Pregenerated sensors for PATE3 (Homo sapiens)
Ensembl gene IDs: ENSG00000236027Ensembl transcript IDs: ENST00000445202.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTGTGAAGGATaGGCAACATTGGGGACATTCCAAAGCGAGACCTCAGGAGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: RTDTEGKQGPAECEG*ATLGTFQSETSGGQ Trigger: TTGCCCTCCTGAGGTCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTTCACACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 90 bp | TATTGTCAGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTGTaGAGGATGAGCAACATTGGGGACATTCCAAAGCGAGACCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: YCQDRHGREARASRV*RMSNIGDIPKRDLR Trigger: CCTGAGGTCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTTCACACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCTGACAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 90 bp | AGTCTCAAGAAAGCTGTACAGGGTAGATGGTATCTTGACTATGTTTaGCTCCCTTTGATGACGGATCCTGAAAGGCAGCCCACCCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: SLKKAVQGRWYLDYV*LPLMTDPERQPTLG Trigger: ACCTAGGGTGGGCTGCCTTTCAGGATCCGTCATCAAAGGGAGTCAAACATAGTCAAGATACCATCTACCCTGTACAGCTTTCTTGAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 90 bp | GGTTTATTACTTAAAGATGGGCAGCAAGGGACAGACAAATCTCTTTaGCCCAGGCCCCCAAGTCTCAAGAAAGCTGTACAGGGTAGATGG | + |
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Preference number: 1 (lower is better) Translates to: GLLLKDGQQGTDKSL*PRPPSLKKAVQGRW Trigger: CCATCTACCCTGTACAGCTTTCTTGAGACTTGGGGGCCTGGGTCAAAGAGATTTGTCTGTCCCTTGCTGCCCATCTTTAAGTAATAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 90 bp | CCAATAATAGAAGAAATCCATTGTTCAGAACCACTATTCTCTGACTaGGGGAGAAGCCAAGCTGAAGACACCAGAAAGGATCACACTAGT | + |
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Preference number: 1 (lower is better) Translates to: PIIEEIHCSEPLFSD*GRSQAEDTRKDHTS Trigger: ACTAGTGTGATCCTTTCTGGTGTCTTCAGCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCTGAACAATGGATTTCTTCTATTATTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR GCA 90 bp | AGTGTACCTGAACTAGTTAAGCAAATTAAGATTCTAGAATGTTCCTaGTTTAAATTTTACTGTACAGGAACTCTTGGGGCAGGTTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: SVPELVKQIKILECS*FKFYCTGTLGAGFL Trigger: CAAGAAACCTGCCCCAAGAGTTCCTGTACAGTAAAATTTAAAGCAGGAACATTCTAGAATCTTAATTTGCTTAACTAGTTCAGGTACACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCATCTGACGCATGGGGCAAAGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGGGAGAAGCCAAGCTaGAGACACCAGAAAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: CHLTHGAKLRRTSCLSTGREKPS*RHQKGS Trigger: TGATCCTTTCTGGTGTCTTCAGCTTGGCTTCTCCCT...CCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCTTTGCCCCATGCGTCAGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCATCTGACGCATGGGGCAAAGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAACCACTATTCTCTaGCTGAGGGAGAAGCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: CHLTHGAKLRRTSCLSTGRTTIL*LREKPS Trigger: GCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCT...CCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCTTTGCCCCATGCGTCAGATGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAGCAGAGTGTGAAGGATaGGCAACATTGGGGACATTC | + |
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Preference number: 2 (lower is better) Translates to: SFEGPPASLQGEVVWQWGAECEG*ATLGTF Trigger: GAATGTCCCCAATGTTGCTCATCCTTCACACTCTGC...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCAGGGGTATTGTCAGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTAAGGATGAGCAACATTaGGGACATTCCAAAGCGAGA | + |
