Pregenerated sensors for PATE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000171053Ensembl transcript IDs: ENST00000305738.10, ENST00000437148.2, ENST00000525969.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTGGGAGAGGCATCTGGGGTCATGGGGCATCTCTTCACACAAGTaGCTGATGAGATGTCTAGTGGCCAGACTCAAATGGCTTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GWERHLGSWGISSHK*LMRCLVARLKWLPQ Trigger: CTGAGGAAGCCATTTGAGTCTGGCCACTAGACATCTCATCAGCCACTTGTGTGAAGAGATGCCCCATGACCCCAGATGCCTCTCCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR TCA 90 bp | TTCTCCAGGATGTTAGAATTATACAGAGTGGCAAGCTCAAGTGTGTaGGATGGAGGTAAGGGTGGGAGAGGCATCTGGGGTCATGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: FSRMLELYRVASSSV*DGGKGGRGIWGHGA Trigger: TGCCCCATGACCCCAGATGCCTCTCCCACCCTTACCTCCATCTCACACACTTGAGCTTGCCACTCTGTATAATTCTAACATCCTGGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR GCA 90 bp | GACTCAAATGGCTTCCTCAGACCCCACATTTCTCAGCTTCCTCTATaGCATGCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: DSNGFLRPHISQLPL*HAPGMGIFVLLLVA Trigger: AGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTCTGAGGAAGCCATTTGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 90 bp | TCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCTCTGTCTCCTaGAAGTATCCTGAAGCTGTTCCCTGTCTAGAGGTTGATGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: SRHGNICFAAGGSVS*KYPEAVPCLEVDVS Trigger: GGAGACATCAACCTCTAGACAGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 90 bp | TCAGACCCCACATTTCTCAGCTTCCTCTATGCCATGCTCCAGGCATaGGAATATTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: SDPTFLSFLYAMLQA*EYLFCCWWLCLLEV Trigger: TACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 90 bp | TCTTCACACAAGTGGCTGATGAGATGTCTAGTGGCCAGACTCAAATaGCTTCCTCAGACCCCACATTTCTCAGCTTCCTCTATGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: SSHKWLMRCLVARLK*LPQTPHFSASSMPC Trigger: GCATGGCATAGAGGAAGCTGAGAAATGTGGGGTCTGAGGAAGCCATTTGAGTCTGGCCACTAGACATCTCATCAGCCACTTGTGTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR GCA 90 bp | GGCGTGACAGAGACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTaGAGAAGATGGAGCCATGTGTTTGCAATCCTCTTCTGTAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: GVTETVEKERDFPFV*RRWSHVFAILFCSV Trigger: CACACTACAGAAGAGGATTGCAAACACATGGCTCCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGTCTCTGTCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR GCA 90 bp | TTCATGAACAAACTCCAAGAAGACTTGAGCCACTTCTTTTTATGTTaGTACTCCCCATCCCTTCAGGCCACAGTTATGTGCTTTCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: FMNKLQEDLSHFFLC*YSPSLQATVMCFLW Trigger: CCAAAGAAAGCACATAACTGTGGCCTGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTTTGTTCATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR TCA 90 bp | AGGCTTCATTCTACAAGTTTCGTTAGAAATCAGCCTCTACCCTTGTaGACAGGTTCGGTCAAACTGCCATTTTTCTCCAGGATGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: RLHSTSFVRNQPLPL*TGSVKLPFFSRMLE Trigger: TTCTAACATCCTGGAGAAAAATGGCAGTTTGACCGAACCTGTTCACAAGGGTAGAGGCTGATTTCTAACGAAACTTGTAGAATGAAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTTCCTCAGACCCCACATTTCTCAGCTTCCTCTATGCCATGCTCCAGGCACCTTTCCTCCTTTTCTaGATGAACTGGCTATACAGT | + |
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Preference number: 2 (lower is better) Translates to: MASSDPTFLSFLYAMLQAPFLLF*MNWLYS Trigger: ACTGTATAGCCAGTTCATTCAGAAAAGGAGGAAAGG...TGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTCTGAGGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTATCCTGAAGCTGTTCCCTCAGGCCACAGTTATGTaGTTTCTTTGGAGTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: FVLLLVALSPGSILKLFPQATVM*FLWSGI Trigger: TATCCCACTCCAAAGAAAGCACATAACTGTGGCCTG...AGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR GCA 90 bp | GACCCCACATTTCTCAGCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGCACTTCTTTTTATGTTaGTACTCCCCATCCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: DPTFLSFLYAMLQAWEYLHFFLC*YSPSLQ Trigger: CTGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTG...CAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CCA 90 bp | GTGACAGAGACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGATGGACCTCACCCAGAAATTaGAGTCACAGAAGAACCATT | + |
