RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP9 (Homo sapiens)

Ensembl gene IDs: ENSG00000138496

Ensembl transcript IDs: ENST00000360356.6, ENST00000462315.5, ENST00000466126.1, ENST00000471785.5, ENST00000477522.6, ENST00000489652.1, ENST00000492382.5, ENST00000682323.1

Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGACTCTGGTGGGTGCAGTCCCTCATCCAGCTTCATCACCTGAGTaGAGAGTGGCAATGGCTGGAGAAGTCTCTGGAGCAGGTGAGGAC +
Preference number: 1 (lower is better)
Translates to: LTLVGAVPHPASSPE*RVAMAGEVSGAGED
Trigger: GTCCTCACCTGCTCCAGAGACTTCTCCAGCCATTGCCACTCTCCACTCAGGTGATGAAGCTGGATGAGGGACTGCACCCACCAGAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 90 bp ATAAGAACAATTGGAGGGACTCACAGAGCAGACAGGACCCTGGCCTaGCTCTGGTGGGTGCAGTCCCTCATCCAGCTTCATCACCTGAGT +
Preference number: 1 (lower is better)
Translates to: IRTIGGTHRADRTLA*LWWVQSLIQLHHLS
Trigger: ACTCAGGTGATGAAGCTGGATGAGGGACTGCACCCACCAGAGTCAGGCCAGGGTCCTGTCTGCTCTGTGAGTCCCTCCAATTGTTCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 90 bp CCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAGGGGGCAGAACAATaGAAATCTCGGAATAAGAACAATTGGAGGGACTCACAGAGCAGA +
Preference number: 1 (lower is better)
Translates to: PHSLESPGSQEGAEQ*KSRNKNNWRDSQSR
Trigger: TCTGCTCTGTGAGTCCCTCCAATTGTTCTTATTCCGAGATTTCCATTGTTCTGCCCCCTCTTGACTCCCAGGGCTCTCAAGGGAGTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 90 bp AGTTCTTTCTTCCAGCTGGTGGGAAAAGAAGTATCAGAAGTGATGTaGCTAGAGCTCTTGGGGGAGCTTGGGAAAGGGCTCCCTTCACTA +
Preference number: 1 (lower is better)
Translates to: SSFFQLVGKEVSEVM*LELLGELGKGLPSL
Trigger: TAGTGAAGGGAGCCCTTTCCCAAGCTCCCCCAAGAGCTCTAGTCACATCACTTCTGATACTTCTTTTCCCACCAGCTGGAAGAAAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 90 bp ACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAGAGTaGCCTGTGCAGACACTACCTGAGTGTGAAAGGCACAGGAGACTG +
Preference number: 1 (lower is better)
Translates to: TWPGKEFLQHGKDIE*PVQTLPECERHRRL
Trigger: CAGTCTCCTGTGCCTTTCACACTCAGGTAGTGTCTGCACAGGCCACTCTATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 90 bp CCTGCATTCAGCTTGGAGGATGAACATGCTCAAAAATTTCCTGTGTaGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGC +
Preference number: 1 (lower is better)
Translates to: PAFSLEDEHAQKFPV*QEEHRHGLERNFFS
Trigger: GCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCCACACAGGAAATTTTTGAGCATGTTCATCCTCCAAGCTGAATGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 90 bp CTTGTCTGGCACCTTCTGTTAAGAGTTCTCTCTAGCCTACAGAGATaGGTCAATTGGTGCAGGTCACATTATGAGTCATGTCTGAATTGC +
Preference number: 1 (lower is better)
Translates to: LVWHLLLRVLSSLQR*VNWCRSHYESCLNC
Trigger: GCAATTCAGACATGACTCATAATGTGACCTGCACCAATTGACTCATCTCTGTAGGCTAGAGAGAACTCTTAACAGAAGGTGCCAGACAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 90 bp CTAGTAAAGGAGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTaGAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACAT +
Preference number: 1 (lower is better)
Translates to: LVKEIKEQLQEEGRS*KCFIWYLPTPTPRH
Trigger: ATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCTCCTTTACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
3UTR-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTCCAGCTTCATCACCTaGGTGGAGAGTGGCAATGGC +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKSSFIT*VESGNG
Trigger: GCCATTGCCACTCTCCACTCAGGTGATGAAGCTGGA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGGAAAAGACATAGAGTaGCCTGTGCAGACACTACCT +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKGKDIE*PVQTLP
Trigger: AGGTAGTGTCTGCACAGGCCACTCTATGTCTTTTCC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAAGGAACTGTATTGCTaGAGAAACCACAAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKKELYC*RNHKPG
Trigger: ACCAGGCTTGTGGTTTCTTCAGCAATACAGTTCCTT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAACTGCATGTGTAGATaGCTTCTTGCTGCACTCAAC +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKNCMCR*LLAALN
Trigger: GTTGAGTGCAGCAAGAAGGCATCTACACATGCAGTT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGACCCTGCATTCAGCTTaGAGGATGAACATGCTCAAA +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKTLHSA*RMNMLK
Trigger: TTTGAGCATGTTCATCCTCCAAGCTGAATGCAGGGT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTTCCAAAATACTTTGTaGCCTGGGTCATCATTTGTG +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKFQNTL*PGSSFV
Trigger: CACAAATGATGACCCAGGTCACAAAGTATTTTGGAA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAAACATTGCAGGAACTaGGTTTCAATCTTGAAGGGA +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKKHCRN*VSILKG
Trigger: TCCCTTCAAGATTGAAACTCAGTTCCTGCAATGTTT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGATGCCAACCAGGAGATaGCATTTGTACTATGTCTTA +
Preference number: 2 (lower is better)
Translates to: WERAPFTTPTPLRALGVKMPTRR*HLYYVL
Trigger: TAAGACATAGTACAAATGGCATCTCCTGGTTGGCAT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATCTCGGAGGCGGAGGTTaGAGTGAGCCAAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHLGGGG*SEPRWC
Trigger: GCACCATCTTGGCTCACTGCAACCTCCGCCTCCGAG...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAACACTTTGGGAGGCTaGGGTGGACGGATCACGAGT +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHNTLGG*GGRITS
Trigger: ACTCGTGATCCGTCCACCTCAGCCTCCCAAAGTGTT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATCGGATCACGAGTAGCTaGAGATCAGCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHRITSS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCCAGCTACTCGTGATCCG...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATGTAGTGGGTGGGGATTaGAGAGAAGCCAGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHVVGGD*REASFR
Trigger: CCTAAAGCTGGCTTCTCTGCAATCCCCACCCACTAC...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAATCACAGTCACAAATaGTCCCTTCCCCACAACAAC +
Preference number: 2 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRNHSHK*SLPHNN
Trigger: GTTGTTGTGGGGAAGGGATCATTTGTGACTGTGATT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAAGATTGGTGTCTCCTaGGCTTGTCTGGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHKIGVS*ACLAPS
Trigger: AGAAGGTGCCAGACAAGCCCAGGAGACACCAATCTT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGTAAGCCCAACACTTTaGGAGGCTGAGGTGGACGGA +
Preference number: 2 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLVSPTL*EAEVDG
Trigger: TCCGTCCACCTCAGCCTCCCAAAGTGTTGGGCTTAC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATCAGCATGTAGATAAGTaGTGTGAGCCAGTGGCTGTT +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHQHVDK*CEPVAV
Trigger: AACAGCCACTGGCTCACACCACTTATCTACATGCTG...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCTGGGTCATCATTTGTaGCCTCTAAATCACAGTCAC +
Preference number: 2 (lower is better)
Translates to: ANEGTILIITFLIAPKGFLGHHL*PLNHSH
Trigger: GTGACTGTGATTTAGAGGTCACAAATGATGACCCAG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGGCTTTAAGAGAGAACTaGCTGCTGGGCATGGTGGCT +
Preference number: 2 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMALREN*LLGMVA
Trigger: AGCCACCATGCCCAGCAGGCAGTTCTCTCTTAAAGC...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CAA 90 bp CTCCTTTTTATATCACTATATAATGAGTATGTTGGGGGCAGTATCTaGCCTTTAAGCTTTAAGAGAGAACTGCCTGCTGGGCATGGTGGC +
Preference number: 2 (lower is better)
Translates to: LLFISLYNEYVGGSI*PLSFKRELPAGHGG
Trigger: GCCACCATGCCCAGCAGGCAGTTCTCTCTTAAAGCTTAAAGGCAAGATACTGCCCCCAACATACTCATTATATAGTGATATAAAAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCAAGTCTATTGGAATTaGCTCCTCAGCAAGGATCAT +
Preference number: 2 (lower is better)
Translates to: ANEGTILIITFLIAPKGFQVYWN*LLSKDH
Trigger: ATGATCCTTGCTGAGGAGTCAATTCCAATAGACTTG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACACATAGAACTCCTATaGATGAAGAGGATCTTAAGA +
Preference number: 2 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRHIELL*MKRILR
Trigger: TCTTAAGATCCTCTTCATCCATAGGAGTTCTATGTG...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGTCTGGCTAAGACCTTaGGACCATATTCCTTGGGAG +
Preference number: 2 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLVWLRP*DHIPWE
Trigger: CTCCCAAGGAATATGGTCCCAAGGTCTTAGCCAGAC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTCTCCCCTTTCAACATaGGAGTTTTCATTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHSPLST*EFSLQF
Trigger: AAACTGCAATGAAAACTCTCATGTTGAAAGGGGAGA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAATCTTCATTAGTGACTaGGGAGTAGAGGGGGCAATA +
Preference number: 2 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKIFISD*GVEGAI
Trigger: TATTGCCCCCTCTACTCCTCAGTCACTAATGAAGAT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGGCTGTTGTGTGTTTTaGTTCTCCCCTTTCAACATG +
Preference number: 2 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLGCCVF*FSPFNM
Trigger: CATGTTGAAAGGGGAGAAGCAAAACACACAACAGCC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR TCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATTCAAGCCACTCTTTaGGCCATCGATGGTCATTAT +
Preference number: 2 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGIQATL*AIDGHY
Trigger: ATAATGACCATCGATGGCTCAAAGAGTGGCTTGAAT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
3UTR-3UTR TCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGAAAGGAGAAAAACAGTaGACCGTAGTTCTTACTGCT +
Preference number: 2 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMKGEKQ*TVVLTA
Trigger: AGCAGTAAGAACTACGGTTCACTGTTTTTCTCCTTT...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR GCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGATTTACCCCAAGTTTTaGCTATGTTCTCTCCAGAAC +
