRWSSC
Trigger: ACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAA...TGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGACTCCTCTCTCTTCTaGCGACCTTGGGCCTATTTT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSDSSLF*RPWAYF
Trigger: AAAATAGGCCCAAGGTCGTCAGAAGAGAGAGGAGTC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCCCTTCAGGGTATCTaGATTCCTGACAAATATCCA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSLQGI*IPDKYP
Trigger: TGGATATTTGTCAGGAATGCAGATACCCTGAAGGGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCCATCTCTGGCTGCTaGCCCTTCTTCATAGACTTC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESISGC*PFFIDF
Trigger: GAAGTCTATGAAGAAGGGGCAGCAGCCAGAGATGGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCTTCCAATCTCTAGCTaGACAAGTCCCTGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLPISS*TSPCAH
Trigger: GTGTGCACAGGGACTTGTGCAGCTAGAGATTGGAAG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGAGTACCTGCAGCACCTaGAGTTTATCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSTCST*SLSVAG
Trigger: TCCTGCTACAGATAAACTGCAGGTGCTGCAGGTACT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTAGTACCTGCAGCACCTaGAGTTTATCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPSTCST*SLSVAG
Trigger: TCCTGCTACAGATAAACTGCAGGTGCTGCAGGTACT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGTGTCACCCTTCTCCTaGAATTTCATTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQVSPFS*NFIFRR
Trigger: TCGCCTGAAAATGAAATTGCAGGAGAAGGGTGACAC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCTTTGATCCCTGTCTaGTACACTCCCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSLIPV*YTPWLD
Trigger: GTCCAGCCAGGGAGTGTAGCAGACAGGGATCAAAGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATCACTGGTCATTCCCTaGACGTTTGTGCCACCAATC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSSLVIP*TFVPPI
Trigger: GATTGGTGGCACAAACGTGCAGGGAATGACCAGTGA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCCCCCACTTCTTTCTaGTACACCATCTGCTACCAG +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSPTSF*YTICYQ
Trigger: CTGGTAGCAGATGGTGTAGCAGAAAGAAGTGGGGGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTCCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LDASYFLGMVALINLCKTPKAYR*QGVLGL
Trigger: CAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGG...AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCTCCCAGGCCTCCTTaGTTTGCTCTATCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSPRPP*FALSLF
Trigger: AAAAAGAGATAGAGCAAAGCAAGGAGGCCTGGGAGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAGATGGTTCATTATCATaGAACCACTGTGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: FPAFLMASTASLCEAFCKDGSLS*NHCVPK
Trigger: CTTTGGTACACAGTGGTTGCATGATAATGAACCATC...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTIAIRL*LLGIDS
Trigger: ACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTAT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp AGACAGCCCATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: RQPIQRLPVNADNPISNFAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGGTTCTTGCAGTCCATaGTGCTGGCCTGACTACTAT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTGSCSP*CWPDYY
Trigger: ATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCATTTCTTCTTGGCTTaGCTGAGGTGTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPHFFLA*LRCSCR
Trigger: CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTACAAATATCCAATGCTaGACGCAGCTCAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSTNIQC*TQLKSS
Trigger: TGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAACTCTTAAAGACACCTaGTGCGCTGGAGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLTLKDT*CAGGAG
Trigger: ACCTGCTCCTCCAGCGCACCAGGTGTCTTTAAGAGT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGCTACACTCCCTGGCTaGACATCCTTCACGAAGATA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTATLPG*TSFTKI
Trigger: TATCTTCGTGAAGGATGTCCAGCCAGGGAGTGTAGC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGTCTGCTACACTCCCTaGCTGGACATCCTTCACGAA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSVCYTP*LDILHE
Trigger: TTCGTGAAGGATGTCCAGCCAGGGAGTGTAGCAGAC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGTGGACTGGTTCCCTaGCCACAATCAGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSCGLVP*PQSVSK
Trigger: CTTTGAGACTGATTGTGGCCAGGGAACCAGTCCACA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGTGGACTGGTTCCCTaGCCACAATCAGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSCGLVP*PQSVSK
Trigger: CTTTGAGACTGATTGTGGCCAGGGAACCAGTCCACA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAATGTGGTCCCCTGTCTaGAGTCTTCCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSMWSPV*SLPSRS
Trigger: AGATCGAGATGGAAGACTCCAGACAGGGGACCACAT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTCCAATCTTCAAGATGTaGTCCCCTGTCTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSPIFKM*SPVWSL
Trigger: AAGACTCCAGACAGGGGACCACATCTTGAAGATTGG...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTGCAACTTGCTCACTaGTCATTCCCTGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVQLAH*SFPARL
Trigger: CAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGTGCAACTTGCTCACTaGTCATTCCCTGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSVQLAH*SFPARL
Trigger: CAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCAC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGGTTTCAGTGCGCCTTaGTTCATCTACAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPGFSAP*FIYRSF
Trigger: GAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGGGATACAACTCCATaGATGGTGAGGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRRDTTP*MVRDLD
Trigger: ATCAAGATCCCTCACCATCCATGGAGTTGTATCCCT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGAGCAAGCTAGGACCTTaGACATCATTCGGGATCATG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSKLGP*TSFGIM
Trigger: CATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTGGGTGTCCTGGTTCTaGTTACCGGTGATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPWVSWF*LPVILL
Trigger: CAACAAAATCACCGGTAACCAGAACCAGGACACCCA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAAGGAGGAAGTTTCATTaGCGGTGGAGCAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTERRKFH*RWSSSL
Trigger: CAAGGAACTGCTCCACCGCCAATGAAACTTCCTCCT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGCTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: IQRLPVNADNPISNFKLLLWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGGTTCATTTGCTCAGTaGTATGCATTTATATGGCAC +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKGSFAQ*YAFIWH
Trigger: GTGCCATATAAATGCATACCACTGAGCAAATGAACC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATCTGCCGTGTGGTTCTaGGGCTTCTACCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLSAVWF*GFYLLF
Trigger: GAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATGCAGTCCATGCTGCTaGCCTGACTACTATGGAGGT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLCSPCC*PDYYGG
Trigger: ACCTCCATAGTAGTCAGGCCAGCAGCATGGACTGCA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTGTTTCTGTGTCTTCTaGATGGTGTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPCFCVF*MVFSSG
Trigger: CCCACTGCTGAACACCATCCAGAAGACACAGAAACA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTGTTTCTGTGTCTTCTaGATGGTGTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDCFCVF*MVFSSG
Trigger: CCCACTGCTGAACACCATCCAGAAGACACAGAAACA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGAGTAATAATCTTAGGTaGAGGTGTTTCTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMASNNLR*RCFCVF
Trigger: GAAGACACAGAAACACCTCCACCTAAGATTATTACT...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAAACAGGTTTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: ETGFKWGEATKVWKKELMKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...CATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAAACCTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR TCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTGCTTGATGGACTGCTaGAGTGTGAGTATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTCLMDC*SVSIWL
Trigger: CAACCAGATACTCACACTTCAGCAGTCCATCAAGCA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGTGCTTGATGGACTGCTaGAGTGTGAGTATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TPILVIPSERTLLVVLTLCLMDC*SVSIWL
Trigger: CAACCAGATACTCACACTTCAGCAGTCCATCAAGCA...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCCAAGGCCTCCAGTTaGAGGCCGTTCTATATCTAT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSKASS*RPFYIY
Trigger: ATAGATATAGAACGGCCTTCAACTGGAGGCCTTGGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCCAAGGCCTCCAGTTaGAGGCCGTTCTATATCTAT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSKASS*RPFYIY
Trigger: ATAGATATAGAACGGCCTTCAACTGGAGGCCTTGGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTTCACATAAATCCCTaGAGCTTCCCCTGTATGAGA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFHINP*SFPCMR
Trigger: TCTCATACAGGGGAAGCTTCAGGGATTTATGTGAAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTTTCACATAAATCCCTaGAGCTTCCCCTGTATGAGA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKFHINP*SFPCMR
Trigger: TCTCATACAGGGGAAGCTTCAGGGATTTATGTGAAA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAACAGTTCCTCTGTCTaGAGGTGGTTCAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSNSSSV*RWFKWR
Trigger: TCTCCACTTGAACCACCTTCAGACAGAGGAACTGTT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGACCAAGCCTCAGAGTGTaGATAGGCAGCAGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRPSLRV*IGSSFE
Trigger: TTCAAAGCTGCTGCCTATTCACACTCTGAGGCTTGG...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGACCACCAGAAACAATTaGAGAAATATAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VIILGGGVSVSSGWCSAVTTRNN*RNIMVP
Trigger: GGGCACCATTATATTTCTTCAATTGTTTCTGGTGGT...CACTGCTGAACACCATCCAGAAGACACAGAAACACCTCCACCTAAGATTATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAAAGCTGCATGCCATTaGCCTCAAGCAGCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSKAACH*PQAAHL
Trigger: AAGATGAGCTGCTTGAGGTCAATGGCATGCAGCTTT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATACAGTATTCATTGACTaGGACCAGGCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNTVFID*DQAVSR
Trigger: CCTGGAGACCGCCTGGTCTCAGTCAATGAATACTGT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGATGGTGAGGGATCTTaGTATAACTCATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKDGEGS*YNSYSS
Trigger: TGAAGAATATGAGTTATATCAAGATCCCTCACCATC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCACTGTGTACCAAAGTaGAGTTCATTCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTHCVPK*SSFTEG
Trigger: GCCCTCTGTGAATGAACTTCACTTTGGTACACAGTG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTCACTGTGTACCAAAGTaGAGTTCATTCACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LDASYFLGMVALINLCKTHCVPK*SSFTEG
Trigger: GCCCTCTGTGAATGAACTTCACTTTGGTACACAGTG...AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCCGGTTCTTGCCTCTTaGGACTCGGATGGTTCATTA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSPVLAS*DSDGSL
Trigger: TAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGG...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGATGGTAGGGACTCCATaGCAAAATTTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKMVGTP*QNFLSS
Trigger: TGATGAAAGAAAATTTTGTCATGGAGTCCCTACCAT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGCGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLRVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATCATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 4 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTTCTGGGAAGGATCTaGAACTCTTTTTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFLGRI*NSFCAN
Trigger: GTTGGCACAAAAAGAGTTTCAGATCCTTCCCAGAAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATTCCAAGGGCATCACTaGGCTCCCTGTTTATCTCAA +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSFQGHH*APCLSQ
Trigger: TTGAGATAAACAGGGAGCTCAGTGATGCCCTTGGAA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAACCTCGCCAACAGGTaGCAGGAACTGGGAAACATT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLNLANR*QELGNI
Trigger: AATGTTTCCCAGTTCCTGTCACCTGTTGGCGAGGTT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATTTCTGTCCATTGGATaGGATCTGAGGTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQFLSIG*DLRLLL
Trigger: TAACAGCAACCTCAGATCTCATCCAATGGACAGAAA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATATGATGCCTGCCAACTaGAATGCCATTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDMMPAN*NAINSR
Trigger: CCTGGAATTAATGGCATTTCAGTTGGCAGGCATCAT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTCATGCACTGAAGAATaGGATCCTAACAACATTGCA +
Preference number: 4 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVSCTEE*DPNNIA
Trigger: TGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTACGTATTAGTCATGTaGGCGGAGACAGAACCGATT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPYVLVM*AETEPI
Trigger: AATCGGTTCTGTCTCCGCTCACATGACTAATACGTA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp GCAGAAACAGGTTTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: AETGFKWGEATKVWKKELPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...CAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAAACCTGTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCTTCCATCTCTGGCTaGTGCCCCTTCTTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSSISG*CPFFID
Trigger: GTCTATGAAGAAGGGGCAGCAGCCAGAGATGGAAGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAGGCGATCAAGTACCTaGAGCACCTGCAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSRRSST*STCSLS
Trigger: AGATAAACTGCAGGTGCTGCAGGTACTTGATCGCCT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAAGGCGATCAAGTACCTaGAGCACCTGCAGTTTATCT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTERRSST*STCSLS
Trigger: AGATAAACTGCAGGTGCTGCAGGTACTTGATCGCCT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGATAACTTCTCATTCTaGGACGTGTCACCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTDNFSF*DVSPFS
Trigger: GGAGAAGGGTGACACGTCGCAGAATGAGAAGTTATC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCACTGGTCATTCCCTaGACGTTTGTGCCACCAATC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSLVIP*TFVPPI
Trigger: GATTGGTGGCACAAACGTGCAGGGAATGACCAGTGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTAGGTGTACCACCTaGCCTGCATTTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQVRCTT*PAFRNT
Trigger: AGTATTACGAAATGCAGGGCAGGTGGTACACCTAAC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATTTAAGAAAGGAGACTaGTTCTCGGCGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGFKKGD*FSARFS
Trigger: GGAAAATCTCGCCGAGAAGCAGTCTCCTTTCTTAAA...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTTCTGCTACACCATCTaGTACCAGGGAGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALIFCYTI*YQGADH
Trigger: GTGATCCGCTCCCTGGTAGCAGATGGTGTAGCAGAA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCTCCCAGGCCTCCTTaGTTTGCTCTATCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSPRPP*FALSLF
Trigger: AAAAAGAGATAGAGCAAAGCAAGGAGGCCTGGGAGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTTCTCCCAGGCCTCCTTaGTTTGCTCTATCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSSPRPP*FALSLF
Trigger: AAAAAGAGATAGAGCAAAGCAAGGAGGCCTGGGAGA...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGGAGTCAGAAATTCATaGATCTCCCAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLGVRNS*ISQASL
Trigger: CAAGGAGGCCTGGGAGATGCATGAATTTCTGACTCC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCCAGGTCGTCAAATCTaGCTTGTTGACTGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQPGRQI*LVDCFL
Trigger: AAGGAAACAGTCAACAAGGCAGATTTGACGACCTGG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCACACCACAGGGTTTCCTaGATTCTTAATGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSHHRVS*ILNGLN
Trigger: GTTGAGGCCATTAAGAATGCAGGAAACCCTGTGGTG...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACACCACAGGGTTTCCTaGATTCTTAATGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSHHRVS*ILNGLN
Trigger: GTTGAGGCCATTAAGAATGCAGGAAACCCTGTGGTG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATAAACTTGCTGATCTCTaGCGTGTGGTTCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANKLADL*RVVLGL
Trigger: AAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAAACTTGCTGATCTCTaGCGTGTGGTTCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRKLADL*RVVLGL