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Preference number: 2 (lower is better) Translates to: VTETVEKERDFPFVCRRWTSPRN*SHRRTI Trigger: AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGT...CCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGTCTCTGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAACAGGTTCGGTCAAACTGCCATTTTTCTCCAGGATGTTAGAATTATACAGGTGGCCAGACTCAAATaGCTTCCTCAGACCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: VNRFGQTAIFLQDVRIIQVARLK*LPQTPH Trigger: ATGTGGGGTCTGAGGAAGCCATTTGAGTCTGGCCAC...CTGTATAATTCTAACATCCTGGAGAAAAATGGCAGTTTGACCGAACCTGTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGGGAAGCTGGATGCAGGTACTATTTCTAGAATCCCATAGACTTCTCCTGAACTCCAAGAAGACTTaGGCCACTTCTTTTTATGTT | + |
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Preference number: 2 (lower is better) Translates to: WQGSWMQVLFLESHRLLLNSKKT*ATSFYV Trigger: AACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTT...CAGGAGAAGTCTATGGGATTCTAGAAATAGTACCTGCATCCAGCTTCCCTGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CAA 90 bp | ATTCATGAACAAACTCCAAGAAGACTTGAGCCACTTCTTTTTATGTaGCTACTCCCCATCCCTTCAGGCCACAGTTATGTGCTTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: IHEQTPRRLEPLLFM*LLPIPSGHSYVLSL Trigger: CAAAGAAAGCACATAACTGTGGCCTGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTTTGTTCATGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR TCA 90 bp | GATCTGATTCTAGAAGGCAGACAATCTTTCTCTGTTCATGTTTCTGATGCAGTTTCCTCCTTTTCTGAATaGACTGGCTATACAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: DLILEGRQSFSVHVSDAVSSFSE*TGYTVK Trigger: TTTCACTGTATAGCCAGTTCATTCAGAAAAGGAGGA...AACTGCATCAGAAACATGAACAGAGAAAGATTGTCTGCCTTCTAGAATCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CCA 90 bp | GATCTGATTCTAGAAGGCAGACAATCTTTCTCTGTTCATGTTTCTGATGCAGTTGTTATGTGCTTTCTTTaGAGTGGGATAAGAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: DLILEGRQSFSVHVSDAVVMCFL*SGIRRI Trigger: TATCCTTCTTATCCCACTCCAAAGAAAGCACATAAC...AACTGCATCAGAAACATGAACAGAGAAAGATTGTCTGCCTTCTAGAATCAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 72 bp | AGGCATCTGGGGTCATGGGGCATCTCTTCACACAAGTaGCTGATGAGATGTCTAGTGGCCAGACTCAAATGG | + |
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Preference number: 3 (lower is better) Translates to: RHLGSWGISSHK*LMRCLVARLKW Trigger: CCATTTGAGTCTGGCCACTAGACATCTCATCAGCCACTTGTGTGAAGAGATGCCCCATGACCCCAGATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTGATGGAGCCATGTGTTaGCAATCCTCTTCTGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: APGMGIFVLLLVALSPGSDGAMC*QSSSVV Trigger: CACTACAGAAGAGGATTGCAAACACATGGCTCCATC...ACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 72 bp | AAGTGGCTGATGAGATGTCTAGTGGCCAGACTCAAATaGCTTCCTCAGACCCCACATTTCTCAGCTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: KWLMRCLVARLK*LPQTPHFSASS Trigger: AGAGGAAGCTGAGAAATGTGGGGTCTGAGGAAGCCATTTGAGTCTGGCCACTAGACATCTCATCAGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR TCA 72 bp | GAAGCTGTTCCCTGTCTAGAGGTTGATGTCTCCTTGTaGGTTTGGCAGGGAAGCTGGATGCAGGTACTATTT | + |
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Preference number: 3 (lower is better) Translates to: EAVPCLEVDVSL*VWQGSWMQVLF Trigger: AAATAGTACCTGCATCCAGCTTCCCTGCCAAACTCACAAGGAGACATCAACCTCTAGACAGGGAACAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 72 bp | GGGAATATTTGTTTTGCTGCTGGTGGCTCTGTCTCCTaGAAGTATCCTGAAGCTGTTCCCTGTCTAGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: GNICFAAGGSVS*KYPEAVPCLEV Trigger: AACCTCTAGACAGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGATGCAGTTTCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCAAACCTCACCCAGAAATaGGAGTCACAGAAGAACCAT | + |