Preference number: 2 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLIYPKF*LCSLQN
Trigger: GTTCTGGAGAGAACATAGGCAAAACTTGGGGTAAAT...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAAAGGTTTTACAACATaGAATAGGGAGTCCTCTCTA +
Preference number: 2 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKKGFTT*NRESSL
Trigger: TAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGGAGAGTCCTATAATTTaGAATATTGCACGGCTGAAA +
Preference number: 2 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMESPII*NIARLK
Trigger: TTTCAGCCGTGCAATATTCCAAATTATAGGACTCTC...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp CTTGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTaGGAGCCCTGGGAGTCAAGAGGGGGCAGAACAATG +
Preference number: 3 (lower is better)
Translates to: LGKGLPSLPPLP*EPWESRGGRTM
Trigger: CATTGTTCTGCCCCCTCTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp GAACAATTGGAGGGACTCACAGAGCAGACAGGACCCTaGCCTGACTCTGGTGGGTGCAGTCCCTCATCCAGC +
Preference number: 3 (lower is better)
Translates to: EQLEGLTEQTGP*PDSGGCSPSSS
Trigger: GCTGGATGAGGGACTGCACCCACCAGAGTCAGGCCAGGGTCCTGTCTGCTCTGTGAGTCCCTCCAATTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp TCTGGTGGGTGCAGTCCCTCATCCAGCTTCATCACCTaGGTGGAGAGTGGCAATGGCTGGAGAAGTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SGGCSPSSSFIT*VESGNGWRSLW
Trigger: CCAGAGACTTCTCCAGCCATTGCCACTCTCCACTCAGGTGATGAAGCTGGATGAGGGACTGCACCCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp GTGGGTGCAGTCCCTCATCCAGCTTCATCACCTGAGTaGAGAGTGGCAATGGCTGGAGAAGTCTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: VGAVPHPASSPE*RVAMAGEVSGA
Trigger: TGCTCCAGAGACTTCTCCAGCCATTGCCACTCTCCACTCAGGTGATGAAGCTGGATGAGGGACTGCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp ATCAGAAGTGATGTGACTAGAGCTCTTGGGGGAGCTTaGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTG +
Preference number: 3 (lower is better)
Translates to: IRSDVTRALGGA*ERAPFTTPTPL
Trigger: CAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCAAGCTCCCCCAAGAGCTCTAGTCACATCACTTCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGAAAAGGGGCAAACATaGCAGGAACTGAGTTTCAAT +
Preference number: 3 (lower is better)
Translates to: WERAPFTTPTPLRALGVKEKGQT*QELSFN
Trigger: ATTGAAACTCAGTTCCTGCAATGTTTGCCCCTTTTC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp GGGGCAGAACAATGGAAATCTCGGAATAAGAACAATTaGAGGGACTCACAGAGCAGACAGGACCCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: GAEQWKSRNKNN*RDSQSRQDPGL
Trigger: CAGGCCAGGGTCCTGTCTGCTCTGTGAGTCCCTCCAATTGTTCTTATTCCGAGATTTCCATTGTTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGATTTCTTTTCCTCTTTaGGAGAGAACTAAAGCCAGA +
Preference number: 3 (lower is better)
Translates to: WERAPFTTPTPLRALGVKISFPL*ERTKAR
Trigger: TCTGGCTTTAGTTCTCTCCAAAAGAGGAAAAGAAAT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGACCAAAATCTTGAGTaGAAAGACTATATGGAGACA +
Preference number: 3 (lower is better)
Translates to: WERAPFTTPTPLRALGVKDQNLE*KDYMET
Trigger: TGTCTCCATATAGTCTTTCAACTCAAGATTTTGGTC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp TTCCAGCTGGTGGGAAAAGAAGTATCAGAAGTGATGTaGCTAGAGCTCTTGGGGGAGCTTGGGAAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: FQLVGKEVSEVM*LELLGELGKGL
Trigger: GAGCCCTTTCCCAAGCTCCCCCAAGAGCTCTAGTCACATCACTTCTGATACTTCTTTTCCCACCAGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp GACCACTACCCAAGACCCTGCATTCAGCTTGGAGGATaGACATGCTCAAAAATTTCCTGTGTGGCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: DHYPRPCIQLGG*TCSKISCVAGG
Trigger: TCCTCCTGCCACACAGGAAATTTTTGAGCATGTTCATCCTCCAAGCTGAATGCAGGGTCTTGGGTAGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp TCAGTGGTAGCAAGATTGGTGTCTCCTGGGCTTGTCTaGCACCTTCTGTTAAGAGTTCTCTCTAGCCTACAG +
Preference number: 3 (lower is better)
Translates to: SVVARLVSPGLV*HLLLRVLSSLQ
Trigger: CTGTAGGCTAGAGAGAACTCTTAACAGAAGGTGCCAGACAAGCCCAGGAGACACCAATCTTGCTACCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATGTGAGCCAGTGGCTGTaGTGTGTTTTGCTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHVSQWL*CVLLLP
Trigger: GGGGAGAAGCAAAACACACAACAGCCACTGGCTCAC...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAAACCACAAGCCTGGTaGCAACAGCCTGAGCACATT +
Preference number: 3 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRKPQAW*QQPEHI
Trigger: AATGTGCTCAGGCTGTTGCAACCAGGCTTGTGGTTT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp AACAACAGCTTCAGTGGTAGCAAGATTGGTGTCTCCTaGGCTTGTCTGGCACCTTCTGTTAAGAGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: NNSFSGSKIGVS*ACLAPSVKSSL
Trigger: GAGAGAACTCTTAACAGAAGGTGCCAGACAAGCCCAGGAGACACCAATCTTGCTACCACTGAAGCTGTTGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTCAGTGGTAGCAAGATaGGTGTCTCCTGGGCTTGTC +
Preference number: 3 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHSVVAR*VSPGLV
Trigger: GACAAGCCCAGGAGACACCAATCTTGCTACCACTGA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp CTCGTGCCCACTGAATTTTTAAAGGAACTGTATTGCTaGAGAAACCACAAGCCTGGTTGCAACAGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LVPTEFLKELYC*RNHKPGCNSLS
Trigger: GCTCAGGCTGTTGCAACCAGGCTTGTGGTTTCTTCAGCAATACAGTTCCTTTAAAAATTCAGTGGGCACGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp GCTGCAGTCTTGAGGAACATAGTGGGTGATGACTGCTaGAATAATGTGGGAGCTAGGGCCTTATATTCTCTG +
Preference number: 3 (lower is better)
Translates to: AAVLRNIVGDDC*NNVGARALYSL
Trigger: CAGAGAATATAAGGCCCTAGCTCCCACATTATTTCAGCAGTCATCACCCACTATGTTCCTCAAGACTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp GGAAAGGAATTTCTTCAGCATGGAAAAGACATAGAGTaGCCTGTGCAGACACTACCTGAGTGTGAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: GKEFLQHGKDIE*PVQTLPECERH
Trigger: GTGCCTTTCACACTCAGGTAGTGTCTGCACAGGCCACTCTATGTCTTTTCCATGCTGAAGAAATTCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp AACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATaGAAAAGACATAGAGTGGCCTGTGCAGACACTACC +
Preference number: 3 (lower is better)
Translates to: NTDMAWKGISSA*KRHRVACADTT
Trigger: GGTAGTGTCTGCACAGGCCACTCTATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTACCCCAAGTTTaGCCTATGTTCTCTCCAGAA +
Preference number: 3 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRHLPQV*PMFSPE
Trigger: TTCTGGAGAGAACATAGGCAAAACTTGGGGTAAATG...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp TTTAAAGGAACTGTATTGCTGAAGAAACCACAAGCCTaGTTGCAACAGCCTGAGCACATTCTAGCCTGTGAG +
Preference number: 3 (lower is better)
Translates to: FKGTVLLKKPQA*LQQPEHILACE
Trigger: CTCACAGGCTAGAATGTGCTCAGGCTGTTGCAACCAGGCTTGTGGTTTCTTCAGCAATACAGTTCCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 3 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
3UTR-3UTR CAA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCCAAGTCTATTGGAATaGACTCCTCAGCAAGGATCA +
Preference number: 3 (lower is better)
Translates to: ANEGTILIITFLIAPKGFPSLLE*TPQQGS
Trigger: TGATCCTTGCTGAGGAGTCAATTCCAATAGACTTGG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp AATTTCCTGTGTGGCAGGAGGAACACAGACATGGCCTaGAAAGGAATTTCTTCAGCATGGAAAAGACATAGA +
Preference number: 3 (lower is better)
Translates to: NFLCGRRNTDMA*KGISSAWKRHR
Trigger: TCTATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCCACACAGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATATATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 3 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
3UTR-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAGTCTGGCTAAGACCTaGGGACCATATTCCTTGGGA +
Preference number: 3 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKSLAKT*GPYSLG
Trigger: TCCCAAGGAATATGGTCCCAAGGTCTTAGCCAGACT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp CACCTTCTGTTAAGAGTTCTCTCTAGCCTACAGAGATaGGTCAATTGGTGCAGGTCACATTATGAGTCATGT +
Preference number: 3 (lower is better)
Translates to: HLLLRVLSSLQR*VNWCRSHYESC
Trigger: ACATGACTCATAATGTGACCTGCACCAATTGACTCATCTCTGTAGGCTAGAGAGAACTCTTAACAGAAGGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR TCA 72 bp GAAGGAAGATTAACTAAGGCAGTAGGAATAGAGAGGTaGAACTGGGCTGAGATCTTCATGAGAGTGAATCAC +
Preference number: 3 (lower is better)
Translates to: EGRLTKAVGIER*NWAEIFMRVNH
Trigger: GTGATTCACTCTCATGAAGATCTCAGCCCAGTTTCACCTCTCTATTCCTACTGCCTTAGTTAATCTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGCCCCAAAAGGCTTCTaGGTAGGGATTCATTTCTCT +
Preference number: 3 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKAPKGF*VGIHFS
Trigger: AGAGAAATGAATCCCTACCAAGAAGCCTTTTGGGGC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CCA 72 bp ATTTTCCACATCTGTGGTCATGGGGAACGTGAGAGTTaGGTAAAGTTCCATTATAGAGCCATAAAGGAAATG +
Preference number: 3 (lower is better)
Translates to: IFHICGHGERES*VKFHYRAIKEM
Trigger: CATTTCCTTTATGGCTCTATAATGGAACTTTACCCAACTCTCACGTTCCCCATGACCACAGATGTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGAATACTCACTAGATTaGGAAAGTAAGAGCACAGCG +
Preference number: 3 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKEYSLD*ESKSTA
Trigger: CGCTGTGCTCTTACTTTCCAAATCTAGTGAGTATTC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGGGTGGCCATCTAAATaGACTGAGAGTCCTATAATT +
Preference number: 3 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKGWPSK*TESPII
Trigger: AATTATAGGACTCTCAGTCAATTTAGATGGCCACCC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTTGCTGTTGCCTTCCTaGACTGGAGAGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKLLLPS*TGETRV
Trigger: TACCCTGGTCTCTCCAGTTCAGGAAGGCAACAGCAA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGTCTGCCATTCAATGTaGCCCTGGACAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKVCHSM*PWTIWR
