RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARVA (Homo sapiens)

Ensembl gene IDs: ENSG00000197702

Ensembl transcript IDs: ENST00000334956.15, ENST00000526746.5, ENST00000528916.1, ENST00000530755.5, ENST00000533345.5, ENST00000533392.1

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCTGGGGAGCCAGGTCTTCTTGTCTGGGGATCCTCCTCCGTGGTaGGCCCTGGAGTGGCAGGCTTCTCATTGGAGTAGCTCCACGACT +
Preference number: 1 (lower is better)
Translates to: PLGSQVFLSGDPPPW*ALEWQASHWSSSTT
Trigger: AGTCGTGGAGCTACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCCCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp ACTCCTCTGGGGAGCCAGGTCTTCTTGTCTGGGGATCCTCCTCCGTaGTGCGCCCTGGAGTGGCAGGCTTCTCATTGGAGTAGCTCCACG +
Preference number: 1 (lower is better)
Translates to: TPLGSQVFLSGDPPP*CALEWQASHWSSST
Trigger: CGTGGAGCTACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCCCCAGAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp GGAGCCAGGTCTTCTTGTCTGGGGATCCTCCTCCGTGGTGCGCCCTaGAGTGGCAGGCTTCTCATTGGAGTAGCTCCACGACTGAGGGAT +
Preference number: 1 (lower is better)
Translates to: GARSSCLGILLRGAP*SGRLLIGVAPRLRD
Trigger: ATCCCTCAGTCGTGGAGCTACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp GAGGAGCTATGGGATGCCCAGAGGTTGCTAAGACCAGATTGGTGTTaGGGTGGGCAGAGGTCTGATCTCCTCTCCTGGTCTCCTCCGCTC +
Preference number: 1 (lower is better)
Translates to: EELWDAQRLLRPDWC*GGQRSDLLSWSPPL
Trigger: GAGCGGAGGAGACCAGGAGAGGAGATCAGACCTCTGCCCACCCCAACACCAATCTGGTCTTAGCAACCTCTGGGCATCCCATAGCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp CGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATGGATCAGCGTTCTaGCCTGGTAGGCCCCTTATTTCATTCCCTCCACACATGCAGCCT +
Preference number: 1 (lower is better)
Translates to: RGERAGSTGLHGSAF*PGRPLISFPPHMQP
Trigger: AGGCTGCATGTGTGGAGGGAATGAAATAAGGGGCCTACCAGGCCAGAACGCTGATCCATGGAGACCAGTGCTTCCAGCCCTCTCACCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp CAAGGGTCCCTGTTGAAGAGCCCTACTTCCAAAGTGATGCTCACATaGGCCCGTGCCCAGCTCTCTGCGGTGCCTGAGCATATTGTACAT +
Preference number: 1 (lower is better)
Translates to: QGSLLKSPTSKVMLT*ARAQLSAVPEHIVH
Trigger: ATGTACAATATGCTCAGGCACCGCAGAGAGCTGGGCACGGGCCCATGTGAGCATCACTTTGGAAGTAGGGCTCTTCAACAGGGACCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp AGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCACTaGACTGGTTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAG +
Preference number: 1 (lower is better)
Translates to: RGSTEEKHHSGPVTH*TGFQPRRFQAGISK
Trigger: CTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAACCAGTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp ATCCTACTGGGAAGCCTGAGGTTCTCAAGGTCATCAGGCTTGGTTTaGGGGCAGCACCCTCATGGCTGCATTGCTGTTGTCATGAACACG +
Preference number: 1 (lower is better)
Translates to: ILLGSLRFSRSSGLV*GQHPHGCIAVVMNT
Trigger: CGTGTTCATGACAACAGCAATGCAGCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCCCAGTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp GGGACTCTTTTGCCTAAGCTGGTTCCCAAATCATGGAGGGAAATCTaGACCTGGCACCGGGAAGGGAACAACCTTCCCAACCTTCATTGC +
Preference number: 1 (lower is better)
Translates to: GTLLPKLVPKSWREI*TWHREGNNLPNLHC
Trigger: GCAATGAAGGTTGGGAAGGTTGTTCCCTTCCCGGTGCCAGGTCCAGATTTCCCTCCATGATTTGGGAACCAGCTTAGGCAAAAGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp GTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCACTGGACTaGTTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATAT +
Preference number: 1 (lower is better)
Translates to: VHRGEASFWASHPLD*FPTKEISSGDFQAY
Trigger: ATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAACCAGTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp TTGCTAGGTTGGTCCCCAGCGCCTGGGAGGGATGGGTCAGCCCACTaGGTTATTGATGATTTCCTTCCTAATTTCAGTTTCCACTATCTC +
Preference number: 1 (lower is better)
Translates to: LLGWSPAPGRDGSAH*VIDDFLPNFSFHYL
Trigger: GAGATAGTGGAAACTGAAATTAGGAAGGAAATCATCAATAACTCAGTGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAACCTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp TTTATTTTTAAGAGATGCTTTCTTGCAGGATCCTACTGGGAAGCCTaGGGTTCTCAAGGTCATCAGGCTTGGTTTGGGGGCAGCACCCTC +
Preference number: 1 (lower is better)
Translates to: FIFKRCFLAGSYWEA*GSQGHQAWFGGSTL
Trigger: GAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCCCAGTAGGATCCTGCAAGAAAGCATCTCTTAAAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 90 bp CCAATTTGCCAATTTCAGTGTGAATCACTAAGCTCTGACCTAGCTTaGCCCAGTGGTGAGATCAGTGGGTTCTCGTGTTTTTGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: PICQFQCESLSSDLA*PSGEISGFSCFWLR
Trigger: CCTGAGCCAAAAACACGAGAACCCACTGATCTCACCACTGGGGCAAGCTAGGTCAGAGCTTAGTGATTCACACTGAAATTGGCAAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 90 bp GAAAAAGCTTCCAGGAGCTGTTTTTCAGATACACCAACATATATTTaGCAAGGGCAGGCACTGTGTTTCTCCAGGCAGGCGGTAAGGCCT +
Preference number: 1 (lower is better)
Translates to: EKASRSCFSDTPTYI*QGQALCFSRQAVRP
Trigger: AGGCCTTACCGCCTGCCTGGAGAAACACAGTGCCTGCCCTTGGCAAATATATGTTGGTGTATCTGAAAAACAGCTCCTGGAAGCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 90 bp GCAATGACAGTCTTGGCCATGGGTCTAGACAACACACAATTCCAATaGAGCCTAGGAGGACATTATGGAAGTGAGCTGGGAGAACCAATG +
Preference number: 1 (lower is better)
Translates to: AMTVLAMGLDNTQFQ*SLGGHYGSELGEPM
Trigger: CATTGGTTCTCCCAGCTCACTTCCATAATGTCCTCCTAGGCTGCATTGGAATTGTGTGTTGTCTAGACCCATGGCCAAGACTGTCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp CAGAGTACTCATCCTAGAAATTTCTCAGGGGACAGATACATCCTGTaGTCAAACAAGATTGGGACCCATCGTACCCCGTCTTCCCTTAGA +
Preference number: 1 (lower is better)
Translates to: QSTHPRNFSGDRYIL*SNKIGTHRTPSSLR
Trigger: TCTAAGGGAAGACGGGGTACGATGGGTCCCAATCTTGTTTGATCACAGGATGTATCTGTCCCCTGAGAAATTTCTAGGATGAGTACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp CAAAGTCAAGTTCACATAGAGGAGATACAAGTAACCACAAGCCCTTaGGTAACCCACGCAAAGAAACTGCTTGGCTTTGGTCTAAATGAC +
Preference number: 1 (lower is better)
Translates to: QSQVHIEEIQVTTSP*VTHAKKLLGFGLND
Trigger: GTCATTTAGACCAAAGCCAAGCAGTTTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTACTTGTATCTCCTCTATGTGAACTTGACTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 90 bp ATGACTCCTGCCACACACACACTATTAATTGGGTTAAATCCAATTTaGCAATTTCAGTGTGAATCACTAAGCTCTGACCTAGCTTGCCCC +
Preference number: 1 (lower is better)
Translates to: MTPATHTLLIGLNPI*QFQCESLSSDLACP
Trigger: GGGGCAAGCTAGGTCAGAGCTTAGTGATTCACACTGAAATTGGCAAATTGGATTTAACCCAATTAATAGTGTGTGTGTGGCAGGAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp TGGACATGCTGCACTCAACACATACTTGCCGAATATATGACTAAATaGAGTCCTGAGTTCAGAGTACTCATCCTAGAAATTTCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: WTCCTQHILAEYMTK*SPEFRVLILEISQG
Trigger: CCCCTGAGAAATTTCTAGGATGAGTACTCTGAACTCAGGACTTCATTTAGTCATATATTCGGCAAGTATGTGTTGAGTGCAGCATGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 90 bp ACACGCAATCTTGGAATTAGTGAAGATTTCAGGACATATCCCTCTTaGCTATCTAGGATGTATTATAAAGGTAAGATTCCTGAGGTGGAG +
Preference number: 1 (lower is better)
Translates to: TRNLGISEDFRTYPS*LSRMYYKGKIPEVE
Trigger: CTCCACCTCAGGAATCTTACCTTTATAATACATCCTAGATAGGCAAGAGGGATATGTCCTGAAATCTTCACTAATTCCAAGATTGCGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 90 bp CCTCTTGCCTATCTAGGATGTATTATAAAGGTAAGATTCCTGAGGTaGAGCTCTATTAAAGGCAGCGGATCTCAAATTAGTTTTGATCAG +
Preference number: 1 (lower is better)
Translates to: PLAYLGCIIKVRFLR*SSIKGSGSQISFDQ
Trigger: CTGATCAAAACTAATTTGAGATCCGCTGCCTTTAATAGAGCTCCACCTCAGGAATCTTACCTTTATAATACATCCTAGATAGGCAAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 90 bp ACTATCTTATTGTCCATCATTTTAAGTCAAACATCCCCAGTTCAGTaGGAGTGTACATTCTCCAATATTACACACATAAGGAAAGATGGG +
Preference number: 1 (lower is better)
Translates to: TILLSIILSQTSPVQ*ECTFSNITHIRKDG
Trigger: CCCATCTTTCCTTATGTGTGTAATATTGGAGAATGTACACTCTCACTGAACTGGGGATGTTTGACTTAAAATGATGGACAATAAGATAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCAGTCCTCCTCCGAGGTaGGAGGGCTGGAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPSPPPR*EGWKHW
Trigger: CCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGCTCACATGGGCCCGTaGCCAGCTCTCTGCGGTGCC +
Preference number: 2 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATAHMGP*PALCGA
Trigger: GGCACCGCAGAGAGCTGGGCACGGGCCCATGTGAGC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGGGAGAGGTAATGGGTaGCGGAGGAGAGAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPGRGNG*RRREGG
Trigger: GCCTCCCTCTCTCCTCCGGCACCCATTACCTCTCCC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp AATCTGGACCTGGCACCGGGAAGGGAACAACCTTCCCAACCTTCATaGCTAGGTTGGTCCCCAGCGCCTGGGAGGGATGGGTCAGCCCAC +
Preference number: 2 (lower is better)
Translates to: NLDLAPGREQPSQPS*LGWSPAPGRDGSAH
Trigger: GTGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGGTTGTTCCCTTCCCGGTGCCAGGTCCAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCATCATGGAGGGAAATCTaGACCTGGCACCGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPSWREI*TWHREG
Trigger: CCCTTCCCGGTGCCAGGTCCAGATTTCCCTCCATGA...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACTGGAGGAGGGTACTTaGGCTGGTGTCTACCTGGCA +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPLEEGT*AGVYLA
Trigger: TGCCAGGTAGACACCAGCCCAAGTACCCTCCTCCAG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp CCTGGCACCGGGAAGGGAACAACCTTCCCAACCTTCATTGCTAGGTaGGTCCCCAGCGCCTGGGAGGGATGGGTCAGCCCACTGAGTTAT +
Preference number: 2 (lower is better)
Translates to: PGTGKGTTFPTFIAR*VPSAWEGWVSPLSY
Trigger: ATAACTCAGTGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGGTTGTTCCCTTCCCGGTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCAGCACTCCCGATGCCTaGGATCGGATCCGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATSTPDA*DRIRLL
Trigger: GAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCT...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCATTCAAGGGTCCCTGTTaGAGAGCCCTACTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPFKGPC*RALLPK
Trigger: CTTTGGAAGTAGGGCTCTTCAACAGGGACCCTTGAA...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp TGCCAAGGGCAGGCACTGTGTTTCTCCAGGCAGGCGGTAAGGCCTTaGACAGGGTTTCCAGGAAGACACATAGCAGCCAGAGAGTTGTGC +
Preference number: 2 (lower is better)
Translates to: CQGQALCFSRQAVRP*TGFPGRHIAARELC
Trigger: GCACAACTCTCTGGCTGCTATGTGTCTTCCTGGAAACCCTGTCAAAGGCCTTACCGCCTGCCTGGAGAAACACAGTGCCTGCCCTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCTAGCTCGAGCAGACTaGAGATACGCATTTGGATTT +
Preference number: 2 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPLARAD*RYAFGF
Trigger: AAATCCAAATGCGTATCTCCAGTCTGCTCGAGCTAG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp TGCAGGATCCTACTGGGAAGCCTGAGGTTCTCAAGGTCATCAGGCTaGGTTTGGGGGCAGCACCCTCATGGCTGCATTGCTGTTGTCATG +
Preference number: 2 (lower is better)
Translates to: CRILLGSLRFSRSSG*VWGQHPHGCIAVVM
Trigger: CATGACAACAGCAATGCAGCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCCCAGTAGGATCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGCTCTCTGCGGTGCCTaGGCATATTGTACATTTGCT +
Preference number: 2 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATALCGA*AYCTFA
Trigger: AGCAAATGTACAATATGCTCAGGCACCGCAGAGAGC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATGCTCAGGTGTACATGTaGACGTGCTCAGATGTGCAC +
Preference number: 2 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHAQVYM*TCSDVH
Trigger: GTGCACATCTGAGCACGTGCACATGTACACCTGAGC...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTTGCAGCTGGACTTGTaGGAGAGCACAGTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHLQLDL*ESTVQE
Trigger: CTCTTGCACTGTGCTCTCCCACAAGTCCAGCTGCAA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCTCATCAGGCTTGGTTTaGGGGCAGCACCCTCATGGC +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLSSGLV*GQHPHG
Trigger: GCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGA...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCCAAGGTCATCAGGCTTaGTTTGGGGGCAGCACCCTC +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLQGHQA*FGGSTL
Trigger: GAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTG...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGTGATCAAACAAGATTaGGACCCATCGTACCCCGTC +
Preference number: 2 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATVIKQD*DPSYPV
Trigger: GACGGGGTACGATGGGTCCCAATCTTGTTTGATCAC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGGAGAAGCATCATTCTaGGCCAGTCACCCACTGGAC +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHGEASF*ASHPLD
Trigger: GTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATCCTGGGATTCTGGGCTaGGACAAAGAACTCAATCCC +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHPGILG*DKELNP
Trigger: GGGATTGAGTTCTTTGTCTCAGCCCAGAATCCCAGG...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATTCCTACTGGGAAGCCTaGGGTTCTCAAGGTCATCAG +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHSYWEA*GSQGHQ
Trigger: CTGATGACCTTGAGAACCTCAGGCTTCCCAGTAGGA...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTGTCATCTCTGTGCCTaGACATGTGAAACTGGAGCC +
Preference number: 2 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHCHLCA*TCETGA
Trigger: GGCTCCAGTTTCACATGTGCAGGCACAGAGATGACA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGATCCTCCTCCGTGGTaGGCCCTGGAGTGGCAGGCT +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIDPPPW*ALEWQA
Trigger: AGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGGGAGTCAAGTTACATaGAAATTTTCAGCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPGSQVT*KFSAAQ
Trigger: CTGAGCAGCTGAAAATTTGCATGTAACTTGACTCCC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTTGGTCCCCAGCGCCTaGGAGGGATGGGTCAGCCCA +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIILVPSA*EGWVSP
Trigger: TGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCAAAGTGATGCTCACATaGGCCCGTGCCCAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLKVMLT*ARAQLS
Trigger: AGAGAGCTGGGCACGGGCCCATGTGAGCATCACTTT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp GCAGGTCCCATAGGTGGTGAGTCAGTCTACCTACCCTACCCGGCCTaGCAGCTTAATGCAGCTCTCTTGTTTTCAGCAGCTGCAGCAATT +
Preference number: 2 (lower is better)
Translates to: AGPIGGESVYLPYPA*QLNAALLFSAAAAI
Trigger: AATTGCTGCAGCTGCTGAAAACAAGAGAGCTGCATTAAGCTGCAAGGCCGGGTAGGGTAGGTAGACTGACTCACCACCTATGGGACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATCTGTGCCTGCACATGTaGAACTGGAGCCTTCTAATA +
Preference number: 2 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHLCLHM*NWSLLI
Trigger: TATTAGAAGGCTCCAGTTTCACATGTGCAGGCACAG...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATTTATGTAGGGGACTCTaGGGTGCGCTCCAACTAGAA +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHLCRGL*GALQLE
Trigger: TTCTAGTTGGAGCGCACCTCAGAGTCCCCTACATAA...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATTTCAAGCAATACTTCTaGCTCAGCCCCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHFKQYF*LSPLSS
Trigger: GCTACTCAGGGGGCTGAGGCAGAAGTATTGCTTGAA...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAGTGTGTGTAAGAAATaGATCAAAACAGTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPSVCKK*IKTVAS
Trigger: GGAGGCAACTGTTTTGATCCATTTCTTACACACACT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCAGCTTGCCCCAGTGGTaGGATCAGTGGGTTCTCGTG +
Preference number: 2 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPSLPQW*DQWVLV
Trigger: CACGAGAACCCACTGATCTCACCACTGGGGCAAGCT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAATTTTTGGGGGAAATaGCACGCAATCTTGGAATTA +