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Preference number: 2 (lower is better) Translates to: RAGVLSGQTRKGSKGQQSKDEQH*GHSKAR Trigger: TCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTT...ACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCTGACAATACCCCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAAGTTCTGATGTACCTTaGATGTACATCTCGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFEGPPASLQGEVVWQWGSSDVP*MYISIG Trigger: TCCTATCGAGATGTACATTCAAGGTACATCAGAACT...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CCA 90 bp | AAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCTGGTAGAAATAACTTGTTGGGGCAGGTTTCTTaGAATATGGCCATGCCAATA | + |
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Preference number: 2 (lower is better) Translates to: KSQWLSLKWALPAGRNNLLGQVS*NMAMPI Trigger: TATTGGCATGGCCATATTCCAAGAAACCTGCCCCAA...CAAGTTATTTCTACCAGCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR CAA 90 bp | TCCTGCTTTAAATTTTACTGTACAGGAACTCTTGGGGCAGGTTTCTaGGAATATGGCCATGCCAATAATCCCAATAATAGAAGAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: SCFKFYCTGTLGAGF*EYGHANNPNNRRNP Trigger: TGGATTTCTTCTATTATTGGGATTATTGGCATGGCCATATTCCAAGAAACCTGCCCCAAGAGTTCCTGTACAGTAAAATTTAAAGCAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAGCGAGGGCAGGGGTATaGTCAGGACAGACACGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SFEGPPASLQGEVVWQWGARAGV*SGQTRK Trigger: CTTCCGTGTCTGTCCTGACAATACCCCTGCCCTCGC...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR GCA 72 bp | CATCTGACGCATGGGGCAAAGCTTCGAAGGACCTCCTaGCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: HLTHGAKLRRTS*LSTGRGCVAMG Trigger: CCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCTTTGCCCCATGCGTCAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGACTTGGGGCAGGTTTCTaGGAATATGGCCATGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: SFEGPPASLQGEVVWQWGLGAGF*EYGHAN Trigger: ATTGGCATGGCCATATTCCAAGAAACCTGCCCCAAG...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 72 bp | CTCGATAGGAGTAGCAGTGGCTGTGTGAGAGCTCGGTaGATGTCACAGAGGCCGGGAAGATCCTTGTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LDRSSSGCVRAR*MSQRPGRSLFA Trigger: AGCAAACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTGCTACTCCTATCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR CCA 72 bp | AGCAAGGGCCAGCAGAGTGTGAAGGATGAGCAACATTaGGGACATTCCAAAGCGAGACCTCAGGAGGGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SKGQQSVKDEQH*GHSKARPQEGK Trigger: TTTGCCCTCCTGAGGTCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTTCACACTCTGCTGGCCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAGCTGGTAGAAATAACTaGGTGTCCGTAGAGAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: SFEGPPASLQGEVVWQWGAGRNN*VSVEKN Trigger: ATTTTTCTCTACGGACACCAAGTTATTTCTACCAGC...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 72 bp | CTTAAAGATGGGCAGCAAGGGACAGACAAATCTCTTTaGCCCAGGCCCCCAAGTCTCAAGAAAGCTGTACAG | + |
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Preference number: 3 (lower is better) Translates to: LKDGQQGTDKSL*PRPPSLKKAVQ Trigger: CTGTACAGCTTTCTTGAGACTTGGGGGCCTGGGTCAAAGAGATTTGTCTGTCCCTTGCTGCCCATCTTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 72 bp | AAAGCTGTACAGGGTAGATGGTATCTTGACTATGTTTaGCTCCCTTTGATGACGGATCCTGAAAGGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: KAVQGRWYLDYV*LPLMTDPERQP Trigger: GGGCTGCCTTTCAGGATCCGTCATCAAAGGGAGTCAAACATAGTCAAGATACCATCTACCCTGTACAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGTAAATGCCAAGAAAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCACTGTACAGGAACTCTaGGGGCAGGTTTCTTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: FVNAKKITMVEFEVGTACTVQEL*GQVSWN Trigger: ATTCCAAGAAACCTGCCCCAAGAGTTCCTGTACAGT...GCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTTTCTTGGCATTTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR TCA 