Trigger: CCTCCAGATTGTCCAGGGCCACATTGAATGGCAGAC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAAGATTGGTGTCTCCTaGGCTTGTCTGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKKIGVS*ACLAPS
Trigger: AGAAGGTGCCAGACAAGCCCAGGAGACACCAATCTT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTCTAGCCTACAGAGATaGGTCAATTGGTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKSSLQR*VNWCRS
Trigger: TGACCTGCACCAATTGACTCATCTCTGTAGGCTAGA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAGACAGGACCCTGGCCTaGCTCTGGTGGGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRDRTLA*LWWVQS
Trigger: GGACTGCACCCACCAGAGTCAGGCCAGGGTCCTGTC...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATGGTGGCCCACTTCTaGGCCCGCCGTCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDMVAHF*ARRPRS
Trigger: GGAGCGGGGACGGCGGGCGCAGAAGTGGGCCACCAT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR GCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGCGCCCACCTCGAGCCTaGAGGAGAGGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRRPPRA*RRGDPE
Trigger: CTCGGGGTCCCCTCTCCTGCAGGCTCGAGGTGGGCG...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR GCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKVVHDH*IERRGG
Trigger: ACCACCCCTTCTTTCAATGCAATGGTCGTGAACAAC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGCTCTGCATACCACATTaGAGAACTGGTATGGGACTT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKLCIPH*RTGMGL
Trigger: AAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAG...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACGCCCACCTCGAGCCTaGAGGAGAGGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLRPPRA*RRGDPE
Trigger: CTCGGGGTCCCCTCTCCTGCAGGCTCGAGGTGGGCG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGCCCAGAGCTCAAGGCTaGAATTGCTACTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKPRAQG*NCYCLN
Trigger: ATTAAGACAGTAGCAATTCCAGCCTTGAGCTCTGGG...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGATGATGTGGTGGTTCTaGAGACTCAGGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKMMWWF*RLRILW
Trigger: CCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKIAELV*DLLKQP
Trigger: AGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAAT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAGAGCAGACAGGACCCTaGCCTGACTCTGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKREQTGP*PDSGGC
Trigger: GCACCCACCAGAGTCAGGCCAGGGTCCTGTCTGCTC...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCGTCCCCGCTCCTCGTaGGGGTGTACAAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYRPRSS*GCTSPA
Trigger: GGCCGGACTTGTACACCCGCACGAGGAGCGGGGACG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR GCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATACGTCCCCGCTCCTCGTaGGGGTGTACAAGTCCGGCC +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIRPRSS*GCTSPA
Trigger: GGCCGGACTTGTACACCCGCACGAGGAGCGGGGACG...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGAACACAGACATGGCCTaGAAAGGAATTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKNTDMA*KGISSA
Trigger: TGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTT...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGCCTCCCTGCTCCCGTaGCAGCTATCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFASLLP*QLSHQL
Trigger: CAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTATGGTGGCCCACTTCTaGGCCCGCCGTCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVMVAHF*ARRPRS
Trigger: GGAGCGGGGACGGCGGGCGCAGAAGTGGGCCACCAT...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR GCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTTTGAAAGCCAACTCTaGATACCACATTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKFESQL*IPHCRT
Trigger: AGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCGCCCACCTCGAGCCTaGAGGAGAGGGGACCCCGAG +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMRPPRA*RRGDPE
Trigger: CTCGGGGTCCCCTCTCCTGCAGGCTCGAGGTGGGCG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAGCTCTTGGGGGAGCTTaGGAAAGGGCTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRALGGA*ERAPFT
Trigger: AGTGAAGGGAGCCCTTTCCCAAGCTCCCCCAAGAGC...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGCCTCCCTGCTCCCGTaGCAGCTATCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYASLLP*QLSHQL
Trigger: CAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAGCCTCCCTGCTCCCGTaGCAGCTATCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIASLLP*QLSHQL
Trigger: CAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGC...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGGCCTCCCTGCTCCCGTaGCAGCTATCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWASLLP*QLSHQL
Trigger: CAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGC...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAGCAGGGAAGCCTCCCTaGTCCCGTGACAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQAGKPP*SRDSYL
Trigger: GAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGC...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGCAGGGAAGCCTCCCTaGTCCCGTGACAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVAGKPP*SRDSYL
Trigger: GAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAGTTTCCAGATATGGTaGCCCACTTCTGCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPSFQIW*PTSAPA
Trigger: GGCGGGCGCAGAAGTGGGCCACCATATCTGGAAACT...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGCAAATTACTCATCATTaGCTTCCCTTGCAAACTAAC +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKQITHH*LPLQTN
Trigger: GTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTG...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTACCTATGGGACATCTaGGTAAAGATGTCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: WERAPFTTPTPLRALGVKYLWDI*VKMSKR
Trigger: TCTTTTTGACATCTTTACCCAGATGTCCCATAGGTA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCGCCCAACAGCATGGATaGTCTGTTTGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPAQQHG*SVCREA
Trigger: GGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGC...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGCAGGGAAGCCTCCCTaGTCCCGTGACAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYAGKPP*SRDSYL
Trigger: GAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGGCCGCTCTCCTCGGTaGAGACAGCACAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKGRSPR*RQHREE
Trigger: CTCCTCCCTGTGCTGTCTGCACCGAGGAGAGCGGCC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGGCCATGGGAACAGGTaGCATCACCAAGGGGGACAT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFGHGNR*HHQGGH
Trigger: ATGTCCCCCTTGGTGATGGCACCTGTTCCCATGGCC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCTGCTCCGGCCACCATaGAAAAGTCCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFLLRPP*KSPSSR
Trigger: CCTGGAGGATGGACTTTTCCATGGTGGCCGGAGCAG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRRGPTA*MICLQG
Trigger: TCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCG...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGCCCAACAGCATGGATaGTCTGTTTGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRAQQHG*SVCREA
Trigger: GGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCTCCAGCTTCATCACCTaGGTGGAGAGTGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFSSFIT*VESGNG
Trigger: GCCATTGCCACTCTCCACTCAGGTGATGAAGCTGGA...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCCTCCAAGGATGCTGTaGAAAGGGTCTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPPPRML*KGSHWS
Trigger: GGACCAATGAGACCCTTTGCACAGCATCCTTGGAGG...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCAACAGGGCTGCCACTTaGGAATCCCCTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPNRAAT*ESPPRM
Trigger: CATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATAACAGGGCTGCCACTTaGGAATCCCCTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDNRAAT*ESPPRM
Trigger: CATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAACCACAAGCCTGGTTaGAACAGCCTGAGCACATTC +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRNHKPG*NSLSTF
Trigger: GAATGTGCTCAGGCTGTTGCAACCAGGCTTGTGGTT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATACTGCTCCGGCCACCATaGAAAAGTCCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDILLRPP*KSPSSR
Trigger: CCTGGAGGATGGACTTTTCCATGGTGGCCGGAGCAG...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCTGCTCCGGCCACCATaGAAAAGTCCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGLLRPP*KSPSSR
Trigger: CCTGGAGGATGGACTTTTCCATGGTGGCCGGAGCAG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAATGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACG +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQWPWTI*RVRLFT
Trigger: CGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCA...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCGTCTGCCATTCAATGTaGCCCTGGACAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPVCHSM*PWTIWR
Trigger: CCTCCAGATTGTCCAGGGCCACATTGAATGGCAGAC...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAGTCTGGCTAAGACCTTaGGACCATATTCCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRVWLRP*DHIPWE
Trigger: CTCCCAAGGAATATGGTCCCAAGGTCTTAGCCAGAC...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGAGAGAACTGCCTGCTaGGCATGGTGGCTCATACCT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFERTAC*AWWLIP
Trigger: AGGTATGAGCCACCATGCCCAGCAGGCAGTTCTCTC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCAACAGCATGTGTGGTaGGGTCATCTTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPQQHVW*GHLSRL
Trigger: CAGTCTGGAAAGATGACCTCACCACACATGCTGTTG...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTGGTATGGGACTTGCTaGAACAGCCTATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPWYGTC*NSLWLT