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Preference number: 3 (lower is better) Translates to: SDAVSFLCPNLLLTLGSANLTQK*ESQKNH Trigger: ATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTT...TGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGAAACTGCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR-3UTR CAA 90 bp | TCTGATGCAGTTTCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCACCACTTCTTTTTATGTaGCTACTCCCCATCCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: SDAVSFLCPNLLLTLGSAPLLFM*LLPIPS Trigger: TGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTGG...TGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGAAACTGCATCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR GCA 72 bp | TGTTGCTACTCCCCATCCCTTCAGGCCACAGTTATGTaGTTTCTTTGGAGTGGGATAAGAAGGATAACACAG | + |
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Preference number: 3 (lower is better) Translates to: CCYSPSLQATVM*FLWSGIRRITQ Trigger: CTGTGTTATCCTTCTTATCCCACTCCAAAGAAAGCACATAACTGTGGCCTGAAGGGATGGGGAGTAGCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CCA 72 bp | GAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGATaGAGCCATGTGTTTGCAATCCTCTTCTGTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: EKERDFPFVCRR*SHVFAILFCSV Trigger: CACACTACAGAAGAGGATTGCAAACACATGGCTCCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR TCA 72 bp | TCTACAAGTTTCGTTAGAAATCAGCCTCTACCCTTGTaGACAGGTTCGGTCAAACTGCCATTTTTCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: STSFVRNQPLPL*TGSVKLPFFSR Trigger: CCTGGAGAAAAATGGCAGTTTGACCGAACCTGTTCACAAGGGTAGAGGCTGATTTCTAACGAAACTTGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR CCA 90 bp | GGGCGTGACAGAGACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGAGCAGCAGAGCAGGATaGGGAGTTCCAGCAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRDRDCRKGEGLSFRVQKSSRAG*GVPARG Trigger: CCCTCTTGCTGGAACTCCCCATCCTGCTCTGCTGCT...CTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGTCTCTGTCACGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR TCA 90 bp | GCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCGGCTCCTGCAGCACCTaGAGTTCACCAAATAGACAC | + |
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Preference number: 4 (lower is better) Translates to: ASSMPCSRHGNICFAAGGGSCST*SSPNRH Trigger: GTGTCTATTTGGTGAACTTCAGGTGCTGCAGGAGCC...GCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR CCA 90 bp | GAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAGCAGCAGAGCAGGATaGGGAGTTCCAGCAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: EEAEATTSPRNWSHRRTISSRAG*GVPARG Trigger: CCCTCTTGCTGGAACTCCCCATCCTGCTCTGCTGCT...AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
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| CDS-3UTR TCA 90 bp | TTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTATCCTGAAGCTGTTCCCTGTTGATGTCTCCTTGTaGGTTTGGCAGGGAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FVLLLVALSPGSILKLFPVDVSL*VWQGSW Trigger: CCAGCTTCCCTGCCAAACTCACAAGGAGACATCAAC...AGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR TCA 90 bp | GAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTGCAAGCTCAAGTGTGTaGGATGGAGGTAAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EEAEATTSPRNWSHRRTIASSSV*DGGKGG Trigger: CCCACCCTTACCTCCATCTCACACACTTGAGCTTGC...AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR TCA 90 bp | TTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTATCCTGAAGCTGTTCCCTCAGCCTCTACCCTTGTaGACAGGTTCGGTCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: FVLLLVALSPGSILKLFPQPLPL*TGSVKL Trigger: CAGTTTGACCGAACCTGTTCACAAGGGTAGAGGCTG...AGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR CCA 90 bp | GAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACGGAGCACTTTTCTCCTaGGAACTGGAGGTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: ESHCEEAEATTSPRNWSHGALFS*ELEVAH Trigger: ATGTGCCACCTCCAGTTCCCAGGAGAAAAGTGCTCC...GTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