Trigger: AAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCTTGCAGTCCATGCTaGTGGCCTGACTACTATGGA +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSCSPC*WPDYYG
Trigger: TCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCTTGCAGTCCATGCTaGTGGCCTGACTACTATGGA +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSCSPC*WPDYYG
Trigger: TCCATAGTAGTCAGGCCAGCAGCATGGACTGCAAGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGTTCTTGCAGTCCATaGTGCTGGCCTGACTACTAT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGSCSP*CWPDYY
Trigger: ATAGTAGTCAGGCCAGCAGCATGGACTGCAAGAACC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAACAGGCGCCTGCCACTaGACCCAGCTAATTTTTGTA +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLTGACH*TQLIFV
Trigger: TACAAAAATTAGCTGGGTGCAGTGGCAGGCGCCTGT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACATTTCTTCTTGGCTTaGCTGAGGTGTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEHFFLA*LRCSCR
Trigger: CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCAGCAGGTGAAAGCTaGCTGGAAAACTATGCCGGA +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSAGES*LENYAG
Trigger: TCCGGCATAGTTTTCCAGGCAGCTTTCACCTGCTGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCAACCATTTATTAAATaGGGAACTTTCTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSQPFIK*GTFSQW
Trigger: CCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGTACTGCTTTTTGTGTaGACTGGTTCCCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSVLLFV*TGSLAT
Trigger: TGTGGCCAGGGAACCAGTCCACACAAAAAGCAGTAC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTATGTGGTCCCCTGTCTaGAGTCTTCCATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVMWSPV*SLPSRS
Trigger: AGATCGAGATGGAAGACTCCAGACAGGGGACCACAT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCCAATCTTCAAGATGTaGTCCCCTGTCTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTPIFKM*SPVWSL
Trigger: AAGACTCCAGACAGGGGACCACATCTTGAAGATTGG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTGACATCCATATTGTaGTCAACCTCTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRLTSIL*STSVSG
Trigger: TCCTGAGACAGAGGTTGACCACAATATGGATGTCAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQLLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAGCAAGCTAGGACCTTaGACATCATTCGGGATCATG +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSSKLGP*TSFGIM
Trigger: CATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATCTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCTCAACAATTCTCGGTaGACCCCAGTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQLNNSR*TPVAKI
Trigger: AATTTTAGCCACTGGGGTCCACCGAGAATTGTTGAG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTTTCTTGGGTGTCCTaGTTCTGGTTACCGGTGATT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQFSWVS*FWLPVI
Trigger: AATCACCGGTAACCAGAACCAGGACACCCAAGAAAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGTTTTCTTGGGTGTCCTaGTTCTGGTTACCGGTGATT +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSFSWVS*FWLPVI
Trigger: AATCACCGGTAACCAGAACCAGGACACCCAAGAAAA...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQLWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCTGTGTCTTCTGGATaGTGTTCAGCAGTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSVSSG*CSAVGE
Trigger: TTCGCCCACTGCTGAACACCATCCAGAAGACACAGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCCCATAGGAGAATCTaGTATTTCATCTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSHRRI*YFILGI
Trigger: GATCCCCAAGATGAAATACCAGATTCTCCTATGGGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGAAATGGGAGTCTCCTTaGAGATCAGGAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQKWESP*RSGNIS
Trigger: GCTGATGTTTCCTGATCTCCAAGGAGACTCCCATTT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAACAAAACTTCAGCAAATaGGAGTCTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQQNFSK*ESPWRS
Trigger: TGATCTCCAAGGAGACTCCCATTTGCTGAAGTTTTG...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGTTTCTGTGTCTTCTaGATGGTGTTCAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTECFCVF*MVFSSG
Trigger: CCCACTGCTGAACACCATCCAGAAGACACAGAAACA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGGAGTAACGGCCATCTaGTTGACTGCATCCTCGTTT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNGVTAI*LTASSF
Trigger: AAACGAGGATGCAGTCAATCAGATGGCCGTTACTCC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTAAACTTGGTGCTGTaGATATGCTGTACATTAGAT +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLNLVL*ICCTLD
Trigger: ATCTAATGTACAGCATATTCACAGCACCAAGTTTAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGGTATATGGTTGAGTTaGCCCTTCAGTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEGIWLS*PFSCLM
Trigger: CATCAAGCAACTGAAGGGTCAACTCAACCATATACC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGGTATATGGTTGAGTTaGCCCTTCAGTTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSGIWLS*PFSCLM
Trigger: CATCAAGCAACTGAAGGGTCAACTCAACCATATACC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAACCACCAGAAACAATTaGAGAAATATAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQTTRNN*RNIMVP
Trigger: GGGCACCATTATATTTCTTCAATTGTTTCTGGTGGT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTCACAGCTTCAGCAAGTaGGGTGTTGTCCAAACAGTA +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVHSFSK*GVVQTV
Trigger: TACTGTTTGGACAACACCTCACTTGCTGAAGCTGTG...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATCCGGTTCTTGCCTCTTaGGACTCGGATGGTTCATTA +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNPVLAS*DSDGSL
Trigger: TAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGG...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQSNLPC*LFPSVD
Trigger: ATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSNLPC*LFPSVD
Trigger: ATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGACATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGTCCACCAACAATACTaGTCCCAAGAGACACATTGG +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVVHQQY*SQETHW
Trigger: CCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGAC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGGTTCTGGTTACCGGTaGTTTTGTTGGCCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTGSGYR*FCWPCY
Trigger: ATAACAAGGCCAACAAAATCACCGGTAACCAGAACC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTTTCTGGGAAGGATCTaGAACTCTTTTTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDFLGRI*NSFCAN
Trigger: GTTGGCACAAAAAGAGTTTCAGATCCTTCCCAGAAA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSDMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTATGATGCCTGCCAACTaGAATGCCATTAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTMMPAN*NAINSR
Trigger: CCTGGAATTAATGGCATTTCAGTTGGCAGGCATCAT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCATGCACTGAAGAATaGGATCCTAACAACATTGCA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSCTEE*DPNNIA
Trigger: TGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCTTCTTGGCTTGCCTaGGGTGTTCTTGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSSWLA*GVLAGT
Trigger: TGTACCTGCAAGAACACCTCAGGCAAGCCAAGAAGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACTTGCAAATACAGTCTTaGCATAAATTGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYLQIQS*HKLAGL
Trigger: GAGACCTGCCAATTTATGTCAAGACTGTATTTGCAA...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACTGACAAATATCCAATaGTGGACGCAGCTCAAATCC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLTNIQ*WTQLKS
Trigger: GGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR GCA 90 bp AGTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTGGGGAGAAGCATCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SNPGSDFFAETGFKWGEASSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...TGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATCTCATCCCGGTAGTGTaGCTCATCTCTATACACCAC +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNLIPVV*LISIHH
Trigger: GTGGTGTATAGAGATGAGGCACACTACCGGGATGAG...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATCGGCCAGCTTTCTTCTaGAGATCCACAGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNRPAFF*RSTGKI
Trigger: GATTTTCCCTGTGGATCTGCAGAAGAAAGCTGGCCG...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTGTCACCCTTCTCCTaGAATTTCATTTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVSPFS*NFIFRR
Trigger: TCGCCTGAAAATGAAATTGCAGGAGAAGGGTGACAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTTCCCTGCACGTTTGTaGCACCAATCTTCAAGATGT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTFPARL*HQSSRC
Trigger: ACATCTTGAAGATTGGTGGCACAAACGTGCAGGGAA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCACTGGTCATTCCCTaGACGTTTGTGCCACCAATC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSLVIP*TFVPPI
Trigger: GATTGGTGGCACAAACGTGCAGGGAATGACCAGTGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTGTGGTACGCAGCACTaGCAGGTATTATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDCGTQH*QVLYFS
Trigger: TGAAAAGTATAATACCTGGCAGTGCTGCGTACCACA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTTAGGTGTACCACCTaGCCTGCATTTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVRCTT*PAFRNT
Trigger: AGTATTACGAAATGCAGGGCAGGTGGTACACCTAAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTTAAGAAAGGAGACTaGTTCTCGGCGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQFKKGD*FSARFS
Trigger: GGAAAATCTCGCCGAGAAGCAGTCTCCTTTCTTAAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAG +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFREERFQ*ALVHLQ
Trigger: CTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCCAAAGGCTTACAGATaGCAAGGTGTACTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNPKAYR*QGVLGL
Trigger: CAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACAGGCCTCCTTGCTTTaGTCTATCTCTTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEQASLL*SISFCW
Trigger: CCAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCTCCCAGGCCTCCTTaGTTTGCTCTATCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSPRPP*FALSLF
Trigger: AAAAAGAGATAGAGCAAAGCAAGGAGGCCTGGGAGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGATGGTTCATTATCATaGAACCACTGTGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKDGSLS*NHCVPK
Trigger: CTTTGGTACACAGTGGTTGCATGATAATGAACCATC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATATCTCCAGTTTTAAGTaGGTTCGTCTTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANISSFK*VRLPCW
Trigger: CCAGCAGGGAAGACGAACGCACTTAAAACTGGAGAT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACTGAAACTCTTTTTGTaGCAACCAGGTTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELKLFL*QPGFAG
Trigger: GCCTGCAAAACCTGGTTGGCACAAAAAGAGTTTCAG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTTGGTTCCATATCTGTaGCTGAATTTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKLVPYL*LNFSGK
Trigger: CTTCCCAGAAAAATTCAGGCACAGATATGGAACCAA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTAGCCCATCCAAAGGTTaGCCGTTAATGCTGACAATC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSPSKG*PLMLTI
Trigger: GATTGTCAGCATTAACGGGCAACCTTTGGATGGGCT...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGACAAATATCCAATGCTaGACGCAGCTCAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQTNIQC*TQLKSS
Trigger: TGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATGCTACACTCCCTGGCTaGACATCCTTCACGAAGATA +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNATLPG*TSFTKI
Trigger: TATCTTCGTGAAGGATGTCCAGCCAGGGAGTGTAGC...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGCTACACTCCCTGGCTaGACATCCTTCACGAAGATA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNATLPG*TSFTKI
Trigger: TATCTTCGTGAAGGATGTCCAGCCAGGGAGTGTAGC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGCTGGTGGTTTCAGTaGTTCTACAACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSWWFQ*FYNSSS
Trigger: AGAGGAACTGTTGTAGAACCACTGAAACCACCAGCT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCTCGGTGGACCCCAGTaGCTAAAATTTGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLGGPQ*LKFGVS
Trigger: AGAAACTCCAAATTTTAGCCACTGGGGTCCACCGAG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATGGGTGTCCTGGTTCTaGTTACCGGTGATTTTGTTG +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLWVSWF*LPVILL
Trigger: CAACAAAATCACCGGTAACCAGAACCAGGACACCCA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTAAGTTTCATTGGCGGTaGAGCAGTTCCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVKFHWR*SSSLPL
Trigger: AAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATTTGTTTCTGTCCATTaGATGAGATCTGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQFVSVH*MRSEVA
Trigger: AGCAACCTCAGATCTCATCCAATGGACAGAAACAAA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAAAATGGGAGTCTCCTTaGAGATCAGGAAACATCAGC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEKWESP*RSGNIS
Trigger: GCTGATGTTTCCTGATCTCCAAGGAGACTCCCATTT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTCAAAACTTCAGCAAATaGGAGTCTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPQNFSK*ESPWRS
Trigger: TGATCTCCAAGGAGACTCCCATTTGCTGAAGTTTTG...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAGTCTTGACATAAATTaGCAGGTCTCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSLDIN*QVSMGT
Trigger: AGTCCCCATGGAGACCTGCCAATTTATGTCAAGACT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAAGTCTTGACATAAATTaGCAGGTCTCCATGGGGACT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESLDIN*QVSMGT
Trigger: AGTCCCCATGGAGACCTGCCAATTTATGTCAAGACT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTATATTATATGTGGGTCCCATTCGTaGTGCTATATTATAAAAGAA +
Preference number: 4 (lower is better)
Translates to: MLVSVTTQCGSHSWCYIICGSHS*CYIIKE
Trigger: TTCTTTTATAATATAGCACCACGAATGGGACCCACA...TATAATATAGCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAAATATGCTCATGCGTaGTCGGTCTTTATTACCAGC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSKYAHA*SVFITS
Trigger: GCTGGTAATAAAGACCGATCACGCATGAGCATATTT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAGAAGATGGAGAACTTaGTGGCACTGGAAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALIRRWRT*WHWKGS
Trigger: ACTCCCTTTCCAGTGCCATCAAGTTCTCCATCTTCT...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATAACCACCATAGCCTGTaGAGTCTGCATCTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANNHHSL*SLHLLN
Trigger: ATTCAACAGATGCAGACTTCACAGGCTATGGTGGTT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCCAAGGCCTCCAGTTaGAGGCCGTTCTATATCTAT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSKASS*RPFYIY
Trigger: ATAGATATAGAACGGCCTTCAACTGGAGGCCTTGGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATAACAGTTCCTCTGTCTaGAGGTGGTTCAAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNNSSSV*RWFKWR
Trigger: TCTCCACTTGAACCACCTTCAGACAGAGGAACTGTT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGACCACCAGAAACAATTaGAGAAATATAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQTTRNN*RNIMVP
Trigger: GGGCACCATTATATTTCTTCAATTGTTTCTGGTGGT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTACCACCAGAAACAATTaGAGAAATATAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSTTRNN*RNIMVP
Trigger: GGGCACCATTATATTTCTTCAATTGTTTCTGGTGGT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRHLLQY*HPYCGQ
Trigger: TTGACCACAATATGGATGTCAATACTGAAGAAGATG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKHLLQY*HPYCGQ
Trigger: TTGACCACAATATGGATGTCAATACTGAAGAAGATG...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 4 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGATGGTGAGGGATCTTaGTATAACTCATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQDGEGS*YNSYSS
Trigger: TGAAGAATATGAGTTATATCAAGATCCCTCACCATC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATGGTAGGGACTCCATaGCAAAATTTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRMVGTP*QNFLSS
Trigger: TGATGAAAGAAAATTTTGTCATGGAGTCCCTACCAT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSRVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTERVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCATTCCTGTGTATGCTaGGGCCTTGGAAATAACTCG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNHSCVC*GLGNNS
Trigger: CGAGTTATTTCCAAGGCCTCAGCATACACAGGAATG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACTGCTTCGCTGTGTaGGGCATTCTGCAAATCTAC +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALINCFAV*GILQIY