Preference number: 2 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPNFWGK*HAILEL
Trigger: TAATTCCAAGATTGCGTGTCATTTCCCCCAAAAATT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGGGATTACTTTAAAATaGCACTTTGCCGGAGACTTC +
Preference number: 2 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATGITLK*HFAGDF
Trigger: GAAGTCTCCGGCAAAGTGGCATTTTAAAGTAATCCC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATAGTTTCCACTATCTCTaGGTTGCAGCTGGACTTGTG +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHSFHYL*VAAGLV
Trigger: CACAAGTCCAGCTGCAACCCAGAGATAGTGGAAACT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATAGTTTGGAGCTAGCCTaGGGTTACAGTTTTCAGGGA +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHSLELA*GYSFQG
Trigger: TCCCTGAAAACTGTAACCCCAGGCTAGCTCCAAACT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp GTTGGTCCCCAGCGCCTGGGAGGGATGGGTCAGCCCACTGAGTTATaGATGATTTCCTTCCTAATTTCAGTTTCCACTATCTCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: VGPQRLGGMGQPTEL*MISFLISVSTISGL
Trigger: CAACCCAGAGATAGTGGAAACTGAAATTAGGAAGGAAATCATCAATAACTCAGTGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATCAGTATCAAAGCCAGTaGCCACATGTGTGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHQYQSQ*PHVCRK
Trigger: CTTTCTACACACATGTGGGCACTGGCTTTGATACTG...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTAACAGCAAGAACTCTTaGGCAGTGGTGGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIINSKNS*AVVGPG
Trigger: CCCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTAGCGCCTGGGAGGGATaGGTCAGCCCACTGAGTTAT +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIISAWEG*VSPLSY
Trigger: ATAACTCAGTGGGCTGACCCATCCCTCCCAGGCGCT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCAGGGAAATCTGGACCTaGCACCGGGAAGGGAACAAC +
Preference number: 2 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPREIWT*HREGNN
Trigger: GTTGTTCCCTTCCCGGTGCCAGGTCCAGATTTCCCT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCTCCGTGGTGCGCCCTaGAGTGGCAGGCTTCTCATT +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCLRGAP*SGRLLI
Trigger: AATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGTCAAGCCCACAGGCTaGATGGTGGGATTCCTGCTC +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCVKPTG*MVGFLL
Trigger: GAGCAGGAATCCCACCATTCAGCCTGTGGGCTTGAC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGCACACGTTCACATATaGGACCACCACTGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLAHVHI*DHHCSK
Trigger: TTTACTACAGTGGTGGTCGCATATGTGAACGTGTGC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCACTCACCCTTGGACATaGTGCACTCAACACATACTT +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLTHPWT*CTQHIL
Trigger: AAGTATGTGTTGAGTGCAGCATGTCCAAGGGTGAGT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCATTCCCTCCACACATaGAGCCTCGTCCACTCTGTC +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIHSLHT*SLVHSV
Trigger: GACAGAGTGGACGAGGCTGCATGTGTGGAGGGAATG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp TCCTTCCTAATTTCAGTTTCCACTATCTCTGGGTTGCAGCTGGACTaGTGGGAGAGCACAGTGCAAGAGACAGGAATAAGCAGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: SFLISVSTISGLQLD*WESTVQETGISRVR
Trigger: CCTTACCCTGCTTATTCCTGTCTCTTGCACTGTGCTCTCCCACAAGTCCAGCTGCAACCCAGAGATAGTGGAAACTGAAATTAGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp AGAAAAAGCTTCCAGGAGCTGTTTTTCAGATACACCAACATATATTaGCCAAGGGCAGGCACTGTGTTTCTCCAGGCAGGCGGTAAGGCC +
Preference number: 2 (lower is better)
Translates to: RKSFQELFFRYTNIY*PRAGTVFLQAGGKA
Trigger: GGCCTTACCGCCTGCCTGGAGAAACACAGTGCCTGCCCTTGGCAAATATATGTTGGTGTATCTGAAAAACAGCTCCTGGAAGCTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGAAAAGAAAACCCAGTaGGCCTATGAAGTGTTGATT +
Preference number: 2 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHEKKTQ*AYEVLI
Trigger: AATCAACACTTCATAGGCTCACTGGGTTTTCTTTTC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCAGGACTTAGCAGGCTaGCACACTAGAGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIQDLAG*HTRALS
Trigger: AGACAGAGCTCTAGTGTGCCAGCCTGCTAAGTCCTG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCCGTCAATGGGAGTCCTaGAGATTAATGGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPRQWES*RLMALS
Trigger: ACTCAAGGCCATTAATCTTCAGGACTCCCATTGACG...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCTGGCTTTGGTCTAAATaGCTTACATTTTTCCTCGCT +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLWLWSK*LTFFLA
Trigger: AGCGAGGAAAAATGTAAGTCATTTAGACCAAAGCCA...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCAACCCAGTGAGCCTATaGAGTGTTGATTCTCATTTT +
Preference number: 2 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLNPVSL*SVDSHF
Trigger: AAAATGAGAATCAACACTTCATAGGCTCACTGGGTT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCCCAGCTCTCTGCGGTaGCTGAGCATATTGTACATT +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIPSSLR*LSILYI
Trigger: AATGTACAATATGCTCAGGCACCGCAGAGAGCTGGG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGTAGTCACAGACTTCTaGAGGAGGGTACTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCVVTDF*RRVLGL
Trigger: CAGCCCAAGTACCCTCCTCCAGAAGTCTGTGACTAC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAGACCAGATTGGTGTTaGGGTGGGCAGAGGTCTGAT +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCRPDWC*GGQRSD
Trigger: ATCAGACCTCTGCCCACCCCAACACCAATCTGGTCT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGGAGGAGCTATGGGATaGCCAGAGGTTGCTAAGACC +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFGGAMG*PEVAKT
Trigger: GGTCTTAGCAACCTCTGGGCATCCCATAGCTCCTCC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACCCTTCATTGCTAGGTTaGTCCCCAGCGCCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNPSLLG*SPAPGR
Trigger: CCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGG...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCTGGTTCCCAAATCATaGAGGGAAATCTGGACCTGG +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCLVPKS*REIWTW
Trigger: CCAGGTCCAGATTTCCCTCCATGATTTGGGAACCAG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGGGTTCTCGTGTTTTTaGCTCAGGTGTACATGTGCA +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIGFSCF*LRCTCA
Trigger: TGCACATGTACACCTGAGCCAAAAACACGAGAACCC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp CTAGAAATTTCTCAGGGGACAGATACATCCTGTGATCAAACAAGATaGGGACCCATCGTACCCCGTCTTCCCTTAGAAAGTCCTAATACG +
Preference number: 2 (lower is better)
Translates to: LEISQGTDTSCDQTR*GPIVPRLPLESPNT
Trigger: CGTATTAGGACTTTCTAAGGGAAGACGGGGTACGATGGGTCCCAATCTTGTTTGATCACAGGATGTATCTGTCCCCTGAGAAATTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGCCCTACTTCCAAAGTaGTGCTCACATGGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNALLPK*CSHGPV
Trigger: CACGGGCCCATGTGAGCATCACTTTGGAAGTAGGGC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAAGGTCCCATAGGTGGTaGGTCAGTCTACCTACCCTA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSRSHRW*VSLPTL
Trigger: TAGGGTAGGTAGACTGACTCACCACCTATGGGACCT...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGACAGATACATCCTGTaGTCAAACAAGATTGGGACC +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCDRYIL*SNKIGT
Trigger: GGTCCCAATCTTGTTTGATCACAGGATGTATCTGTC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGACCATGGTATGACATaGGAAAGGCAACCCCAGACT +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFDHGMT*ERQPQT
Trigger: AGTCTGGGGTTGCCTTTCTCATGTCATACCATGGTC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACCACTATCTCTGGGTTaGAGCTGGACTTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSPLSLG*SWTCGR
Trigger: TCTCCCACAAGTCCAGCTGCAACCCAGAGATAGTGG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGAGGGACATGACTCCTaGCACACACACACTATTAAT +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCEGHDS*HTHTIN
Trigger: ATTAATAGTGTGTGTGTGGCAGGAGTCATGTCCCTC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACATGCCTCTGATAATGTaGCCCAGCCTCTGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNMPLIM*PSLWSC
Trigger: GCAGGACCAGAGGCTGGGGCACATTATCAGAGGCAT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCTCTCTCACTCACCCTTaGACATGCTGCACTCAACAC +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFSLTHP*TCCTQH
Trigger: GTGTTGAGTGCAGCATGTCCAAGGGTGAGTGAGAGA...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp TTATTGATGATTTCCTTCCTAATTTCAGTTTCCACTATCTCTGGGTaGCAGCTGGACTTGTGGGAGAGCACAGTGCAAGAGACAGGAATA +
Preference number: 2 (lower is better)
Translates to: LLMISFLISVSTISG*QLDLWESTVQETGI
Trigger: TATTCCTGTCTCTTGCACTGTGCTCTCCCACAAGTCCAGCTGCAACCCAGAGATAGTGGAAACTGAAATTAGGAAGGAAATCATCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACAGCTCTGACCTAGCTTaGCCCAGTGGTGAGATCAGT +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNSSDLA*PSGEIS
Trigger: ACTGATCTCACCACTGGGGCAAGCTAGGTCAGAGCT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACCCTCATGGCTGCATTaGTGTTGTCATGAACACGTG +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSPSWLH*CCHEHV
Trigger: CACGTGTTCATGACAACAGCAATGCAGCCATGAGGG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACAGCACCCTCATGGCTaGATTGCTGTTGTCATGAAC +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSQHPHG*IAVVMN
Trigger: GTTCATGACAACAGCAATGCAGCCATGAGGGTGCTG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCTTCTCAAACCAGAGATaGGCTTTGTGGAATGGGCCT +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFFSNQR*ALWNGP
Trigger: AGGCCCATTCCACAAAGCCCATCTCTGGTTTGAGAA...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAAATCTGCAAGTATTTaGGAAGCTGATGTGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCKSASI*EADVWR
Trigger: CCTCCACACATCAGCTTCCCAAATACTTGCAGATTT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 90 bp TGTAATATCAGCACAATTGATTATTTAGCCCAAGGTCTCAGTCAGTaGATGGCTACAAGTGTTAAGTACCACAAGCCCCACCTCTATCTC +
Preference number: 2 (lower is better)
Translates to: CNISTIDYLAQGLSQ*MATSVKYHKPHLYL
Trigger: GAGATAGAGGTGGGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAAATAATCAATTGTGCTGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGATGGGTCAGCCCACTaGGTTATTGATGATTTCCTT +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFDGSAH*VIDDFL
Trigger: AAGGAAATCATCAATAACTCAGTGGGCTGACCCATC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCTTGTGGGGACTCTTTTaGCTAAGCTGGTTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFLWGLF*LSWFPN
Trigger: ATTTGGGAACCAGCTTAGGCAAAAGAGTCCCCACAA...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGGAGGGTACTTGGGCTaGTGTCTACCTGGCATATTT +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNGGYLG*CLPGIF
Trigger: AAATATGCCAGGTAGACACCAGCCCAAGTACCCTCC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGTAACCACAAGCCCTTaGGTAACCCACGCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNVTTSP*VTHAKK
Trigger: TTTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTAC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTAAACCTTCATCAATCTaGATACAATTCACCATAAGG +
Preference number: 2 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIKPSSI*IQFTIR
Trigger: CCTTATGGTGAATTGTATGCAGATTGATGAAGGTTT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACGAGCACTGCATTGCTaGCAGCTAGACTTTATAGTA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSRALHC*QLDFIV
Trigger: TACTATAAAGTCTAGCTGCCAGCAATGCAGTGCTCG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGCACTGGACTATGGATaGTTCCTATTTGAACCACAA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSALDYG*FLFEPQ
Trigger: TTGTGGTTCAAATAGGAATCATCCATAGTCCAGTGC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGCAGCAATTGAAAATTaGAACCAACTCGAGGCAACA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSAAIEN*NQLEAT
Trigger: TGTTGCCTCGAGTTGGTTGCAATTTTCAATTGCTGC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGCCGGTAATTACATGTaGGCAGACTTAGCCAGAATA +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNAGNYM*ADLARI
Trigger: TATTCTGGCTAAGTCTGCCCACATGTAATTACCGGC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACTCCCAAATGTCACCCTaGAACCAAAGTACAGAGTTA +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNSQMSP*NQSTEL
Trigger: TAACTCTGTACTTTGGTTTCAGGGTGACATTTGGGA...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACAAGGTCTCAGTCAGTTaGTGGCTACAAGTGTTAAGT +
Preference number: 2 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNKVSVS*WLQVLS
Trigger: ACTTAACACTTGTAGCCATCAACTGACTGAGACCTT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACCTCTTACTTCATCCTaGTTCAGTATTGCTCAAGAA +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSPLTSS*FSIAQE
Trigger: TTCTTGAGCAATACTGAAGCAGGATGAAGTAAGAGG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATTTAGACTCTACTTTTaGAATCATTGTCTAGGCAGC +
Preference number: 2 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSFRLYF*NHCLGS
Trigger: GCTGCCTAGACAATGATTTCAAAAGTAGAGTCTAAA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCACCTTCATTGCTAGGTaGGTCCCCAGCGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPTFIAR*VPSAWE
Trigger: CTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp GGGAGCCAGGTCTTCTTGTCTGGGGATCCTCCTCCGTaGTGCGCCCTGGAGTGGCAGGCTTCTCATTGGAGT +
Preference number: 3 (lower is better)
Translates to: GSQVFLSGDPPP*CALEWQASHWS
Trigger: ACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp AGCCAGGTCTTCTTGTCTGGGGATCCTCCTCCGTGGTaGGCCCTGGAGTGGCAGGCTTCTCATTGGAGTAGC +
Preference number: 3 (lower is better)
Translates to: SQVFLSGDPPPW*ALEWQASHWSS
Trigger: GCTACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGACCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp GGGAAGCTGATGTGTGGAGGCAGGTCCCATAGGTGGTaGGTCAGTCTACCTACCCTACCCGGCCTTGCAGCT +
Preference number: 3 (lower is better)
Translates to: GKLMCGGRSHRW*VSLPTLPGLAA
Trigger: AGCTGCAAGGCCGGGTAGGGTAGGTAGACTGACTCACCACCTATGGGACCTGCCTCCACACATCAGCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp TCTTCTTGTCTGGGGATCCTCCTCCGTGGTGCGCCCTaGAGTGGCAGGCTTCTCATTGGAGTAGCTCCACGA +
Preference number: 3 (lower is better)
Translates to: SSCLGILLRGAP*SGRLLIGVAPR
Trigger: TCGTGGAGCTACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATCCCCAGACAAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGGGAGCCAGGTCTTCTaGTCTGGGGATCCTCCTCCG +
Preference number: 3 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHGSQVF*SGDPPP
Trigger: CGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCCC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATCCTTCCCAACCTTCATaGCTAGGTTGGTCCCCAGCG +
Preference number: 3 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHPSQPS*LGWSPA
Trigger: CGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGG...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp CTGTTGAAGAGCCCTACTTCCAAAGTGATGCTCACATaGGCCCGTGCCCAGCTCTCTGCGGTGCCTGAGCAT +
Preference number: 3 (lower is better)
Translates to: LLKSPTSKVMLT*ARAQLSAVPEH
Trigger: ATGCTCAGGCACCGCAGAGAGCTGGGCACGGGCCCATGTGAGCATCACTTTGGAAGTAGGGCTCTTCAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp CCTCTCCTGGTCTCCTCCGCTCCCCAGCCAGGACCATaGTATGACATGAGAAAGGCAACCCCAGACTCCATA +
Preference number: 3 (lower is better)
Translates to: PLLVSSAPQPGP*YDMRKATPDSI
Trigger: TATGGAGTCTGGGGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp GGAAGCCTGAGGTTCTCAAGGTCATCAGGCTTGGTTTaGGGGCAGCACCCTCATGGCTGCATTGCTGTTGTC +
Preference number: 3 (lower is better)
Translates to: GSLRFSRSSGLV*GQHPHGCIAVV
Trigger: GACAACAGCAATGCAGCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp TGGGATGCCCAGAGGTTGCTAAGACCAGATTGGTGTTaGGGTGGGCAGAGGTCTGATCTCCTCTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: WDAQRLLRPDWC*GGQRSDLLSWS
Trigger: AGACCAGGAGAGGAGATCAGACCTCTGCCCACCCCAACACCAATCTGGTCTTAGCAACCTCTGGGCATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp GAGCTATGGGATGCCCAGAGGTTGCTAAGACCAGATTaGTGTTGGGGTGGGCAGAGGTCTGATCTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: ELWDAQRLLRPD*CWGGQRSDLLS
Trigger: GGAGAGGAGATCAGACCTCTGCCCACCCCAACACCAATCTGGTCTTAGCAACCTCTGGGCATCCCATAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp AGGGCTGGAAGCACTGGTCTCCATGGATCAGCGTTCTaGCCTGGTAGGCCCCTTATTTCATTCCCTCCACAC +
Preference number: 3 (lower is better)
Translates to: RAGSTGLHGSAF*PGRPLISFPPH
Trigger: GTGTGGAGGGAATGAAATAAGGGGCCTACCAGGCCAGAACGCTGATCCATGGAGACCAGTGCTTCCAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCGGTGCCTGAGCATATaGTACATTTGCTTAACGATA +
Preference number: 3 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPRCLSI*YICLTI
Trigger: TATCGTTAAGCAAATGTACAATATGCTCAGGCACCG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp ACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCACTaGACTGGTTTCCAACCAAGGAGATTTCAAGCGGGG +
Preference number: 3 (lower is better)
Translates to: TEEKHHSGPVTH*TGFQPRRFQAG
Trigger: CCCCGCTTGAAATCTCCTTGGTTGGAAACCAGTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp TGCCCCAGTGGTGAGATCAGTGGGTTCTCGTGTTTTTaGCTCAGGTGTACATGTGCACGTGCTCAGATGTGC +
Preference number: 3 (lower is better)
Translates to: CPSGEISGFSCF*LRCTCARAQMC
Trigger: GCACATCTGAGCACGTGCACATGTACACCTGAGCCAAAAACACGAGAACCCACTGATCTCACCACTGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp AAGGTCATCAGGCTTGGTTTGGGGGCAGCACCCTCATaGCTGCATTGCTGTTGTCATGAACACGTGAACACG +
Preference number: 3 (lower is better)
Translates to: KVIRLGLGAAPS*LHCCCHEHVNT
Trigger: CGTGTTCACGTGTTCATGACAACAGCAATGCAGCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp AAGAGATGCTTTCTTGCAGGATCCTACTGGGAAGCCTaGGGTTCTCAAGGTCATCAGGCTTGGTTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: KRCFLAGSYWEA*GSQGHQAWFGG
Trigger: GCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCCCAGTAGGATCCTGCAAGAAAGCATCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp GGAGAAGCATCATTCTGGGCCAGTCACCCACTGGACTaGTTTCCAACCAAGGAGATTTCAAGCGGGGATTTC +
Preference number: 3 (lower is better)
Translates to: GEASFWASHPLD*FPTKEISSGDF
Trigger: GAAATCCCCGCTTGAAATCTCCTTGGTTGGAAACCAGTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCAACAGCAAGAACTCTaGGGCAGTGGTGGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIQQQEL*GSGGPR
Trigger: CCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTTG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCGGGTTGCAGCTGGACTaGTGGGAGAGCACAGTGCAA +
Preference number: 3 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPGLQLD*WESTVQ
Trigger: TTGCACTGTGCTCTCCCACAAGTCCAGCTGCAACCC...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTCTGGAGGAGGGTACTaGGGCTGGTGTCTACCTGGC +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIISGGGY*GWCLPG
Trigger: GCCAGGTAGACACCAGCCCAAGTACCCTCCTCCAGA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCCTACTTTTGAAATCATaGTCTAGGCAGCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATLLLKS*SRQPFL
Trigger: GAGGAAAGGCTGCCTAGACAATGATTTCAAAAGTAG...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCCATCCTGCTTCAGTATaGCTCAAGAAAATGAAGCAA +
Preference number: 3 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATHPASV*LKKMKQ
Trigger: TTGCTTCATTTTCTTGAGCAATACTGAAGCAGGATG...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTCAAGGTCATCAGGCTaGGTTTGGGGGCAGCACCCT +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIISRSSG*VWGQHP
Trigger: AGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp CATATTAGCCAGGATAGTCTCAATCTCCTGACCTTGTaGTCTGTCCGTCTCGGCCTCCCAAAGTGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: HISQDSLNLLTL*SVRLGLPKCWD
Trigger: ATCCCAGCACTTTGGGAGGCCGAGACGGACAGATCACAAGGTCAGGAGATTGAGACTATCCTGGCTAATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp CCCAAGTGCCCTTCCAAATGCCAGTATCAAAGCCAGTaGCCACATGTGTGTAGAAAGTTCAGGAGGGTTCAG +
Preference number: 3 (lower is better)
Translates to: PKCPSKCQYQSQ*PHVCRKFRRVQ
Trigger: CTGAACCCTCCTGAACTTTCTACACACATGTGGGCACTGGCTTTGATACTGGCATTTGGAAGGGCACTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGATCTCAAATTAGTTTaGATCAGCCTCCACTTAGGC +
Preference number: 3 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHDLKLV*ISLHLG
Trigger: GCCTAAGTGGAGGCTGATCAAAACTAATTTGAGATC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp GTCTTGGCCATGGGTCTAGACAACACACAATTCCAATaGAGCCTAGGAGGACATTATGGAAGTGAGCTGGGA +
Preference number: 3 (lower is better)
Translates to: VLAMGLDNTQFQ*SLGGHYGSELG
Trigger: TCCCAGCTCACTTCCATAATGTCCTCCTAGGCTGCATTGGAATTGTGTGTTGTCTAGACCCATGGCCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp CTCCGCCCTTCCCTATTCTTACAGGACTTAGCAGGCTaGCACACTAGAGCTCTGTCTTTCAAAGTCAAGTTC +
Preference number: 3 (lower is better)
Translates to: LRPSLFLQDLAG*HTRALSFKVKF
Trigger: GAACTTGACTTTGAAAGACAGAGCTCTAGTGTGCCAGCCTGCTAAGTCCTGTAAGAATAGGGAAGGGCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGTCATCAGGCTTGGTTaGGGGGCAGCACCCTCATGG +
Preference number: 3 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFVIRLG*GAAPSW
Trigger: CCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGAC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp TTTGGTAAGACCCAAATCTGCAAGTATTTGGGAAGCTaGTGTGTGGAGGCAGGTCCCATAGGTGGTGAGTCA +
Preference number: 3 (lower is better)
Translates to: FGKTQICKYLGS*CVEAGPIGGES
Trigger: TGACTCACCACCTATGGGACCTGCCTCCACACATCAGCTTCCCAAATACTTGCAGATTTGGGTCTTACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGTTCAAGGGTCCCTGTaGAAGAGCCCTACTTCCAAA +
Preference number: 3 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCVQGSL*KSPTSK
Trigger: TTTGGAAGTAGGGCTCTTCAACAGGGACCCTTGAAC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCTTAATGCAGCTCTCTaGTTTTCAGCAGCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIILNAAL*FSAAAA
Trigger: TGCTGCAGCTGCTGAAAACAAGAGAGCTGCATTAAG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp CATCCTAGAAATTTCTCAGGGGACAGATACATCCTGTaGTCAAACAAGATTGGGACCCATCGTACCCCGTCT +
Preference number: 3 (lower is better)
Translates to: HPRNFSGDRYIL*SNKIGTHRTPS
Trigger: AGACGGGGTACGATGGGTCCCAATCTTGTTTGATCACAGGATGTATCTGTCCCCTGAGAAATTTCTAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp CAATTTCAGTGTGAATCACTAAGCTCTGACCTAGCTTaGCCCAGTGGTGAGATCAGTGGGTTCTCGTGTTTT +
Preference number: 3 (lower is better)
Translates to: QFQCESLSSDLA*PSGEISGFSCF
Trigger: AAAACACGAGAACCCACTGATCTCACCACTGGGGCAAGCTAGGTCAGAGCTTAGTGATTCACACTGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCAAGGTCTCAGTCAGTaGATGGCTACAAGTGTTAAG +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIQGLSQ*MATSVK
Trigger: CTTAACACTTGTAGCCATCAACTGACTGAGACCTTG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTATAGGAGGCCTAACTTaGGGTGGTGTAGATACAGAT +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIIGGLT*GGVDTD
Trigger: ATCTGTATCTACACCACCCAAAGTTAGGCCTCCTAT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCTGGGATGCCCAGAGGTaGCTAAGACCAGATTGGTGT +
Preference number: 3 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFWDAQR*LRPDWC
Trigger: ACACCAATCTGGTCTTAGCAACCTCTGGGCATCCCA...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp GTTCACATAGAGGAGATACAAGTAACCACAAGCCCTTaGGTAACCCACGCAAAGAAACTGCTTGGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: VHIEEIQVTTSP*VTHAKKLLGFG
Trigger: ACCAAAGCCAAGCAGTTTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTACTTGTATCTCCTCTATGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCCAGCCCACTGAGTTATaGATGATTTCCTTCCTAATT +
Preference number: 3 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPQPTEL*MISFLI
Trigger: AATTAGGAAGGAAATCATCAATAACTCAGTGGGCTG...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGCTGAAAGGAATGTTTaGGACATTATAGGAGGCCTA +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIAERNV*DIIGGL
Trigger: TAGGCCTCCTATAATGTCCAAAACATTCCTTTCAGC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCATCTCTCACTCACCCTaGGACATGCTGCACTCAACA +
Preference number: 3 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFISHSP*DMLHST
Trigger: TGTTGAGTGCAGCATGTCCAAGGGTGAGTGAGAGAT...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATGGGTTCTCGTGTTTTaGGCTCAGGTGTACATGTGC +
Preference number: 3 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSWVLVF*AQVYMC
Trigger: GCACATGTACACCTGAGCCAAAAACACGAGAACCCA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTTCTTGATTCCTCTTTaGCCTTTCAAAGTCATGGTC +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIFLIPL*PFKVMV
Trigger: GACCATGACTTTGAAAGGCAAAAGAGGAATCAAGAA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGCTGCAGCAATTCTCTaGGATTTTCCAATAGAGTTA +
Preference number: 3 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIAAAIL*DFPIEL
Trigger: TAACTCTATTGGAAAATCCAAGAGAATTGCTGCAGC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATGTGATCAAACAAGATaGGGACCCATCGTACCCCGT +
Preference number: 3 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSCDQTR*GPIVPR
Trigger: ACGGGGTACGATGGGTCCCAATCTTGTTTGATCACA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp AAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTaGCCATATCATTCAAGGATCAACCGTACTTTCATA +
Preference number: 3 (lower is better)
Translates to: KLHANFQLLRGR*PYHSRINRTFI
Trigger: TATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp TATCTTAATAATGGGTACTTCTCTGAATTTCCCAAGTaGCCTTCCAAATGCCAGTATCAAAGCCAGTGCCCA +
Preference number: 3 (lower is better)
Translates to: YLNNGYFSEFPK*PSKCQYQSQCP
Trigger: TGGGCACTGGCTTTGATACTGGCATTTGGAAGGGCACTTGGGAAATTCAGAGAAGTACCCATTATTAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAAGTAACCACAAGCCCTaGAGTAACCCACGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSSNHKP*SNPRKE
Trigger: TTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTACT...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCAATGGATCAAAACAGTaGCCTCCAGGGAGAGGTAAT +
Preference number: 3 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFNGSKQ*PPGRGN
Trigger: ATTACCTCTCCCTGGAGGCAACTGTTTTGATCCATT...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACAACCAGAGATGGGCTTaGTGGAATGGGCCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNNQRWA*WNGPKV
Trigger: TACTTTAGGCCCATTCCACAAAGCCCATCTCTGGTT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR GCA 72 bp CCCAGCTCTCTGCGGTGCCTGAGCATATTGTACATTTaGTTAACGATAATGAATTTAGTACTTATTTTGCAG +
Preference number: 3 (lower is better)
Translates to: PSSLRCLSILYI*LTIMNLVLILQ
Trigger: CTGCAAAATAAGTACTAAATTCATTATCGTTAAGCAAATGTACAATATGCTCAGGCACCGCAGAGAGCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGAGTTAAGCAAATTTTaGGGGGAAATGACACGCAAT +
Preference number: 3 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSELSKF*GEMTRN
Trigger: ATTGCGTGTCATTTCCCCCAAAAATTTGCTTAACTC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR TCA 72 bp TGCACTCAACACATACTTGCCGAATATATGACTAAATaGAGTCCTGAGTTCAGAGTACTCATCCTAGAAATT +
Preference number: 3 (lower is better)
Translates to: CTQHILAEYMTK*SPEFRVLILEI
Trigger: AATTTCTAGGATGAGTACTCTGAACTCAGGACTTCATTTAGTCATATATTCGGCAAGTATGTGTTGAGTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CCA 72 bp TATCTAGGATGTATTATAAAGGTAAGATTCCTGAGGTaGAGCTCTATTAAAGGCAGCGGATCTCAAATTAGT +
Preference number: 3 (lower is better)
Translates to: YLGCIIKVRFLR*SSIKGSGSQIS
Trigger: ACTAATTTGAGATCCGCTGCCTTTAATAGAGCTCCACCTCAGGAATCTTACCTTTATAATACATCCTAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCGCTCGGACACCTCCTTaGCTTTCTTCCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPARTPP*LSSSGP
Trigger: TGGCCCGGAGGAAGAAAGCCAAGGAGGTGTCCGAGC...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCTCCCTCACAGGCAATaGCAGTCTTGGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPLPHRQ*QSWPWV
Trigger: GACCCATGGCCAAGACTGTCATTGCCTGTGAGGGAG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATGCTCACATGGGCCCGTaGCCAGCTCTCTGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHAHMGP*PALCGA
Trigger: GGCACCGCAGAGAGCTGGGCACGGGCCCATGTGAGC...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCAGCGCCTGGGAGGGATaGGTCAGCCCACTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPSAWEG*VSPLSY
Trigger: ATAACTCAGTGGGCTGACCCATCCCTCCCAGGCGCT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCTTGGTCCCCAGCGCCTaGGAGGGATGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATLVPSA*EGWVSP
Trigger: TGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAA...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCTCATCAGGCTTGGTTTaGGGGCAGCACCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPSSGLV*GQHPHG
Trigger: GCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGA...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp CTGGCACCGGGAAGGGAACAACCTTCCCAACCTTCATaGCTAGGTTGGTCCCCAGCGCCTGGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LAPGREQPSQPS*LGWSPAPGRDG
Trigger: CCCATCCCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGGTTGTTCCCTTCCCGGTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAGCTTGCCCCAGTGGTaGGATCAGTGGGTTCTCGTG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPSLPQW*DQWVLV
Trigger: CACGAGAACCCACTGATCTCACCACTGGGGCAAGCT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGCCCTACTTCCAAAGTaGTGCTCACATGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPALLPK*CSHGPV
Trigger: CACGGGCCCATGTGAGCATCACTTTGGAAGTAGGGC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCGCCAGGACCATGGTATaGCATGAGAAAGGCAACCCC +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPARTMV*HEKGNP
Trigger: GGGGTTGCCTTTCTCATGTCATACCATGGTCCTGGC...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCGAGCAGGTGTAAGATaGCCACCAGGCTCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPRAGVR*PPGSWH
Trigger: ATGCCAAGAGCCTGGTGGCCATCTTACACCTGCTCG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAACAGCAAGAACTCTTaGGCAGTGGTGGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPNSKNS*AVVGPG
Trigger: CCCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCAAGCACTGGTCTCCATaGATCAGCGTTCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPKHWSP*ISVLAW
Trigger: CCAGGCCAGAACGCTGATCCATGGAGACCAGTGCTT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp GGGAAGGGAACAACCTTCCCAACCTTCATTGCTAGGTaGGTCCCCAGCGCCTGGGAGGGATGGGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKGTTFPTFIAR*VPSAWEGWVSP
Trigger: TGGGCTGACCCATCCCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGGTTGTTCCCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAAAAGCCCTTGGTGGTaGGCTTGGTCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPKSPWW*AWSPSQ
Trigger: CTGTGAGGGAGACCAAGCTCACCACCAAGGGCTTTT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAATGCCTCTGATAATGTaGCCCAGCCTCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPMPLIM*PSLWSC
Trigger: GCAGGACCAGAGGCTGGGGCACATTATCAGAGGCAT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGGCAGGAACACAGGCTaGTCAGCCCAGGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHGRNTG*SAQGVH