72 bp | GAAGAAATCCATTGTTCAGAACCACTATTCTCTGACTaGGGGAGAAGCCAAGCTGAAGACACCAGAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: EEIHCSEPLFSD*GRSQAEDTRKD Trigger: ATCCTTTCTGGTGTCTTCAGCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCTGAACAATGGATTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR GCA 72 bp | GAACTAGTTAAGCAAATTAAGATTCTAGAATGTTCCTaGTTTAAATTTTACTGTACAGGAACTCTTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: ELVKQIKILECS*FKFYCTGTLGA Trigger: TGCCCCAAGAGTTCCTGTACAGTAAAATTTAAAGCAGGAACATTCTAGAATCTTAATTTGCTTAACTAGTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR GCA 72 bp | ATCTTCAGTATCCATCATCCATTTAATTGCTATTTCTaGTTAGTCATTCTCCGGATACATGGGAATTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: IFSIHHPFNCYF*LVILRIHGNFR Trigger: TCTAAAATTCCCATGTATCCGGAGAATGACTAAGCAGAAATAGCAATTAAATGGATGATGGATACTGAAGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGGGTATTGTCAGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTCATGCCTCGCCCTTCTaGGCAGTACAGACACCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RAGVLSGQTRKGSKGQQSHASPF*AVQTPK Trigger: CTTTGGTGTCTGTACTGCTCAGAAGGGCGAGGCATG...ACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCTGACAATACCCCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTGCCTCAGGTGCCATCTaGCGCATGGGGCAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVASGAI*RMGQSF Trigger: GAAGCTTTGCCCCATGCGTCAGATGGCACCTGAGGC...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTTGTGTGAGAGCTCGGTaGATGTCACAGAGGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVCVRAR*MSQRPG Trigger: TCCCGGCCTCTGTGACATTCACCGAGCTCTCACACA...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAAGCGGTCTGTCCGTGTaGGAAGGTGGCATGTTATGC | + |
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Preference number: 4 (lower is better) Translates to: SFEGPPASLQGEVVWQWGSGLSV*EGGMLC Trigger: GCATAACATGCCACCTTCGCACACGGACAGACCGCT...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGGGTATTGTCAGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTGCAGAGTGTGAAGGATaGGCAACATTGGGGACATTC | + |
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Preference number: 4 (lower is better) Translates to: RAGVLSGQTRKGSKGQQSAECEG*ATLGTF Trigger: GAATGTCCCCAATGTTGCTCATCCTTCACACTCTGC...ACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCTGACAATACCCCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTGTAGCAGTGGCTGTGTaGGAGCTCGGTGAATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVVAVAV*ELGECH Trigger: GTGACATTCACCGAGCTCTCACACAGCCACTGCTAC...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTTTTGATGACGGATCCTaGAAGGCAGCCCACCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVFDDGS*KAAHPR Trigger: CCTAGGGTGGGCTGCCTTTCAGGATCCGTCATCAAA...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTACAGACAAATCTCTTTaGCCCAGGCCCCCAAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVTDKSL*PRPPSL Trigger: GAGACTTGGGGGCCTGGGTCAAAGAGATTTGTCTGT...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGATGGTTGAGTTTGAAGTaGGCACTGCCTGCTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SFEGPPASLQGEVVWQWGWLSLK*ALPAGR Trigger: TCTACCAGCAGGCAGTGCCCACTTCAAACTCAACCA...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGACAGGGAGAGGTTGTGTaGCAATGGGGAGGTGATAAT | + |
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Preference number: 4 (lower is better) Translates to: SFEGPPASLQGEVVWQWGQGEVV*QWGGDN Trigger: ATTATCACCTCCCCATTGCCACACAACCTCTCCCTG...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTAGTGTTTGTTCATCCTaGCCCGGAAATCCCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVSVCSS*PGNPLC Trigger: GCACAAGGGATTTCCGGGTCAGGATGAACAAACACT...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CCA 90 bp | TGCCATCTGACGCATGGGGCAAAGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAAGGATGAGCAACATTaGGGACATTCCAAAGCGAGA | + |