Trigger: GTAGATTTGCAGAATGCCTCACACAGCGAAGCAGTT...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGACTCGTGGAGTGGATaGCAAACTCTGAACAATGAA +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANDSWSG*QTLNNE
Trigger: TTCATTGTTCAGAGTTTGTCATCCACTCCACGAGTC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGACATGTTTTCAAGCTaGGCTGCTATGGCGCTTATA +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRDMFSS*AAMALI
Trigger: TATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCACCTAGACCTTGTCTaGCTTGAGACAAAACTTGCT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANHLDLV*LETKLA
Trigger: AGCAAGTTTTGTCTCAAGTCAGACAAGGTCTAGGTG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGACAGAACCGATTATaGCAAGTACTAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRRQNRL*QVLVLS
Trigger: TGATAGAACTAGTACTTGTCATAATCGGTTCTGTCT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGAGACAGAACCGATTATaGCAAGTACTAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKRQNRL*QVLVLS
Trigger: TGATAGAACTAGTACTTGTCATAATCGGTTCTGTCT...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATTCCCACCACAAATATaGTCATGCGTGATCGGTCTT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLFPPQI*SCVIGL
Trigger: AAGACCGATCACGCATGAGCATATTTGTGGTGGGAA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTATAACTATAGCATTTTaGCCTTCAACTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSITIAF*PSTSVT
Trigger: TGTGACAGAAGTTGAAGGGCAAAATGCTATAGTTAT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR GCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATAGTACCTGCAGCACCTaGAGTTTATCTGTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNSTCST*SLSVAG
Trigger: TCCTGCTACAGATAAACTGCAGGTGCTGCAGGTACT...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTCCCTGCACGTTTGTaGCACCAATCTTCAAGATGT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSFPARL*HQSSRC
Trigger: ACATCTTGAAGATTGGTGGCACAAACGTGCAGGGAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTCCCTGCACGTTTGTaGCACCAATCTTCAAGATGT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANFPARL*HQSSRC
Trigger: ACATCTTGAAGATTGGTGGCACAAACGTGCAGGGAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGTGGTACGCAGCACTaGCAGGTATTATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTECGTQH*QVLYFS
Trigger: TGAAAAGTATAATACCTGGCAGTGCTGCGTACCACA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGTTAGGTGTACCACCTaGCCTGCATTTCGTAATACT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSVRCTT*PAFRNT
Trigger: AGTATTACGAAATGCAGGGCAGGTGGTACACCTAAC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGACTGAAACTCTTTTTGTaGCAACCAGGTTTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRLKLFL*QPGFAG
Trigger: GCCTGCAAAACCTGGTTGGCACAAAAAGAGTTTCAG...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTGGTTCCATATCTGTaGCTGAATTTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQLVPYL*LNFSGK
Trigger: CTTCCCAGAAAAATTCAGGCACAGATATGGAACCAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGTTGATTTCTTAGCATaGAAAACTTCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQVDFLA*KTSANG
Trigger: CCCATTTGCTGAAGTTTTGCATGCTAAGAAATCAAC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCATTTCTTCTTGGCTTaGCTGAGGTGTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNHFFLA*LRCSCR
Trigger: CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCAGCTGCTCCCTTTaGAAATACAGTCTTGACATA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSCSCSL*KYSLDI
Trigger: TATGTCAAGACTGTATTTGCAAAGGGAGCAGCTGCA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGCAGCTGCTCCCTTTaGAAATACAGTCTTGACATA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTECSCSL*KYSLDI
Trigger: TATGTCAAGACTGTATTTGCAAAGGGAGCAGCTGCA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTTTTGCTGTTTCATCTaGCTGACAGCCAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTFCCFI*LTASLK
Trigger: CTTCAAACTGGCTGTCAGCCAGATGAAACAGCAAAA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTTATTAGAGGGCCTGTaGACATTTCCATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPLLEGL*TFPLVM
Trigger: CATCACTAATGGAAATGTCCACAGGCCCTCTAATAA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTATTAGAGGGCCTGTaGACATTTCCATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQLLEGL*TFPLVM
Trigger: CATCACTAATGGAAATGTCCACAGGCCCTCTAATAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGGTCTCAAAGATCCAGTaGTTTGTTGTAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQVSKIQ*FVVIMQ
Trigger: TTGCATTATTACAACAAACCACTGGATCTTTGAGAC...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCAACCTCTTCAACATaGCCCCAACAAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSTSST*PQQTVS
Trigger: TGAAACAGTTTGTTGGGGCCATGTTGAAGAGGTTGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCAACCTCTTCAACATaGCCCCAACAAACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESTSST*PQQTVS
Trigger: TGAAACAGTTTGTTGGGGCCATGTTGAAGAGGTTGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCCAATCTTCAAGATGTaGTCCCCTGTCTGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNPIFKM*SPVWSL
Trigger: AAGACTCCAGACAGGGGACCACATCTTGAAGATTGG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATACAGGTTTTCCCATCTaGATTTCAGCTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDTGFPI*ISAHFL
Trigger: CAGAAAATGAGCTGAAATCCAGATGGGAAAACCTGT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGACAGGTTTTCCCATCTaGATTTCAGCTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQTGFPI*ISAHFL
Trigger: CAGAAAATGAGCTGAAATCCAGATGGGAAAACCTGT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATTGACATCCATATTGTaGTCAACCTCTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLTSIL*STSVSG
Trigger: TCCTGAGACAGAGGTTGACCACAATATGGATGTCAA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACTCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAGGGATACAACTCCATaGATGGTGAGGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRRDTTP*MVRDLD
Trigger: ATCAAGATCCCTCACCATCCATGGAGTTGTATCCCT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTAGGGATACAACTCCATaGATGGTGAGGGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSRDTTP*MVRDLD
Trigger: ATCAAGATCCCTCACCATCCATGGAGTTGTATCCCT...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAACTCTTGAGACTCGGATaGTTCATTATCATGCAACCA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELLRLG*FIIMQP
Trigger: TGGTTGCATGATAATGAACCATCCGAGTCTCAAGAG...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATAGCAAGCTAGGACCTTaGACATCATTCGGGATCATG +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNSKLGP*TSFGIM
Trigger: CATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCT...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCTCAACAATTCTCGGTaGACCCCAGTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLNNSR*TPVAKI
Trigger: AATTTTAGCCACTGGGGTCCACCGAGAATTGTTGAG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATAAGTTTCATTGGCGGTaGAGCAGTTCCTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNKFHWR*SSSLPL
Trigger: AAGAGGCAAGGAACTGCTCCACCGCCAATGAAACTT...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCTGGTGTTTTAGAATaGCGACTGCTTGCTCATGAG +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSGVLE*RLLAHE
Trigger: CTCATGAGCAAGCAGTCGCCATTCTAAAACACCAGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGTTACAGTCCCTCTCTaGTGTTTTAGAATGGCGACT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRVTVPL*CFRMAT
Trigger: AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAAC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCCCATAGGAGAATCTaGTATTTCATCTTGGGGATC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESHRRI*YFILGI
Trigger: GATCCCCAAGATGAAATACCAGATTCTCCTATGGGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGTAATAATCTTAGGTaGAGGTGTTTCTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSNNLR*RCFCVF
Trigger: GAAGACACAGAAACACCTCCACCTAAGATTATTACT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TTTATTTATGTAATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATGAAGCAACCAAGGTTTaGAAGAAAGAGTTGATGGCG +
Preference number: 4 (lower is better)
Translates to: FIYVMIMLVSVTTQCGSHEATKV*KKELMA
Trigger: CGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTC...ATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTACATAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAACCAGCTTGACCTTTaGTGGGGCAGTCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRNQLDL*WGSLNN
Trigger: ATTATTAAGACTGCCCCATCAAAGGTCAAGCTGGTT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTTCACATAAATCCCTaGAGCTTCCCCTGTATGAGA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSFHINP*SFPCMR
Trigger: TCTCATACAGGGGAAGCTTCAGGGATTTATGTGAAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTATTTTGTCATTCACTTaGATGTGGCCATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTILSFT*MWPLWY
Trigger: GTACCACAATGGCCACATTCAAGTGAATGACAAAAT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 4 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSNLPC*LFPSVD
Trigger: ATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp ACTCCGATCTTAGTAATTCCAAGTGAAAGAACCTTGCTAGTTGTTCTTACTCTGTCAAATCTGCCTTGTTaGCTGTTTCCTTCAGTTGAT +
Preference number: 4 (lower is better)
Translates to: TPILVIPSERTLLVVLTLSNLPC*LFPSVD
Trigger: ATCAACTGAAGGAAACAGTCAACAAGGCAGATTTGA...CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAGATCGGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTACGTGTCGCTTGGTGTTaGTATAAAGGCAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLRVAWC*YKGKSS
Trigger: AGAAGATTTGCCTTTATATCAACACCAAGCGACACG...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATACAAACTCTGAACAATaGACACCACAGGGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNTNSEQ*TPQGFL
Trigger: CAGGAAACCCTGTGGTGTTCATTGTTCAGAGTTTGT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTTTCTGGGAAGGATCTaGAACTCTTTTTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVFLGRI*NSFCAN
Trigger: GTTGGCACAAAAAGAGTTTCAGATCCTTCCCAGAAA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGATTTCTGTCCATTGGATaGGATCTGAGGTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRFLSIG*DLRLLL
Trigger: TAACAGCAACCTCAGATCTCATCCAATGGACAGAAA...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCATGCACTGAAGAATaGGATCCTAACAACATTGCA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSCTEE*DPNNIA
Trigger: TGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATCATGCACTGAAGAATaGGATCCTAACAACATTGCA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSSCTEE*DPNNIA
Trigger: TGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATAGACAGAACCGATTATaGCAAGTACTAGTTCTATCA +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDRQNRL*QVLVLS
Trigger: TGATAGAACTAGTACTTGTCATAATCGGTTCTGTCT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTACGTATTAGTCATGTaGGCGGAGACAGAACCGATT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNYVLVM*AETEPI
Trigger: AATCGGTTCTGTCTCCGCTCACATGACTAATACGTA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGCTTAGTAATTCCAAGTaGAAGAACCTTGCTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSLSNSK*KNLASC
Trigger: ACAACTAGCAAGGTTCTTTCACTTGGAATTACTAAG...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATTGCAAATACAGTCTTaGCATAAATTGGCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTELQIQS*HKLAGL
Trigger: GAGACCTGCCAATTTATGTCAAGACTGTATTTGCAA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGGCCATCTGATTGACTaGATCCTCGTTTCTGATGAA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNGHLID*ILVSDE
Trigger: TTCATCAGAAACGAGGATGCAGTCAATCAGATGGCC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTTCCCTGCACGTTTGTaGCACCAATCTTCAAGATGT +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALIFPARL*HQSSRC
Trigger: ACATCTTGAAGATTGGTGGCACAAACGTGCAGGGAA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGATTTAAGAAAGGAGACTaGTTCTCGGCGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRFKKGD*FSARFS
Trigger: GGAAAATCTCGCCGAGAAGCAGTCTCCTTTCTTAAA...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTTAAGAAAGGAGACTaGTTCTCGGCGAGATTTTCC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSFKKGD*FSARFS
Trigger: GGAAAATCTCGCCGAGAAGCAGTCTCCTTTCTTAAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGATGGTTCATTATCATaGAACCACTGTGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTDGSLS*NHCVPK
Trigger: CTTTGGTACACAGTGGTTGCATGATAATGAACCATC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGATGGTTCATTATCATaGAACCACTGTGTACCAAAG +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEDGSLS*NHCVPK
Trigger: CTTTGGTACACAGTGGTTGCATGATAATGAACCATC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGGCTTTAATCAACCTCTaGAAAACTCCGATCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSALINL*KTPILV
Trigger: TACTAAGATCGGAGTTTTGCAGAGGTTGATTAAAGC...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTTAACCTCTAATATCTaGTCACCAGCCCAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLTSNI*SPAQSL
Trigger: AAGACTTTGGGCTGGTGACCAGATATTAGAGGTTAA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATTATTAGAGGGCCTGTaGACATTTCCATTAGTGATG +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLLEGL*TFPLVM
Trigger: CATCACTAATGGAAATGTCCACAGGCCCTCTAATAA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAATGTTCTGATCCAATaGCGTGTGATTAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTNVLIQ*RVINGQ
Trigger: TTGGCCATTAATCACACGCCATTGGATCAGAACATT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTGACATCCATATTGTaGTCAACCTCTGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSLTSIL*STSVSG
Trigger: TCCTGAGACAGAGGTTGACCACAATATGGATGTCAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTTCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCCTCAACAATTCTCGGTaGACCCCAGTGGCTAAAATT +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALILNNSR*TPVAKI
Trigger: AATTTTAGCCACTGGGGTCCACCGAGAATTGTTGAG...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGACTATGGCGCTTATATTaGTATCTGCTACAACCTGCA +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRLWRLY*YLLQPA
Trigger: TGCAGGTTGTAGCAGATACCAATATAAGCGCCATAG...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATTTGTTTCTGTCCATTaGATGAGATCTGAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSFVSVH*MRSEVA
Trigger: AGCAACCTCAGATCTCATCCAATGGACAGAAACAAA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGGTTCATTTGCTCAGTaGTATGCATTTATATGGCAC +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEGSFAQ*YAFIWH
Trigger: GTGCCATATAAATGCATACCACTGAGCAAATGAACC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGTATCTCTTGTGAACTaGAGGAGACTTTTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSVSLVN*RRLLLD
Trigger: ATCCAACAAAAGTCTCCTTCAGTTCACAAGAGATAC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTTTCACATAAATCCCTaGAGCTTCCCCTGTATGAGA +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALIFHINP*SFPCMR
Trigger: TCTCATACAGGGGAAGCTTCAGGGATTTATGTGAAA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTACCACCAGAAACAATTaGAGAAATATAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVTTRNN*RNIMVP
Trigger: GGGCACCATTATATTTCTTCAATTGTTTCTGGTGGT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGATGGTGAGGGATCTTaGTATAACTCATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSDGEGS*YNSYSS
Trigger: TGAAGAATATGAGTTATATCAAGATCCCTCACCATC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGATGGTGAGGGATCTTaGTATAACTCATATTCTTCA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEDGEGS*YNSYSS
Trigger: TGAAGAATATGAGTTATATCAAGATCCCTCACCATC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTTTCTGGGAAGGATCTaGAACTCTTTTTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNFLGRI*NSFCAN
Trigger: GTTGGCACAAAAAGAGTTTCAGATCCTTCCCAGAAA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCAAGTTCAATAATGTaGAGTTCTCCAGGCAGATCT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSSSIM*SSPGRS
Trigger: AGATCTGCCTGGAGAACTGCACATTATTGAACTTGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTGTGGTACGCAGCACTaGCAGGTATTATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNCGTQH*QVLYFS
Trigger: TGAAAAGTATAATACCTGGCAGTGCTGCGTACCACA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTGGTTCCATATCTGTaGCTGAATTTTTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSLVPYL*LNFSGK
Trigger: CTTCCCAGAAAAATTCAGGCACAGATATGGAACCAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGTTTTCAAGCTGAGCTaGTATGGCGCTTATATTGGT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNVFKLS*YGAYIG