Trigger: GTGGACCCCCTGGGCTGAGCAGCCTGTGTTCCTGCC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAAAGTGATGCTCACATaGGCCCGTGCCCAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPKVMLT*ARAQLS
Trigger: AGAGAGCTGGGCACGGGCCCATGTGAGCATCACTTT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCTGCCCCAAGTGCAGTaGATCAGAGAGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPLPQVQ*IRELRT
Trigger: TGTTCTGAGCTCTCTGATCCACTGCACTTGGGGCAG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCATTTCAGGTCACAGTTaGCTATGTCTTCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPISGHS*LCLLAA
Trigger: CGCGGCCAGAAGACATAGTCAACTGTGACCTGAAAT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACCTGGGATTCTGGGCTaGGACAAAGAACTCAATCCC +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPPGILG*DKELNP
Trigger: GGGATTGAGTTCTTTGTCTCAGCCCAGAATCCCAGG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAGTCCTCCTCCGAGGTaGGAGGGCTGGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKSPPPR*EGWKHW
Trigger: CCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACCACTATCTCTGGGTTaGAGCTGGACTTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPPLSLG*SWTCGR
Trigger: TCTCCCACAAGTCCAGCTGCAACCCAGAGATAGTGG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGCTCAGGTGTACATGTaGACGTGCTCAGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPAQVYM*TCSDVH
Trigger: GTGCACATCTGAGCACGTGCACATGTACACCTGAGC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGGGACGGGGGCGACTTaGGAGTGGGAGACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLGTGAT*EWETWG
Trigger: TCCCCAAGTCTCCCACTCCCAAGTCGCCCCCGTCCC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCGGAGGGTACTTGGGCTaGTGTCTACCTGGCATATTT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPGGYLG*CLPGIF
Trigger: AAATATGCCAGGTAGACACCAGCCCAAGTACCCTCC...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCCAAGGTCATCAGGCTTaGTTTGGGGGCAGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATQGHQA*FGGSTL
Trigger: GAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTG...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCTCTCTCACTCACCCTTaGACATGCTGCACTCAACAC +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPSLTHP*TCCTQH
Trigger: GTGTTGAGTGCAGCATGTCCAAGGGTGAGTGAGAGA...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAACCCTCCATCTTGCATaGGCTCAAAGGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPTLHLA*AQRQRR
Trigger: TCTCCTTTGCCTTTGAGCTCATGCAAGATGGAGGGT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCGTCAATGGGAGTCCTaGAGATTAATGGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPRQWES*RLMALS
Trigger: ACTCAAGGCCATTAATCTTCAGGACTCCCATTGACG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGCTCTCTGCGGTGCCTaGGCATATTGTACATTTGCT +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPALCGA*AYCTFA
Trigger: AGCAAATGTACAATATGCTCAGGCACCGCAGAGAGC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCAGGAATCATCTTTCTTaGGGGACGGGGGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATRNHLS*GTGATW
Trigger: CCAAGTCGCCCCCGTCCCGCAAGAAAGATGATTCCT...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGAGAGGCACAGAGAATaGACCCCCTGCCCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHERHRE*TPCPKC
Trigger: GCACTTGGGGCAGGGGGTGCATTCTCTGTGCCTCTC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCATGGACCACAACCACTTaGATGGAAACATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPWTTTT*METWSG
Trigger: CCCAGACCATGTTTCCATCCAAGTGGTTGTGGTCCA...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAGCTTGTCTGGGGCATaGTCGAACAAGGTGTCAAAG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPSLSGA*SNKVSK
Trigger: CTTTGACACCTTGTTCGACCATGCCCCAGACAAGCT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACACATTCAGCTTGTCTaGGGCATGGTCGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPHIQLV*GMVEQG
Trigger: ACCTTGTTCGACCATGCCCCAGACAAGCTGAATGTG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGCCTTCATTGCTAGGTTaGTCCCCAGCGCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKPSLLG*SPAPGR
Trigger: CCTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGG...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTGGTGCGCCCTGGAGTaGCAGGCTTCTCATTGGAGT +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHWCALE*QASHWS
Trigger: ACTCCAATGAGAAGCCTGCCACTCCAGGGCGCACCA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATAGCCCCCTGAGTAGCTaGGATTACAGGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHSPLSS*DYRHAP
Trigger: TGGTGCGTGCCTGTAATCCCAGCTACTCAGGGGGCT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCAGTCACCCACTGGACTaGTTTCCAACCAAGGAGATT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPSHPLD*FPTKEI
Trigger: AATCTCCTTGGTTGGAAACCAGTCCAGTGGGTGACT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCACATCCCCAGTTCAGTaGGAGTGTACATTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPTSPVQ*ECTFSN
Trigger: ATTGGAGAATGTACACTCTCACTGAACTGGGGATGT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCATTTCCTCTTGGATTTaGCGAGACTGGAGGATTCCT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPISSWI*RDWRIP
Trigger: AGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAAT...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTACTTCTGCGGGGAGGTaGCCATGGCGCGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIITSAGR*PWRGAG
Trigger: GCCTGCGCCGCGCCATGGCCACCTCCCCGCAGAAGT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGATGGAAACATGGTCTaGGAGTCGAATTGGTGCGCG +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATDGNMV*ESNWCA
Trigger: CGCGCACCAATTCGACTCCCAGACCATGTTTCCATC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCATGGATTTGCCGAGACTaGAGGATTCCTTCTCGTTTC +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPWICRD*RIPSRF
Trigger: GAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCA...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATAGGGAAATCTGGACCTaGCACCGGGAAGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHREIWT*HREGNN
Trigger: GTTGTTCCCTTCCCGGTGCCAGGTCCAGATTTCCCT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAAGTTTGGAGCTAGCCTaGGGTTACAGTTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPSLELA*GYSFQG
Trigger: TCCCTGAAAACTGTAACCCCAGGCTAGCTCCAAACT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp CTACTGGGAAGCCTGAGGTTCTCAAGGTCATCAGGCTaGGTTTGGGGGCAGCACCCTCATGGCTGCATTGCT +
Preference number: 4 (lower is better)
Translates to: LLGSLRFSRSSG*VWGQHPHGCIA
Trigger: AGCAATGCAGCCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGAGAACCTCAGGCTTCCCAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCGCATTGCTGTTGTCATaGACACGTGAACACGCATGC +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATALLLS*TREHAC
Trigger: GCATGCGTGTTCACGTGTTCATGACAACAGCAATGC...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCTTGTGTGTCTTGGAATaGCAGCCTGTGCTAACAAAT +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPLCVLE*QPVLTN
Trigger: ATTTGTTAGCACAGGCTGTCATTCCAAGACACACAA...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATAGCTCTGACCTAGCTTaGCCCAGTGGTGAGATCAGT +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHSSDLA*PSGEIS
Trigger: ACTGATCTCACCACTGGGGCAAGCTAGGTCAGAGCT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCGGGATTACTTTAAAATaGCACTTTGCCGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPGITLK*HFAGDF
Trigger: GAAGTCTCCGGCAAAGTGGCATTTTAAAGTAATCCC...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATAATCAGCACTCCCGATaGCTGCGATCGGATCCGTCT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHNQHSR*LRSDPS
Trigger: AGACGGATCCGATCGCAGGCATCGGGAGTGCTGATT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGCATTCCCTCCACACATaGAGCCTCGTCCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKHSLHT*SLVHSV
Trigger: GACAGAGTGGACGAGGCTGCATGTGTGGAGGGAATG...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAATTCCTTCTCGTTTCTaGACCACAACCACTTGGATG +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPIPSRF*TTTTWM
Trigger: CATCCAAGTGGTTGTGGTCCAGAAACGAGAAGGAAT...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTTCTGGCCGCGGTTTTaGCTTTTCCAACCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHFWPRF*LFQPSI
Trigger: GATGGAGGGTTGGAAAAGCCAAAACCGCGGCCAGAA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGCCGGTAATTACATGTaGGCAGACTTAGCCAGAATA +
Preference number: 4 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPAGNYM*ADLARI
Trigger: TATTCTGGCTAAGTCTGCCCACATGTAATTACCGGC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTTGCTAAGACCAGATTaGTGTTGGGGTGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHLLRPD*CWGGQR
Trigger: CCTCTGCCCACCCCAACACCAATCTGGTCTTAGCAA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGGAGAAGCATCATTCTaGGCCAGTCACCCACTGGAC +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKGEASF*ASHPLD
Trigger: GTCCAGTGGGTGACTGGCCCAGAATGATGCTTCTCC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp CAGGCACTGTGTTTCTCCAGGCAGGCGGTAAGGCCTTaGACAGGGTTTCCAGGAAGACACATAGCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QALCFSRQAVRP*TGFPGRHIAAR
Trigger: TCTGGCTGCTATGTGTCTTCCTGGAAACCCTGTCAAAGGCCTTACCGCCTGCCTGGAGAAACACAGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCGCAGCCAGAGAGTTGTaGAGCCCCAACCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPAAREL*SPNPGS
Trigger: GGAGCCAGGGTTGGGGCTGCACAACTCTCTGGCTGC...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATGTCTGGGAGTCGAATTaGTGCGCGGAAATACTGAGA +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHVWESN*CAEILR
Trigger: TCTCAGTATTTCCGCGCACCAATTCGACTCCCAGAC...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATCAGGACCTGGGATTCTaGGCTGAGACAAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHQDLGF*AETKNS
Trigger: TGAGTTCTTTGTCTCAGCCCAGAATCCCAGGTCCTG...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATCATGGATCAGCGTTCTaGCCTGGTAGGCCCCTTATT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHHGSAF*PGRPLI
Trigger: AATAAGGGGCCTACCAGGCCAGAACGCTGATCCATG...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGAGGGCTGGAAGCACTaGTCTCCATGGATCAGCGTT +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLEGWKH*SPWISV
Trigger: AACGCTGATCCATGGAGACCAGTGCTTCCAGCCCTC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCAGTGGAAAAATAAATaGGTGATAATTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPQWKNK*VIICGE
Trigger: CTCCCCACAAATTATCACTCATTTATTTTTCCACTG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGAAGCTTGGGGTCACTaGGTGAGTTTGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLEAWGH*VSLDPP
Trigger: TGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCTTCAGTTTATTCAGGTaGTTGTTCACGAAAGTGATG +
Preference number: 4 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPFSLFR*LFTKVM
Trigger: CATCACTTTCGTGAACAAGCACCTGAATAAACTGAA...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCTTGTGGGGACTCTTTTaGCTAAGCTGGTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATLWGLF*LSWFPN
Trigger: ATTTGGGAACCAGCTTAGGCAAAAGAGTCCCCACAA...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGTTCAAGCAATACTTCTaGCTCAGCCCCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKFKQYF*LSPLSS
Trigger: GCTACTCAGGGGGCTGAGGCAGAAGTATTGCTTGAA...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGACCCCATCTGCAAACTaGGTTTCCAGTTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKTPSAN*VSSSVT
Trigger: GGTCACAGAACTGGAAACCCAGTTTGCAGATGGGGT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCCTCCGTGGTGCGCCCTaGAGTGGCAGGCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPLRGAP*SGRLLI
Trigger: AATGAGAAGCCTGCCACTCCAGGGCGCACCACGGAG...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATAATCCACATTCCACTTaGTGCTCCTGGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHNPHST*CSWEEV
Trigger: AACTTCCTCCCAGGAGCATCAAGTGGAATGTGGATT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGGGTTTCCAGTTCTGTaGCCTCCAGGTTCAGTTTAT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHGFPVL*PPGSVY
Trigger: ATAAACTGAACCTGGAGGTCACAGAACTGGAAACCC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATCGTTACGGTACTTGGTaGAGAGGTTGTACAACACTC +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHRYGTW*RGCTTL
Trigger: GAGTGTTGTACAACCTCTTCACCAAGTACCGTAACG...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGGGTGGGCAGAGGTCTaGTCTCCTCTCCTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCGWAEV*SPLLVS
Trigger: GGAGACCAGGAGAGGAGATCAGACCTCTGCCCACCC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCCAGGTACACCCCATCTaGAAACTGGGTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLQVHPI*KLGFQF
Trigger: GAACTGGAAACCCAGTTTGCAGATGGGGTGTACCTG...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCCCCTCATGGCTGCATTaGTGTTGTCATGAACACGTG +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLPSWLH*CCHEHV
Trigger: CACGTGTTCATGACAACAGCAATGCAGCCATGAGGG...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCTTTAAAATGCCACTTTaGCGGAGACTTCTCATGACC +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATFKMPL*RRLLMT
Trigger: GGTCATGAGAAGTCTCCGGCAAAGTGGCATTTTAAA...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCAGCACTCCCGATGCCTaGGATCGGATCCGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPSTPDA*DRIRLL
Trigger: GAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCACCCCCTGCCCCAAGTaGAGTGGATCAGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPTPCPK*SGSESS
Trigger: TGAGCTCTCTGATCCACTGCACTTGGGGCAGGGGGT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCCTGGTTCCCAAATCATaGAGGGAAATCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLLVPKS*REIWTW
Trigger: CCAGGTCCAGATTTCCCTCCATGATTTGGGAACCAG...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGGGTTCTCGTGTTTTTaGCTCAGGTGTACATGTGCA +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHGFSCF*LRCTCA
Trigger: TGCACATGTACACCTGAGCCAAAAACACGAGAACCC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGCAGAGATGGGCTTTGTaGAATGGGCCTAAAGTAGTG +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKQRWAL*NGPKVV
Trigger: CACTACTTTAGGCCCATTCCACAAAGCCCATCTCTG...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATTTCTCAAACCAGAGATaGGCTTTGTGGAATGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHFSNQR*ALWNGP
Trigger: AGGCCCATTCCACAAAGCCCATCTCTGGTTTGAGAA...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGATGGGTCAGCCCACTaGGTTATTGATGATTTCCTT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHDGSAH*VIDDFL
Trigger: AAGGAAATCATCAATAACTCAGTGGGCTGACCCATC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATAAGGTCTCAGTCAGTTaGTGGCTACAAGTGTTAAGT +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHKVSVS*WLQVLS
Trigger: ACTTAACACTTGTAGCCATCAACTGACTGAGACCTT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGTCAAGCCCACAGGCTaGATGGTGGGATTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIVKPTG*MVGFLL
Trigger: GAGCAGGAATCCCACCATTCAGCCTGTGGGCTTGAC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAGGGTTCAGGGGAGTTaGGGCAGGAACACAGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCRVQGS*GRNTGC
Trigger: GCAGCCTGTGTTCCTGCCTCAACTCCCCTGAACCCT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGTAACCCCTAAAGCCTaGATGAGAAAAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKVTPKA*MRKSFQ