Trigger: TGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACTACCCCCACTCCCTTaGGAGCCCTGGGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKLPPLP*EPWESR
Trigger: TCTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTGCAGGGAAGCCTCCCTaGTCCCGTGACAGCTATCTC +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVAGKPP*SRDSYL
Trigger: GAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGC...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCTCCAAGGATGCTGTaGAAAGGGTCTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPPPRML*KGSHWS
Trigger: GGACCAATGAGACCCTTTGCACAGCATCCTTGGAGG...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCCCTCCAAGGATGCTGTaGAAAGGGTCTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVPPRML*KGSHWS
Trigger: GGACCAATGAGACCCTTTGCACAGCATCCTTGGAGG...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCATTAATCAACAGGGCTaGCACTTGCGAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPINQQG*HLRIPS
Trigger: GGAGGGGATTCGCAAGTGGCAGCCCTGTTGATTAAT...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAGTAGTGGGTGGGGATTaGAGAGAAGCCAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQVVGGD*REASFR
Trigger: CCTAAAGCTGGCTTCTCTGCAATCCCCACCCACTAC...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACTCGGAGGCGGAGGTTaGAGTGAGCCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKLGGGG*SEPRWC
Trigger: GCACCATCTTGGCTCACTGCAACCTCCGCCTCCGAG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAGGCCTGCAGGAAAGATaGCAACCAGGAGATGCCATT +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQGLQER*QPGDAI
Trigger: AATGGCATCTCCTGGTTGGCATCTTTCCTGCAGGCC...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACAACCCTCCCCACAATaGCTCTCCCAGCATAGACAA +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQQPSPQ*LSQHRQ
Trigger: TTGTCTATGCTGGGAGAGGCATTGTGGGGAGGGTTG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTGTAGTTTCCAGATATaGTGGCCCACTTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDCSFQI*WPTSAP
Trigger: GGGCGCAGAAGTGGGCCACCATATCTGGAAACTACA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACG +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLWPWTI*RVRLFT
Trigger: CGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWWPWTI*RVRLFT
Trigger: CGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACG +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGWPWTI*RVRLFT
Trigger: CGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSHSMWP*TIWRVR
Trigger: CCTGACCCTCCAGATTGTCCAGGGCCACATTGAATG...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRHSMWP*TIWRVR
Trigger: CCTGACCCTCCAGATTGTCCAGGGCCACATTGAATG...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAGTGGAGAGTGGCAATaGCTGGAGAAGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHSGEWQ*LEKSLE
Trigger: CTCCAGAGACTTCTCCAGCCATTGCCACTCTCCACT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATGCTTCATCACCTGAGTaGAGAGTGGCAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHASSPE*RVAMAG
Trigger: TCCAGCCATTGCCACTCTCCACTCAGGTGATGAAGC...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTGCTGTTGCCTTCCTaGACTGGAGAGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGLLLPS*TGETRV
Trigger: TACCCTGGTCTCTCCAGTTCAGGAAGGCAACAGCAA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATACAACAGCATGTGTGGTaGGGTCATCTTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIQQHVW*GHLSRL
Trigger: CAGTCTGGAAAGATGACCTCACCACACATGCTGTTG...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCAACAGCATGTGTGGTaGGGTCATCTTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFQQHVW*GHLSRL
Trigger: CAGTCTGGAAAGATGACCTCACCACACATGCTGTTG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCAACAGCATGTGTGGTaGGGTCATCTTTCCAGACTG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDQQHVW*GHLSRL
Trigger: CAGTCTGGAAAGATGACCTCACCACACATGCTGTTG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTGGTATGGGACTTGCTaGAACAGCCTATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDWYGTC*NSLWLT
Trigger: TGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATATGGTATGGGACTTGCTaGAACAGCCTATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIWYGTC*NSLWLT
Trigger: TGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCA...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGGCAGAAGAAGCCTGTaGGTACTTCAGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRGRRSL*VLQPQT
Trigger: TGTTTGAGGCTGAAGTACTCACAGGCTTCTTCTGCC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAGTCTCTGGAGCAGGTaGGGACCACTACCCAAGACC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKSLWSR*GPLPKT
Trigger: GGTCTTGGGTAGTGGTCCTCACCTGCTCCAGAGACT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTTTTCATTGTAAGCTaGTGCTCCGGCCACCATGGA +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPFFIVS*CSGHHG
Trigger: TCCATGGTGGCCGGAGCAGCAGCTTACAATGAAAAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATAATTACATCTGCCGTCTaGCATTCAATGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIITSAV*HSMWPW
Trigger: CCAGGGCCACATTGAATGGCAGACGGCAGATGTAAT...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAATTACATCTGCCGTCTaGCATTCAATGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQITSAV*HSMWPW
Trigger: CCAGGGCCACATTGAATGGCAGACGGCAGATGTAAT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATTACATCTGCCGTCTaGCATTCAATGTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDITSAV*HSMWPW
Trigger: CCAGGGCCACATTGAATGGCAGACGGCAGATGTAAT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCTATGGCTCACAGGTTaGCTGTGCAGTTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPLWLTG*LCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAG...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGCCTCCAAGGATGCTGTaGAAAGGGTCTCATTGGTCC +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWPPRML*KGSHWS
Trigger: GGACCAATGAGACCCTTTGCACAGCATCCTTGGAGG...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTAACAGGGCTGCCACTTaGGAATCCCCTCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIINRAAT*ESPPRM
Trigger: CATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTT...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATAATTAATCAACAGGGCTaGCACTTGCGAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIINQQG*HLRIPS
Trigger: GGAGGGGATTCGCAAGTGGCAGCCCTGTTGATTAAT...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATTAATCAACAGGGCTaGCACTTGCGAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSINQQG*HLRIPS
Trigger: GGAGGGGATTCGCAAGTGGCAGCCCTGTTGATTAAT...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCCTGACTCTGGTGGGTaGAGTCCCTCATCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMPDSGG*SPSSSF
Trigger: GAAGCTGGATGAGGGACTGCACCCACCAGAGTCAGG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGAGTACGAAGGAAGCTaGAGAGCTACTTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPREYEGS*RATSRA
Trigger: AGCTCTGGAAGTAGCTCTCCAGCTTCCTTCGTACTC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTGTAGTTTCCAGATATaGTGGCCCACTTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGCSFQI*WPTSAP
Trigger: GGGCGCAGAAGTGGGCCACCATATCTGGAAACTACA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTCTGCTCCGGCCACCATaGAAAAGTCCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGLLRPP*KSPSSR
Trigger: CCTGGAGGATGGACTTTTCCATGGTGGCCGGAGCAG...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCTGCTCCGGCCACCATaGAAAAGTCCATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHLLRPP*KSPSSR
Trigger: CCTGGAGGATGGACTTTTCCATGGTGGCCGGAGCAG...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGTTGCCTTCCTGAACTaGAGAGACCAGGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVVAFLN*RDQGRD
Trigger: ATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAAC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLRGPTA*MICLQG
Trigger: TCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGTCTGCCATTCAATGTaGCCCTGGACAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLVCHSM*PWTIWR
Trigger: CCTCCAGATTGTCCAGGGCCACATTGAATGGCAGAC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGGTCTGCCATTCAATGTaGCCCTGGACAATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWVCHSM*PWTIWR
Trigger: CCTCCAGATTGTCCAGGGCCACATTGAATGGCAGAC...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATACTCTTTTCTCCTCTCTaGTTGACTGGGGGACACTGT +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDILFSPL*LTGGHC
Trigger: ACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAAGAG...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRRLRIL*IHAWAS
Trigger: TGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCT...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHRLRIL*IHAWAS
Trigger: TGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CAA 72 bp GTACTCCAAATAACAACAGCTTCAGTGGTAGCAAGATaGGTGTCTCCTGGGCTTGTCTGGCACCTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: VLQITTASVVAR*VSPGLVWHLLL
Trigger: TAACAGAAGGTGCCAGACAAGCCCAGGAGACACCAATCTTGCTACCACTGAAGCTGTTGTTATTTGGAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCAGCTATCTCACCAGCTaGCACTTTACCATATCTGGC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFSYLTS*HFTISG
Trigger: GCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCAGCTATCTCACCAGCTaGCACTTTACCATATCTGGC +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPSYLTS*HFTISG
Trigger: GCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGCCCAACAGCATGGATaGTCTGTTTGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKAQQHG*SVCREA