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Preference number: 4 (lower is better) Translates to: CHLTHGAKLRRTSCLSTGKDEQH*GHSKAR Trigger: TCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTT...CCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCTTTGCCCCATGCGTCAGATGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | AGGGCAGGGGTATTGTCAGGACAGACACGGAAGGGAAGCAAGGGCCAGCAGAGTCATAAGTCCGATTCCTaGGATCAAATGTCATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RAGVLSGQTRKGSKGQQSHKSDS*DQMSCL Trigger: GAGACATGACATTTGATCTCAGGAATCGGACTTATG...ACTCTGCTGGCCCTTGCTTCCCTTCCGTGTCTGTCCTGACAATACCCCTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTTTGGGGCAGGTTTCTTaGAATATGGCCATGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: QWLCESSVNVTEAGKILVLGQVS*NMAMPI Trigger: TATTGGCATGGCCATATTCCAAGAAACCTGCCCCAA...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR GCA 90 bp | AGCTTCGAAGGACCTCCTGCCTCTCTACAGGGAGAGGTTGTGTGGCAATGGGGAGGGAAGATCCTTGTTTaGTATCTCCTAATAACAGTG | + |
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Preference number: 4 (lower is better) Translates to: SFEGPPASLQGEVVWQWGGKILV*YLLITV Trigger: CACTGTTATTAGGAGATAGCAAACAAGGATCTTCCC...TCCCCATTGCCACACAACCTCTCCCTGTAGAGAGGCAGGAGGTCCTTCGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGAGAACCACTATTCTCTaGCTGAGGGAGAAGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: WALPAGRNNLVSVEKNLQRTTIL*LREKPS Trigger: GCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCT...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | AAGAAATCCATTGTTCAGAACCACTATTCTCTGACTGAGGGAGAAGCCAAGCTGATGTCACTGCCACAATaGGGCAGTAAAGGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: KKSIVQNHYSLTEGEAKLMSLPQ*GSKGGR Trigger: TCTTCCTCCTTTACTGCCTCATTGTGGCAGTGACAT...CAGCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCTGAACAATGGATTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGCTGACACACCATGTATaGTATCTGGAGAGTATTGCG | + |
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Preference number: 4 (lower is better) Translates to: WALPAGRNNLVSVEKNLQLTHHV*YLESIA Trigger: CGCAATACTCTCCAGATATCATACATGGTGTGTCAG...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR GCA 90 bp | AAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCTGGTAGAAATAACTTGAAATCCTTAAGAGCATaGATGCCTCGCCCTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KSQWLSLKWALPAGRNNLKSLRA*MPRPSE Trigger: CTCAGAAGGGCGAGGCATGCATGCTCTTAAGGATTT...CAAGTTATTTCTACCAGCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | TTTGTAAATGCCAAGAAAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCTGTTATGCACTGAAGTaGTGTCACTGCCACAATGAG | + |
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Preference number: 4 (lower is better) Translates to: FVNAKKITMVEFEVGTACCYALK*CHCHNE Trigger: CTCATTGTGGCAGTGACATCACTTCAGTGCATAACA...GCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTTTCTTGGCATTTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGTCTCTGCAGAATTTCTaGCACACCATGTATGATATC | + |
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Preference number: 4 (lower is better) Translates to: WALPAGRNNLVSVEKNLQSLQNF*HTMYDI Trigger: GATATCATACATGGTGTGTCAGAAATTCTGCAGAGA...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CCA 90 bp | TTTGTAAATGCCAAGAAAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCCTGTACAGGAACTCTTaGGGCAGGTTTCTTGGAATA | + |