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| CDS-3UTR CCA 90 bp | AGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAGGAGCACTTTTCTCCTaGGAACTGGAGGTGGCACAT | + |
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Preference number: 4 (lower is better) Translates to: SHCEEAEATTSPRNWSHRGALFS*ELEVAH Trigger: ATGTGCCACCTCCAGTTCCCAGGAGAAAAGTGCTCC...TCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
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| CDS-3UTR CCA 90 bp | GTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAATCATTGCACAGGTCATaGCTCCTGCAGCACCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VIVKRLRQQPHPEIGVTESLHRS*LLQHLK Trigger: CTTCAGGTGCTGCAGGAGCCATGACCTGTGCAATGA...TTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
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| CDS-3UTR CCA 90 bp | GTGACAGAGACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGATGGGTGGCCAGACTCAAATaGCTTCCTCAGACCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VTETVEKERDFPFVCRRWVARLK*LPQTPH Trigger: ATGTGGGGTCTGAGGAAGCCATTTGAGTCTGGCCAC...CCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGTCTCTGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| 3UTR CAA 72 bp | AGCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTaGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SFLYAMLQAWEY*FCCWWLCLLEV Trigger: TACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR TCA 90 bp | TCTGATGCAGTTTCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCACTCCTGGAAGTATCCTaGAGCTGTTCCCTGTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: SDAVSFLCPNLLLTLGSALLEVS*SCSLSR Trigger: TCTAGACAGGGAACAGCTTCAGGATACTTCCAGGAG...TGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGAAACTGCATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR CCA 90 bp | GCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTTTCGTGTGCAGAAGATaGAGCCATGTGTTTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: APGMGIFVLLLVALSPGSFVCRR*SHVFAI Trigger: GATTGCAAACACATGGCTCCATCTTCTGCACACGAA...ACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR TCA 90 bp | TGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCGATTACCATCCCTTTTaGACATCCTTCCAACCATGC | + |
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Preference number: 4 (lower is better) Translates to: CEEAEATTSPRNWSHRRTDYHPF*TSFQPC Trigger: GCATGGTTGGAAGGATGTTCAAAAGGGATGGTAATC...GGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGAAGCTGGATGCAGGTACTATTTCTAGAATCCCATAGACTTCTCCTGGGCCTCTTCTGTTGTTaGTGTGCATATTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WQGSWMQVLFLESHRLLLGLFCC*CAYSSS Trigger: GGAAGAGGAATATGCACAGCAACAACAGAAGAGGCC...CAGGAGAAGTCTATGGGATTCTAGAAATAGTACCTGCATCCAGCTTCCCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR GCA 90 bp | TCTGATGCAGTTTCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCAACATCCTTCCAACCATaGAGGCCTCTTCTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SDAVSFLCPNLLLTLGSATSFQP*RPLLLL Trigger: CAACAACAGAAGAGGCCTGCATGGTTGGAAGGATGT...TGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGAAACTGCATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGAAGCTGGATGCAGGTACTATTTCTAGAATCCCATAGACTTCTCCTGTCTAAAGGTCTTCATTaGACAGGTCATGGCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: WQGSWMQVLFLESHRLLLSKGLH*TGHGSC Trigger: GCAGGAGCCATGACCTGTGCAATGAAGACCTTTAGA...CAGGAGAAGTCTATGGGATTCTAGAAATAGTACCTGCATCCAGCTTCCCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR GCA 90 bp | GTGACAGAGACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGATGGCCCATAGACTTCTCCTaGTTTTATTCTCCAACCCCC | + |