Trigger: ACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAAC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTATTTGCTCAGTGGTATaGATTTATATGGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPICSVV*IYMAQK
Trigger: TTTCTGTGCCATATAAATGCATACCACTGAGCAAAT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGTTGATTTCTTAGCATaGAAAACTTCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTVDFLA*KTSANG
Trigger: CCCATTTGCTGAAGTTTTGCATGCTAAGAAATCAAC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATTTTCTTGGGTATGGTTaGTTTAATCAACCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHFLGYG*FNQPLQ
Trigger: TTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAA...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTAATGTTCTGATCCAATaGCGTGTGATTAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVNVLIQ*RVINGQ
Trigger: TTGGCCATTAATCACACGCCATTGGATCAGAACATT...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTACAAAGTAAAAGGGGGTaGCACTTCTTTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLQSKRG*HFFKKG
Trigger: TCCTTTCTTAAAGAAGTGCCACCCCCTTTTACTTTG...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGGTTCATTTGCTCAGTaGTATGCATTTATATGGCAC +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANGSFAQ*YAFIWH
Trigger: GTGCCATATAAATGCATACCACTGAGCAAATGAACC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCAAAACTTCAGCAAATaGGAGTCTCCTTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNQNFSK*ESPWRS
Trigger: TGATCTCCAAGGAGACTCCCATTTGCTGAAGTTTTG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAAGTAATAATCTTAGGTaGAGGTGTTTCTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSNNLR*RCFCVF
Trigger: GAAGACACAGAAACACCTCCACCTAAGATTATTACT...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCATTTTGTCATTCACTTaGATGTGGCCATTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: WINLILDASYFLGMVALIILSFT*MWPLWY
Trigger: GTACCACAATGGCCACATTCAAGTGAATGACAAAAT...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGGTAATCCAAAATGCTaGATCCCAAACCTTTACAAT +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRGNPKC*IPNLYN
Trigger: ATTGTAAAGGTTTGGGATTCAGCATTTTGGATTACC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCATGCACTGAAGAATaGGATCCTAACAACATTGCA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSCTEE*DPNNIA
Trigger: TGCAATGTTGTTAGGATCTCATTCTTCAGTGCATGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGCTGGGGACACAAACTaGTTACACAATTCTTTATCT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNAGDTN*LHNSLS
Trigger: AGATAAAGAATTGTGTAATCAGTTTGTGTCCCCAGC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613764.4
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCCACAAATATGCTCATaGGTGATCGGTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNPQICS*VIGLYY
Trigger: GTAATAAAGACCGATCACGCATGAGCATATTTGTGG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGTTGATTTCTTAGCATaGAAAACTTCAGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSVDFLA*KTSANG
Trigger: CCCATTTGCTGAAGTTTTGCATGCTAAGAAATCAAC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATAATGTTCTGATCCAATaGCGTGTGATTAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNNVLIQ*RVINGQ
Trigger: TTGGCCATTAATCACACGCCATTGGATCAGAACATT...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CCA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGTCTCAAAGATCCAGTaGTTTGTTGTAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEVSKIQ*FVVIMQ
Trigger: TTGCATTATTACAACAAACCACTGGATCTTTGAGAC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCAAAGTAAAAGGGGGTaGCACTTCTTTAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNQSKRG*HFFKKG
Trigger: TCCTTTCTTAAAGAAGTGCCACCCCCTTTTACTTTG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CCA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CCA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCTTTTTGTTGGGAATaGAAAGACTTTCCCAGATCT +
Preference number: 4 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSFCWE*KDFPRS
Trigger: AGATCTGGGAAAGTCTTTCCATTCCCAACAAAAAGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCATCTGTTGAATGACTaGGTTAAAGTCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNHLLND*VKVFIS
Trigger: GGAAATGAAGACTTTAACTCAGTCATTCAACAGATG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNHLLQY*HPYCGQ
Trigger: TTGACCACAATATGGATGTCAATACTGAAGAAGATG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR TCA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: FITSKAESKSILIFFKFNHLLQY*HPYCGQ
Trigger: TTGACCACAATATGGATGTCAATACTGAAGAAGATG...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR TCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATATGGTAGGGACTCCATaGCAAAATTTTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNMVGTP*QNFLSS
Trigger: TGATGAAAGAAAATTTTGTCATGGAGTCCCTACCAT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGCTTATATTGGTATCTaGTACAACCTGCAGGATAAT +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNAYIGI*YNLQDN
Trigger: ATTATCCTGCAGGTTGTAGCAGATACCAATATAAGC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR GCA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAATTTGCTCAGTGGTATaGATTTATATGGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: IPGDLPGLECNLALLEFRICSVV*IYMAQK
Trigger: TTTCTGTGCCATATAAATGCATACCACTGAGCAAAT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
3UTR CAA 72 bp CATTGGATAAATCTCATTCTTGATGCTAGCTATTTCTaGGGTATGGTTGCTTTAATCAACCTCTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: HWINLILDASYF*GMVALINLCKT
Trigger: AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR GCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATATTTGCTCAGTGGTATaGATTTATATGGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNICSVV*IYMAQK
Trigger: TTTCTGTGCCATATAAATGCATACCACTGAGCAAAT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CCA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGTCTCAAAGATCCAGTaGTTTGTTGTAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNVSKIQ*FVVIMQ
Trigger: TTGCATTATTACAACAAACCACTGGATCTTTGAGAC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAGTGGGCTCCCAGAGCTaGGGGCCTTCGCAGCCTCAC +
Preference number: 5 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLVGSQS*GPSQPH
Trigger: GTGAGGCTGCGAAGGCCCCAAGCTCTGGGAGCCCAC...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCAACCCCCTTGGACCATaGTTGTGTTCCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVNPLGP*LCSLQG
Trigger: ACCCTGAAGGGAACACAACAATGGTCCAAGGGGGTT...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTCTGGGAAACCCCCTaGGACCATTGTTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GPSQPHTMAPWAHFSQTVFWETP*DHCCVP
Trigger: GGGAACACAACAATGGTCCAAGGGGGTTTCCCAGAA...GACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTGCTATGGCGCTTATATaGGTATCTGCTACAACCTGC +
Preference number: 5 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSAMALI*VSATTC
Trigger: GCAGGTTGTAGCAGATACCAATATAAGCGCCATAGC...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS GCA 90 bp CAGGCCAGTGATGACAGGAGCGAAGGAGGGATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTGAAAGAAAGACCCAGGGGTCACCTG +
Preference number: 5 (lower is better)
Translates to: QASDDRSEGGMTAAV*TLLTTLKERPRGHL
Trigger: CAGGTGACCCCTGGGTCTTTCTTTCAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCCTGTCATCACTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS-3UTR CAA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTTTATCTCAACAGTCCTaGGTTCCATATCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSLSQQS*VPYLCL
Trigger: CAGGCACAGATATGGAACCAAGGACTGTTGAGATAA...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp TGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGGCGAACCAAGGTGGTAGCCGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: CFCVFWMVFSSGRTKVVAGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...GGCTACCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTGTGCCAACCAGGTTTaGCAGGCCAGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFCANQV*QASDDR
Trigger: CCTGTCATCACTGGCCTGCAAAACCTGGTTGGCACA...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp AGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCTCTCTCTCTCAGATTTaGTTCTCTTTAAGGGCAACC +
Preference number: 5 (lower is better)
Translates to: RAWGLRSLTRWPPGPTSLSLSQI*FSLRAT
Trigger: GGTTGCCCTTAAAGAGAACAAAATCTGAGAGAGAGA...GAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS TCA 90 bp GGGGGCAGAAGAGTGAGTCAGTCTGATGAGAAGCCATCGACAACCTaGCTGTTCTGTGATGTCGTCCTTGCGGAGGTCCAGGAACCAGCT +
Preference number: 5 (lower is better)
Translates to: GGRRVSQSDEKPSTT*LFCDVVLAEVQEPA
Trigger: AGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGGTTGTCGATGGCTTCTCATCAGACTGACTCACTCTTCTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS GCA 90 bp CACAGGATGATGCAGCATGAAGGCCCTCACCAGATGCTGGCTCCATaGTCTTGGACTTCCCAGCCTCCAGAACAAGGGTGTGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: HRMMQHEGPHQMLAP*SWTSQPPEQGCVFS
Trigger: GGAAAAGACACACCCTTGTTCTGGAGGCTGGGAAGTCCAAGAGCATGGAGCCAGCATCTGGTGAGGGCCTTCATGCTGCATCATCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS GCA 90 bp CGACAGAGAGAGGCCCACATTTTCAGGGCAATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGTCCTCCCGGTTCTTGCCTCTTGAGA +
Preference number: 5 (lower is better)
Translates to: RQREAHIFRAIAIRL*LLGIDSPPGSCLLR
Trigger: TCTCAAGAGGCAAGAACCGGGAGGACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTATTGCCCTGAAAATGTGGGCCTCTCTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493967.1
CDS CCA 90 bp ATGATGCAGCATGAAGGCCCTCACCAGATGCTGGCTCCATGCTCTTaGACTTCCCAGCCTCCAGAACAAGGGTGTGTCTTTTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: MMQHEGPHQMLAPCS*TSQPPEQGCVFSSH
Trigger: GTGGGAGGAAAAGACACACCCTTGTTCTGGAGGCTGGGAAGTCCAAGAGCATGGAGCCAGCATCTGGTGAGGGCCTTCATGCTGCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS-3UTR CAA 90 bp CAGAGCTTGGGGCCTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: QSLGPSQPHTMAPWAHFSFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...AGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAGGCCCCAAGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GTCCAGGGACAATGGGACACGTTGCGGGGTCCACTGACAGAGGAGCCTGGAAACAGTGTGAGTATCTGGTaGAAGAGAGGACTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: VQGQWDTLRGPLTEEPGNSVSIW*KRGLFS
Trigger: ACTAAAGAGTCCTCTCTTCAACCAGATACTCACACT...GTTTCCAGGCTCCTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp AGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTTGCAGCGATGGTCTTCCTGTaGCACCTGGCCAGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: RSNQGLEERVDGDGLPVAAMVFL*HLASCG
Trigger: GCCACAGCTGGCCAGGTGCAACAGGAAGACCATCGC...TGCAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS CCA 90 bp CAGGTGAAAGCTGCCTGGAAAACTATGCCGGAGAAGCAAAATCCCTaGTTTCCCACATCAGACCCTTGGATGCTTCACGCTGCTGACTGT +
Preference number: 5 (lower is better)
Translates to: QVKAAWKTMPEKQNP*FPTSDPWMLHAADC
Trigger: ACAGTCAGCAGCGTGAAGCATCCAAGGGTCTGATGTGGGAAACCAGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAGCTTTCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CAA 90 bp GTAGGCGTTCTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: VGVLQQINHIRVRQPIQRLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...CCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAGAACGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: QPHTMAPWAHFSQTVFLILMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...GATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTGTGCCAACCAGGTTTaGCAGGCCAGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKCANQV*QASDDR
Trigger: CCTGTCATCACTGGCCTGCAAAACCTGGTTGGCACA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAGGCAAGGTGAATCCATaGGGCAATTACAGCATCTCT +
Preference number: 5 (lower is better)
Translates to: SQPHTMAPWAHFSQTVFLGKVNP*GNYSIS
Trigger: AGAGATGCTGTAATTGCCCAATGGATTCACCTTGCC...TAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS GCA 90 bp GCTAGTCCTCAAGCTAAACAGTCACCTCTGTCAGCAGGTGAAAGCTaGCTGGAAAACTATGCCGGAGAAGCAAAATCCCTGGTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: ASPQAKQSPLSAGES*LENYAGEAKSLVSH
Trigger: GTGGGAAACCAGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAGCTTTCACCTGCTGACAGAGGTGACTGTTTAGCTTGAGGACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS-3UTR CAA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTCCCCTTGGACCATTGTaGTGTTCCCTTCAGGGTATC +
Preference number: 5 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPPLGPL*CSLQGI
Trigger: GATACCCTGAAGGGAACACAACAATGGTCCAAGGGG...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCCCCTTGGACCATTGTaGTGTTCCCTTCAGGGTATC +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKPLGPL*CSLQGI
Trigger: GATACCCTGAAGGGAACACAACAATGGTCCAAGGGG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGCTGGCTCCATGCTCTaGGACTTCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSAGSML*DFPASR
Trigger: TCTGGAGGCTGGGAAGTCCAAGAGCATGGAGCCAGC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTCATTCCCTGCACGTTaGTGCCACCAATCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTSFPAR*CHQSSR
Trigger: TCTTGAAGATTGGTGGCACAAACGTGCAGGGAATGA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTAGGCGTTCTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: VGVLQQINHIRVRQPIQRSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...CCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAGAACGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GTAGGCGTTCTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGCCAGGCCTCCTTGCTTaGCTCTATCTCTTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VGVLQQINHIRVRQPIQRPGLLA*LYLFLL
Trigger: CAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTGG...CCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAGAACGCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: QSSRFLPLETRMVHYHATVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTTTTTTAATCATTCCTTaGACTCCGCCGGACTTCGTC +
Preference number: 5 (lower is better)
Translates to: FAASHDGPLGPLLSNCLFFLIIP*TPPDFV
Trigger: GACGAAGTCCGGCGGAGTCAAAGGAATGATTAAAAA...AAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAA
51% GC, longest homopolymer 10 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS TCA 90 bp CCCCCTTGGACCATTGTTGTGTTCCCTTCAGGGTATCTGCATTCCTaGCAAATATCCAATGCTGGACGCAGCTCAAATCCTCACCACAGA +
Preference number: 5 (lower is better)
Translates to: PPWTIVVFPSGYLHS*QISNAGRSSNPHHR
Trigger: TCTGTGGTGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAGGAATGCAGATACCCTGAAGGGAACACAACAATGGTCCAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307297.8
ENST00000635137.1
ENST00000646453.1
CDS GCA 90 bp CTGGGAAACCCCCTTGGACCATTGTTGTGTTCCCTTCAGGGTATCTaGATTCCTGACAAATATCCAATGCTGGACGCAGCTCAAATCCTC +
Preference number: 5 (lower is better)
Translates to: LGNPLGPLLCSLQGI*IPDKYPMLDAAQIL
Trigger: GAGGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAGGAATGCAGATACCCTGAAGGGAACACAACAATGGTCCAAGGGGGTTTCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307297.8
ENST00000635137.1
ENST00000646453.1
CDS CCA 90 bp GTCCTCAAGCTAAACAGTCACCTCTGTCAGCAGGTGAAAGCTGCCTaGAAAACTATGCCGGAGAAGCAAAATCCCTGGTTTCCCACATCA +
Preference number: 5 (lower is better)
Translates to: VLKLNSHLCQQVKAA*KTMPEKQNPWFPTS
Trigger: TGATGTGGGAAACCAGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAGCTTTCACCTGCTGACAGAGGTGACTGTTTAGCTTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS-3UTR CAA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTTCAGAACCAGGGCCCTaGCTGGCTACAGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSSEPGP*LATVGR
Trigger: CCTGCCTACTGTAGCCAGCAAGGGCCCTGGTTCTGA...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCCAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 5 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GTAATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCGAGGAGGAAGTTTCATaGGCGGTGGAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VMIMLVSVTTQCGSHSWCEEEVS*AVEQFL
Trigger: AAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTC...GCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAGAGGAGGAAGTTTCATaGGCGGTGGAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPEEEVS*AVEQFL