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Preference number: 4 (lower is better) Translates to: FVNAKKITMVEFEVGTACLYRNS*GRFLGI Trigger: TATTCCAAGAAACCTGCCCCAAGAGTTCCTGTACAG...GCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTTTCTTGGCATTTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR CAA 72 bp | AGTTTGAAGTGGGCACTGCCTGCTGGTAGAAATAACTaGGTGTCCGTAGAGAAAAATCTTCAGTATCCATCA | + |
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Preference number: 4 (lower is better) Translates to: SLKWALPAGRNN*VSVEKNLQYPS Trigger: TGATGGATACTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCACTTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCAGTATCCATCATCCATTTAATTGCTATTTCTGCTTAGTCATTCTCCGGAGGGAGAAGCCAAGCTaGAGACACCAGAAAGGATCA | + |
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Preference number: 4 (lower is better) Translates to: IFSIHHPFNCYFCLVILRREKPS*RHQKGS Trigger: TGATCCTTTCTGGTGTCTTCAGCTTGGCTTCTCCCT...CCGGAGAATGACTAAGCAGAAATAGCAATTAAATGGATGATGGATACTGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR GCA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGATATCTGGAGAGTATTaGGCTGGTAAATCCTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: WALPAGRNNLVSVEKNLQISGEY*AGKSLR Trigger: TCTTAAGGATTTACCAGCGCAATACTCTCCAGATAT...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR GCA 90 bp | AAGAAATCCATTGTTCAGAACCACTATTCTCTGACTGAGGGAGAAGCCAAGCTGCAAATGTCATGTCTCTaGAGAATTTCTGACACACCA | + |
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Preference number: 4 (lower is better) Translates to: KKSIVQNHYSLTEGEAKLQMSCL*RISDTP Trigger: TGGTGTGTCAGAAATTCTGCAGAGACATGACATTTG...CAGCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCTGAACAATGGATTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCAGTATCCATCATCCATTTAATTGCTATTTCTGCTTAGTCATTCTCCGGTGGCATGTTATGCACTaGAGTGATGTCACTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: IFSIHHPFNCYFCLVILRWHVMH*SDVTAT Trigger: TGTGGCAGTGACATCACTTCAGTGCATAACATGCCA...CCGGAGAATGACTAAGCAGAAATAGCAATTAAATGGATGATGGATACTGAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| 3UTR CAA 72 bp | AATGTTCCTGCTTTAAATTTTACTGTACAGGAACTCTaGGGGCAGGTTTCTTGGAATATGGCCATGCCAATA | + |
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Preference number: 4 (lower is better) Translates to: NVPALNFTVQEL*GQVSWNMAMPI Trigger: TATTGGCATGGCCATATTCCAAGAAACCTGCCCCAAGAGTTCCTGTACAGTAAAATTTAAAGCAGGAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCAGTATCCATCATCCATTTAATTGCTATTTCTGCTTAGTCATTCTCCGGAGTTCTGATGTACCTTaGATGTACATCTCGATAGGA | + |
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Preference number: 4 (lower is better) Translates to: IFSIHHPFNCYFCLVILRSSDVP*MYISIG Trigger: TCCTATCGAGATGTACATTCAAGGTACATCAGAACT...CCGGAGAATGACTAAGCAGAAATAGCAATTAAATGGATGATGGATACTGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTGACAGACAAATCTCTTaGACCCAGGCCCCCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: QWLCESSVNVTEAGKILVDRQIS*TQAPKS Trigger: AGACTTGGGGGCCTGGGTCAAAGAGATTTGTCTGTC...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS GCA 90 bp | GAGCAGTACAGACACCAAAGCCTCTTCTACAGCGGTCTGTCCGTGTaGGAAGGTGGCATGTTATGCACTGAAGTGATGTCACTGCCACAA | + |
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Preference number: 5 (lower is better) Translates to: EQYRHQSLFYSGLSV*EGGMLCTEVMSLPQ Trigger: TTGTGGCAGTGACATCACTTCAGTGCATAACATGCCACCTTCGCACACGGACAGACCGCTGTAGAAGAGGCTTTGGTGTCTGTACTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS CCA 90 bp | CGGAAGGGAAGCAAGGGCCAGCAGAGTGTGAAGGATGAGCAACATTaGGGACATTCCAAAGCGAGACCTCAGGAGGGCAAATATCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: RKGSKGQQSVKDEQH*GHSKARPQEGKYLR Trigger: TCTAAGATATTTGCCCTCCTGAGGTCTCGCTTTGGAATGTCCCCAATGTTGCTCATCCTTCACACTCTGCTGGCCCTTGCTTCCCTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGGCGAGGGCAGGGGTATaGTCAGGACAGACACGGAAG | + |