Trigger: CTGGAAGCTTTTTCTCATTCAGGCTTTAGGGGTTAC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATGAGGGACATGACTCCTaGCACACACACACTATTAAT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHEGHDS*HTHTIN
Trigger: ATTAATAGTGTGTGTGTGGCAGGAGTCATGTCCCTC...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGACACCAACATATATTTaGCAAGGGCAGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKTPTYI*QGQALC
Trigger: ACACAGTGCCTGCCCTTGGCAAATATATGTTGGTGT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAGCACACCAAAGGGATaGTGGTCAGAAAGCCATTTA +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKSTPKG*WSESHL
Trigger: TAAATGGCTTTCTGACCAGCATCCCTTTGGTGTGCT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGGGGCGACTTGGGAGTaGGAGACTTGGGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCGATWE*ETWGQK
Trigger: CTTCTGTCCCCAAGTCTCCCACTCCCAAGTCGCCCC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGTTGACTATGTCTTCTaGCCGCGGTTTTGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLVDYVF*PRFWLF
Trigger: GAAAAGCCAAAACCGCGGCCAGAAGACATAGTCAAC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGCGAGCACTGCATTGCTaGCAGCTAGACTTTATAGTA +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKRALHC*QLDFIV
Trigger: TACTATAAAGTCTAGCTGCCAGCAATGCAGTGCTCG...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCCAGGTCTTCTTGTCTaGGGATCCTCCTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIPGLLV*GSSSVV
Trigger: CACCACGGAGGAGGATCCCCAGACAAGAAGACCTGG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGGGCCAGTCACCCACTaGACTGGTTTCCAACCAAGG +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIGPVTH*TGFQPR
Trigger: CCTTGGTTGGAAACCAGTCCAGTGGGTGACTGGCCC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp ATAGGTGGTGAGTCAGTCTACCTACCCTACCCGGCCTaGCAGCTTAATGCAGCTCTCTTGTTTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IGGESVYLPYPA*QLNAALLFSAA
Trigger: AGCTGCTGAAAACAAGAGAGCTGCATTAAGCTGCAAGGCCGGGTAGGGTAGGTAGACTGACTCACCACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp ATGAAAGCAATCTGGCAAAAGCCCTTGGTGGTGAGCTaGGTCTCCCTCACAGGCAATGACAGTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: MKAIWQKPLVVS*VSLTGNDSLGH
Trigger: ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTTTTGCCAGATTGCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGTCCCAAATGTCACCCTaGAACCAAAGTACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKSQMSP*NQSTEL
Trigger: TAACTCTGTACTTTGGTTTCAGGGTGACATTTGGGA...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCGACAGATACATCCTGTaGTCAAACAAGATTGGGACC +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLDRYIL*SNKIGT
Trigger: GGTCCCAATCTTGTTTGATCACAGGATGTATCTGTC...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGCAGCAATTGAAAATTaGAACCAACTCGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKAAIEN*NQLEAT
Trigger: TGTTGCCTCGAGTTGGTTGCAATTTTCAATTGCTGC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGATCCTCCTCCGTGGTaGGCCCTGGAGTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSDPPPW*ALEWQA
Trigger: AGCCTGCCACTCCAGGGCGCACCACGGAGGAGGATC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTGGAGGAGCTATGGGATaGCCAGAGGTTGCTAAGACC +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIGGAMG*PEVAKT
Trigger: GGTCTTAGCAACCTCTGGGCATCCCATAGCTCCTCC...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTCATGGAGGGAAATCTaGACCTGGCACCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCSWREI*TWHREG
Trigger: CCCTTCCCGGTGCCAGGTCCAGATTTCCCTCCATGA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATAGTGTGTGTAAGAAATaGATCAAAACAGTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHSVCKK*IKTVAS
Trigger: GGAGGCAACTGTTTTGATCCATTTCTTACACACACT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGACACCAAAGGGATGCTaGTCAGAAAGCCATTTAATC +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKTPKGC*SESHLI
Trigger: GATTAAATGGCTTTCTGACCAGCATCCCTTTGGTGT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGT +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIILGVTA*VWIHHC
Trigger: ACAATGGTGGATCCAAACTCACGCAGTGACCCCAAG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCTTCAAGGGTCCCTGTTaGAGAGCCCTACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPFKGPC*RALLPK
Trigger: CTTTGGAAGTAGGGCTCTTCAACAGGGACCCTTGAA...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGAAAAGAAAACCCAGTaGGCCTATGAAGTGTTGATT +
Preference number: 4 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKEKKTQ*AYEVLI
Trigger: AATCAACACTTCATAGGCTCACTGGGTTTTCTTTTC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAACAGAAGGCGACTTCTaGGGGGAGGTGGCCATGGCG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSTEGDF*GEVAMA
Trigger: CGCCATGGCCACCTCCCCGCAGAAGTCGCCTTCTGT...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCAAACCTTCATCAATCTaGATACAATTCACCATAAGG +
Preference number: 4 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATKPSSI*IQFTIR
Trigger: CCTTATGGTGAATTGTATGCAGATTGATGAAGGTTT...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAGAGAATGCACCCCCTaGCCCAAGTGCAGTGGATCA +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCRECTP*PKCSGS
Trigger: TGATCCACTGCACTTGGGGCAGGGGGTGCATTCTCT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATAACACACAATTCCAATaGAGCCTAGGAGGACATTAT +
Preference number: 4 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHNTQFQ*SLGGHY
Trigger: ATAATGTCCTCCTAGGCTGCATTGGAATTGTGTGTT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCAAATCTGCAAGTATTTaGGAAGCTGATGTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLKSASI*EADVWR
Trigger: CCTCCACACATCAGCTTCCCAAATACTTGCAGATTT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGGGGCAGCACCCTCATaGCTGCATTGCTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCGAAPS*LHCCCH
Trigger: ATGACAACAGCAATGCAGCCATGAGGGTGCTGCCCC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTGGCAGGCTTCTCATTaGAGTAGCTCCACGACTGAG +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIWQASH*SSSTTE
Trigger: CTCAGTCGTGGAGCTACTCCAATGAGAAGCCTGCCA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp ATTTCAGTTTCCACTATCTCTGGGTTGCAGCTGGACTaGTGGGAGAGCACAGTGCAAGAGACAGGAATAAGC +
Preference number: 4 (lower is better)
Translates to: ISVSTISGLQLD*WESTVQETGIS
Trigger: GCTTATTCCTGTCTCTTGCACTGTGCTCTCCCACAAGTCCAGCTGCAACCCAGAGATAGTGGAAACTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp CTACCCTACCCGGCCTTGCAGCTTAATGCAGCTCTCTaGTTTTCAGCAGCTGCAGCAATTCTCTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: LPYPALQLNAAL*FSAAAAILLDF
Trigger: AAAATCCAAGAGAATTGCTGCAGCTGCTGAAAACAAGAGAGCTGCATTAAGCTGCAAGGCCGGGTAGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp CTGTCTCCCCTGCTAGCTATAATCTCTCACTCACCCTaGGACATGCTGCACTCAACACATACTTGCCGAATA +
Preference number: 4 (lower is better)
Translates to: LSPLLAIISHSP*DMLHSTHTCRI
Trigger: TATTCGGCAAGTATGTGTTGAGTGCAGCATGTCCAAGGGTGAGTGAGAGATTATAGCTAGCAGGGGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp TTCCAGGAGCTGTTTTTCAGATACACCAACATATATTaGCCAAGGGCAGGCACTGTGTTTCTCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQELFFRYTNIY*PRAGTVFLQAG
Trigger: GCCTGCCTGGAGAAACACAGTGCCTGCCCTTGGCAAATATATGTTGGTGTATCTGAAAAACAGCTCCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTACCTTCATCAGTTCTTaGAGCTTGGGGTCACTGCGT +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIITFISS*SLGSLR
Trigger: ACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCACCCTTGGACATGCTaGACTCAACACATACTTGCC +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIHPWTC*TQHILA
Trigger: GGCAAGTATGTGTTGAGTGCAGCATGTCCAAGGGTG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCTGCTCAGGGGTCGGTaGCCATATCATTCAAGGATC +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCLLRGR*PYHSRI
Trigger: GATCCTTGAATGATATGGGCACCGACCCCTGAGCAG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGGTGCGCGGAAATACTaGGACAGAGCAACGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSGARKY*DRATSR
Trigger: CCTGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCAATTTTTGGGGGAAATaGCACGCAATCTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLNFWGK*HAILEL
Trigger: TAATTCCAAGATTGCGTGTCATTTCCCCCAAAAATT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTGGGAGTCGAATTGGTaGGCGGAAATACTGAGACAG +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCWESNW*AEILRQ
Trigger: CTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCCCAGCTCTCTGCGGTaGCTGAGCATATTGTACATT +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCPSSLR*LSILYI
Trigger: AATGTACAATATGCTCAGGCACCGCAGAGAGCTGGG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCACTTGGATGGAAACATaGTCTGGGAGTCGAATTGGT +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPTWMET*SGSRIG
Trigger: ACCAATTCGACTCCCAGACCATGTTTCCATCCAAGT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACTGGAGGAGGGTACTTaGGCTGGTGTCTACCTGGCA +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSLEEGT*AGVYLA
Trigger: TGCCAGGTAGACACCAGCCCAAGTACCCTCCTCCAG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp ATGTATTATTCCACATCCAGGAGGCTTGCTTATAGTTaGTCAAGCCCACAGGCTGAATGGTGGGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: MYYSTSRRLAYS*SSPQAEWWDSC
Trigger: GCAGGAATCCCACCATTCAGCCTGTGGGCTTGACAAACTATAAGCAAGCCTCCTGGATGTGGAATAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTGCAGTTTTTGCTTCTaGGCAATCTCTGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCCSFCF*AISDWV
Trigger: CACCCAGTCAGAGATTGCTCAGAAGCAAAAACTGCA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATTCATTCCCTCCTCCTaGAGCTCGGACACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSFIPSS*SSDTSL
Trigger: CAAGGAGGTGTCCGAGCTGCAGGAGGAGGGAATGAA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTCCAACCCTCCATCTTaGATGAGCTCAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCSNPPS*MSSKAK
Trigger: CTTTGCCTTTGAGCTCATGCAAGATGGAGGGTTGGA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTACTCACCCTTGGACATaGTGCACTCAACACATACTT +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIITHPWT*CTQHIL
Trigger: AAGTATGTGTTGAGTGCAGCATGTCCAAGGGTGAGT...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCAGTATCAAAGCCAGTaGCCACATGTGTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIQYQSQ*PHVCRK
Trigger: CTTTCTACACACATGTGGGCACTGGCTTTGATACTG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCCAGGACTTAGCAGGCTaGCACACTAGAGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFQDLAG*HTRALS
Trigger: AGACAGAGCTCTAGTGTGCCAGCCTGCTAAGTCCTG...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCTAGCTCGAGCAGACTaGAGATACGCATTTGGATTT +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIILARAD*RYAFGF
Trigger: AAATCCAAATGCGTATCTCCAGTCTGCTCGAGCTAG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp AGTTCACATAGAGGAGATACAAGTAACCACAAGCCCTaGAGTAACCCACGCAAAGAAACTGCTTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSHRGDTSNHKP*SNPRKETAWLW
Trigger: CCAAAGCCAAGCAGTTTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTACTTGTATCTCCTCTATGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCTGGCTTTGGTCTAAATaGCTTACATTTTTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPWLWSK*LTFFLA
Trigger: AGCGAGGAAAAATGTAAGTCATTTAGACCAAAGCCA...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTGCACACGTTCACATATaGGACCACCACTGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCAHVHI*DHHCSK
Trigger: TTTACTACAGTGGTGGTCGCATATGTGAACGTGTGC...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTTCTGAATTTCCCAAGTaGCCTTCCAAATGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIISEFPK*PSKCQY
Trigger: ATACTGGCATTTGGAAGGGCACTTGGGAAATTCAGA...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGTGATCAAACAAGATTaGGACCCATCGTACCCCGTC +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFVIKQD*DPSYPV
Trigger: GACGGGGTACGATGGGTCCCAATCTTGTTTGATCAC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAAGACCAGATTGGTGTTaGGGTGGGCAGAGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSRPDWC*GGQRSD
Trigger: ATCAGACCTCTGCCCACCCCAACACCAATCTGGTCT...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGTAACCACAAGCCCTTaGGTAACCCACGCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFVTTSP*VTHAKK
Trigger: TTTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTAC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACAAGTATTTGGGAAGCTaGTGTGTGGAGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNKYLGS*CVEAGP
Trigger: GGGACCTGCCTCCACACATCAGCTTCCCAAATACTT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATTATGTAGGGGACTCTaGGGTGCGCTCCAACTAGAA +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSLCRGL*GALQLE
Trigger: TTCTAGTTGGAGCGCACCTCAGAGTCCCCTACATAA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACAGACTCCATATTGCTaGCGTAGCTTTCCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSQTPYC*RSFPQS
Trigger: ACTCTGGGGAAAGCTACGTCAGCAATATGGAGTCTG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCATAGTCTCAATCTCCTaGCCTTGTGATCTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFIVSIS*PCDLSV
Trigger: GACGGACAGATCACAAGGTCAGGAGATTGAGACTAT...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GAGTCAAGTTACATGCAAATTTTCAGCTGCTCAGGGGTCGGTGCCCATATCATTCCTCTTACTTCATCCTaGTTCAGTATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: ESSYMQIFSCSGVGAHIIPLTSS*FSIAQE
Trigger: TTCTTGAGCAATACTGAAGCAGGATGAAGTAAGAGG...AATGATATGGGCACCGACCCCTGAGCAGCTGAAAATTTGCATGTAACTTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATGTCATCTCTGTGCCTaGACATGTGAAACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSCHLCA*TCETGA
Trigger: GGCTCCAGTTTCACATGTGCAGGCACAGAGATGACA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCAGTTTCCACTATCTCTaGGTTGCAGCTGGACTTGTG +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFSFHYL*VAAGLV
Trigger: CACAAGTCCAGCTGCAACCCAGAGATAGTGGAAACT...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACCCCCAGCCAGGACCATaGTATGACATGAGAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNPQPGP*YDMRKA
Trigger: TGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGG...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCTAGGTCTTTCACAATaGTTCTTTCTCCAACCAACA +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCLGLSQ*FFLQPT
Trigger: TGTTGGTTGGAGAAAGAATCATTGTGAAAGACCTAG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAACCCAGTGAGCCTATaGAGTGTTGATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCNPVSL*SVDSHF
Trigger: AAAATGAGAATCAACACTTCATAGGCTCACTGGGTT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACTGTGCCTGCACATGTaGAACTGGAGCCTTCTAATA +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSLCLHM*NWSLLI
Trigger: TATTAGAAGGCTCCAGTTTCACATGTGCAGGCACAG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCTTGTTTTCAGCAGCTaGAGCAATTCTCTTGGATTT +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCLVFSS*SNSLGF
Trigger: AAATCCAAGAGAATTGCTGCAGCTGCTGAAAACAAG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACTGGCCACCAGGCTCTTaGCATGAACAGAATCCACAT +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNWPPGS*HEQNPH
Trigger: ATGTGGATTCTGTTCATGCCAAGAGCCTGGTGGCCA...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACCAGTTATTTCCTCTTaGATTTGCCGAGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSPVISS*ICRDWR
Trigger: CCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTTTAGACTCTACTTTTaGAATCATTGTCTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCFRLYF*NHCLGS