Trigger: AAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTC...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GTAGGCGTTCTTCAGCAGATTAACCACATCCGCGTGAGACAGCCCATCCAAAGGTTATCTCAACAGTCCTaGGTTCCATATCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: VGVLQQINHIRVRQPIQRLSQQS*VPYLCL
Trigger: CAGGCACAGATATGGAACCAAGGACTGTTGAGATAA...CCTTTGGATGGGCTGTCTCACGCGGATGTGGTTAATCTGCTGAAGAACGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCTCAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: HTMAPWAHFSQTVFLIIPQPIQR*PVNADN
Trigger: ATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTG...AGGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS TCA 90 bp TCGTTTACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTaGATCATGGCAATAAATACGGGGATATCTCCTAAGGGACTTCCT +
Preference number: 5 (lower is better)
Translates to: SFTLSFCVRAATPLA*IMAINTGISPKGLP
Trigger: AGGAAGTCCCTTAGGAGATATCCCCGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTAAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTTCTGGGAAACCCCCTaGGACCATTGTTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKFWETP*DHCCVP
Trigger: GGGAACACAACAATGGTCCAAGGGGGTTTCCCAGAA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTCGCAGCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: LRSLTRWPPGPTSLKLSFFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...AAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGCTGCGAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGAAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTCAGAACCAGGGCCCTaGCTGGCTACAGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDSEPGP*LATVGR
Trigger: CCTGCCTACTGTAGCCAGCAAGGGCCCTGGTTCTGA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp CCCCAAGCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATT +
Preference number: 5 (lower is better)
Translates to: PQAFRAFLQSNNLRWRCFPGSCL*RLGWFI
Trigger: AATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGG...GAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CCGATCTCCAACTTTAAGCTTCTGTGTCCGTGCGGCCACTCCGCTAGCCTGAATATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: PISNFKLLCPCGHSASLNIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...ATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTTGGAGATCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTCTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTALFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCATTTCTTCTTGGCTaGCCTGAGGTGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSFLLG*PEVFLQ
Trigger: CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS TCA 90 bp GACTACCCTGAAAGAAAGACCCAGGGGTCACCTGTGTGCAGACACTaGCTTGACCCCCTAAATGCATACTTATCCATTAGTGTGCCAATT +
Preference number: 5 (lower is better)
Translates to: DYPERKTQGSPVCRH*LDPLNAYLSISVPI
Trigger: AATTGGCACACTAATGGATAAGTATGCATTTAGGGGGTCAAGTCAGTGTCTGCACACAGGTGACCCCTGGGTCTTTCTTTCAGGGTAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS GCA 90 bp AGCATCCTGACTGAATTCCCACAGTTCCTTAGAACTTGTGCAACTTaGTCACTGGTCATTCCCTGCACGTTTGTGCCACCAATCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SILTEFPQFLRTCAT*SLVIPCTFVPPIFK
Trigger: CTTGAAGATTGGTGGCACAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCACAAGTTCTAAGGAACTGTGGGAATTCAGTCAGGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS GCA 90 bp AGTCTTTCAACCAGTTCTCTCGTTTACTTTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTGAATCATGGCAATAAATACGGGGAT +
Preference number: 5 (lower is better)
Translates to: SLSTSSLVYFKLLCP*GHSASLNHGNKYGD
Trigger: ATCCCCGTATTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTAAACGAGAGAACTGGTTGAAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS GCA 90 bp TGTTGTGTTCCCTTCAGGGTATCTGCATTCCTGACAAATATCCAATaGTGGACGCAGCTCAAATCCTCACCACAGACTCCTCTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CCVPFRVSAFLTNIQ*WTQLKSSPQTPLSS
Trigger: AGAAGAGAGAGGAGTCTGTGGTGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAGGAATGCAGATACCCTGAAGGGAACACAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS CCA 90 bp ATTGTGGTCAACCTCTGTCTCAGGAAGAGAGGTTTCAGTGCGCCTTaGTTCATCTACAGAAGCTTCATCATCAAACAACCTCCGACAGCA +
Preference number: 5 (lower is better)
Translates to: IVVNLCLRKRGFSAP*FIYRSFIIKQPPTA
Trigger: TGCTGTCGGAGGTTGTTTGATGATGAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTCCTGAGACAGAGGTTGACCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635214.1
ENST00000642238.2
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCCCCTTGGACCATTGTaGTGTTCCCTTCAGGGTATC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSPLGPL*CSLQGI
Trigger: GATACCCTGAAGGGAACACAACAATGGTCCAAGGGG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAACCCCCTTGGACCATaGTTGTGTTCCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSNPLGP*LCSLQG
Trigger: ACCCTGAAGGGAACACAACAATGGTCCAAGGGGGTT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTCTGGGAAACCCCCTaGGACCATTGTTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFWETP*DHCCVP
Trigger: GGGAACACAACAATGGTCCAAGGGGGTTTCCCAGAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTAGTCCCTGTGCACACTaGAGGATGGTGGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPSPCAH*RMVATV
Trigger: GACAGTGGCCACCATCCTCAAGTGTGCACAGGGACT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTATCTATATATTCAATTaGCCGGCCCTGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFIYIFN*PALSHL
Trigger: CAGATGGCTCAGGGCCGGCAAATTGAATATATAGAT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTCACAACCACGCCACTaGTTTTTCCTCCAACTATTC +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKSQPRH*FFLQLF
Trigger: GAATAGTTGGAGGAAAAACAAGTGGCGTGGTTGTGA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATCAGAACCAGGGCCCTaGCTGGCTACAGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSSEPGP*LATVGR
Trigger: CCTGCCTACTGTAGCCAGCAAGGGCCCTGGTTCTGA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCTTCCACCAAAGGCTTACAGATGCCAAGGTGTACTAGGCCTGGTGGCACAGCTGACCACCAGAAACAATaGAAGAAATATAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: SSTKGLQMPRCTRPGGTADHQKQ*KKYNGA
Trigger: GGCACCATTATATTTCTTCAATTGTTTCTGGTGGTC...AGCTGTGCCACCAGGCCTAGTACACCTTGGCATCTGTAAGCCTTTGGTGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGTCGTCAAATCTGCCTaGTTGACTGTTTCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFVVKSA*LTVSFS
Trigger: ACTGAAGGAAACAGTCAACAAGGCAGATTTGACGAC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGACCTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: LADLCRVVLGLLPPFPKTLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...GGTCTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTAATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCCGGTGGAGCAGTTCCTaGCCTCTTTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VMIMLVSVTTQCGSHSWCRWSSS*PLFFLF
Trigger: GAAAAGAAAGAAAAGAGGCAAGGAACTGCTCCACCG...GCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTCAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATQPIQR*PVNADN
Trigger: ATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTG...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGACTTGAGACAAAACTaGCTGATCTCTGCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKDLRQN*LISAVW
Trigger: CCACACGGCAGAGATCAGCAAGTTTTGTCTCAAGTC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTGCTCCCTTAGGTTCTaGCAGTCCATGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQCSLRF*QSMLLA
Trigger: GGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS GCA 90 bp CATCCATATTGTGGTCAACCTCTGTCTCAGGAAGAGAGGTTTCAGTaGGCCTTGGTTCATCTACAGAAGCTTCATCATCAAACAACCTCC +
Preference number: 5 (lower is better)
Translates to: HPYCGQPLSQEERFQ*ALVHLQKLHHQTTS
Trigger: GGAGGTTGTTTGATGATGAAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCTCTCTTCCTGAGACAGAGGTTGACCACAATATGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635214.1
ENST00000642238.2
CDS CCA 90 bp GGCAGAGTTGTATCATTTAGGCTGCTAGAAGTACTGCTTTTTGTGTaGACTGGTTCCCTGGCCACAATCAGTCTCAAAGATCCAGTGGTT +
Preference number: 5 (lower is better)
Translates to: GRVVSFRLLEVLLFV*TGSLATISLKDPVV
Trigger: AACCACTGGATCTTTGAGACTGATTGTGGCCAGGGAACCAGTCCACACAAAAAGCAGTACTTCTAGCAGCCTAAATGATACAACTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGACAATGGGACACGTaGCGGGGTCCACTGACAGAG +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGQWDT*RGPLTE
Trigger: CTCTGTCAGTGGACCCCGCAACGTGTCCCATTGTCC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCCTCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: ASHDGPLGPLLSNCLFNHSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...ATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGGAGTTGACCCTTCAGTaGCTTGATGGACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLELTLQ*LDGLLK
Trigger: CTTCAGCAGTCCATCAAGCAACTGAAGGGTCAACTC...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGTCATTCCCTGCACGTTaGTGCCACCAATCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKSFPAR*CHQSSR
Trigger: TCTTGAAGATTGGTGGCACAAACGTGCAGGGAATGA...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAAGGTTTCAGTGCGCCTaGGTTCATCTACAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKRFQCA*VHLQKL
Trigger: AAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCT...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTTCAGCAAGTGAGGTGTaGTCCAAACAGTATTCATTG +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFSASEV*SKQYSL
Trigger: CAATGAATACTGTTTGGACAACACCTCACTTGCTGA...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCACAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACGAGGAGGAAGTTTCATaGGCGGTGGAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYEEEVS*AVEQFL
Trigger: AAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTC...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAGGAGGAAGTTTCATaGGCGGTGGAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCREEEVS*AVEQFL
Trigger: AAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTGATCTGAAACTCTTTTaGTGCCAACCAGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFDLKLF*CQPGFA
Trigger: TGCAAAACCTGGTTGGCACAAAAAGAGTTTCAGATC...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCACACGATGGCCCCCTGGGCCCACTTCTCTCAAACTGTCTTTTTAATCATTCCGATCTGAAACTCTTTTaGTGCCAACCAGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SHDGPLGPLLSNCLFNHSDLKLF*CQPGFA
Trigger: TGCAAAACCTGGTTGGCACAAAAAGAGTTTCAGATC...GGAATGATTAAAAAGACAGTTTGAGAGAAGTGGGCCCAGGGGGCCATCGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGCTAGGCTCAATTCATTaGCTCACTTTGCAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLGSIH*LTLQLS
Trigger: ACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAG...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTCATTTCTTCTTGGCTaGCCTGAGGTGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVSFLLG*PEVFLQ
Trigger: CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp TTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCGTTTGGAAGAAAGAGTaGATGGCGATGGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: FKWGEATKVWKKELMAMVVWKKE*MAMVFL
Trigger: CAGGAAGACCATCGCCATCAACTCTTTCTTCCAAAC...GACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp CTGGTGGCACAGCTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: LVAQLSIFPQLQQVRCCPNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...TGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAGCTGTGCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTCTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAG +
Preference number: 5 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSSVMSS*RRSRNQ
Trigger: CTGGTTCCTGGACCTCCGCAAGGACGACATCACAGA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGAGTTGACCCTTCAGTaGCTTGATGGACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQELTLQ*LDGLLK
Trigger: CTTCAGCAGTCCATCAAGCAACTGAAGGGTCAACTC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAGTTGACCCTTCAGTaGCTTGATGGACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRELTLQ*LDGLLK
Trigger: CTTCAGCAGTCCATCAAGCAACTGAAGGGTCAACTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAGGGTATATGGTTGAGTaGACCCTTCAGTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKGYMVE*TLQLLD
Trigger: ATCAAGCAACTGAAGGGTCAACTCAACCATATACCC...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAGACAAAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCTAGAAAAATCAAAGTaGGCTGAACAATCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ETKLADLCRVVLGLLPPFLEKSK*AEQSEG
Trigger: ACCCTCAGATTGTTCAGCCAACTTTGATTTTTCTAG...AAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGTCATTCCCTGCACGTTaGTGCCACCAATCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQSFPAR*CHQSSR
Trigger: TCTTGAAGATTGGTGGCACAAACGTGCAGGGAATGA...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCAGAACCAGGGCCCTaGCTGGCTACAGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSEPGP*LATVGR
Trigger: CCTGCCTACTGTAGCCAGCAAGGGCCCTGGTTCTGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GATCCCCTCGTTTTAATCGGCCGTCATCTGCAGCTGCTCCCTTTGCAAATACAGTCATCTTCTTCAGTATaGACATCCATATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: DPLVLIGRHLQLLPLQIQSSSSV*TSILWS
Trigger: TGACCACAATATGGATGTCAATACTGAAGAAGATGA...CTGTATTTGCAAAGGGAGCAGCTGCAGATGACGGCCGATTAAAACGAGGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 5 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATTSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp CTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTGAGGGATCTTGATATACCAGGCCTCCTTGCTTaGCTCTATCTCTTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: LECATRDTTPWMVRDLDIPGLLA*LYLFLL
Trigger: CAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTGG...TATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATT +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQPGSCL*RLGWFI
Trigger: AATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTGAGGGATCTTGATATAGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LECATRDTTPWMVRDLDIDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...TATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCREQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 5 (lower is better)
Translates to: VGRSNQGLEERVDGDGLPVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...AGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACG +
Preference number: 5 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVWLPVI*LALLCT
Trigger: CGTACATAACAAGGCCAACAAAATCACCGGTAACCA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp ATGATTATGCTAGTCAGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTATTGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACG +
Preference number: 5 (lower is better)
Translates to: MIMLVSVTTQCGSHSWCYWLPVI*LALLCT
Trigger: CGTACATAACAAGGCCAACAAAATCACCGGTAACCA...ATAGCACCACGAATGGGACCCACATTGGGTCGTAACACTGACTAGCATAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp ATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTAAGCTTCTGCGGTGGAGCAGTTCCTaGCCTCTTTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: IQRLPVNADNPISNFKLLRWSSS*PLFFLF
Trigger: GAAAAGAAAGAAAAGAGGCAAGGAACTGCTCCACCG...CAGAAGCTTAAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATGTGCCAACCAGGTTTaGCAGGCCAGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTECANQV*QASDDR
Trigger: CCTGTCATCACTGGCCTGCAAAACCTGGTTGGCACA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTGTGCCAACCAGGTTTaGCAGGCCAGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTCANQV*QASDDR
Trigger: CCTGTCATCACTGGCCTGCAAAACCTGGTTGGCACA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATGCTCCCTTAGGTTCTaGCAGTCCATGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLCSLRF*QSMLLA
Trigger: GGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCGGGTTTCATTTCTTCTaGGCTTGCCTGAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVGFHFF*ACLRCS
Trigger: AGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCC...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAGTCCTCCCGGTTCTTGCCTCTTGAGACTCGGATGGTTCATTATCATGCAACCGTATTGACATCCATATaGTGGTCAACCTCTTATACT +
Preference number: 5 (lower is better)
Translates to: QSSRFLPLETRMVHYHATVLTSI*WSTSYT