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Preference number: 5 (lower is better) Translates to: WALPAGRNNLVSVEKNLQARAGV*SGQTRK Trigger: CTTCCGTGTCTGTCCTGACAATACCCCTGCCCTCGC...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGCTGTGTGAGAGCTCGGTGAATGTCACAGAGGCCGGGAAGATCCTTGTTACTGTACAGGAACTCTaGGGGCAGGTTTCTTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: QWLCESSVNVTEAGKILVTVQEL*GQVSWN Trigger: ATTCCAAGAAACCTGCCCCAAGAGTTCCTGTACAGT...AACAAGGATCTTCCCGGCCTCTGTGACATTCACCGAGCTCTCACACAGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS GCA 90 bp | TGTATGATATCTGGAGAGTATTGCGCTGGTAAATCCTTAAGAGCATaGATGCCTCGCCCTTCTGAGCAGTACAGACACCAAAGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: CMISGEYCAGKSLRA*MPRPSEQYRHQSLF Trigger: GAAGAGGCTTTGGTGTCTGTACTGCTCAGAAGGGCGAGGCATGCATGCTCTTAAGGATTTACCAGCGCAATACTCTCCAGATATCATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGCTTGGGGCAGGTTTCTaGGAATATGGCCATGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: WALPAGRNNLVSVEKNLQLGAGF*EYGHAN Trigger: ATTGGCATGGCCATATTCCAAGAAACCTGCCCCAAG...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | TGGGCACTGCCTGCTGGTAGAAATAACTTGGTGTCCGTAGAGAAAAATCTTCAGAGGAACAAGAAGTGTTaGTTCATCCTGACCCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: WALPAGRNNLVSVEKNLQRNKKC*FILTRK Trigger: TTTCCGGGTCAGGATGAACAAACACTTCTTGTTCCT...CTGAAGATTTTTCTCTACGGACACCAAGTTATTTCTACCAGCAGGCAGTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | AAGAAATCCATTGTTCAGAACCACTATTCTCTGACTGAGGGAGAAGCCAAGCTGCGGGAAGATCCTTGTTaGCTATCTCCTAATAACAGT | + |
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Preference number: 5 (lower is better) Translates to: KKSIVQNHYSLTEGEAKLREDPC*LSPNNS Trigger: ACTGTTATTAGGAGATAGCAAACAAGGATCTTCCCG...CAGCTTGGCTTCTCCCTCAGTCAGAGAATAGTGGTTCTGAACAATGGATTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS-3UTR CAA 90 bp | TTTGTAAATGCCAAGAAAATCACAATGGTTGAGTTTGAAGTGGGCACTGCCTGCGCTGGTAGAAATAACTaGGTGTCCGTAGAGAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: FVNAKKITMVEFEVGTACAGRNN*VSVEKN Trigger: ATTTTTCTCTACGGACACCAAGTTATTTCTACCAGC...GCAGGCAGTGCCCACTTCAAACTCAACCATTGTGATTTTCTTGGCATTTACAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS TCA 90 bp | TACAGTAATTGTAGTTGCAGCATGTATGAACATAAGTCCGATTCCTaGGATCAAATGTCATGTCTCTGCAGAATTTCTGACACACCATGT | + |
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Preference number: 5 (lower is better) Translates to: YSNCSCSMYEHKSDS*DQMSCLCRISDTPC Trigger: ACATGGTGTGTCAGAAATTCTGCAGAGACATGACATTTGATCTCAGGAATCGGACTTATGTTCATACATGCTGCAACTACAATTACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS GCA 72 bp | AGACACCAAAGCCTCTTCTACAGCGGTCTGTCCGTGTaGGAAGGTGGCATGTTATGCACTGAAGTGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: RHQSLFYSGLSV*EGGMLCTEVMS Trigger: TGACATCACTTCAGTGCATAACATGCCACCTTCGCACACGGACAGACCGCTGTAGAAGAGGCTTTGGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS GCA 72 bp | TCTGGAGAGTATTGCGCTGGTAAATCCTTAAGAGCATaGATGCCTCGCCCTTCTGAGCAGTACAGACACCAA | + |
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Preference number: 6 (lower is better) Translates to: SGEYCAGKSLRA*MPRPSEQYRHQ Trigger: TTGGTGTCTGTACTGCTCAGAAGGGCGAGGCATGCATGCTCTTAAGGATTTACCAGCGCAATACTCTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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| CDS TCA 72 bp | TGTAGTTGCAGCATGTATGAACATAAGTCCGATTCCTaGGATCAAATGTCATGTCTCTGCAGAATTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: CSCSMYEHKSDS*DQMSCLCRISD Trigger: GTCAGAAATTCTGCAGAGACATGACATTTGATCTCAGGAATCGGACTTATGTTCATACATGCTGCAACTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445202.2 |
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