Trigger: GGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTGCCCAACAGCATGGATaGTCTGTTTGCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGAQQHG*SVCREA
Trigger: GGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGC...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHTNWDR*NCLAFV
Trigger: CACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATGGTATGGGACTTGCTaGAACAGCCTATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLWYGTC*NSLWLT
Trigger: TGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGGCAGAAGAAGCCTGTaGGTACTTCAGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLGRRSL*VLQPQT
Trigger: TGTTTGAGGCTGAAGTACTCACAGGCTTCTTCTGCC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAGGCAGAAGAAGCCTGTaGGTACTTCAGCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIGRRSL*VLQPQT
Trigger: TGTTTGAGGCTGAAGTACTCACAGGCTTCTTCTGCC...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTCAACCACACTGTCATaGCCATCTATAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDSTTLS*PSIAPG
Trigger: TCCTGGAGCTATAGATGGTCATGACAGTGTGGTTGA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATACATGTCCACAAATACTaGGGTATAGCCTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIHVHKY*GIACMP
Trigger: TGGCATGCAGGCTATACCTCAGTATTTGTGGACATG...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAACACTTTGGGAGGCTaGGGTGGACGGATCACGAGT +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKNTLGG*GGRITS
Trigger: ACTCGTGATCCGTCCACCTCAGCCTCCCAAAGTGTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTCATTGTAAGCTGCTaGTCCGGCCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHFIVSC*SGHHGK
Trigger: TTTTCCATGGTGGCCGGAGCAGCAGCTTACAATGAA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTTCATTGTAAGCTGCTaGTCCGGCCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRFIVSC*SGHHGK
Trigger: TTTTCCATGGTGGCCGGAGCAGCAGCTTACAATGAA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCTTTTTCATTGTAAGCTaGTGCTCCGGCCACCATGGA +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFFFIVS*CSGHHG
Trigger: TCCATGGTGGCCGGAGCAGCAGCTTACAATGAAAAA...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTTTTTCATTGTAAGCTaGTGCTCCGGCCACCATGGA +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDFFIVS*CSGHHG
Trigger: TCCATGGTGGCCGGAGCAGCAGCTTACAATGAAAAA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTTTTTCATTGTAAGCTaGTGCTCCGGCCACCATGGA +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVFFIVS*CSGHHG
Trigger: TCCATGGTGGCCGGAGCAGCAGCTTACAATGAAAAA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGGCAGAGATTTGCTGTTaGCTTCCTGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSAEICC*LPELER
Trigger: TCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGC...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGCAGAGATTTGCTGTTaGCTTCCTGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVAEICC*LPELER
Trigger: TCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAAGATCTTCATTGGCTaGATTCACCACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRKIFIG*IHHSIN
Trigger: GTTGATGCTGTGGTGAATGCAGCCAATGAAGATCTT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGGATTCTTTGGATCCATaGGTGGGCCTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSDSLDP*VGLIHL
Trigger: GAGATGTATGAGGCCCACGCATGGATCCAAAGAATC...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGCTATGGCTCACAGGTTaGCTGTGCAGTTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSLWLTG*LCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAG...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCTATGGCTCACAGGTTaGCTGTGCAGTTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDLWLTG*LCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCAATCCCCTCCAAGGATaGTGTGCAAAGGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPNPLQG*CAKGLI
Trigger: AATGAGACCCTTTGCACAGCATCCTTGGAGGGGATT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGAATCCCCTCCAAGGATaGTGTGCAAAGGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSNPLQG*CAKGLI
Trigger: AATGAGACCCTTTGCACAGCATCCTTGGAGGGGATT...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGATTAATCAACAGGGCTaGCACTTGCGAATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWINQQG*HLRIPS
Trigger: GGAGGGGATTCGCAAGTGGCAGCCCTGTTGATTAAT...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGAGTACGAAGGAAGCTaGAGAGCTACTTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLEYEGS*RATSRA
Trigger: AGCTCTGGAAGTAGCTCTCCAGCTTCCTTCGTACTC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAGTTGCCTTCCTGAACTaGAGAGACCAGGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLVAFLN*RDQGRD
Trigger: ATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAAC...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIHSMWP*TIWRVR
Trigger: CCTGACCCTCCAGATTGTCCAGGGCCACATTGAATG...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCTCTTTTCTCCTCTCTaGTTGACTGGGGGACACTGT +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGLFSPL*LTGGHC
Trigger: ACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAAGAG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTACTCTTTTCTCCTCTCTaGTTGACTGGGGGACACTGT +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLLFSPL*LTGGHC
Trigger: ACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAAGAG...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACTTTGGATCCATGCGTaGGCCTCATACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLLWIHA*ASYISS
Trigger: GGAAGAGATGTATGAGGCCCACGCATGGATCCAAAG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCTTTGGATCCATGCGTaGGCCTCATACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYLWIHA*ASYISS
Trigger: GGAAGAGATGTATGAGGCCCACGCATGGATCCAAAG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIRLRIL*IHAWAS
Trigger: TGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCATGATGTGGTGGTTCTaGAGACTCAGGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPMMWWF*RLRILW
Trigger: CCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPIAELV*DLLKQP
Trigger: AGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAAT...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACGGATCACGAGTAGCTaGAGATCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKRITSS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCCAGCTACTCGTGATCCG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACAGCATGTAGATAAGTaGTGTGAGCCAGTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQQHVDK*CEPVAV
Trigger: AACAGCCACTGGCTCACACCACTTATCTACATGCTG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CAA 72 bp AAAGGAACTGTATTGCTGAAGAAACCACAAGCCTGGTaGCAACAGCCTGAGCACATTCTAGCCTGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KGTVLLKKPQAW*QQPEHILACEK
Trigger: TTTCTCACAGGCTAGAATGTGCTCAGGCTGTTGCAACCAGGCTTGTGGTTTCTTCAGCAATACAGTTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACTTGCTGTTGCCTTCCTaGACTGGAGAGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHLLLPS*TGETRV
Trigger: TACCCTGGTCTCTCCAGTTCAGGAAGGCAACAGCAA...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTAGCTATCTCACCAGCTaGCACTTTACCATATCTGGC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGSYLTS*HFTISG
Trigger: GCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCT...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTCACGACCATTGCATTaGAAGAAGGGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVSRPLH*KKGWFL
Trigger: AAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWTNWDR*NCLAFV
Trigger: CACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGT...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDITNWDR*NCLAFV
Trigger: CACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGCATGTCCACAAATACTaGGGTATAGCCTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWHVHKY*GIACMP
Trigger: TGGCATGCAGGCTATACCTCAGTATTTGTGGACATG...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCATTCAAGCCACTCTTTaGGCCATCGATGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPIQATL*AIDGHY
Trigger: ATAATGACCATCGATGGCTCAAAGAGTGGCTTGAAT...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGCCAATGATGAGGCATTaGCACCTACCGCAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLPMMRH*HLPQGV
Trigger: GACACCTTGCGGTAGGTGTCAATGCCTCATCATTGG...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCAATCACAGTCACAAATaGTCCCTTCCCCACAACAAC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFNHSHK*SLPHNN
Trigger: GTTGTTGTGGGGAAGGGATCATTTGTGACTGTGATT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAAAGGAGAAAAACAGTaGACCGTAGTTCTTACTGCT +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRKGEKQ*TVVLTA
Trigger: AGCAGTAAGAACTACGGTTCACTGTTTTTCTCCTTT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAATCTTCATTAGTGACTaGGGAGTAGAGGGGGCAATA +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQIFISD*GVEGAI
Trigger: TATTGCCCCCTCTACTCCTCAGTCACTAATGAAGAT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGATCTCCCCTTTCAACATaGGAGTTTTCATTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRSPLST*EFSLQF
Trigger: AAACTGCAATGAAAACTCTCATGTTGAAAGGGGAGA...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTCATTGTAAGCTGCTaGTCCGGCCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWFIVSC*SGHHGK
Trigger: TTTTCCATGGTGGCCGGAGCAGCAGCTTACAATGAA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTCATTGTAAGCTGCTaGTCCGGCCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGFIVSC*SGHHGK