Trigger: AGTATAAGAGGTTGACCACAATATGGATGTCAATAC...GGTTGCATGATAATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TGGATGAAAAAGGCAGATCCCAACTCCCACAGCACGTCTTTACCGTTTCCCAACTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WMKKADPNSHSTSLPFPNFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...GTTGGGAAACGGTAAAGACGTGCTGTGGGAGTTGGGATCTGCCTTTTTCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAGTTGACCCTTCAGTaGCTTGATGGACTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQELTLQ*LDGLLK
Trigger: CTTCAGCAGTCCATCAAGCAACTGAAGGGTCAACTC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATCCAAGGCCTCCAGTaGAAGGCCGTTCTATATCTA +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRIQGLQ*KAVLYL
Trigger: TAGATATAGAACGGCCTTCAACTGGAGGCCTTGGAT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAATCCAAGGCCTCCAGTaGAAGGCCGTTCTATATCTA +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQIQGLQ*KAVLYL
Trigger: TAGATATAGAACGGCCTTCAACTGGAGGCCTTGGAT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGAACTTTTCCGAGATTTaGACTTCTGAGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRNFSEI*TSEGHH
Trigger: GTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGAACTTTTCCGAGATTTaGACTTCTGAGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLNFSEI*TSEGHH
Trigger: GTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTT...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGAAGGTTTCAGTGCGCCTaGGTTCATCTACAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGRFQCA*VHLQKL
Trigger: AAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCT...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GCTCATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGTCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 5 (lower is better)
Translates to: AHDSTVKVTVPLWCFRMASSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...CGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGTTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCCAGGCCTCCTTGCTTaGCTCTATCTCTTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRPGLLA*LYLFLL
Trigger: CAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTGG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATT +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSPGSCL*RLGWFI
Trigger: AATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCAACCTCTGCAAAACTCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATT +
Preference number: 5 (lower is better)
Translates to: LDASYFLGMVALINLCKTPGSCL*RLGWFI
Trigger: AATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGG...AGTTTTGCAGAGGTTGATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCCAGTCCTCCCGGTTCTaGCCTCTTGAGACTCGGATG +
Preference number: 5 (lower is better)
Translates to: WINLILDASYFLGMVALIQSSRF*PLETRM
Trigger: CATCCGAGTCTCAAGAGGCAAGAACCGGGAGGACTG...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTGAGGGATCTTGATATATGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACG +
Preference number: 5 (lower is better)
Translates to: LECATRDTTPWMVRDLDIWLPVI*LALLCT
Trigger: CGTACATAACAAGGCCAACAAAATCACCGGTAACCA...TATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTGTGCCAACCAGGTTTaGCAGGCCAGTGATGACAGG +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANCANQV*QASDDR
Trigger: CCTGTCATCACTGGCCTGCAAAACCTGGTTGGCACA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGAGCTATGGCGCTTATATaGGTATCTGCTACAACCTGC +
Preference number: 5 (lower is better)
Translates to: EPFSKVIILGGGVSVSSGAMALI*VSATTC
Trigger: GCAGGTTGTAGCAGATACCAATATAAGCGCCATAGC...TCCAGAAGACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp AAACTTGCTGATCTCTGCCGTGTGGTTCTGGGGCTTCTACCTCCTTTTCCTAAGATCTGGTATTTCATCTaGGGGATCACTGGTAAATTA +
Preference number: 5 (lower is better)
Translates to: KLADLCRVVLGLLPPFPKIWYFI*GITGKL
Trigger: TAATTTACCAGTGATCCCCAAGATGAAATACCAGAT...CTTAGGAAAAGGAGGTAGAAGCCCCAGAACCACACGGCAGAGATCAGCAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTAATATGTCACCCACTTaGCATAAGGCCAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPNMSPT*HKAKAT
Trigger: GGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGAATATGTCACCCACTTaGCATAAGGCCAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQNMSPT*HKAKAT
Trigger: GGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATT...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTGCTCCCTTAGGTTCTaGCAGTCCATGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNCSLRF*QSMLLA
Trigger: GGCCAGCAGCATGGACTGCAAGAACCTAAGGGAGCA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS CCA 90 bp TTGTGTGGACTGGTTCCCTGGCCACAATCAGTCTCAAAGATCCAGTaGTTTGTTGTAATAATGCAATTGCTTGCTGATGGGAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: LCGLVPWPQSVSKIQ*FVVIMQLLADGKCS
Trigger: AGAACATTTCCCATCAGCAAGCAATTGCATTATTACAACAAACCACTGGATCTTTGAGACTGATTGTGGCCAGGGAACCAGTCCACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp ATACACTGTTTCTTTTCAAACCCCACATCCTCACCACCTGTTTCTTTGAGCACCAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: IHCFFSNPTSSPPVSLSTNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...GGTGCTCAAAGAAACAGGTGGTGAGGATGTGGGGTTTGAAAAGAAACAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACTGATGAAAACCAGCTaGACCTTTGATGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLMKTS*TFDGAV
Trigger: GACTGCCCCATCAAAGGTCAAGCTGGTTTTCATCAG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp AGACAGCCCATCCAAAGGTTGCCCGTTAATGCTGACAATCCGATCTCCAACTTTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: RQPIQRLPVNADNPISNFFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...AAAGTTGGAGATCGGATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTATCCAAGGCCTCCAGTaGAAGGCCGTTCTATATCTA +
Preference number: 5 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSIQGLQ*KAVLYL
Trigger: TAGATATAGAACGGCCTTCAACTGGAGGCCTTGGAT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTAGGTTTCAGTGCGCCTaGGTTCATCTACAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPRFQCA*VHLQKL
Trigger: AAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCT...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 5 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYTSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRTSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGGTGTTGATATAAAGGCAAATCTTCTTGCTCCCTCCTTTGAGCCACAACAGTCAGCAAGTGAGGTGTaGTCCAAACAGTATTCATTG +
Preference number: 5 (lower is better)
Translates to: LGVDIKANLLAPSFEPQQSASEV*SKQYSL
Trigger: CAATGAATACTGTTTGGACAACACCTCACTTGCTGA...CTGTTGTGGCTCAAAGGAGGGAGCAAGAAGATTTGCCTTTATATCAACACCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAATCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKSSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATCCCGGTTCTTGCCTCTaGAGACTCGGATGGTTCATT +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANPGSCL*RLGWFI
Trigger: AATGAACCATCCGAGTCTCAAGAGGCAAGAACCGGG...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGTCGTCAAATCTGCCTaGTTGACTGTTTCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRVVKSA*LTVSFS
Trigger: ACTGAAGGAAACAGTCAACAAGGCAGATTTGACGAC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSEQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGTGTATGCTGAGGCCTaGGAAATAACTCGTGTCGCT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTVYAEA*EITRVA
Trigger: AGCGACACGAGTTATTTCCAAGGCCTCAGCATACAC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp TTTAAGTGGGGAGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: FKWGEATKVWKKELMAMVLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...GACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCTCCCCACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATCGGTGGAGCAGTTCCTaGCCTCTTTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDRWSSS*PLFFLF
Trigger: GAAAAGAAAGAAAAGAGGCAAGGAACTGCTCCACCG...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGAGGAGGAAGTTTCATaGGCGGTGGAGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANEEEVS*AVEQFL
Trigger: AAGGAACTGCTCCACCGCCAATGAAACTTCCTCCTC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp AGAAGCAACCAAGGTTTGGAAGAAAGAGTTGATGGCGATGGTCTTCCTGTTGCATCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: RSNQGLEERVDGDGLPVASLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...TGCAACAGGAAGACCATCGCCATCAACTCTTTCTTCCAAACCTTGGTTGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp GTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTCTGGATGGTGTTCAGCAGTGGATCTGAAACTCTTTTaGTGCCAACCAGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: VIILGGGVSVSSGWCSAVDLKLF*CQPGFA
Trigger: TGCAAAACCTGGTTGGCACAAAAAGAGTTTCAGATC...CACTGCTGAACACCATCCAGAAGACACAGAAACACCTCCACCTAAGATTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGGTTTCATTTCTTCTaGGCTTGCCTGAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQGFHFF*ACLRCS
Trigger: AGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ACCTCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGCCAAGTGAAAGAACCTaGCTAGTTGTTCTTACTCTG +
Preference number: 5 (lower is better)
Translates to: TSSILSPVLSAFVFPAGLPSERT*LVVLTL
Trigger: CAGAGTAAGAACAACTAGCAAGGTTCTTTCACTTGG...CAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTGATAACTATAGCATTTaGCCCTTCAACTTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSDNYSI*PFNFCH
Trigger: GTGACAGAAGTTGAAGGGCAAAATGCTATAGTTATC...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTGGGTATATGGTTGAGTaGACCCTTCAGTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPGYMVE*TLQLLD
Trigger: ATCAAGCAACTGAAGGGTCAACTCAACCATATACCC...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATGGGTATATGGTTGAGTaGACCCTTCAGTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDGYMVE*TLQLLD
Trigger: ATCAAGCAACTGAAGGGTCAACTCAACCATATACCC...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTATCTATATATTCAATTaGCCGGCCCTGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSIYIFN*PALSHL
Trigger: CAGATGGCTCAGGGCCGGCAAATTGAATATATAGAT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAATCCAAGGCCTCCAGTaGAAGGCCGTTCTATATCTA +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSIQGLQ*KAVLYL
Trigger: TAGATATAGAACGGCCTTCAACTGGAGGCCTTGGAT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAAACTTTTCCGAGATTTaGACTTCTGAGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSNFSEI*TSEGHH
Trigger: GTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTTCACAACCACGCCACTaGTTTTTCCTCCAACTATTC +
Preference number: 5 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSSQPRH*FFLQLF
Trigger: GAATAGTTGGAGGAAAAACAAGTGGCGTGGTTGTGA...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAATCATTCCCTGCACGTTaGTGCCACCAATCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTESFPAR*CHQSSR
Trigger: TCTTGAAGATTGGTGGCACAAACGTGCAGGGAATGA...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGGTTTCAGTGCGCCTaGGTTCATCTACAGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTRFQCA*VHLQKL
Trigger: AAGCTTCTGTAGATGAACCAAGGCGCACTGAAACCT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGTATTGACATCCATATaGTGGTCAACCTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRVLTSI*WSTSVS
Trigger: TGAGACAGAGGTTGACCACAATATGGATGTCAATAC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TATAACAGTTTGTCCACCAACAATACTGATCCCAAGAGACACATTGGGTTCTCTACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 5 (lower is better)
Translates to: YNSLSTNNTDPKRHIGFSTSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...AGAGAACCCAATGTGTCTCTTGGGATCAGTATTGTTGGTGGACAAACTGTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTCAGCAAGTGAGGTGTaGTCCAAACAGTATTCATTG +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSASEV*SKQYSL
Trigger: CAATGAATACTGTTTGGACAACACCTCACTTGCTGA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTAAACAACAACATCTATCTTGTGATCAGGCCCGAGGCTCATGACAGCACAGTTTTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 5 (lower is better)
Translates to: LNNNIYLVIRPEAHDSTVLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...AACTGTGCTGTCATGAGCCTCGGGCCTGATCACAAGATAGATGTTGTTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAATTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGACTGTTTCCTTCAGTaGATGGTACAGATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEDCFLQ*MVQMVG
Trigger: CCCTACCATCTGTACCATCAACTGAAGGAAACAGTC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGGTCGTCAAATCTGCCTaGTTGACTGTTTCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSVVKSA*LTVSFS
Trigger: ACTGAAGGAAACAGTCAACAAGGCAGATTTGACGAC...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFREQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLEQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGAATGTGCGACAAGGGATACAACTCCATGGATGGTGAGGGATCTTGATATAATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: LECATRDTTPWMVRDLDIIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...TATATCAAGATCCCTCACCATCCATGGAGTTGTATCCCTTGTCGCACATTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TGTAGACATGTTTTCAAGCTGAGCTGCTATGGCGCTTATATTGGTATCTGCTACCTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: CRHVFKLSCYGAYIGICYLFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...GTAGCAGATACCAATATAAGCGCCATAGCAGCTCAGCTTGAAAACATGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACGGTGGAGCAGTTCCTaGCCTCTTTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSRWSSS*PLFFLF
Trigger: GAAAAGAAAGAAAAGAGGCAAGGAACTGCTCCACCG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTTCAATATTTCCACAGCTTCAGCAAGTGAGGTGTTGTCCAAACAGTATTCATCGGTGGAGCAGTTCCTaGCCTCTTTTCTTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSIFPQLQQVRCCPNSIHRWSSS*PLFFLF
Trigger: GAAAAGAAAGAAAAGAGGCAAGGAACTGCTCCACCG...ATGAATACTGTTTGGACAACACCTCACTTGCTGAAGCTGTGGAAATATTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGGATCTGAAACTCTTTTaGTGCCAACCAGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKDLKLF*CQPGFA
Trigger: TGCAAAACCTGGTTGGCACAAAAAGAGTTTCAGATC...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTTATCTCAACAGTCCTaGGTTCCATATCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQLSQQS*VPYLCL
Trigger: CAGGCACAGATATGGAACCAAGGACTGTTGAGATAA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGACAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFRQPIQR*PVNADN
Trigger: ATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTG...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTCAGCCCATCCAAAGGTaGCCCGTTAATGCTGACAAT +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVQPIQR*PVNADN
Trigger: ATTGTCAGCATTAACGGGCAACCTTTGGATGGGCTG...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGCTATGGCGCTTATATaGGTATCTGCTACAACCTGC +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEAMALI*VSATTC
Trigger: GCAGGTTGTAGCAGATACCAATATAAGCGCCATAGC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CATGACAGCACAGTTAAGGTTACAGTCCCTCTCTGGTGTTTTAGAATGGCGACTGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 5 (lower is better)
Translates to: HDSTVKVTVPLWCFRMATEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...AGTCGCCATTCTAAAACACCAGAGAGGGACTGTAACCTTAACTGTGCTGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000484937.5
CDS-3UTR CAA 90 bp ATTTGGGAAATTCACATGAAACCTCAGCCATTTCTCCTGAGCAGAGAGGGCAAGGAGAATAAGGTTCATTaGCTCAGTGGTATGCATTTA +
Preference number: 5 (lower is better)
Translates to: IWEIHMKPQPFLLSREGKENKVH*LSGMHL
Trigger: TAAATGCATACCACTGAGCAAATGAACCTTATTCTC...CTTGCCCTCTCTGCTCAGGAGAAATGGCTGAGGTTTCATGTGAATTTCCCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGACTTGAGACAAAACTaGCTGATCTCTGCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVDLRQN*LISAVW
Trigger: CCACACGGCAGAGATCAGCAAGTTTTGTCTCAAGTC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGACTTGAGACAAAACTaGCTGATCTCTGCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSDLRQN*LISAVW
Trigger: CCACACGGCAGAGATCAGCAAGTTTTGTCTCAAGTC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAATATGTCACCCACTTaGCATAAGGCCAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFRNMSPT*HKAKAT
Trigger: GGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGCTAGGCTCAATTCATTaGCTCACTTTGCAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRLGSIH*LTLQLS
Trigger: ACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAG...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCATTTCTTCTTGGCTaGCCTGAGGTGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSFLLG*PEVFLQ