Trigger: GCTGCCTAGACAATGATTTCAAAAGTAGAGTCTAAA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGCACTGGACTATGGATaGTTCCTATTTGAACCACAA +
Preference number: 4 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFALDYG*FLFEPQ
Trigger: TTGTGGTTCAAATAGGAATCATCCATAGTCCAGTGC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACTCAGTTCTTGAAGCTTaGGGTCACTGCGTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNSVLEA*GHCVSL
Trigger: CAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGA...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR TCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGTTTCAGGGTTTCATTaGTCTTCTCCAGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNVSGFH*SSPGQS
Trigger: AGACTGTCCTGGAGAAGATCAATGAAACCCTGAAAC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGGGAGTCAAGTTACATaGAAATTTTCAGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSGSQVT*KFSAAQ
Trigger: CTGAGCAGCTGAAAATTTGCATGTAACTTGACTCCC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGTAAGATTCCTGAGGTaGAGCTCTATTAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNVRFLR*SSIKGS
Trigger: GCTGCCTTTAATAGAGCTCCACCTCAGGAATCTTAC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACACTGTAGTAAAGCATaGGCTATAAGCAGAGTTTGG +
Preference number: 4 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSHCSKA*AISRVW
Trigger: CCAAACTCTGCTTATAGCCCATGCTTTACTACAGTG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CCA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAGATTTTATATAATGTaGTGGGCATTGGAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCRFYIM*WALEQL
Trigger: TAACTGCTCCAATGCCCACCACATTATATAAAATCT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
3UTR CAA 72 bp GCCCAGCTCTCTGCGGTGCCTGAGCATATTGTACATTaGCTTAACGATAATGAATTTAGTACTTATTTTGCA +
Preference number: 4 (lower is better)
Translates to: AQLSAVPEHIVH*LNDNEFSTYFA
Trigger: TGCAAAATAAGTACTAAATTCATTATCGTTAAGCAAATGTACAATATGCTCAGGCACCGCAGAGAGCTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR GCA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACTTCTCGAAAAGCTTCTaGAGGACTTGTCCATCATAC +
Preference number: 4 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNFSKSF*RTCPSY
Trigger: GTATGATGGACAAGTCCTGCAGAAGCTTTTCGAGAA...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATCGGGACGGGGGCGACTaGGGAGTGGGAGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHRDGGD*GVGDLG
Trigger: CCCCAAGTCTCCCACTCCCAAGTCGCCCCCGTCCCG...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp AAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAACTCTTaGGCAGTGGTGGGCCCAGGGCAGCCCCTCACTCCACGTTACGGT +
Preference number: 5 (lower is better)
Translates to: KAVRRRVQYANSKNS*AVVGPGQPLTPRYG
Trigger: ACCGTAACGTGGAGTGAGGGGCTGCCCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCATCAGGCTTGGTTaGGGGGCAGCACCCTCATGG +
Preference number: 5 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPVIRLG*GAAPSW
Trigger: CCATGAGGGTGCTGCCCCCAAACCAAGCCTGATGAC...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp TTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAACTCTTGGGCAGTaGTGGGCCCAGGGCAGCCCCTCACTCCACGTTACGGTACTTGGT +
Preference number: 5 (lower is better)
Translates to: FGGGSSTPTARTLGQ*WAQGSPSLHVTVLG
Trigger: ACCAAGTACCGTAACGTGGAGTGAGGGGCTGCCCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTTGGCGTACTGGACCCTCCTCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp CAGCTCGGACACTGGTCCCTGTCATGCAGGCCAGCAAACAGCAGCTaGTCTTCCTCCGCAGCCTGGTTGGGGTGTTGTTCTCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: QLGHWSLSCRPANSS*SSSAAWLGCCSQGV
Trigger: CACTCCCTGAGAACAACACCCCAACCAGGCTGCGGAGGAAGACCAGCTGCTGTTTGCTGGCCTGCATGACAGGGACCAGTGTCCGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS-3UTR CAA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACCTTCCCAACCTTCATaGCTAGGTTGGTCCCCAGCG +
Preference number: 5 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPPSQPS*LGWSPA
Trigger: CGCTGGGGACCAACCTAGCAATGAAGGTTGGGAAGG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCACTTCTGGCCGCGGTTTaGGCTTTTCCAACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPLLAAV*AFPTLH
Trigger: ATGGAGGGTTGGAAAAGCCAAAACCGCGGCCAGAAG...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCCAACAGCAAGAACTCTaGGGCAGTGGTGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATQQQEL*GSGGPR
Trigger: CCTGGGCCCACCACTGCCCAAGAGTTCTTGCTGTTG...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTCTGGAGGAGGGTACTaGGGCTGGTGTCTACCTGGC +
Preference number: 5 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHSGGGY*GWCLPG
Trigger: GCCAGGTAGACACCAGCCCAAGTACCCTCCTCCAGA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp TACATGGATGGCAAGGGGGAAAGCCCTGTGTGTGCAGAGGTTAGGTaGTGCCACCAGTTCTGGCAGGAAGCTCGCAAGCTGCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: YMDGKGESPVCAEVR*CHQFWQEARKLQGW
Trigger: CCATCCCTGCAGCTTGCGAGCTTCCTGCCAGAACTGGTGGCATCACCTAACCTCTGCACACACAGGGCTTTCCCCCTTGCCATCCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 90 bp ACACTTGAGGGCAAAGTGCCCCGCAGCCCATGGTCTAGGATTTCATaGCAATCATGGCATCTTCTGCCCAGAGCTGACCCCCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: TLEGKVPRSPWSRIS*QSWHLLPRADPLPV
Trigger: CACAGGGAGGGGGTCAGCTCTGGGCAGAAGATGCCATGATTGCCATGAAATCCTAGACCATGGGCTGCGGGGCACTTTGCCCTCAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATTCAAGGTCATCAGGCTaGGTTTGGGGGCAGCACCCT +
Preference number: 5 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHSRSSG*VWGQHP
Trigger: AGGGTGCTGCCCCCAAACCAAGCCTGATGACCTTGA...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGGGTTGCAGCTGGACTaGTGGGAGAGCACAGTGCAA +
Preference number: 5 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKGLQLD*WESTVQ
Trigger: TTGCACTGTGCTCTCCCACAAGTCCAGCTGCAACCC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCCAGGCAATGACAGTCTaGGCCATGGGTCTAGACAAC +
Preference number: 5 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATQAMTV*AMGLDN
Trigger: GTTGTCTAGACCCATGGCCAAGACTGTCATTGCCTG...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATATCTGGCAAAAGCCCTaGGTGGTGAGCTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHIWQKP*VVSLVS
Trigger: GGAGACCAAGCTCACCACCAAGGGCTTTTGCCAGAT...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCAGTCACCCCTACTTTTGAAATCATaGTCTAGGCAGCCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLSPGGPPRRSIILGQSPLLLKS*SRQPFL
Trigger: GAGGAAAGGCTGCCTAGACAATGATTTCAAAAGTAG...GGGTGACTGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCTGTGATCAAACAAGATaGGGACCCATCGTACCCCGT +
Preference number: 5 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATCDQTR*GPIVPR
Trigger: ACGGGGTACGATGGGTCCCAATCTTGTTTGATCACA...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 90 bp CAGAGGTTAGGTGATGCCACCAGTTCTGGCAGGAAGCTCGCAAGCTaGAGGGATGGGTTTTCCCAATGTTCTGTTGCATCTCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QRLGDATSSGRKLAS*RDGFSQCSVASRFP
Trigger: AGGGAAGCGAGATGCAACAGAACATTGGGAAAACCCATCCCTGCAGCTTGCGAGCTTCCTGCCAGAACTGGTGGCATCACCTAACCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 90 bp CATGGCAATCATGGCATCTTCTGCCCAGAGCTGACCCCCTCCCTGTaGTTTCTACCCTTCTGCTTTCAGACCAACTGGAGGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: HGNHGIFCPELTPSL*FLPFCFQTNWRSVK
Trigger: CTTCACAGACCTCCAGTTGGTCTGAAAGCAGAAGGGTAGAAACCACAGGGAGGGGGTCAGCTCTGGGCAGAAGATGCCATGATTGCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CCA 90 bp GGAAAAGGCCCAGGTGCAACATCCAGTGAGGAACAGACAGGTACATaGATGGCAAGGGGGAAAGCCCTGTGTGTGCAGAGGTTAGGTGAT +
Preference number: 5 (lower is better)
Translates to: GKGPGATSSEEQTGT*MARGKALCVQRLGD
Trigger: ATCACCTAACCTCTGCACACACAGGGCTTTCCCCCTTGCCATCCATGTACCTGTCTGTTCCTCACTGGATGTTGCACCTGGGCCTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCGGGAGCCAGGTCTTCTaGTCTGGGGATCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPGSQVF*SGDPPP
Trigger: CGGAGGAGGATCCCCAGACAAGAAGACCTGGCTCCC...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCAGGCTTGCTTATAGTTaGTCAAGCCCACAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATRLAYS*SSPQAE
Trigger: TTCAGCCTGTGGGCTTGACAAACTATAAGCAAGCCT...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp CTGCTGGAGGAGTTAAAAGCTGTAGTCACTGGGACAGATGCGTGGTaGGGCTCCCGGCTTAGCCATGTCTTCATGTGCCGAAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLEELKAVVTGTDAW*GSRLSHVFMCRSFF
Trigger: GAAAAAGCTTCGGCACATGAAGACATGGCTAAGCCGGGAGCCTCACCACGCATCTGTCCCAGTGACTACAGCTTTTAACTCCTCCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCACCTTCATTGCTAGGTaGGTCCCCAGCGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPTFIAR*VPSAWE
Trigger: CTCCCAGGCGCTGGGGACCAACCTAGCAATGAAGGT...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp ACACAGGCTGCTCAGCCCAGGGGGTCCACCGAGGAGAAGCATCATTCTGGGCCATTCTTGATTCCTCTTTaGCCTTTCAAAGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: TQAAQPRGSTEEKHHSGPFLIPL*PFKVMV
Trigger: GACCATGACTTTGAAAGGCAAAAGAGGAATCAAGAA...TGGCCCAGAATGATGCTTCTCCTCGGTGGACCCCCTGGGCTGAGCAGCCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GGTAAAACAGGAGTCCTCCTCCGAGGTGAGAGGGCTGGAAGCACTGGTCTCCATCTTAATGCAGCTCTCTaGTTTTCAGCAGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GKTGVLLRGERAGSTGLHLNAAL*FSAAAA
Trigger: TGCTGCAGCTGCTGAAAACAAGAGAGCTGCATTAAG...ATGGAGACCAGTGCTTCCAGCCCTCTCACCTCGGAGGAGGACTCCTGTTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATATCTCTCACTCACCCTaGGACATGCTGCACTCAACA +
Preference number: 5 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHISHSP*DMLHST
Trigger: TGTTGAGTGCAGCATGTCCAAGGGTGAGTGAGAGAT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCTACCTTCATCAGTTCTaGAAGCTTGGGGTCACTGCG +
Preference number: 5 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLYLHQF*KLGVTA
Trigger: CGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGTA...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp CTGGTCTCCTCCGCTCCCCAGCCAGGACCATGGTATGACATGAGAAAGGCAACCAAGCTTCTGCAGGACTaGTCCATCATACAAATCTTC +
Preference number: 5 (lower is better)
Translates to: LVSSAPQPGPWYDMRKATKLLQD*SIIQIF
Trigger: GAAGATTTGTATGATGGACAAGTCCTGCAGAAGCTT...GGTTGCCTTTCTCATGTCATACCATGGTCCTGGCTGGGGAGCGGAGGAGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAACCAGAGATGGGCTTaGTGGAATGGGCCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKNQRWA*WNGPKV
Trigger: TACTTTAGGCCCATTCCACAAAGCCCATCTCTGGTT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp GTGTCAGGCACTATCCTAAGCACTTTACACGTATTACTACACGGATaGGCCACATGTGTGGGTGAGACCAAGGAGACAGCTGGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: VSGTILSTLHVLLHG*ATCVGETKETAGGH
Trigger: ATGACCCCCAGCTGTCTCCTTGGTCTCACCCACACATGTGGCTCATCCGTGTAGTAATACGTGTAAAGTGCTTAGGATAGTGCCTGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CCA 90 bp TCCTTCTCGTTTCTGGACCACAACCACTTGGATGGAAACATGGTCTaGGAGTCGAATTGGTGCGCGGAAATACTGAGACAGAGCAACGAG +
Preference number: 5 (lower is better)
Translates to: SFSFLDHNHLDGNMV*ESNWCAEILRQSNE
Trigger: CTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTGGTTGTGGTCCAGAAACGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS-3UTR CAA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCTATTTCCTCTTGGATTaGCCGAGACTGGAGGATTCC +
Preference number: 5 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLYFLLD*PRLEDS
Trigger: GGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATA...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCACCAGTTATTTCCTCTaGGATTTGCCGAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLTSYFL*DLPRLE
Trigger: CTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGT...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGATAGGAGGCCTAACTTaGGGTGGTGTAGATACAGAT +
Preference number: 5 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKIGGLT*GGVDTD
Trigger: ATCTGTATCTACACCACCCAAAGTTAGGCCTCCTAT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCTTCCTGCTCCTGCCGTaGGTAAAACAGGAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPFLLLP*VKQESS
Trigger: GGAGGACTCCTGTTTTACCAACGGCAGGAGCAGGAA...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp AAGCACTTTACACGTATTACTACACGGATGAGCCACATGTGTGGGTaGGACCAAGGAGACAGCTGGGGGTCATCGGATGATGGAATGCTT +
Preference number: 5 (lower is better)
Translates to: KHFTRITTRMSHMCG*DQGDSWGSSDDGML
Trigger: AAGCATTCCATCATCCGATGACCCCCAGCTGTCTCCTTGGTCTCACCCACACATGTGGCTCATCCGTGTAGTAATACGTGTAAAGTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS GCA 90 bp CTCCCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTTGGATTTaGCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACAACCACT +
Preference number: 5 (lower is better)
Translates to: LPERASVLPVISSWI*RDWRIPSRFWTTTT
Trigger: AGTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS GCA 90 bp GAAGCTATAGGATCTTCTCAAATGCTTCCCGAAGAGAATGCCTCCTaGTCGGCACAACTCTCAGCTCAGTGCGTCAGTTGCAAACAAGTG +
Preference number: 5 (lower is better)
Translates to: EAIGSSQMLPEENAS*SAQLSAQCVSCKQV
Trigger: CACTTGTTTGCAACTGACGCACTGAGCTGAGAGTTGTGCCGAGCAGGAGGCATTCTCTTCGGGAAGCATTTGAGAAGATCCTATAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CCA 90 bp TCATGCCTCCCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTTaGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: SCLPERASVLPVISS*ICRDWRIPSRFWTT
Trigger: TGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGGGAGGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCGGTCACTGCGTGAGTTaGGATCCACCATTGTTCGCA +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPGHCVS*DPPLFA
Trigger: TGCGAACAATGGTGGATCCAAACTCACGCAGTGACC...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCTTCACCACATTCAGCTaGTCTGGGGCATGGTCGAAC +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPFTTFS*SGAWSN
Trigger: GTTCGACCATGCCCCAGACAAGCTGAATGTGGTGAA...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGGATCTCAAATTAGTTTaGATCAGCCTCCACTTAGGC +
Preference number: 5 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKDLKLV*ISLHLG
Trigger: GCCTAAGTGGAGGCTGATCAAAACTAATTTGAGATC...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATACTGGGCAGGTCCACTaGTTCATGGATTTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHTGQVH*FMDFCF
Trigger: AAAACAAAAATCCATGAACAAGTGGACCTGCCCAGT...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp TGTCTTCTGGCCGCGGTTTTGGCTTTTCCAACCCTCCATCTTGCATaGGCTCAAAGGCAAAGGAGACATTCAAGACCTTCTGTTCAAAGC +
Preference number: 5 (lower is better)
Translates to: CLLAAVLAFPTLHLA*AQRQRRHSRPSVQS
Trigger: GCTTTGAACAGAAGGTCTTGAATGTCTCCTTTGCCTTTGAGCTCATGCAAGATGGAGGGTTGGAAAAGCCAAAACCGCGGCCAGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp GTGAGACTCTATCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGTTCGCACCTCATTCTCCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: VRLYLHQFLKLGVTA*VWIHHCSHLILLQH
Trigger: ATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATAGAGTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526746.5
CDS GCA 90 bp CTCGGCACAACTCTCAGCTCAGTGCGTCAGTTGCAAACAAGTGGCTaGCTATATAATTTAATACGATGCCACTGGAGACTCACAGACCTG +
Preference number: 5 (lower is better)
Translates to: LGTTLSSVRQLQTSG*LYNLIRCHWRLTDL
Trigger: CAGGTCTGTGAGTCTCCAGTGGCATCGTATTAAATTATATAGGCAGCCACTTGTTTGCAACTGACGCACTGAGCTGAGAGTTGTGCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS GCA 90 bp CAGAGTGAGACTCTATCTTCATCAGTTCTTGAAGCTTGGGGTCACTaGGTGAGTTTGGATCCACCATTGTTCGCACCTCATTCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: QSETLSSSVLEAWGH*VSLDPPLFAPHSPP