Trigger: TTTTCCATGGTGGCCGGAGCAGCAGCTTACAATGAA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTGCAGAGATTTGCTGTTaGCTTCCTGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGAEICC*LPELER
Trigger: TCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGC...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATACACTTGCAGAGATTTaGTGTTGCCTTCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDTLAEI*CCLPEL
Trigger: CAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCACACTTGCAGAGATTTaGTGTTGCCTTCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFTLAEI*CCLPEL
Trigger: CAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCACACTTGCAGAGATTTaGTGTTGCCTTCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPTLAEI*CCLPEL
Trigger: CAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATATCATTGGCTTCCCTTaGAAACTAACCCGGATAGTC +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHIIGFP*KLTRIV
Trigger: GACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGAT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATCATTGGCTTCCCTTaGAAACTAACCCGGATAGTC +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSIIGFP*KLTRIV
Trigger: GACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGAT...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRVVHDH*IERRGG
Trigger: ACCACCCCTTCTTTCAATGCAATGGTCGTGAACAAC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGATTCTTTGGATCCATaGGTGGGCCTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLDSLDP*VGLIHL
Trigger: GAGATGTATGAGGCCCACGCATGGATCCAAAGAATC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTGATTCTTTGGATCCATaGGTGGGCCTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGDSLDP*VGLIHL
Trigger: GAGATGTATGAGGCCCACGCATGGATCCAAAGAATC...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCTATGGCTCACAGGTTaGCTGTGCAGTTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYLWLTG*LCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACAATCCCCTCCAAGGATaGTGTGCAAAGGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYNPLQG*CAKGLI
Trigger: AATGAGACCCTTTGCACAGCATCCTTGGAGGGGATT...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATGGCCCACTTTTTCTTTaGATAGTCTACTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHGPLFL*IVYSQG
Trigger: CCCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCC...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAATTTACCCCAAGTTTTaGCTATGTTCTCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRIYPKF*LCSLQN
Trigger: GTTCTGGAGAGAACATAGGCAAAACTTGGGGTAAAT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAAATACAAAAATTAACTaGACGTGGTGGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRNTKIN*TWWHMP
Trigger: AGGCATGTGCCACCACGTGCAGTTAATTTTTGTATT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGCTTTAAGAGAGAACTaGCTGCTGGGCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKALREN*LLGMVA
Trigger: AGCCACCATGCCCAGCAGGCAGTTCTCTCTTAAAGC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAATGCCAACCAGGAGATaGCATTTGTACTATGTCTTA +
Preference number: 4 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRMPTRR*HLYYVL
Trigger: TAAGACATAGTACAAATGGCATCTCCTGGTTGGCAT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATGCAGAAGATCTTCATTaGCTGCATTCACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDAEDLH*LHSPQH
Trigger: ATGCTGTGGTGAATGCAGCCAATGAAGATCTTCTGC...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGCAGAAGATCTTCATTaGCTGCATTCACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFAEDLH*LHSPQH
Trigger: ATGCTGTGGTGAATGCAGCCAATGAAGATCTTCTGC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTCGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGRGPTA*MICLQG
Trigger: TCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCG...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVRGPTA*MICLQG
Trigger: TCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCG...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCCCAGAGCTCAAGGCTaGAATTGCTACTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDPRAQG*NCYCLN
Trigger: ATTAAGACAGTAGCAATTCCAGCCTTGAGCTCTGGG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGCCCAGAGCTCAAGGCTaGAATTGCTACTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRPRAQG*NCYCLN
Trigger: ATTAAGACAGTAGCAATTCCAGCCTTGAGCTCTGGG...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMHSMWP*TIWRVR
Trigger: CCTGACCCTCCAGATTGTCCAGGGCCACATTGAATG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTCAAACTCAGCATCTTaGACCTCTTTGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPSNSAS*TSLPFQ
Trigger: CTGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATAATGATGTGGTGGTTCTaGAGACTCAGGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIMMWWF*RLRILW
Trigger: CCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTCTCAATGATGTGGTaGTTCTGGAGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPFSMMW*FWRLRI
Trigger: AATCCTGAGTCTCCAGAACCACCACATCATTGAGAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTAACGGATGTCCCTaGCAGAAGAAGCCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLFNGCP*QKKPVS
Trigger: ACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCAAAGGTTTCAGGGCTaGAGACATTGTCAACCACAC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGQRFQG*RHCQPH
Trigger: GTGTGGTTGACAATGTCTCCAGCCCTGAAACCTTTG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTACAAAGGTTTCAGGGCTaGAGACATTGTCAACCACAC +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLQRFQG*RHCQPH
Trigger: GTGTGGTTGACAATGTCTCCAGCCCTGAAACCTTTG...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGGAGGAACACAGACATaGCCTGGAAAGGAATTTCTT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFGGTQT*PGKEFL
Trigger: AAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCACCTGAGTGGAGAGTaGCAATGGCTGGAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMHLSGE*QWLEKS
Trigger: AGACTTCTCCAGCCATTGCCACTCTCCACTCAGGTG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATATTTCTGAAACAAGAGTaGGAGCGAGGTAATCCTACC +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIFLKQE*ERGNPT
Trigger: GGTAGGATTACCTCGCTCTCACTCTTGTTTCAGAAA...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360356.6
CDS-3UTR TCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGAGTCAGCATTTTTCTaGACACTTGCAGAGATTTGC +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVESAFF*TLAEIC
Trigger: GCAAATCTCTGCAAGTGTTCAGAAAAATGCTGACTC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCAAATTCAGAGGGAACTaGAAAATCCCAGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPKFRGN*KIPELK
Trigger: CTTGAGCTCTGGGATTTTTCAGTTCCCTCTGAATTT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCAAATTCAGAGGGAACTaGAAAATCCCAGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFKFRGN*KIPELK
Trigger: CTTGAGCTCTGGGATTTTTCAGTTCCCTCTGAATTT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATAAATTCAGAGGGAACTaGAAAATCCCAGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDKFRGN*KIPELK
Trigger: CTTGAGCTCTGGGATTTTTCAGTTCCCTCTGAATTT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTATCACGACCATTGCATTaGAAGAAGGGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLSRPLH*KKGWFL
Trigger: AAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGA...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGTGGTATGGGACTTGCTaGAACAGCCTATGGCTCACA +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMWYGTC*NSLWLT
Trigger: TGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCA...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTCAACCACACTGTCATaGCCATCTATAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIISTTLS*PSIAPG
Trigger: TCCTGGAGCTATAGATGGTCATGACAGTGTGGTTGA...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCAAGAGCACCAGTCTCTaGTTTTTCATTGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFKSTSL*FFIVSC
Trigger: GCAGCTTACAATGAAAAATCAGAGACTGGTGCTCTT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATCTTTTAATTAAGGGATaGGGACGGTTCAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHLLIKG*GRFSAV
Trigger: AACAGCACTGAACCGTCCTCATCCCTTAATTAAAAG...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACAAGTCTATTGGAATTaGCTCCTCAGCAAGGATCAT +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQQVYWN*LLSKDH
Trigger: ATGATCCTTGCTGAGGAGTCAATTCCAATAGACTTG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACACACTTGCAGAGATTTaGTGTTGCCTTCCTGAACTG +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYTLAEI*CCLPEL
Trigger: CAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGT...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAGCTCAAGGCTGGAATTaGTACTGTCTTAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQAQGWN*YCLNVS
Trigger: ACTCACATTAAGACAGTAGCAATTCCAGCCTTGAGC...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTATCATTGGCTTCCCTTaGAAACTAACCCGGATAGTC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGIIGFP*KLTRIV
Trigger: GACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGAT...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAATCATTGGCTTCCCTTaGAAACTAACCCGGATAGTC +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIIIGFP*KLTRIV
Trigger: GACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGAT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGVVHDH*IERRGG
Trigger: ACCACCCCTTCTTTCAATGCAATGGTCGTGAACAAC...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACATCTTGGACCTCTTTaGCATTTCAGAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQHLGPL*HFRTES
Trigger: GCTTTCAGTTCTGAAATGGCAAAGAGGTCCAAGATG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCATCTTGGACCTCTTTaGCATTTCAGAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDHLGPL*HFRTES