Trigger: CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGGGTTTCATTTCTTCTaGGCTTGCCTGAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTGFHFF*ACLRCS
Trigger: AGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TTTCCTGCATTCTTAATGGCCTCAACTGCTTCGCTGTGTGAGGCATTCTGCAAAATATATCAGTCTGGATaGATTGGACTTGGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: FPAFLMASTASLCEAFCKIYQSG*IGLGVL
Trigger: TAGAACTCCAAGTCCAATCAATCCAGACTGATATAT...TTTGCAGAATGCCTCACACAGCGAAGCAGTTGAGGCCATTAAGAATGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS GCA 90 bp GGACCTAATGAATTTCTAAAGGTATCAAGTTTATCTAATGCATCTTaGCCTCAGCCTGGGTCTCTGATGGCTACTGGAATTCCAACTTTA +
Preference number: 5 (lower is better)
Translates to: GPNEFLKVSSLSNAS*PQPGSLMATGIPTL
Trigger: TAAAGTTGGAATTCCAGTAGCCATCAGAGACCCAGGCTGAGGGCAAGATGCATTAGATAAACTTGATACCTTTAGAAATTCATTAGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATTGGCTGACAGCCAGTTaGAAGCTTTCACTTTCAGGC +
Preference number: 5 (lower is better)
Translates to: FITSKAESKSILIFFKFNWLTAS*KLSLSG
Trigger: GCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAGCCA...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCCAAACAACCATTTATTAAATGGGGAACTTTCTCCCAGTGGGGGCAGAAGAGTTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: SKQPFIKWGTFSQWGQKSFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...ACTCTTCTGCCCCCACTGGGAGAAAGTTCCCCATTTAATAAATGGTTGTTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000307297.8
CDS-3UTR CAA 90 bp GCCTTCAGAGCCTTTCTCCAAAGTAATAATCTTAGGTGGAGGTGTTTCTGTGTCTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: AFRAFLQSNNLRWRCFCVFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...GACACAGAAACACCTCCACCTAAGATTATTACTTTGGAGAAAGGCTCTGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATAGTGTGAGTATCTGGTaGAAGAGAGGACTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDSVSIW*KRGLFS
Trigger: ACTAAAGAGTCCTCTCTTCAACCAGATACTCACACT...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAGGGTATATGGTTGAGTaGACCCTTCAGTTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSGYMVE*TLQLLD
Trigger: ATCAAGCAACTGAAGGGTCAACTCAACCATATACCC...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGCTAGAAAAATCAAAGTaGGCTGAACAATCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKLEKSK*AEQSEG
Trigger: ACCCTCAGATTGTTCAGCCAACTTTGATTTTTCTAG...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATCACAACCACGCCACTaGTTTTTCCTCCAACTATTC +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSSQPRH*FFLQLF
Trigger: GAATAGTTGGAGGAAAAACAAGTGGCGTGGTTGTGA...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGGACCACCAGAAACAATaGAAGAAATATAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRDHQKQ*KKYNGA
Trigger: GGCACCATTATATTTCTTCAATTGTTTCTGGTGGTC...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAACTAGTTCAACAATCTaGACTTCAGGGGACCACAGT +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTETSSTI*TSGDHS
Trigger: ACTGTGGTCCCCTGAAGTCAAGATTGTTGAACTAGT...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRSSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TTTATTACCAGCAAGGCTGAGTCCAAGTCCATTCTTATCTTTTTCAAGTTCAATGAGCAAGCTAGGACCTaGGACATCATTCGGGATCAT +
Preference number: 5 (lower is better)
Translates to: FITSKAESKSILIFFKFNEQART*DIIRDH
Trigger: ATGATCCCGAATGATGTCCAAGGTCCTAGCTTGCTC...ATTGAACTTGAAAAAGATAAGAATGGACTTGGACTCAGCCTTGCTGGTAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp GCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGACGCTGTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: ASLKLSLSGNCLIPTSTLLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...CAGCGTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACG +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSWLPVI*LALLCT
Trigger: CGTACATAACAAGGCCAACAAAATCACCGGTAACCA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp AGTGTTACGACCCAATGTGGGTCCCATTCGTGGTGCTATATTATAAAAGAACAACTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SVTTQCGSHSWCYIIKEQLFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...TTGTTCTTTTATAATATAGCACCACGAATGGGACCCACATTGGGTCGTAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKSLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAATCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQSLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCATTTCTTCTTGGCTaGCCTGAGGTGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANSFLLG*PEVFLQ
Trigger: CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTCATTTCTTCTTGGCTaGCCTGAGGTGTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVSFLLG*PEVFLQ
Trigger: CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGGGTTTCATTTCTTCTaGGCTTGCCTGAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVGFHFF*ACLRCS
Trigger: AGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GTAATCCTGGAAGTGACTTCTTTGCAGAAACAGGTTTTAAGTGGGGAGAAGCAACTGGAAGTGACTTCTTaGCAGAAACAGGTTTTAAGT +
Preference number: 5 (lower is better)
Translates to: VILEVTSLQKQVLSGEKQLEVTS*QKQVLS
Trigger: ACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAG...TTGCTTCTCCCCACTTAAAACCTGTTTCTGCAAAGAAGTCACTTCCAGGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000494842.2
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTCTCTCTCTCAGATTTaGTTCTCTTTAAGGGCAACC +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPSLSQI*FSLRAT
Trigger: GGTTGCCCTTAAAGAGAACAAAATCTGAGAGAGAGA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS CCA 90 bp GCTAATTCCCCATCATCATCTTCTTCAGTATTGACATCCATATTGTaGTCAACCTCTTATACTTCAATGAGTTCTCTGTCTCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: ANSPSSSSSVLTSIL*STSYTSMSSLSQEE
Trigger: CTCTTCCTGAGACAGAGAACTCATTGAAGTATAAGAGGTTGACCACAATATGGATGTCAATACTGAAGAAGATGATGATGGGGAATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TCAAGTATTTTATCTCCAGTTTTAAGTGCGTTCGTCTTCCCTGCTGGACTGTCTTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: SSILSPVLSAFVFPAGLSFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...AGACAGTCCAGCAGGGAAGACGAACGCACTTAAAACTGGAGATAAAATACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTAGTGTGAGTATCTGGTaGAAGAGAGGACTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSVSIW*KRGLFS
Trigger: ACTAAAGAGTCCTCTCTTCAACCAGATACTCACACT...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATATCTATATATTCAATTaGCCGGCCCTGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANIYIFN*PALSHL
Trigger: CAGATGGCTCAGGGCCGGCAAATTGAATATATAGAT...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATAACTTTTCCGAGATTTaGACTTCTGAGGGCCACCAC +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNNFSEI*TSEGHH
Trigger: GTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGACCACCAGAAACAATaGAAGAAATATAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQDHQKQ*KKYNGA
Trigger: GGCACCATTATATTTCTTCAATTGTTTCTGGTGGTC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGTATTGACATCCATATaGTGGTCAACCTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSVLTSI*WSTSVS
Trigger: TGAGACAGAGGTTGACCACAATATGGATGTCAATAC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCCAAACAGTATTCATaGACTGAGACCAGGCGGTCT +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSKQYS*TETRRS
Trigger: AGACCGCCTGGTCTCAGTCAATGAATACTGTTTGGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATTCATCTCTAAATCCCTaGGGTGCTTCGAGTATTAAA +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDSSLNP*GASSIK
Trigger: TTTAATACTCGAAGCACCCAAGGGATTTAGAGATGA...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GAAAGGCAATTACGTATTAGTCATGTGAGCGGAGACAGAACCGATTATGACAAGTTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 5 (lower is better)
Translates to: ERQLRISHVSGDRTDYDKLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...CTTGTCATAATCGGTTCTGTCTCCGCTCACATGACTAATACGTAATTGCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATCCAGGCCTCCTTGCTTaGCTCTATCTCTTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNPGLLA*LYLFLL
Trigger: CAACAAAAAGAGATAGAGCAAAGCAAGGAGGCCTGG...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGTCGTCAAATCTGCCTaGTTGACTGTTTCCTTCAGT +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANVVKSA*LTVSFS
Trigger: ACTGAAGGAAACAGTCAACAAGGCAGATTTGACGAC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp AAATATAATCAAATATGTCACCCACTTTGCATAAGGCCAAGGCCACCTAGACCTTTACCGGTGATTTTGTaGGCCTTGTTATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: KYNQICHPLCIRPRPPRPLPVIL*ALLCTL
Trigger: TAACGTACATAACAAGGCCAACAAAATCACCGGTAA...AGGTCTAGGTGGCCTTGGCCTTATGCAAAGTGGGTGACATATTTGATTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTTGGTTACCGGTGATTTaGTTGGCCTTGTTATGTACG +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVWLPVI*LALLCT
Trigger: CGTACATAACAAGGCCAACAAAATCACCGGTAACCA...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCACTTTTCTTTCTTTTCTaGGGTGTCCTGGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSLFFLF*GVLVLV
Trigger: AACCAGAACCAGGACACCCAAGAAAAGAAAGAAAAG...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
CDS-3UTR CAA 90 bp CTGACAGCCAGTTTGAAGCTTTCACTTTCAGGCAATTGTTTAATACCAACTTCGTCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LTASLKLSLSGNCLIPTSSLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...CGAAGTTGGTATTAAACAATTGCCTGAAAGTGAAAGCTTCAAACTGGCTGTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTATCTCAACAGTCCTaGGTTCCATATCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANLSQQS*VPYLCL
Trigger: CAGGCACAGATATGGAACCAAGGACTGTTGAGATAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGGATCTGGTATTTCATCTaGGGGATCACTGGTAAATTA +
Preference number: 5 (lower is better)
Translates to: QVLFGFHFFLACLRCSCRIWYFI*GITGKL
Trigger: TAATTTACCAGTGATCCCCAAGATGAAATACCAGAT...CCTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GGGTGCTTTTCATACCCACTCAGAACTTCATCTGCCTGTGGATATTCTAAACAAGAGATCCTAACAACATaGCACATCTTGGATACATTA +
Preference number: 5 (lower is better)
Translates to: GCFSYPLRTSSACGYSKQEILTT*HILDTL
Trigger: TAATGTATCCAAGATGTGCAATGTTGTTAGGATCTC...TTGTTTAGAATATCCACAGGCAGATGAAGTTCTGAGTGGGTATGAAAAGCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAAGTGTGAGTATCTGGTaGAAGAGAGGACTCTTTAGT +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFRSVSIW*KRGLFS
Trigger: ACTAAAGAGTCCTCTCTTCAACCAGATACTCACACT...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCTAGAAAAATCAAAGTaGGCTGAACAATCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLEKSK*AEQSEG
Trigger: ACCCTCAGATTGTTCAGCCAACTTTGATTTTTCTAG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATATCTATATATTCAATTaGCCGGCCCTGAGCCATCTG +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNIYIFN*PALSHL
Trigger: CAGATGGCTCAGGGCCGGCAAATTGAATATATAGAT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCACAACCACGCCACTaGTTTTTCCTCCAACTATTC +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSQPRH*FFLQLF
Trigger: GAATAGTTGGAGGAAAAACAAGTGGCGTGGTTGTGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAGTATTGACATCCATATaGTGGTCAACCTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLVLTSI*WSTSVS
Trigger: TGAGACAGAGGTTGACCACAATATGGATGTCAATAC...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGTCATCTTCTTCAGTATaGACATCCATATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQSSSSV*TSILWS
Trigger: TGACCACAATATGGATGTCAATACTGAAGAAGATGA...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp TCAAGTTTTATTTGGGTTTCATTTCTTCTTGGCTTGCCTGAGGTGTTCTTGCAGCCTGAAAATTCAGTCTaGTCTTCATTACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: SSFIWVSFLLGLPEVFLQPENSV*SSLLLE
Trigger: TTCAAGCAGTAATGAAGACAAGACTGAATTTTCAGG...CTGCAAGAACACCTCAGGCAAGCCAAGAAGAAATGAAACCCAAATAAAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAATCCCAAGAGACACATaGGGTTCTCTAAAAATCTCA +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSIPRDT*GSLKIS
Trigger: TGAGATTTTTAGAGAACCCAATGTGTCTCTTGGGAT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATGATCTGAAACTCTTTTaGTGCCAACCAGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANDLKLF*CQPGFA
Trigger: TGCAAAACCTGGTTGGCACAAAAAGAGTTTCAGATC...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTCCGATTAGTGATGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 5 (lower is better)
Translates to: AVLFFLAYFPLMLIPISDEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...ATCACTAATCGGAATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTACTAGGCTCAATTCATTaGCTCACTTTGCAGCTAAGT +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLLGSIH*LTLQLS
Trigger: ACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAG...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATAATGGCAGATGCATTTaGGTGACTTCTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNNGRCI*VTSSIQ
Trigger: CTGTATGGAAGAAGTCACCAAAATGCATCTGCCATT...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATTCACTTTCAGGCAATaGTTTAATACCAACTTCGAC +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSFTFRQ*FNTNFD
Trigger: GTCGAAGTTGGTATTAAACAATTGCCTGAAAGTGAA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGCCCTGAACGTCCCTaGGATATTTCTATAATCATT +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLSPERP*DISIII
Trigger: AATGATTATAGAAATATCCAAGGGACGTTCAGGGCT...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGAGACCACCAGAAACAATaGAAGAAATATAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFRDHQKQ*KKYNGA
Trigger: GGCACCATTATATTTCTTCAATTGTTTCTGGTGGTC...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGTATTGACATCCATATaGTGGTCAACCTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNVLTSI*WSTSVS
Trigger: TGAGACAGAGGTTGACCACAATATGGATGTCAATAC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTCATCTTCTTCAGTATaGACATCCATATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTSSSSV*TSILWS
Trigger: TGACCACAATATGGATGTCAATACTGAAGAAGATGA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATTCAGCAAGTGAGGTGTaGTCCAAACAGTATTCATTG +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNSASEV*SKQYSL
Trigger: CAATGAATACTGTTTGGACAACACCTCACTTGCTGA...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTCCTGAAAATTCAGTCTaGTCTTCATTACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTPENSV*SSLLLE
Trigger: TTCAAGCAGTAATGAAGACAAGACTGAATTTTCAGG...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTTTGCTCTATCTCTTTTaGTTGGGAATGGAAAGACTT +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTLLYLF*LGMERL
Trigger: AAGTCTTTCCATTCCCAACAAAAAGAGATAGAGCAA...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
CDS-3UTR CAA 90 bp ATGCATTTTCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTATCTTTGTCTGATTTTTaGGTCGGTAAAGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: MHFHHIFLGSIHLLTLQLSLSDF*VGKGIF
Trigger: GAAGATGCCTTTACCGACCAAAAAATCAGACAAAGA...TAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGAAAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp GGTGTTCTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCAATCTGGTATTTCATCTaGGGGATCACTGGTAAATTA +
Preference number: 5 (lower is better)
Translates to: GVLAGTINTKCSEGSSFSIWYFI*GITGKL
Trigger: TAATTTACCAGTGATCCCCAAGATGAAATACCAGAT...TGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAGAACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp GCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAGATCCTAACAACATaGCACATCTTGGATACATTA +
Preference number: 5 (lower is better)
Translates to: AGTINTKCSEGSSFSCTEEILTT*HILDTL
Trigger: TAATGTATCCAAGATGTGCAATGTTGTTAGGATCTC...TTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTGCAGGTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAGATCCTAACAACATaGCACATCTTGGATACATTA +
Preference number: 5 (lower is better)
Translates to: LAGTINTKCSEGSSFSCTEILTT*HILDTL
Trigger: TAATGTATCCAAGATGTGCAATGTTGTTAGGATCTC...AGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTACCTGCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000613764.4
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp CTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCAGAGATCCTAACAACATaGCACATCTTGGATACATTA +
Preference number: 5 (lower is better)
Translates to: LTHTNIQQFYSSWLTSLSEILTT*HILDTL