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Preference number: 4 (lower is better) Translates to: VTETVEKERDFPFVCRRWPIDFS*FYSPTP Trigger: GGGGGTTGGAGAATAAAAGCAGGAGAAGTCTATGGG...CCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGTCTCTGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR GCA 90 bp | TTTGTTTTGCTGCTGGTGGCTCTGTCTCCTGGAAGTATCCTGAAGCTGTTCCCTTGGGAATATTTGTTTTaGTGCTGGTGGCTCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVLLLVALSPGSILKLFPWEYLF*CWWLCL Trigger: GAGACAGAGCCACCAGCAGCAAAACAAATATTCCCA...AGGGAACAGCTTCAGGATACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
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| CDS-3UTR GCA 90 bp | GACCCCACATTTCTCAGCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGCAGGTTCGGTCAAACTaGCATTTTTCTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DPTFLSFLYAMLQAWEYLQVRSN*HFSPGC Trigger: ACATCCTGGAGAAAAATGGCAGTTTGACCGAACCTG...CAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTTTGTTTTGCTGCTGGTaGCTCTGTCTCCTGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EEAEATTSPRNWSHRRTILFCCW*LCLLEV Trigger: TACTTCCAGGAGACAGAGCCACCAGCAGCAAAACAA...AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTTCTTTAGGCAGCCCATaGAGGTTAACCAGGGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTSLGSP*RLTRDY Trigger: GTAATCCCTGGTTAACCTTCATGGGCTGCCTAAAGA...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGGGCTCCTGCAGCACCTaGAGTTCACCAAATAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: FLESHCEEAEATTSPRNWGSCST*SSPNRH Trigger: GTGTCTATTTGGTGAACTTCAGGTGCTGCAGGAGCC...CCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACCTTCTGTTGTTGCTGTaGATATTCCTCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESHCEEAEATTSPRNWSHLLLLL*IFLFLW Trigger: CCAGAGGAAGAGGAATATGCACAGCAACAACAGAAG...GTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTGGCCTCTTCTGTTGTTaGTGTGCATATTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTGLFCC*CAYSSS Trigger: GGAAGAGGAATATGCACAGCAACAACAGAAGAGGCC...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTTCTAAAGGTCTTCATTaGACAGGTCATGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTSKGLH*TGHGSC Trigger: GCAGGAGCCATGACCTGTGCAATGAAGACCTTTAGA...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTCAGGCCACAGTTATGTaGTTTCTTTGGAGTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: EEAEATTSPRNWSHRRTIQATVM*FLWSGI Trigger: TATCCCACTCCAAAGAAAGCACATAACTGTGGCCTG...AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCAACCTCACCCAGAAATTaGAGTCACAGAAGAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: VKRLRQQPHPEIGVTEEPTSPRN*SHRRTI Trigger: AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGT...TGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTGCCATGCTCCAGGCATaGGAATATTTGTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTAMLQA*EYLFCC Trigger: GCAGCAAAACAAATATTCCCATGCCTGGAGCATGGC...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | TGGCAGGGAAGCTGGATGCAGGTACTATTTCTAGAATCCCATAGACTTCTCCTGTGGCACATCCTACACTaGACAATTTCTATCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQGSWMQVLFLESHRLLLWHILH*TISITG Trigger: TCCTGTGATAGAAATTGTTCAGTGTAGGATGTGCCA...CAGGAGAAGTCTATGGGATTCTAGAAATAGTACCTGCATCCAGCTTCCCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTGATTACCATCCCTTTTaGACATCCTTCCAACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTDYHPF*TSFQPC Trigger: GCATGGTTGGAAGGATGTTCAAAAGGGATGGTAATC...