Trigger: GCTTTCAGTTCTGAAATGGCAAAGAGGTCCAAGATG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCTCACAGGTTGCCTGTaGAGTTTTTCTTCCATCATT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFLTGCL*SFSSII
Trigger: AATGATGGAAGAAAAACTGCACAGGCAACCTGTGAG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCCTCACAGGTTGCCTGTaGAGTTTTTCTTCCATCATT +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVLTGCL*SFSSII
Trigger: AATGATGGAAGAAAAACTGCACAGGCAACCTGTGAG...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCTCACAGGTTGCCTGTaGAGTTTTTCTTCCATCATT +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDLTGCL*SFSSII
Trigger: AATGATGGAAGAAAAACTGCACAGGCAACCTGTGAG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTACTCTGCATACCACATTaGAGAACTGGTATGGGACTT +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLLCIPH*RTGMGL
Trigger: AAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAG...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATACTCTGCATACCACATTaGAGAACTGGTATGGGACTT +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDILCIPH*RTGMGL
Trigger: AAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAG...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCTCTGCATACCACATTaGAGAACTGGTATGGGACTT +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGLCIPH*RTGMGL
Trigger: AAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCTCTGCATACCACATTaGAGAACTGGTATGGGACTT +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYLCIPH*RTGMGL
Trigger: AAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTTTCTTGGCCTTCTCTaGCAGGTTTTTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRFLGLL*QVFEVL
Trigger: AAGAACCTCAAAAACCTGGCAGAGAAGGCCAAGAAA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGTACATATTCCTGGGTaGATGTCCACAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRVHIPG*MSTNTE
Trigger: CTCAGTATTTGTGGACATGCACCCAGGAATATGTAC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATAGTACATATTCCTGGGTaGATGTCCACAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIVHIPG*MSTNTE
Trigger: CTCAGTATTTGTGGACATGCACCCAGGAATATGTAC...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGTTGCCTTCCTGAACTaGAGAGACCAGGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKVAFLN*RDQGRD
Trigger: ATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAAC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACGTTGCCTTCCTGAACTaGAGAGACCAGGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHVAFLN*RDQGRD
Trigger: ATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAAC...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGGCAGAAGATCTTCATTaGCTGCATTCACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWAEDLH*LHSPQH
Trigger: ATGCTGTGGTGAATGCAGCCAATGAAGATCTTCTGC...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATACCCAGAGCTCAAGGCTaGAATTGCTACTGTCTTAAT +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIPRAQG*NCYCLN
Trigger: ATTAAGACAGTAGCAATTCCAGCCTTGAGCTCTGGG...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTCAAACTCAGCATCTTaGACCTCTTTGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSSNSAS*TSLPFQ
Trigger: CTGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCTCTTTTCTCCTCTCTaGTTGACTGGGGGACACTGT +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMLFSPL*LTGGHC
Trigger: ACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAAGAG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCTCTTTTCTCCTCTCTaGTTGACTGGGGGACACTGT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVLFSPL*LTGGHC
Trigger: ACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAAGAG...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGCTTTGGATCCATGCGTaGGCCTCATACATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLLWIHA*ASYISS
Trigger: GGAAGAGATGTATGAGGCCCACGCATGGATCCAAAG...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGRLRIL*IHAWAS
Trigger: TGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHRLRIL*IHAWAS
Trigger: TGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCT...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAATGATGTGGTGGTTCTaGAGACTCAGGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIMMWWF*RLRILW
Trigger: CCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAATGATGTGGTGGTTCTaGAGACTCAGGATTCTTTGG +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLMMWWF*RLRILW
Trigger: CCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTCTCAATGATGTGGTaGTTCTGGAGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHFSMMW*FWRLRI
Trigger: AATCCTGAGTCTCCAGAACCACCACATCATTGAGAA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATATTCTCAATGATGTGGTaGTTCTGGAGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIFSMMW*FWRLRI
Trigger: AATCCTGAGTCTCCAGAACCACCACATCATTGAGAA...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLIAELV*DLLKQP
Trigger: AGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAAT...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTTTAACGGATGTCCCTaGCAGAAGAAGCCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIFNGCP*QKKPVS
Trigger: ACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAA...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGAGTAGAAGTAGTGGGTaGGGATTGCAGAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMSRSSG*GLQRSQ
Trigger: CTGGCTTCTCTGCAATCCCCACCCACTACTTCTACT...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAGAGAAGATAAAGAATaGGCAACAGGTGAACTCGTG +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHREDKE*ATGELV
Trigger: CACGAGTTCACCTGTTGCCCATTCTTTATCTTCTCT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGGGGAACGTGAGAGTTaGGTAAAGTTCCATTATAGA +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFGERES*VKFHYR
Trigger: TCTATAATGGAACTTTACCCAACTCTCACGTTCCCC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCGAGGTAATCCTACCTaGTTTTTCATTGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGRGNPT*FFIVSC
Trigger: GCAGCTTACAATGAAAAATCAGGTAGGATTACCTCG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360356.6
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGGAGTCAGCATTTTTCTaGACACTTGCAGAGATTTGC +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWESAFF*TLAEIC
Trigger: GCAAATCTCTGCAAGTGTTCAGAAAAATGCTGACTC...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGAGTCAGCATTTTTCTaGACACTTGCAGAGATTTGC +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLESAFF*TLAEIC
Trigger: GCAAATCTCTGCAAGTGTTCAGAAAAATGCTGACTC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACAGCTATCTCACCAGCTaGCACTTTACCATATCTGGC +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHSYLTS*HFTISG
Trigger: GCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCT...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVTNWDR*NCLAFV
Trigger: CACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGT...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTGCCATTTCAGAACTaGAAGCCTTATATATCTCCA +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPLPFQN*KPYISP
Trigger: TGGAGATATATAAGGCTTTCAGTTCTGAAATGGCAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTATGATTATTCTCAATaGTGTGGTGGTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSYDYSQ*CGGSGD
Trigger: GTCTCCAGAACCACCACATCATTGAGAATAATCATA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCTATGATTATTCTCAATaGTGTGGTGGTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFYDYSQ*CGGSGD
Trigger: GTCTCCAGAACCACCACATCATTGAGAATAATCATA...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTCAACCACACTGTCATaGCCATCTATAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVSTTLS*PSIAPG
Trigger: TCCTGGAGCTATAGATGGTCATGACAGTGTGGTTGA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCATGTCCACAAATACTaGGGTATAGCCTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHHVHKY*GIACMP
Trigger: TGGCATGCAGGCTATACCTCAGTATTTGTGGACATG...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAATTCAAGCCACTCTTTaGGCCATCGATGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLIQATL*AIDGHY
Trigger: ATAATGACCATCGATGGCTCAAAGAGTGGCTTGAAT...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAAAGAGCACCAGTCTCTaGTTTTTCATTGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIKSTSL*FFIVSC
Trigger: GCAGCTTACAATGAAAAATCAGAGACTGGTGCTCTT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTAAGAGCACCAGTCTCTaGTTTTTCATTGTAAGCTGC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGKSTSL*FFIVSC
Trigger: GCAGCTTACAATGAAAAATCAGAGACTGGTGCTCTT...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTCCAAAATACTTTGTaGCCTGGGTCATCATTTGTG +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHFQNTL*PGSSFV
Trigger: CACAAATGATGACCCAGGTCACAAAGTATTTTGGAA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATATTCAGCTTGGAGGATaGACATGCTCAAAAATTTCC +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHIQLGG*TCSKIS
Trigger: GGAAATTTTTGAGCATGTTCATCCTCCAAGCTGAAT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTTCATTGTAAGCTGCTaGTCCGGCCACCATGGAAAA +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVFIVSC*SGHHGK
Trigger: TTTTCCATGGTGGCCGGAGCAGCAGCTTACAATGAA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTTTTTTCATTGTAAGCTaGTGCTCCGGCCACCATGGA +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGFFIVS*CSGHHG
Trigger: TCCATGGTGGCCGGAGCAGCAGCTTACAATGAAAAA...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGCAGAGATTTGCTGTTaGCTTCCTGAACTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKAEICC*LPELER