Trigger: TAATGTATCCAAGATGTGCAATGTTGTTAGGATCTC...TGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTCATGCTAATTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: IQTFSSFILPGLLPSHANFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...ATTAGCATGAGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTTTTTGTTGGATATTTTaGCTGTTTCATCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSFCWIF*LFHLAD
Trigger: GTCAGCCAGATGAAACAGCAAAAATATCCAACAAAA...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCCTAGAAAAATCAAAGTaGGCTGAACAATCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: WINLILDASYFLGMVALILEKSK*AEQSEG
Trigger: ACCCTCAGATTGTTCAGCCAACTTTGATTTTTCTAG...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATTCCAGGTGATCTTCCTGGACTTGAATGTAATTTAGCACTGTTAGAATTCAGATCATCTTCTTCAGTATaGACATCCATATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: IPGDLPGLECNLALLEFRSSSSV*TSILWS
Trigger: TGACCACAATATGGATGTCAATACTGAAGAAGATGA...TCTGAATTCTAACAGTGCTAAATTACATTCAAGTCCAGGAAGATCACCTGGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTCCTGAAAATTCAGTCTaGTCTTCATTACTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVPENSV*SSLLLE
Trigger: TTCAAGCAGTAATGAAGACAAGACTGAATTTTCAGG...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371158.6
ENST00000642238.2
CDS-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCGTGATTTTGTTGGCCTaGTTATGTACGTTAGGAATG +
Preference number: 5 (lower is better)
Translates to: WINLILDASYFLGMVALIVILLA*LCTLGM
Trigger: CATTCCTAACGTACATAACAAGGCCAACAAAATCAC...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp ATCTTACACATACAAACATTCAGCAGTTTTATTCTTCCTGGCTTACTTCCCTCTGAGAATAAGGTTCATTaGCTCAGTGGTATGCATTTA +
Preference number: 5 (lower is better)
Translates to: ILHIQTFSSFILPGLLPSENKVH*LSGMHL
Trigger: TAAATGCATACCACTGAGCAAATGAACCTTATTCTC...AGAGGGAAGTAAGCCAGGAAGAATAAAACTGCTGAATGTTTGTATGTGTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TCATCACATATTCCTAGGCTCAATTCATTTGCTCACTTTGCAGCTAAGTATGTTGAGAATAAGGTTCATTaGCTCAGTGGTATGCATTTA +
Preference number: 5 (lower is better)
Translates to: SSHIPRLNSFAHFAAKYVENKVH*LSGMHL
Trigger: TAAATGCATACCACTGAGCAAATGAACCTTATTCTC...AACATACTTAGCTGCAAAGTGAGCAAATGAATTGAGCCTAGGAATATGTGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371158.6
ENST00000642238.2
ENST00000646453.1
CDS-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCGATGCTAGCTATTTCTaGGGTATGGTTGCTTTAATC +
Preference number: 5 (lower is better)
Translates to: WINLILDASYFLGMVALIDASYF*GMVALI
Trigger: GATTAAAGCAACCATACCCAAGAAATAGCTAGCATC...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp TGGATAAATCTCATTCTTGATGCTAGCTATTTCTTGGGTATGGTTGCTTTAATCTCATCTTCTTCAGTATaGACATCCATATTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: WINLILDASYFLGMVALISSSSV*TSILWS
Trigger: TGACCACAATATGGATGTCAATACTGAAGAAGATGA...GATTAAAGCAACCATACCCAAGAAATAGCTAGCATCAAGAATGAGATTTATCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS-3UTR CAA 90 bp GTACAATTAACACAAAATGTTCTGAGGGTAGTAGCTTTTCATGCACTGAAGAATGAGATGATTGTTGATTaGGGAAATTCACATGAAACC +
Preference number: 5 (lower is better)
Translates to: VQLTQNVLRVVAFHALKNEMIVD*GNSHET
Trigger: GGTTTCATGTGAATTTCCCAAATCAACAATCATCTC...ATTCTTCAGTGCATGAAAAGCTACTACCCTCAGAACATTTTGTGTTAATTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000484937.5
ENST00000642238.2
ENST00000646453.1
CDS CAA 72 bp GACTCCGCCGGACTTCGTCGTCCCCATGACCTGGTGTaGGGTCTGATCACCCCAACAGCAGTGGGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: DSAGLRRPHDLV*GLITPTAVGKV
Trigger: CACCTTGCCCACTGCTGTTGGGGTGATCAGACCCAACACCAGGTCATGGGGACGACGAAGTCCGGCGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635137.1
CDS CCA 72 bp CCAGCACTTCGGGAGGCCGAGATGGGAGATGGGAGATaGGAGATGCTTGACCCCAGGAGTTCAAGACCAGCC +
Preference number: 6 (lower is better)
Translates to: PALREAEMGDGR*EMLDPRSSRPA
Trigger: GGCTGGTCTTGAACTCCTGGGGTCAAGCATCTCCCATCTCCCATCTCCCATCTCGGCCTCCCGAAGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493967.1
CDS GCA 72 bp ATGCAGCATGAAGGCCCTCACCAGATGCTGGCTCCATaGTCTTGGACTTCCCAGCCTCCAGAACAAGGGTGT +
Preference number: 6 (lower is better)
Translates to: MQHEGPHQMLAP*SWTSQPPEQGC
Trigger: ACACCCTTGTTCTGGAGGCTGGGAAGTCCAAGAGCATGGAGCCAGCATCTGGTGAGGGCCTTCATGCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS GCA 72 bp GAGGCCCACATTTTCAGGGCAATAGCCATACGGCTGTaGCTCCTGGGAATAGACAGTCCTCCCGGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: EAHIFRAIAIRL*LLGIDSPPGSC
Trigger: GCAAGAACCGGGAGGACTGTCTATTCCCAGGAGGCACAGCCGTATGGCTATTGCCCTGAAAATGTGGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493967.1
CDS CAA 90 bp GCTGCTGTGTGCACTCTGCTGACTGACTGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAGCTCGGAGTCTTCCAATCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: AAVCTLLTDCSVMSS*RRSRNQLGVFQSLA
Trigger: AGCTAGAGATTGGAAGACTCCGAGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGTCAGCAGAGTGCACACAGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS GCA 72 bp GATGACAGGAGCGAAGGAGGGATGACAGCTGCTGTGTaGACTCTGCTGACTACCCTGAAAGAAAGACCCAGG +
Preference number: 6 (lower is better)
Translates to: DDRSEGGMTAAV*TLLTTLKERPR
Trigger: CCTGGGTCTTTCTTTCAGGGTAGTCAGCAGAGTGCACACAGCAGCTGTCATCCCTCCTTCGCTCCTGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS CCA 72 bp CATGAAGGCCCTCACCAGATGCTGGCTCCATGCTCTTaGACTTCCCAGCCTCCAGAACAAGGGTGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: HEGPHQMLAPCS*TSQPPEQGCVF
Trigger: AAAGACACACCCTTGTTCTGGAGGCTGGGAAGTCCAAGAGCATGGAGCCAGCATCTGGTGAGGGCCTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS CAA 72 bp AGCCATCGACAACCTGACTGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAGCTCGGAGTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: SHRQPDCSVMSS*RRSRNQLGVFQ
Trigger: TTGGAAGACTCCGAGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGGTTGTCGATGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS CAA 72 bp TCTGCTGACTACCCTGACTGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAGCTCGGAGTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: SADYPDCSVMSS*RRSRNQLGVFQ
Trigger: TTGGAAGACTCCGAGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGGGTAGTCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371158.6
ENST00000635137.1
ENST00000642238.2
ENST00000646453.1
CDS CAA 72 bp TGCACTCTGCTGACTGACTGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAGCTCGGAGTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: CTLLTDCSVMSS*RRSRNQLGVFQ
Trigger: TTGGAAGACTCCGAGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGTCAGCAGAGTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484937.5
CDS CAA 90 bp CTGATGAGAAGCCATCGACAACCTGACTGTTCTGTGATGTCGTCCTaGCGGAGGTCCAGGAACCAGCTCGGAGTCTTCCAATCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: LMRSHRQPDCSVMSS*RRSRNQLGVFQSLA
Trigger: AGCTAGAGATTGGAAGACTCCGAGCTGGTTCCTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGGTTGTCGATGGCTTCTCATCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS TCA 72 bp TTTGCCCTTCAACTTCTGTCACAGGATGATGCAGCATaGAGGCCCTCACCAGATGCTGGCTCCATGCTCTTG +
Preference number: 6 (lower is better)
Translates to: FALQLLSQDDAA*RPSPDAGSMLL
Trigger: CAAGAGCATGGAGCCAGCATCTGGTGAGGGCCTTCATGCTGCATCATCCTGTGACAGAAGTTGAAGGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS TCA 72 bp AGAGTGAGTCAGTCTGATGAGAAGCCATCGACAACCTaGCTGTTCTGTGATGTCGTCCTTGCGGAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RVSQSDEKPSTT*LFCDVVLAEVQ
Trigger: CTGGACCTCCGCAAGGACGACATCACAGAACAGTCAGGTTGTCGATGGCTTCTCATCAGACTGACTCACTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000465798.2
CDS CCA 72 bp GCTGCCTGGAAAACTATGCCGGAGAAGCAAAATCCCTaGTTTCCCACATCAGACCCTTGGATGCTTCACGCT +
Preference number: 6 (lower is better)
Translates to: AAWKTMPEKQNP*FPTSDPWMLHA
Trigger: AGCGTGAAGCATCCAAGGGTCTGATGTGGGAAACCAGGGATTTTGCTTCTCCGGCATAGTTTTCCAGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646453.1
CDS TCA 72 bp ACTATAGCATTTTGCCCTTCAACTTCTGTCACAGGATaGTGCAGCATGAAGGCCCTCACCAGATGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: TIAFCPSTSVTG*CSMKALTRCWL
Trigger: GAGCCAGCATCTGGTGAGGGCCTTCATGCTGCATCATCCTGTGACAGAAGTTGAAGGGCAAAATGCTATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307297.8
ENST00000635214.1
CDS GCA 72 bp GATCTGATCTCCCTGAATCAATCTCCCATCCAGGTCTaGGGCTCCGCCTTTCACGATGTCAGAAATAAACAC +
Preference number: 6 (lower is better)
Translates to: DLISLNQSPIQV*GSAFHDVRNKH
Trigger: GTGTTTATTTCTGACATCGTGAAAGGCGGAGCCGCAGACCTGGATGGGAGATTGATTCAGGGAGATCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307297.8
ENST00000371158.6
ENST00000465798.2
ENST00000484937.5
ENST00000635137.1
ENST00000642238.2
ENST00000646453.1
CDS GCA 72 bp CCCTTCAGGGTATCTGCATTCCTGACAAATATCCAATaGTGGACGCAGCTCAAATCCTCACCACAGACTCCT +
Preference number: 6 (lower is better)
Translates to: PFRVSAFLTNIQ*WTQLKSSPQTP
Trigger: AGGAGTCTGTGGTGAGGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAGGAATGCAGATACCCTGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS CCA 72 bp TTTGTGCCACCAATCTTCAAGATGTGGTCCCCTGTCTaGAGTCTTCCATCTCGATCTGCTAATCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: FVPPIFKMWSPV*SLPSRSANPPG
Trigger: TCCTGGAGGATTAGCAGATCGAGATGGAAGACTCCAGACAGGGGACCACATCTTGAAGATTGGTGGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CAA 90 bp CGCAGCTCAAATCCTCACCACAGACTCCTCTCTCTTCTGACGACCTaGGGCCTATTTTTCTCTCTCTCTCTCTCTCTCTCTCTCAGATTT +
Preference number: 6 (lower is better)
Translates to: RSSNPHHRLLSLLTT*GLFFSLSLSLSLRF
Trigger: AAATCTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAATAGGCCCAAGGTCGTCAGAAGAGAGAGGAGTCTGTGGTGAGGATTTGAGCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS TCA 72 bp TTCACGCCATCGACAGCAACTATTTTGTCATTCACTTaGATGTGGCCATTGTGGTACGCAGCACTGCCAGGT +
Preference number: 6 (lower is better)
Translates to: FTPSTATILSFT*MWPLWYAALPG
Trigger: ACCTGGCAGTGCTGCGTACCACAATGGCCACATTCAAGTGAATGACAAAATAGTTGCTGTCGATGGCGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS GCA 72 bp ACTGAATTCCCACAGTTCCTTAGAACTTGTGCAACTTaGTCACTGGTCATTCCCTGCACGTTTGTGCCACCA +
Preference number: 6 (lower is better)
Translates to: TEFPQFLRTCAT*SLVIPCTFVPP
Trigger: TGGTGGCACAAACGTGCAGGGAATGACCAGTGAGCAAGTTGCACAAGTTCTAAGGAACTGTGGGAATTCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS GCA 72 bp ACCAGTTCTCTCGTTTACTTTAAGCTTCTGTGTCCGTaGGGCCACTCCGCTAGCCTGAATCATGGCAATAAA +
Preference number: 6 (lower is better)
Translates to: TSSLVYFKLLCP*GHSASLNHGNK
Trigger: TTTATTGCCATGATTCAGGCTAGCGGAGTGGCCGCACGGACACAGAAGCTTAAAGTAAACGAGAGAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472512.2
CDS CCA 72 bp AAACAACCTCCGACAGCAAACCAAAGTAAAAGGGGGTaGCACTTCTTTAAGAAAGGAGACTGCTTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: KQPPTANQSKRG*HFFKKGDCFSA
Trigger: CGCCGAGAAGCAGTCTCCTTTCTTAAAGAAGTGCCACCCCCTTTTACTTTGGTTTGCTGTCGGAGGTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS GCA 72 bp GATAACTTCTCATTCTGCGACGTGTCACCCTTCTCCTaGAATTTCATTTTCAGGCGATCAAGTACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: DNFSFCDVSPFS*NFIFRRSSTCS
Trigger: GCTGCAGGTACTTGATCGCCTGAAAATGAAATTGCAGGAGAAGGGTGACACGTCGCAGAATGAGAAGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CAA 72 bp GACATCCTTCACGAAGATATCAACTTTTCCGAGATTTaGACTTCTGAGGGCCACCACACTGAATCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: DILHEDINFSEI*TSEGHHTESKA
Trigger: GGCCTTGGATTCAGTGTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTTGATATCTTCGTGAAGGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS TCA 72 bp ACCATTGTTGTGTTCCCTTCAGGGTATCTGCATTCCTaGCAAATATCCAATGCTGGACGCAGCTCAAATCCT +
Preference number: 6 (lower is better)
Translates to: TIVVFPSGYLHS*QISNAGRSSNP
Trigger: AGGATTTGAGCTGCGTCCAGCATTGGATATTTGTCAGGAATGCAGATACCCTGAAGGGAACACAACAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307297.8
ENST00000635137.1
ENST00000646453.1
CDS TCA 72 bp ACATCCTTCACGAAGATATCAACTTTTCCGAGATTTTaGCTTCTGAGGGCCACCACACTGAATCCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: TSFTKISTFPRF*LLRATTLNPRP
Trigger: AGGCCTTGGATTCAGTGTGGTGGCCCTCAGAAGTCAAAATCTCGGAAAAGTTGATATCTTCGTGAAGGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CCA 72 bp CTGGTTCCCTGGCCACAATCAGTCTCAAAGATCCAGTaGTTTGTTGTAATAATGCAATTGCTTGCTGATGGG +
Preference number: 6 (lower is better)
Translates to: LVPWPQSVSKIQ*FVVIMQLLADG
Trigger: CCCATCAGCAAGCAATTGCATTATTACAACAAACCACTGGATCTTTGAGACTGATTGTGGCCAGGGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CAA 90 bp CTGGCTGTAGGAGACCCAATGTATCAACAGGACCACCAGAAACAATaGAAGAAATATAATGGTGCCCATCAAAGGAATCCACTTCCACAC +
Preference number: 6 (lower is better)
Translates to: LAVGDPMYQQDHQKQ*KKYNGAHQRNPLPH
Trigger: GTGTGGAAGTGGATTCCTTTGATGGGCACCATTATATTTCTTCAATTGTTTCTGGTGGTCCTGTTGATACATTGGGTCTCCTACAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS GCA 72 bp CATTCACTTGAATGTGGCCATTGTGGTACGCAGCACTaGCAGGTATTATACTTTTCACATAAATCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: HSLECGHCGTQH*QVLYFSHKSLK
Trigger: CTTCAGGGATTTATGTGAAAAGTATAATACCTGGCAGTGCTGCGTACCACAATGGCCACATTCAAGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS TCA 72 bp CGTAATACTTCAACAACATCATGGTTGGCAAAACCCTaGATGTTCACGCCATCGACAGCAACTATTTTGTCA +
Preference number: 6 (lower is better)
Translates to: RNTSTTSWLAKP*MFTPSTATILS
Trigger: TGACAAAATAGTTGCTGTCGATGGCGTGAACATTCAGGGTTTTGCCAACCATGATGTTGTTGAAGTATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS TCA 72 bp GAGACCCAATGTATCAACAGGACCACCAGAAACAATTaGAGAAATATAATGGTGCCCATCAAAGGAATCCAC +
Preference number: 6 (lower is better)
Translates to: ETQCINRTTRNN*RNIMVPIKGIH
Trigger: GTGGATTCCTTTGATGGGCACCATTATATTTCTTCAATTGTTTCTGGTGGTCCTGTTGATACATTGGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS TCA 72 bp ACAGTGCTAATTCCCCATCATCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAACCTCTGTCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: TVLIPHHHLLQY*HPYCGQPLSQE
Trigger: TTCCTGAGACAGAGGTTGACCACAATATGGATGTCAATACTGAAGAAGATGATGATGGGGAATTAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635214.1
ENST00000642238.2
CDS CAA 72 bp GGAGACCCAATGTATCAACAGGACCACCAGAAACAATaGAAGAAATATAATGGTGCCCATCAAAGGAATCCA +
Preference number: 6 (lower is better)
Translates to: GDPMYQQDHQKQ*KKYNGAHQRNP
Trigger: TGGATTCCTTTGATGGGCACCATTATATTTCTTCAATTGTTTCTGGTGGTCCTGTTGATACATTGGGTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000484937.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CAA 90 bp CTTGGGCCTATTTTTCTCTCTCTCTCTCTCTCTCTCTCTCAGATTTaGTTCTCTTTAAGGGCAACCTGTCAATCTATTTATATCAGGAAA +
Preference number: 6 (lower is better)
Translates to: LGPIFLSLSLSLSQI*FSLRATCQSIYIRK
Trigger: TTTCCTGATATAAATAGATTGACAGGTTGCCCTTAAAGAGAACAAAATCTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAATAGGCCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1
CDS CAA 90 bp AGTGCTAATTCCCCATCATCATCTTCTTCAGTATTGACATCCATATaGTGGTCAACCTCTTATACTTCAATGAGTTCTCTGTCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: SANSPSSSSSVLTSI*WSTSYTSMSSLSQE
Trigger: TTCCTGAGACAGAGAACTCATTGAAGTATAAGAGGTTGACCACAATATGGATGTCAATACTGAAGAAGATGATGATGGGGAATTAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS CCA 72 bp TGCAATTGCTTGCTGATGGGAAATGTTCTGATCCAATaGCGTGTGATTAATGGCCAATATTTGATCATTTTC +
Preference number: 6 (lower is better)
Translates to: CNCLLMGNVLIQ*RVINGQYLIIF
Trigger: GAAAATGATCAAATATTGGCCATTAATCACACGCCATTGGATCAGAACATTTCCCATCAGCAAGCAATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316485.11
ENST00000371158.6
ENST00000459752.5
ENST00000484562.5
ENST00000613764.4
ENST00000635023.1
ENST00000635214.1
ENST00000642238.2
CDS CAA 72 bp TCCCCATCATCATCTTCTTCAGTATTGACATCCATATaGTGGTCAACCTCTTATACTTCAATGAGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SPSSSSSVLTSI*WSTSYTSMSSL
Trigger: CAGAGAACTCATTGAAGTATAAGAGGTTGACCACAATATGGATGTCAATACTGAAGAAGATGATGATGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS TCA 72 bp ACAGTGCTAATTCCCCATCATCATCTTCTTCAGTATTaGCATCCATATTGTGGTCAACCTCTTATACTTCAA +
Preference number: 6 (lower is better)
Translates to: TVLIPHHHLLQY*HPYCGQPLILQ
Trigger: TTGAAGTATAAGAGGTTGACCACAATATGGATGTCAATACTGAAGAAGATGATGATGGGGAATTAGCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635023.1
CDS CAA 72 bp ATTTTTCTCTCTCTCTCTCTCTCTCTCTCTCAGATTTaGTTCTCTTTAAGGGCAACCTGTCAATCTATTTAT +
Preference number: 6 (lower is better)
Translates to: IFLSLSLSLSQI*FSLRATCQSIY
Trigger: ATAAATAGATTGACAGGTTGCCCTTAAAGAGAACAAAATCTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635137.1
ENST00000646453.1