Trigger: TGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATAGAGTCTCACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526746.5
CDS CCA 90 bp AAAGTGATGAGTGTCTTTTTCACCACATTCAGCTTGTCTGGGGCATaGTCGAACAAGGTGTCAAAGGCATCACGTTCATGCCTCCCGGAA +
Preference number: 5 (lower is better)
Translates to: KVMSVFFTTFSLSGA*SNKVSKASRSCLPE
Trigger: TTCCGGGAGGCATGAACGTGATGCCTTTGACACCTTGTTCGACCATGCCCCAGACAAGCTGAATGTGGTGAAAAAGACACTCATCACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp GTGGGGTTGCATAGATGTGATGCTGGATGGTTTTGTAACCATTCCTaGAGGCAAGATTCCTCCACAACCATGTTCCATTACTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: VGLHRCDAGWFCNHS*RQDSSTTMFHYSVA
Trigger: GGCCACAGAGTAATGGAACATGGTTGTGGAGGAATCTTGCCTCCAGGAATGGTTACAAAACCATCCAGCATCACATCTATGCAACCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAAGCTCGGACACCTCCTaGGCTTTCTTCCTCCGGGCC +
Preference number: 5 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSSSDTS*AFFLRA
Trigger: GGCCCGGAGGAAGAAAGCCAAGGAGGTGTCCGAGCT...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAGCCCTTGGTGGTGAGCTTGGTCTCCCTCACAGGCAATGACAGTCTTGGCCATCAGCCCACTGAGTTATaGATGATTTCCTTCCTAATT +
Preference number: 5 (lower is better)
Translates to: KPLVVSLVSLTGNDSLGHQPTEL*MISFLI
Trigger: AATTAGGAAGGAAATCATCAATAACTCAGTGGGCTG...ATGGCCAAGACTGTCATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AGGAATAAGCAGGGTAAGGCAGTTCGGAGGAGGGTCCAGTACGCCAACAGCAAGAGCTCCAGAATACTGTaGATGCAAATAAGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RNKQGKAVRRRVQYANSKSSRIL*MQISFK
Trigger: CTTGAAGCTTATTTGCATCAACAGTATTCTGGAGCT...CTTGCTGTTGGCGTACTGGACCCTCCTCCGAACTGCCTTACCCTGCTTATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp AAAGGAGAAAAATCAGCACTCCCGATGCCTGCGATCGGATCCGTCTTCTCCCTCTTGAACAACAATGATTaGAACTGGGCAGGTCCACTT +
Preference number: 5 (lower is better)
Translates to: KGEKSALPMPAIGSVFSLLNNND*NWAGPL
Trigger: AAGTGGACCTGCCCAGTTCAAATCATTGTTGTTCAA...GAGGGAGAAGACGGATCCGATCGCAGGCATCGGGAGTGCTGATTTTTCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS TCA 90 bp GCAAACTGGTTCCCTCCACCTGAGTATCCTACCCATTATGGGCTTTaGATGTGTATGCCCTGCCTCAGACCTTTGAGATTAGGGTCTAAA +
Preference number: 5 (lower is better)
Translates to: ANWFPPPEYPTHYGL*MCMPCLRPLRLGSK
Trigger: TTTAGACCCTAATCTCAAAGGTCTGAGGCAGGGCATACACATTCAAAGCCCATAATGGGTAGGATACTCAGGTGGAGGGAACCAGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS TCA 90 bp GGTTTCATTGATCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGTTCGCACCTCATTCTCCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: GFIDLHQFLKLGVTA*VWIHHCSHLILLQH
Trigger: ATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATCAATGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533392.1
CDS GCA 90 bp ACTATGTCTTCTGGCCGCGGTTTTGGCTTTTCCAACCCTCCATCTTaGATGAGCTCAAAGGCAAAGGAGACATTCAAGACCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: TMSSGRGFGFSNPPS*MSSKAKETFKTFCS
Trigger: TGAACAGAAGGTCTTGAATGTCTCCTTTGCCTTTGAGCTCATGCAAGATGGAGGGTTGGAAAAGCCAAAACCGCGGCCAGAAGACATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp GTTCACGAAAGTGATGAGTGTCTTTTTCACCACATTCAGCTTGTCTaGGGCATGGTCGAACAAGGTGTCAAAGGCATCACGTTCATGCCT +
Preference number: 5 (lower is better)
Translates to: VHESDECLFHHIQLV*GMVEQGVKGITFMP
Trigger: AGGCATGAACGTGATGCCTTTGACACCTTGTTCGACCATGCCCCAGACAAGCTGAATGTGGTGAAAAAGACACTCATCACTTTCGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 90 bp CAGTTGCAAACAAGTGGCTGCCTATATAATTTAATACGATGCCACTaGAGACTCACAGACCTGCTGCAAAGCAAGCGGGATTCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: QLQTSGCLYNLIRCH*RLTDLLQSKRDSAS
Trigger: AGAGGCAGAATCCCGCTTGCTTTGCAGCAGGTCTGTGAGTCTCCAGTGGCATCGTATTAAATTATATAGGCAGCCACTTGTTTGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGGGCTGAGGGGCAGGTaGATGGCGTTCATTCCCTCC +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNGLRGR*MAFIPS
Trigger: GGAGGGAATGAACGCCATCAACCTGCCCCTCAGCCC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCAGAGGGTTCAGGGGAGTaGAGGCAGGAACACAGGCTG +
Preference number: 5 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSEGSGE*RQEHRL
Trigger: CAGCCTGTGTTCCTGCCTCAACTCCCCTGAACCCTC...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCTACACCAACATATATTaGCCAAGGGCAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPYTNIY*PRAGTV
Trigger: CACAGTGCCTGCCCTTGGCAAATATATGTTGGTGTA...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCCCCTTGGTGGTGAGCTaGGTCTCCCTCACAGGCAAT +
Preference number: 5 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFPLVVS*VSLTGN
Trigger: ATTGCCTGTGAGGGAGACCAAGCTCACCACCAAGGG...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 90 bp TCCAGTCAATTAATACCTTCATCAGTTCTTGAAGCTTGGGGTCACTaGGTGAGTTTGGATCCACCATTGTTCGCACCTCATTCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSQLIPSSVLEAWGH*VSLDPPLFAPHSPP
Trigger: TGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGTATTAATTGACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
CDS-3UTR CAA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTTGGGTTCTCGTGTTTTaGGCTCAGGTGTACATGTGC +
Preference number: 5 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCWVLVF*AQVYMC
Trigger: GCACATGTACACCTGAGCCAAAAACACGAGAACCCA...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 90 bp ATGGTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTTGGATTTaGCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACAACCACT +
Preference number: 5 (lower is better)
Translates to: MVLTYSVLPVISSWI*RDWRIPSRFWTTTT
Trigger: AGTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 90 bp TGCTGGAGAAGCCTGGATAAATATATAGGACATGGCTCGTGCCCTTaGGAAGCCTATACACATTTACCTAAACAGCTACAGATGACATGG +
Preference number: 5 (lower is better)
Translates to: CWRSLDKYIGHGSCP*EAYTHLPKQLQMTW
Trigger: CCATGTCATCTGTAGCTGTTTAGGTAAATGTGTATAGGCTTCCCAAGGGCACGAGCCATGTCCTATATATTTATCCAGGCTTCTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS-3UTR CAA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTAGTTTGGATCCACCATaGTTCGCACCTCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCSLDPP*FAPHSP
Trigger: AGGAGAATGAGGTGCGAACAATGGTGGATCCAAACT...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 90 bp AACACACATCCATTGCAGCACTCAACTCTCCTACCGAAAAGCTTCTaGAGGACTTGTCCATCATACAAATCTTCAGCTAGGTCTTTCACA +
Preference number: 5 (lower is better)
Translates to: NTHPLQHSTLLPKSF*RTCPSYKSSARSFT
Trigger: TGTGAAAGACCTAGCTGAAGATTTGTATGATGGACAAGTCCTGCAGAAGCTTTTCGGTAGGAGAGTTGAGTGCTGCAATGGATGTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CCA 90 bp ACGTTAATGGTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTTaGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACA +
Preference number: 5 (lower is better)
Translates to: TLMVLTYSVLPVISS*ICRDWRIPSRFWTT
Trigger: TGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACACCATTAACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACAAGGAATCATCTTTCTaGCGGGACGGGGGCGACTTG +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNKESSF*RDGGDL
Trigger: CAAGTCGCCCCCGTCCCGCAAGAAAGATGATTCCTT...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGGTCTGGGAGTCGAATaGGTGCGCGGAAATACTGAG +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNGLGVE*VRGNTE
Trigger: CTCAGTATTTCCGCGCACCAATTCGACTCCCAGACC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTAGCCCAAGGTCTCAGTCAGTTGATGGCTACAAGTGTTAAGTACCACAAGCCCGAGTTAAGCAAATTTTaGGGGGAAATGACACGCAAT +
Preference number: 5 (lower is better)
Translates to: LAQGLSQLMATSVKYHKPELSKF*GEMTRN
Trigger: ATTGCGTGTCATTTCCCCCAAAAATTTGCTTAACTC...GGGCTTGTGGTACTTAACACTTGTAGCCATCAACTGACTGAGACCTTGGGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACCAGGCGGTAAGGCCTTaGACAGGGTTTCCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNQAVRP*TGFPGR
Trigger: TCTTCCTGGAAACCCTGTCAAAGGCCTTACCGCCTG...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCTCCACGTTACGGTACTaGGTGAAGAGGTTGTACAAC +
Preference number: 5 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFSTLRY*VKRLYN
Trigger: GTTGTACAACCTCTTCACCAAGTACCGTAACGTGGA...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GGGGTCGGTGCCCATATCATTCAAGGATCAACCGTACTTTCATATGAAAGTTGTCGGTGCCTGAGCATATaGTACATTTGCTTAACGATA +
Preference number: 5 (lower is better)
Translates to: GVGAHIIQGSTVLSYESCRCLSI*YICLTI
Trigger: TATCGTTAAGCAAATGTACAATATGCTCAGGCACCG...ACAACTTTCATATGAAAGTACGGTTGATCCTTGAATGATATGGGCACCGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCAGTAACCACAAGCCCTaGAGTAACCCACGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFSNHKP*SNPRKE
Trigger: TTCTTTGCGTGGGTTACTCAAGGGCTTGTGGTTACT...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGTTCAAGGGTCCCTGTaGAAGAGCCCTACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNVQGSL*KSPTSK
Trigger: TTTGGAAGTAGGGCTCTTCAACAGGGACCCTTGAAC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCACAAGGTCTCAGTCAGTaGATGGCTACAAGTGTTAAG +
Preference number: 5 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSQGLSQ*MATSVK
Trigger: CTTAACACTTGTAGCCATCAACTGACTGAGACCTTG...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp TTTCCAACCAAGGAGATTTCAAGCGGGGATTTCCAAGCATATTTCTGGAATTTCGCTGAAAGGAATGTTTaGGACATTATAGGAGGCCTA +
Preference number: 5 (lower is better)
Translates to: FPTKEISSGDFQAYFWNFAERNV*DIIGGL
Trigger: TAGGCCTCCTATAATGTCCAAAACATTCCTTTCAGC...GAAATTCCAGAAATATGCTTGGAAATCCCCGCTTGAAATCTCCTTGGTTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GATTTTAGTACTTCTCCATCGCGACAGTCACAATTTGTAACTAACGTCGATTCATACTTGGTGAAGAGGTaGTACAACACTCGTAGTGTA +
Preference number: 5 (lower is better)
Translates to: DFSTSPSRQSQFVTNVDSYLVKR*YNTRSV
Trigger: TACACTACGAGTGTTGTACAACCTCTTCACCAAGTA...TGAATCGACGTTAGTTACAAATTGTGACTGTCGCGATGGAGAAGTACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACCATCCTGCTTCAGTATaGCTCAAGAAAATGAAGCAA +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNHPASV*LKKMKQ
Trigger: TTGCTTCATTTTCTTGAGCAATACTGAAGCAGGATG...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS-3UTR CAA 90 bp GTCGAAACTCTGGTATTTGTAAATGTAGCCTTTGTAGTTAGGATTGTGAGTAACGCTGCAGCAATTCTCTaGGATTTTCCAATAGAGTTA +
Preference number: 5 (lower is better)
Translates to: VETLVFVNVAFVVRIVSNAAAIL*DFPIEL
Trigger: TAACTCTATTGGAAAATCCAAGAGAATTGCTGCAGC...GTTACTCACAATCCTAACTACAAAGGCTACATTTACAAATACCAGAGTTTCGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 72 bp TTGGGAGTGGGAGACTTGGGGACAGAAGGCGACTTCTaGGGGGAGGTGGCCATGGCGCGGCGCAGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LGVGDLGTEGDF*GEVAMARRRLP
Trigger: CGGCAGCCTGCGCCGCGCCATGGCCACCTCCCCGCAGAAGTCGCCTTCTGTCCCCAAGTCTCCCACTCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000530755.5
CDS CAA 90 bp GTGTCCTCGGGGTCCAGCTCAAAGGGAATTGGGCTGAGGGGCAGGTaGATGGCGTTCATTCCCTCCTCCTGCAGCTCGGACACTGGTCCC +
Preference number: 6 (lower is better)
Translates to: VSSGSSSKGIGLRGR*MAFIPSSCSSDTGP
Trigger: GGGACCAGTGTCCGAGCTGCAGGAGGAGGGAATGAACGCCATCAACCTGCCCCTCAGCCCAATTCCCTTTGAGCTGGACCCCGAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 90 bp GTGTCCTCGGGGTCCAGCTCAAAGGGAATTGGGCTGAGGGGCAGGTaGATGGCGTTCATTCCCTCCTCCTGCAGCTCGGACACCTCCTTG +
Preference number: 6 (lower is better)
Translates to: VSSGSSSKGIGLRGR*MAFIPSSCSSDTSL
Trigger: CAAGGAGGTGTCCGAGCTGCAGGAGGAGGGAATGAACGCCATCAACCTGCCCCTCAGCCCAATTCCCTTTGAGCTGGACCCCGAGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000530755.5
CDS CCA 72 bp AATCATCTTTCTTGCGGGACGGGGGCGACTTGGGAGTaGGAGACTTGGGGACAGAAGGCGACTTCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: NHLSCGTGATWE*ETWGQKATSAG
Trigger: CCCCGCAGAAGTCGCCTTCTGTCCCCAAGTCTCCCACTCCCAAGTCGCCCCCGTCCCGCAAGAAAGATGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000530755.5
CDS CAA 72 bp GGGTCCAGCTCAAAGGGAATTGGGCTGAGGGGCAGGTaGATGGCGTTCATTCCCTCCTCCTGCAGCTCGGAC +
Preference number: 6 (lower is better)
Translates to: GSSSKGIGLRGR*MAFIPSSCSSD
Trigger: GTCCGAGCTGCAGGAGGAGGGAATGAACGCCATCAACCTGCCCCTCAGCCCAATTCCCTTTGAGCTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334956.15
ENST00000526746.5
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
ENST00000533392.1
CDS TCA 72 bp GGCAAGGGGGAAAGCCCTGTGTGTGCAGAGGTTAGGTaGTGCCACCAGTTCTGGCAGGAAGCTCGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: GKGESPVCAEVR*CHQFWQEARKL
Trigger: CAGCTTGCGAGCTTCCTGCCAGAACTGGTGGCATCACCTAACCTCTGCACACACAGGGCTTTCCCCCTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 72 bp CACTGGTCCCTGTCATGCAGGCCAGCAAACAGCAGCTaGTCTTCCTCCGCAGCCTGGTTGGGGTGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: HWSLSCRPANSS*SSSAAWLGCCS
Trigger: AGAACAACACCCCAACCAGGCTGCGGAGGAAGACCAGCTGCTGTTTGCTGGCCTGCATGACAGGGACCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 72 bp GAGGAGTGGGGAAGGCTGAGATTGCTGGGGTTAGCCTaGGTGGGAAGACAGGCTGTTCATGCTGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: EEWGRLRLLGLA*VGRQAVHADGG
Trigger: CCCTCCATCAGCATGAACAGCCTGTCTTCCCACCCAGGCTAACCCCAGCAATCTCAGCCTTCCCCACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 72 bp GGCAAAGTGCCCCGCAGCCCATGGTCTAGGATTTCATaGCAATCATGGCATCTTCTGCCCAGAGCTGACCCC +
Preference number: 6 (lower is better)
Translates to: GKVPRSPWSRIS*QSWHLLPRADP
Trigger: GGGGTCAGCTCTGGGCAGAAGATGCCATGATTGCCATGAAATCCTAGACCATGGGCTGCGGGGCACTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS TCA 72 bp CCTCCGCAGCCTGGTTGGGGTGTTGTTCTCAGGGAGTaGTCTAAGTCCCAAGGAGGGCAGCTCTTGGAATGT +
Preference number: 6 (lower is better)
Translates to: PPQPGWGVVLRE*SKSQGGQLLEC
Trigger: ACATTCCAAGAGCTGCCCTCCTTGGGACTTAGATCACTCCCTGAGAACAACACCCCAACCAGGCTGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 72 bp CATGGCATCTTCTGCCCAGAGCTGACCCCCTCCCTGTaGTTTCTACCCTTCTGCTTTCAGACCAACTGGAGG +
Preference number: 6 (lower is better)
Translates to: HGIFCPELTPSL*FLPFCFQTNWR
Trigger: CCTCCAGTTGGTCTGAAAGCAGAAGGGTAGAAACCACAGGGAGGGGGTCAGCTCTGGGCAGAAGATGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CAA 72 bp AAGAAGGAATCATCTTTCTTGCGGGACGGGGGCGACTaGGGAGTGGGAGACTTGGGGACAGAAGGCGACTTC +
Preference number: 6 (lower is better)
Translates to: KKESSFLRDGGD*GVGDLGTEGDF
Trigger: GAAGTCGCCTTCTGTCCCCAAGTCTCCCACTCCCAAGTCGCCCCCGTCCCGCAAGAAAGATGATTCCTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000530755.5
CDS CAA 72 bp TCGCAAGCTGCAGGGATGGGTTTTCCCAATGTTCTGTaGCATCTCGCTTCCCTCTGTCCATCCCAGGCACCC +
Preference number: 6 (lower is better)
Translates to: SQAAGMGFPNVL*HLASLCPSQAP
Trigger: GGGTGCCTGGGATGGACAGAGGGAAGCGAGATGCAACAGAACATTGGGAAAACCCATCCCTGCAGCTTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CCA 72 bp CACCAGTTCTGGCAGGAAGCTCGCAAGCTGCAGGGATaGGTTTTCCCAATGTTCTGTTGCATCTCGCTTCCC +
Preference number: 6 (lower is better)
Translates to: HQFWQEARKLQG*VFPMFCCISLP
Trigger: GGGAAGCGAGATGCAACAGAACATTGGGAAAACCCATCCCTGCAGCTTGCGAGCTTCCTGCCAGAACTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 90 bp TCAGTTCTTGAAGCTTGGGGTCACTGCGTGAGTTTGGATCCACCATaGTTCGCACCTCATTCTCCTCCAGCATCGTGTCCTCGGGGTCCA +
Preference number: 6 (lower is better)
Translates to: SVLEAWGHCVSLDPP*FAPHSPPASCPRGP
Trigger: TGGACCCCGAGGACACGATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334956.15
ENST00000526746.5
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
ENST00000533392.1
CDS TCA 72 bp ACATGGTCTGGGAGTCGAATTGGTGCGCGGAAATACTaGGACAGAGCAACGAGCAGGTGTAAGATGGCCACC +