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR TCA 90 bp | TCTGATGCAGTTTCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCACCTTTCCTCCTTTTCTaGATGAACTGGCTATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDAVSFLCPNLLLTLGSAPFLLF*MNWLYS Trigger: ACTGTATAGCCAGTTCATTCAGAAAAGGAGGAAAGG...TGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGAAACTGCATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTGGCACATCCTACACTaGACAATTTCTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAEATTSPRNWSHRRTINWHILH*TISITA Trigger: TGCAGTGATAGAAATTGTTCAGTGTAGGATGTGCCA...GTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACCACTTCTTTTTATGTTaGTACTCCCCATCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESHCEEAEATTSPRNWSHHFFLC*YSPSLQ Trigger: CTGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTG...GTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACACCTCACCCAGAAATTaGAGTCACAGAAGAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: EAEATTSPRNWSHRRTINTSPRN*SHRRTI Trigger: AATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGT...GTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR TCA 90 bp | GTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAATCCTCCTTTTCTGAATaGACTGGCTATACAGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VIVKRLRQQPHPEIGVTESSFSE*TGYTVK Trigger: TTTCACTGTATAGCCAGTTCATTCAGAAAAGGAGGA...TTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | TGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCAACTCCAAGAAGACTTaGGCCACTTCTTTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: CEEAEATTSPRNWSHRRTNSKKT*ATSFYV Trigger: AACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTT...GGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTAGAAAAGGAGAGGGACTTTCCTTTCGTGTGCAGAAGATGGAGCCATGTGCTCTGTTCATGTTTCTaGTGCAGTTTCCTTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TVEKERDFPFVCRRWSHVLCSCF*CSFLSM Trigger: CATAGAAAGGAAACTGCATCAGAAACATGAACAGAG...CACATGGCTCCATCTTCTGCACACGAAAGGAAAGTCCCTCTCCTTTTCTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTATGTCCCAATCTTCTCCTCACCCTGGGATCAGCATTCATGAACAAACTTCTGTTGTTGCTGTaGATATTCCTCTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLCPNLLLTLGSAFMNKLLLLL*IFLFLW Trigger: CCAGAGGAAGAGGAATATGCACAGCAACAACAGAAG...TTTGTTCATGAATGCTGATCCCAGGGTGAGGAGAAGATTGGGACATAGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTAGACACTCCACCTTATaGCTTTCACATCAGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LESHCEEAEATTSPRNWSRHSTL*LSHQHS Trigger: ACTGTGCTGATGTGAAAGGCATAAGGTGGAGTGTCT...ACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR GCA 90 bp | TGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCTATATTAAAATACCCTaGCACAGAAGGAAGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CEEAEATTSPRNWSHRRTYIKIP*HRRKES Trigger: GCTTTCCTTCCTTCTGTGGCAGGGTATTTTAATATA...GGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| 3UTR CAA 72 bp | CTGGGATCAGCATTCATGAACAAACTCCAAGAAGACTaGAGCCACTTCTTTTTATGTTGCTACTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSAFMNKLQED*SHFFLCCYSPS Trigger: GGATGGGGAGTAGCAACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTTTGTTCATGAATGCTGATCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGACACTCCACCTTATaGCTTTCACATCAGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLESHCEEAEATTSPRNWRHSTL*LSHQHS Trigger: ACTGTGCTGATGTGAAAGGCATAAGGTGGAGTGTCT...CCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTGTTATGTGCTTTCTTTaGAGTGGGATAAGAAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LESHCEEAEATTSPRNWSVMCFL*SGIRRI Trigger: TATCCTTCTTATCCCACTCCAAAGAAAGCACATAAC...ACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CCA 90 bp | ACAGATCTGATTCTAGAAGGCAGACAATCTTTCTCTGTTCATGTTTCTGATGCATATTTGTTTTGCTGCTaGTGGCTCTGTCTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TDLILEGRQSFSVHVSDAYLFCC*WLCLLE Trigger: TTCCAGGAGACAGAGCCACCAGCAGCAAAACAAATA...TGCATCAGAAACATGAACAGAGAAAGATTGTCTGCCTTCTAGAATCAGATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR TCA 90 bp | GTGAACAGGTTCGGTCAAACTGCCATTTTTCTCCAGGATGTTAGAATTATACAGCAGCAACTATTTCATTaGCTGCATCATTTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VNRFGQTAIFLQDVRIIQQQLFH*LHHFSL Trigger: CAATGAGAAATGATGCAGTCAATGAAATAGTTGCTG...CTGTATAATTCTAACATCCTGGAGAAAAATGGCAGTTTGACCGAACCTGTTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATGTCTCCTTGTGAGTTaGGCAGGGAAGCTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: VKRLRQQPHPEIGVTEEPCLLVS*AGKLDA Trigger: TGCATCCAGCTTCCCTGCCAAACTCACAAGGAGACA...TGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCAGGCCTCTTCTGTTGTaGCTGTGCATATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CEEAEATTSPRNWSHRRTRPLLL*LCIFLF Trigger: GAAGAGGAATATGCACAGCAACAACAGAAGAGGCCT...GGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCGGATTACCATCCCTTTaGAACATCCTTCCAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASSMPCSRHGNICFAAGGGLPSL*NILPTM Trigger: CATGGTTGGAAGGATGTTCAAAAGGGATGGTAATCC...GCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | GACCCCACATTTCTCAGCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGCCACTTCTTTTTATGTaGCTACTCCCCATCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DPTFLSFLYAMLQAWEYLPLLFM*LLPIPS Trigger: TGAAGGGATGGGGAGTAGCAACATAAAAAGAAGTGG...CAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATGGGAATATTTGTTTaGCTGCTGGTGGCTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CEEAEATTSPRNWSHRRTMGIFV*LLVALS Trigger: AGACAGAGCCACCAGCAGCAAAACAAATATTCCCAT...GGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS TCA 90 bp | ACTTCTAAAGGTCTTCATTGCACAGGTCATGGCTCCTGCAGCACCTaGAGTTCACCAAATAGACACTCCACCTTATGCCTTTCACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSKGLHCTGHGSCST*SSPNRHSTLCLSHQ Trigger: CTGATGTGAAAGGCATAAGGTGGAGTGTCTATTTGGTGAACTTCAGGTGCTGCAGGAGCCATGACCTGTGCAATGAAGACCTTTAGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS TCA 90 bp | ATTAGAACAGAAGCTCATCATGCTTCAGTTGCCATAGGACTCCCATaGGAAGGCCTCTGTCATGGGTGCTCTCACCTGTTCCTAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRTEAHHASVAIGLP*EGLCHGCSHLFLNS Trigger: TGAATTTAGGAACAGGTGAGAGCACCCATGACAGAGGCCTTCTCATGGGAGTCCTATGGCAACTGAAGCATGATGAGCTTCTGTTCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525969.1 |
||
| CDS-3UTR CAA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTAGGCCTCTTCTGTTGTaGCTGTGCATATTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTRPLLL*LCIFLF Trigger: GAAGAGGAATATGCACAGCAACAACAGAAGAGGCCT...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CAA 90 bp | GTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAAACCTCACCCAGAAATaGGAGTCACAGAAGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIVKRLRQQPHPEIGVTENLTQK*ESQKNH Trigger: ATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTT...TTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAGAAGAACCATTAACTGATGGAGCCATGTGTTaGCAATCCTCTTCTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLRQQPHPEIGVTEEPLTDGAMC*QSSSVV Trigger: CACTACAGAAGAGGATTGCAAACACATGGCTCCATC...AGTTAATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS TCA 90 bp | CCCATAAAGGAAGGGAGAAGAGCTTTAGTTAAGGTCCTGGGGACATaGCATACCCCTGGTAGAAGGCATAACATTAGAACAGAAGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PIKEGRRALVKVLGT*HTPGRRHNIRTEAH Trigger: ATGAGCTTCTGTTCTAATGTTATGCCTTCTACCAGGGGTATGTCATGTCCCCAGGACCTTAACTAAAGCTCTTCTCCCTTCCTTTATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525969.1 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTCTATGCCATGCTCCAGGCATGGGAATATTTGTTTTGCTGCTGGTGGCAACCTGCAGGATATATaGATCTTGTTCTTTCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSMPCSRHGNICFAAGGNLQDI*ILFFLS Trigger: TGAGAGAAAGAACAAGATCAATATATCCTGCAGGTT...GCCACCAGCAGCAAAACAAATATTCCCATGCCTGGAGCATGGCATAGAGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | GAAAGCACAAGGGTTTGTAGCAACCTGCAGGATATATTGATCTTGTTCTTTCTCTCCAGCAAGAGGGACTaGTCCATTTTGGAAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESTRVCSNLQDILILFFLSSKRD*SILERG Trigger: CCCTCTTTCCAAAATGGACAAGTCCCTCTTGCTGGA...GAGAAAGAACAAGATCAATATATCCTGCAGGTTGCTACAAACCCTTGTGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTGGATTACCATCCCTTTaGAACATCCTTCCAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LESHCEEAEATTSPRNWSGLPSL*NILPTM Trigger: CATGGTTGGAAGGATGTTCAAAAGGGATGGTAATCC...ACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTAACCTCACCCAGAAATaGGAGTCACAGAAGAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: LESHCEEAEATTSPRNWSNLTQK*ESQKNH Trigger: ATGGTTCTTCTGTGACTCCAATTTCTGGGTGAGGTT...ACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305738.10 ENST00000437148.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGTCATTGTGAAGAGGCTGAGGCAACAACCTCACCCAGAAATTGGAGTCACAAACTCCAAGAAGACTaGAGCCACTTCTTTTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: ESHCEEAEATTSPRNWSHKLQED*SHFFLC Trigger: ACATAAAAAGAAGTGGCTCAAGTCTTCTTGGAGTTT...GTGACTCCAATTTCTGGGTGAGGTTGTTGCCTCAGCCTCTTCACAATGACTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS-3UTR CAA 90 bp | GAAAGCACAAGGGTTTGTAGCAACCTGCAGGATATATTGATCTTGTTCTTTCTCAGTTATGTGCTTTCTTaGGAGTGGGATAAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESTRVCSNLQDILILFFLSYVLS*EWDKKD Trigger: ATCCTTCTTATCCCACTCCAAAGAAAGCACATAACT...GAGAAAGAACAAGATCAATATATCCTGCAGGTTGCTACAAACCCTTGTGCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305738.10 |
||
| CDS TCA 72 bp | GAAGCTCATCATGCTTCAGTTGCCATAGGACTCCCATaGGAAGGCCTCTGTCATGGGTGCTCTCACCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAHHASVAIGLP*EGLCHGCSHLF Trigger: GAACAGGTGAGAGCACCCATGACAGAGGCCTTCTCATGGGAGTCCTATGGCAACTGAAGCATGATGAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525969.1 |
||
| CDS GCA 72 bp | TTTTGGGTTAGAAGTCTGCCTAGAGCCACAGGGCTTTaGCAGAGCCCATCAAGCGTGAACCTCTTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: FWVRSLPRATGL*QSPSSVNLFLC Trigger: ACAGAGGAAGAGGTTCACGCTTGATGGGCTCTGGCAAAGCCCTGTGGCTCTAGGCAGACTTCTAACCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525969.1 |
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| CDS CAA 90 bp | TACGTCCTCTGCCCGTTCTTCTTTTCCCCAACCCACAACTTACTTTaGAACATCCTTCCAACCATGCAGGCCTCTTCTGTTGTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: YVLCPFFFSPTHNLL*NILPTMQASSVVAV Trigger: CACAGCAACAACAGAAGAGGCCTGCATGGTTGGAAGGATGTTCAAAAGTAAGTTGTGGGTTGGGGAAAAGAAGAACGGGCAGAGGACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525969.1 |
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| CDS TCA 72 bp | TTTTCTCCTGGGAACTGGAGGTGGCACATCCTACACTaGACAATTTCTATCACTTGGCCAGAGAGAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: FSPGNWRWHILH*TISITWPERGE Trigger: TTCCCCTCTCTCTGGCCAAGTGATAGAAATTGTTCAGTGTAGGATGTGCCACCTCCAGTTCCCAGGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525969.1 |
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| CDS CAA 72 bp | TGCCCGTTCTTCTTTTCCCCAACCCACAACTTACTTTaGAACATCCTTCCAACCATGCAGGCCTCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: CPFFFSPTHNLL*NILPTMQASSV Trigger: AACAGAAGAGGCCTGCATGGTTGGAAGGATGTTCAAAAGTAAGTTGTGGGTTGGGGAAAAGAAGAACGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525969.1 |
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| CDS TCA 72 bp | GAAGGGAGAAGAGCTTTAGTTAAGGTCCTGGGGACATaGCATACCCCTGGTAGAAGGCATAACATTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: EGRRALVKVLGT*HTPGRRHNIRT Trigger: TGTTCTAATGTTATGCCTTCTACCAGGGGTATGTCATGTCCCCAGGACCTTAACTAAAGCTCTTCTCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525969.1 |
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