Preference number: 6 (lower is better)
Translates to: TWSGSRIGARKY*DRATSRCKMAT
Trigger: GGTGGCCATCTTACACCTGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS TCA 72 bp GAGTTAAAAGCTGTAGTCACTGGGACAGATGCGTGGTaGGGCTCCCGGCTTAGCCATGTCTTCATGTGCCGA +
Preference number: 6 (lower is better)
Translates to: ELKAVVTGTDAW*GSRLSHVFMCR
Trigger: TCGGCACATGAAGACATGGCTAAGCCGGGAGCCTCACCACGCATCTGTCCCAGTGACTACAGCTTTTAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS GCA 72 bp GGATCTTCTCAAATGCTTCCCGAAGAGAATGCCTCCTaGTCGGCACAACTCTCAGCTCAGTGCGTCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GSSQMLPEENAS*SAQLSAQCVSC
Trigger: GCAACTGACGCACTGAGCTGAGAGTTGTGCCGAGCAGGAGGCATTCTCTTCGGGAAGCATTTGAGAAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS GCA 72 bp GGTGATGCCACCAGTTCTGGCAGGAAGCTCGCAAGCTaGAGGGATGGGTTTTCCCAATGTTCTGTTGCATCT +
Preference number: 6 (lower is better)
Translates to: GDATSSGRKLAS*RDGFSQCSVAS
Trigger: AGATGCAACAGAACATTGGGAAAACCCATCCCTGCAGCTTGCGAGCTTCCTGCCAGAACTGGTGGCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 72 bp GAAGCTTGGGGTCACTGCGTGAGTTTGGATCCACCATaGTTCGCACCTCATTCTCCTCCAGCATCGTGTCCT +
Preference number: 6 (lower is better)
Translates to: EAWGHCVSLDPP*FAPHSPPASCP
Trigger: AGGACACGATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334956.15
ENST00000526746.5
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
ENST00000533392.1
CDS TCA 72 bp GGAGACAGCTGGGGGTCATCGGATGATGGAATGCTTTaGATGTTGTGCCAAGGGGTTTGGACTTTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: GDSWGSSDDGML*MLCQGVWTLSS
Trigger: GCTGGACAAAGTCCAAACCCCTTGGCACAACATTCAAAGCATTCCATCATCCGATGACCCCCAGCTGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS TCA 72 bp TGGGTGAGACCAAGGAGACAGCTGGGGGTCATCGGATaGTGGAATGCTTTGAATGTTGTGCCAAGGGGTTTG +
Preference number: 6 (lower is better)
Translates to: WVRPRRQLGVIG*WNALNVVPRGL
Trigger: CAAACCCCTTGGCACAACATTCAAAGCATTCCATCATCCGATGACCCCCAGCTGTCTCCTTGGTCTCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS TCA 72 bp ACACGTATTACTACACGGATGAGCCACATGTGTGGGTaGGACCAAGGAGACAGCTGGGGGTCATCGGATGAT +
Preference number: 6 (lower is better)
Translates to: TRITTRMSHMCG*DQGDSWGSSDD
Trigger: ATCATCCGATGACCCCCAGCTGTCTCCTTGGTCTCACCCACACATGTGGCTCATCCGTGTAGTAATACGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS GCA 72 bp CACTTGGATGGAAACATGGTCTGGGAGTCGAATTGGTaGGCGGAAATACTGAGACAGAGCAACGAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: HLDGNMVWESNW*AEILRQSNEQV
Trigger: CACCTGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CCA 72 bp CTTTACACGTATTACTACACGGATGAGCCACATGTGTaGGTGAGACCAAGGAGACAGCTGGGGGTCATCGGA +
Preference number: 6 (lower is better)
Translates to: LYTYYYTDEPHV*VRPRRQLGVIG
Trigger: TCCGATGACCCCCAGCTGTCTCCTTGGTCTCACCCACACATGTGGCTCATCCGTGTAGTAATACGTGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CAA 90 bp TCTGGACCACAACCACTTGGATGGAAACATGGTCTGGGAGTCGAATaGGTGCGCGGAAATACTGAGACAGAGCAACGAGCAGGTGTAAGA +
Preference number: 6 (lower is better)
Translates to: SGPQPLGWKHGLGVE*VRGNTETEQRAGVR
Trigger: TCTTACACCTGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTGGTTGTGGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CAA 90 bp CCTCCCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTTGGATTaGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACAACCAC +
Preference number: 6 (lower is better)
Translates to: PPGKSLCVTSYFLLD*PRLEDSFSFLDHNH
Trigger: GTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS CCA 72 bp AACCACTTGGATGGAAACATGGTCTGGGAGTCGAATTaGTGCGCGGAAATACTGAGACAGAGCAACGAGCAG +
Preference number: 6 (lower is better)
Translates to: NHLDGNMVWESN*CAEILRQSNEQ
Trigger: CTGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CAA 72 bp CAACCACTTGGATGGAAACATGGTCTGGGAGTCGAATaGGTGCGCGGAAATACTGAGACAGAGCAACGAGCA +
Preference number: 6 (lower is better)
Translates to: QPLGWKHGLGVE*VRGNTETEQRA
Trigger: TGCTCGTTGCTCTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CAA 90 bp TTCATGCCTCCCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTaGGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCAC +
Preference number: 6 (lower is better)
Translates to: FMPPGKSLCVTSYFL*DLPRLEDSFSFLDH
Trigger: GTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGGGAGGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 72 bp GCATGGTCGAACAAGGTGTCAAAGGCATCACGTTCATaGCTCCCGGAAAGAGCCTCTGTGTTACCAGTTATT +
Preference number: 6 (lower is better)
Translates to: AWSNKVSKASRS*LPERASVLPVI
Trigger: AATAACTGGTAACACAGAGGCTCTTTCCGGGAGGCATGAACGTGATGCCTTTGACACCTTGTTCGACCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS GCA 72 bp GAGAATGCCTCCTGCTCGGCACAACTCTCAGCTCAGTaGGTCAGTTGCAAACAAGTGGCTGCCTATATAATT +
Preference number: 6 (lower is better)
Translates to: ENASCSAQLSAQ*VSCKQVAAYII
Trigger: AATTATATAGGCAGCCACTTGTTTGCAACTGACGCACTGAGCTGAGAGTTGTGCCGAGCAGGAGGCATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CCA 72 bp GGAAATACTGAGACAGAGCAACGAGCAGGTGTAAGATaGCCACCAGGCTCTTGGCATGAACAGAATCCACAT +
Preference number: 6 (lower is better)
Translates to: GNTETEQRAGVR*PPGSWHEQNPH
Trigger: ATGTGGATTCTGTTCATGCCAAGAGCCTGGTGGCCATCTTACACCTGCTCGTTGCTCTGTCTCAGTATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CCA 72 bp TTTCTGGACCACAACCACTTGGATGGAAACATGGTCTaGGAGTCGAATTGGTGCGCGGAAATACTGAGACAG +
Preference number: 6 (lower is better)
Translates to: FLDHNHLDGNMV*ESNWCAEILRQ
Trigger: CTGTCTCAGTATTTCCGCGCACCAATTCGACTCCCAGACCATGTTTCCATCCAAGTGGTTGTGGTCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CAA 72 bp TCATCAGTTCTTGAAGCTTGGGGTCACTGCGTGAGTTaGGATCCACCATTGTTCGCACCTCATTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSVLEAWGHCVS*DPPLFAPHSPP
Trigger: TGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334956.15
ENST00000526746.5
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
ENST00000533392.1
CDS CAA 90 bp AGAGAATGCCTCCTGCTCGGCACAACTCTCAGCTCAGTGCGTCAGTaGCAAACAAGTGGCTGCCTATATAATTTAATACGATGCCACTGG +
Preference number: 6 (lower is better)
Translates to: RECLLLGTTLSSVRQ*QTSGCLYNLIRCHW
Trigger: CCAGTGGCATCGTATTAAATTATATAGGCAGCCACTTGTTTGCAACTGACGCACTGAGCTGAGAGTTGTGCCGAGCAGGAGGCATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CAA 90 bp ACTCTATCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTGAGTTaGGATCCACCATTGTTCGCACCTCATTCTCCTCCAGCATCGTGT +
Preference number: 6 (lower is better)
Translates to: TLSSSVLEAWGHCVS*DPPLFAPHSPPASC
Trigger: ACACGATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526746.5
CDS TCA 72 bp TACCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGTTCGCACCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: YLHQFLKLGVTA*VWIHHCSHLIL
Trigger: GAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
CDS TCA 72 bp GATCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGTTCGCACCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: DLHQFLKLGVTA*VWIHHCSHLIL
Trigger: GAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533392.1
CDS GCA 72 bp AGAGCCTCTGTGTTACCAGTTATTTCCTCTTGGATTTaGCGAGACTGGAGGATTCCTTCTCGTTTCTGGACC +
Preference number: 6 (lower is better)
Translates to: RASVLPVISSWI*RDWRIPSRFWT
Trigger: GGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS CCA 72 bp CCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTTaGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTC +
Preference number: 6 (lower is better)
Translates to: PERASVLPVISS*ICRDWRIPSRF
Trigger: GAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS CCA 72 bp AGTGTCTTTTTCACCACATTCAGCTTGTCTGGGGCATaGTCGAACAAGGTGTCAAAGGCATCACGTTCATGC +
Preference number: 6 (lower is better)
Translates to: SVFFTTFSLSGA*SNKVSKASRSC
Trigger: GCATGAACGTGATGCCTTTGACACCTTGTTCGACCATGCCCCAGACAAGCTGAATGTGGTGAAAAAGACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CCA 72 bp TATACAGTGGGGTCTTTTCATCTAGCTGATGATTCTTaGCTGCTAGAAGGAGCAGGCCCACCTAGTCATGGA +
Preference number: 6 (lower is better)
Translates to: YTVGSFHLADDS*LLEGAGPPSHG
Trigger: TCCATGACTAGGTGGGCCTGCTCCTTCTAGCAGCCAAGAATCATCAGCTAGATGAAAAGACCCCACTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CAA 72 bp CCCGGAAAGAGCCTCTGTGTTACCAGTTATTTCCTCTaGGATTTGCCGAGACTGGAGGATTCCTTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: PGKSLCVTSYFL*DLPRLEDSFSF
Trigger: AAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTTTCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS CAA 90 bp TTAATACCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTGAGTTaGGATCCACCATTGTTCGCACCTCATTCTCCTCCAGCATCGTGT +
Preference number: 6 (lower is better)
Translates to: LIPSSVLEAWGHCVS*DPPLFAPHSPPASC
Trigger: ACACGATGCTGGAGGAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
CDS TCA 72 bp TATCTTCATCAGTTCTTGAAGCTTGGGGTCACTGCGTaGGTTTGGATCCACCATTGTTCGCACCTCATTCTC +
Preference number: 6 (lower is better)
Translates to: YLHQFLKLGVTA*VWIHHCSHLIL
Trigger: GAGAATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526746.5
CDS TCA 72 bp ACTATCCTAAGCACTTTACACGTATTACTACACGGATaGGCCACATGTGTGGGTGAGACCAAGGAGACAGCT +
Preference number: 6 (lower is better)
Translates to: TILSTLHVLLHG*ATCVGETKETA
Trigger: AGCTGTCTCCTTGGTCTCACCCACACATGTGGCTCATCCGTGTAGTAATACGTGTAAAGTGCTTAGGATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS TCA 72 bp TTCCCTCCACCTGAGTATCCTACCCATTATGGGCTTTaGATGTGTATGCCCTGCCTCAGACCTTTGAGATTA +
Preference number: 6 (lower is better)
Translates to: FPPPEYPTHYGL*MCMPCLRPLRL
Trigger: TAATCTCAAAGGTCTGAGGCAGGGCATACACATTCAAAGCCCATAATGGGTAGGATACTCAGGTGGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS GCA 72 bp ACTCTATCTTCATCAGTTCTTGAAGCTTGGGGTCACTaGGTGAGTTTGGATCCACCATTGTTCGCACCTCAT +
Preference number: 6 (lower is better)
Translates to: TLSSSVLEAWGH*VSLDPPLFAPH
Trigger: ATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGATAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526746.5
CDS GCA 72 bp CCATTGCAGCACTCAACTCTCCTACCGAAAAGCTTCTaGAGGACTTGTCCATCATACAAATCTTCAGCTAGG +
Preference number: 6 (lower is better)
Translates to: PLQHSTLLPKSF*RTCPSYKSSAR
Trigger: CCTAGCTGAAGATTTGTATGATGGACAAGTCCTGCAGAAGCTTTTCGGTAGGAGAGTTGAGTGCTGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CCA 72 bp GTGTTACCAGTTATTTCCTCTTGGATTTGCCGAGACTaGAGGATTCCTTCTCGTTTCTGGACCACAACCACT +
Preference number: 6 (lower is better)
Translates to: VLPVISSWICRD*RIPSRFWTTTT
Trigger: AGTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000533345.5
CDS CCA 72 bp ACAAGTGGCTGCCTATATAATTTAATACGATGCCACTaGAGACTCACAGACCTGCTGCAAAGCAAGCGGGAT +
Preference number: 6 (lower is better)
Translates to: TSGCLYNLIRCH*RLTDLLQSKRD
Trigger: ATCCCGCTTGCTTTGCAGCAGGTCTGTGAGTCTCCAGTGGCATCGTATTAAATTATATAGGCAGCCACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CAA 72 bp AAGAGCCTCTGTGTTACCAGTTATTTCCTCTTGGATTaGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: KSLCVTSYFLLD*PRLEDSFSFLD
Trigger: GTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334956.15
ENST00000528916.1
CDS CAA 72 bp ACGAAAGTGATGAGTGTCTTTTTCACCACATTCAGCTaGTCTGGGGCATGGTCGAACAAGGTGTCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: TKVMSVFFTTFS*SGAWSNKVSKA
Trigger: TGCCTTTGACACCTTGTTCGACCATGCCCCAGACAAGCTGAATGTGGTGAAAAAGACACTCATCACTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334956.15
CDS CAA 72 bp CTCCTGCTCGGCACAACTCTCAGCTCAGTGCGTCAGTaGCAAACAAGTGGCTGCCTATATAATTTAATACGA +
Preference number: 6 (lower is better)
Translates to: LLLGTTLSSVRQ*QTSGCLYNLIR
Trigger: TCGTATTAAATTATATAGGCAGCCACTTGTTTGCAACTGACGCACTGAGCTGAGAGTTGTGCCGAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS CAA 90 bp AATGGTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTTGGATTaGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCACAACCAC +
Preference number: 6 (lower is better)
Translates to: NGVDILCVTSYFLLD*PRLEDSFSFLDHNH
Trigger: GTGGTTGTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 90 bp CACGTTAATGGTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTaGGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGACCAC +
Preference number: 6 (lower is better)
Translates to: HVNGVDILCVTSYFL*DLPRLEDSFSFLDH
Trigger: GTGGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACACCATTAACGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS GCA 72 bp TTAATACCTTCATCAGTTCTTGAAGCTTGGGGTCACTaGGTGAGTTTGGATCCACCATTGTTCGCACCTCAT +
Preference number: 6 (lower is better)
Translates to: LIPSSVLEAWGH*VSLDPPLFAPH
Trigger: ATGAGGTGCGAACAATGGTGGATCCAAACTCACGCAGTGACCCCAAGCTTCAAGAACTGATGAAGGTATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334956.15
ENST00000528916.1
ENST00000530755.5
ENST00000533345.5
CDS GCA 72 bp ACTCTCAGCTCAGTGCGTCAGTTGCAAACAAGTGGCTaGCTATATAATTTAATACGATGCCACTGGAGACTC +
Preference number: 6 (lower is better)
Translates to: TLSSVRQLQTSG*LYNLIRCHWRL
Trigger: GAGTCTCCAGTGGCATCGTATTAAATTATATAGGCAGCCACTTGTTTGCAACTGACGCACTGAGCTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528916.1
CDS GCA 72 bp ACATACTCTGTGTTACCAGTTATTTCCTCTTGGATTTaGCGAGACTGGAGGATTCCTTCTCGTTTCTGGACC +
Preference number: 6 (lower is better)
Translates to: TYSVLPVISSWI*RDWRIPSRFWT
Trigger: GGTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 72 bp GACATACTCTGTGTTACCAGTTATTTCCTCTTGGATTaGCCGAGACTGGAGGATTCCTTCTCGTTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: DILCVTSYFLLD*PRLEDSFSFLD
Trigger: GTCCAGAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS GCA 72 bp TGGAGAAGCCTGGATAAATATATAGGACATGGCTCGTaGCCTTGGGAAGCCTATACACATTTACCTAAACAG +
Preference number: 6 (lower is better)
Translates to: WRSLDKYIGHGS*PWEAYTHLPKQ
Trigger: CTGTTTAGGTAAATGTGTATAGGCTTCCCAAGGGCACGAGCCATGTCCTATATATTTATCCAGGCTTCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CCA 72 bp AGCCTGGATAAATATATAGGACATGGCTCGTGCCCTTaGGAAGCCTATACACATTTACCTAAACAGCTACAG +
Preference number: 6 (lower is better)
Translates to: SLDKYIGHGSCP*EAYTHLPKQLQ
Trigger: CTGTAGCTGTTTAGGTAAATGTGTATAGGCTTCCCAAGGGCACGAGCCATGTCCTATATATTTATCCAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CCA 72 bp GTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTTaGATTTGCCGAGACTGGAGGATTCCTTCTCGTTTC +
Preference number: 6 (lower is better)
Translates to: VLTYSVLPVISS*ICRDWRIPSRF
Trigger: GAAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS CAA 72 bp GATCTAATCTGCTTGTACGCAATGCCTAACGTGGGGTaGCATAGATGTGATGCTGGATGGTTTTGTAACCAT +
Preference number: 6 (lower is better)
Translates to: DLICLYAMPNVG*HRCDAGWFCNH
Trigger: ATGGTTACAAAACCATCCAGCATCACATCTATGCAACCCCACGTTAGGCATTGCGTACAAGCAGATTAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530755.5
CDS CAA 72 bp GGTGTTGACATACTCTGTGTTACCAGTTATTTCCTCTaGGATTTGCCGAGACTGGAGGATTCCTTCTCGTTT +
Preference number: 6 (lower is better)
Translates to: GVDILCVTSYFL*DLPRLEDSFSF
Trigger: AAACGAGAAGGAATCCTCCAGTCTCGGCAAATCCAAGAGGAAATAACTGGTAACACAGAGTATGTCAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533345.5
CDS TCA 72 bp TGTTCCATTACTCTGTGGCCATGTTCTACCTTGCTTTaGCAGCCTAGCATAGAACATTTTGGCAGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: CSITLWPCSTLL*QPSIEHFGSFR
Trigger: TCTGAAACTGCCAAAATGTTCTATGCTAGGCTGTCAAAGCAAGGTAGAACATGGCCACAGAGTAATGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530755.5