Trigger: TCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACAAGATCTTCATTGGCTaGATTCACCACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYKIFIG*IHHSIN
Trigger: GTTGATGCTGTGGTGAATGCAGCCAATGAAGATCTT...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGCTCAAGGCTGGAATTaGTACTGTCTTAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYAQGWN*YCLNVS
Trigger: ACTCACATTAAGACAGTAGCAATTCCAGCCTTGAGC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGCTCAAGGCTGGAATTaGTACTGTCTTAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLAQGWN*YCLNVS
Trigger: ACTCACATTAAGACAGTAGCAATTCCAGCCTTGAGC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIVVHDH*IERRGG
Trigger: ACCACCCCTTCTTTCAATGCAATGGTCGTGAACAAC...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATACATCTTGGACCTCTTTaGCATTTCAGAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIHLGPL*HFRTES
Trigger: GCTTTCAGTTCTGAAATGGCAAAGAGGTCCAAGATG...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGATTCTTTGGATCCATaGGTGGGCCTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLDSLDP*VGLIHL
Trigger: GAGATGTATGAGGCCCACGCATGGATCCAAAGAATC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTGATTCTTTGGATCCATaGGTGGGCCTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGDSLDP*VGLIHL
Trigger: GAGATGTATGAGGCCCACGCATGGATCCAAAGAATC...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTCCACCTTTAGAACCTaGAAACCACATTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPSTFRT*KPHFSN
Trigger: GTTTGAAAAATGTGGTTTGCAGGTTCTAAAGGTGGA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACTATGGCTCACAGGTTaGCTGTGCAGTTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKLWLTG*LCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTTTGAAAGCCAACTCTaGATACCACATTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSFESQL*IPHCRT
Trigger: AGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTCTTGGCCTTCTCTaGCAGGTTTTTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWFLGLL*QVFEVL
Trigger: AAGAACCTCAAAAACCTGGCAGAGAAGGCCAAGAAA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGTACATATTCCTGGGTaGATGTCCACAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYVHIPG*MSTNTE
Trigger: CTCAGTATTTGTGGACATGCACCCAGGAATATGTAC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGGTACATATTCCTGGGTaGATGTCCACAAATACTGAG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWVHIPG*MSTNTE
Trigger: CTCAGTATTTGTGGACATGCACCCAGGAATATGTAC...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACAATCCCCTCCAAGGATaGTGTGCAAAGGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHNPLQG*CAKGLI
Trigger: AATGAGACCCTTTGCACAGCATCCTTGGAGGGGATT...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCATGAGAGTTTTCATTaGAGTTTTCCCGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFHESFH*SFPAPF
Trigger: AAAAGGAGCGGGAAAACTGCAATGAAAACTCTCATG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGAAAGGAATGGAGGTATaGAGGAGCACAGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMKGMEV*RSTEEE
Trigger: TTCCTCCTCTGTGCTCCTGCATACCTCCATTCCTTT...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCAAACTCAGCATCTTaGACCTCTTTGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWSNSAS*TSLPFQ
Trigger: CTGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACTCAAACTCAGCATCTTaGACCTCTTTGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYSNSAS*TSLPFQ
Trigger: CTGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGA...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTTTAACGGATGTCCCTaGCAGAAGAAGCCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVFNGCP*QKKPVS
Trigger: ACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACTTTAACGGATGTCCCTaGCAGAAGAAGCCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHFNGCP*QKKPVS
Trigger: ACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAA...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCAAAGGTTTCAGGGCTaGAGACATTGTCAACCACAC +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHQRFQG*RHCQPH
Trigger: GTGTGGTTGACAATGTCTCCAGCCCTGAAACCTTTG...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAGTTTCCAGATATGGTaGCCCACTTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHSFQIW*PTFSLH
Trigger: ATGCAAAGAAAAAGTGGGCCACCATATCTGGAAACT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTGTAGTTTCCAGATATaGTGGCCCACTTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSCSFQI*WPTFSL
Trigger: CAAAGAAAAAGTGGGCCACCATATCTGGAAACTACA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCACTGCTGAAATAATGTaGGAGCTAGGGCCTTATATT +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFTAEIM*ELGPYI
Trigger: AATATAAGGCCCTAGCTCCCACATTATTTCAGCAGT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CAA 72 bp ATATCACTATATAATGAGTATGTTGGGGGCAGTATCTaGCCTTTAAGCTTTAAGAGAGAACTGCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISLYNEYVGGSI*PLSFKRELPAG
Trigger: CCCAGCAGGCAGTTCTCTCTTAAAGCTTAAAGGCAAGATACTGCCCCCAACATACTCATTATATAGTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCTCATTGCTCACCAGGTaGATTTCTTTCAAATTACTC +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFSLLTR*ISFKLL
Trigger: GAGTAATTTGAAAGAAATTCACCTGGTGAGCAATGA...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGTCACGACCATTGCATTaGAAGAAGGGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLSRPLH*KKGWFL
Trigger: AAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGA...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACTCACGACCATTGCATTaGAAGAAGGGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHSRPLH*KKGWFL
Trigger: AAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGA...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTTGCCATTTCAGAACTaGAAGCCTTATATATCTCCA +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVLPFQN*KPYISP
Trigger: TGGAGATATATAAGGCTTTCAGTTCTGAAATGGCAA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTATGATTATTCTCAATaGTGTGGTGGTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWYDYSQ*CGGSGD
Trigger: GTCTCCAGAACCACCACATCATTGAGAATAATCATA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACTATGATTATTCTCAATaGTGTGGTGGTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYYDYSQ*CGGSGD
Trigger: GTCTCCAGAACCACCACATCATTGAGAATAATCATA...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATATGATTATTCTCAATaGTGTGGTGGTTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLYDYSQ*CGGSGD
Trigger: GTCTCCAGAACCACCACATCATTGAGAATAATCATA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACCAAGGTACAGAATATaGTTATTCTCAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQPRYRI*LFSMMW
Trigger: CCACATCATTGAGAATAATCATATTCTGTACCTTGG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCCAAGGTACAGAATATaGTTATTCTCAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDPRYRI*LFSMMW
Trigger: CCACATCATTGAGAATAATCATATTCTGTACCTTGG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGCCAAGGTACAGAATATaGTTATTCTCAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSPRYRI*LFSMMW
Trigger: CCACATCATTGAGAATAATCATATTCTGTACCTTGG...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACTGGGTCATCATTTGTaGCCTCTAAATCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKLGHHL*PLNHSH
Trigger: GTGACTGTGATTTAGAGGTCACAAATGATGACCCAG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAAGGAACTGTATTGCTaGAGAAACCACAAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKKELYC*RNHKPG
Trigger: ACCAGGCTTGTGGTTTCTTCAGCAATACAGTTCCTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGTTTATTCCCTTTTaGGCTTCAAAGCATAGACTG +
Preference number: 4 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSMFIPF*ASKHRL
Trigger: CAGTCTATGCTTTGAAGCGCAAAAGGGAATAAACAT...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAATCCACCTTTAGAACCTaGAAACCACATTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQSTFRT*KPHFSN
Trigger: GTTTGAAAAATGTGGTTTGCAGGTTCTAAAGGTGGA...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTCCACCTTTAGAACCTaGAAACCACATTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVSTFRT*KPHFSN
Trigger: GTTTGAAAAATGTGGTTTGCAGGTTCTAAAGGTGGA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTCCACCTTTAGAACCTaGAAACCACATTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDSTFRT*KPHFSN
Trigger: GTTTGAAAAATGTGGTTTGCAGGTTCTAAAGGTGGA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTCTCACAGGTTGCCTGTaGAGTTTTTCTTCCATCATT +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIILTGCL*SFSSII
Trigger: AATGATGGAAGAAAAACTGCACAGGCAACCTGTGAG...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACTTTGAAAGCCAACTCTaGATACCACATTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYFESQL*IPHCRT
Trigger: AGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAA...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTGAAAGCCAACTCTaGATACCACATTGCAGAACT +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWFESQL*IPHCRT
Trigger: AGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACGGCCCACTTTTTCTTTaGATAGTCTACTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHGPLFL*IVYSQG
Trigger: CCCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCC...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTGGCCCACTTTTTCTTTaGATAGTCTACTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVGPLFL*IVYSQG
Trigger: CCCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCC...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAACATCACTTTCCTGATTaGCCCAAAAGGCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKHHFPD*PKRLLG
Trigger: ACCAAGAAGCCTTTTGGGGCAATCAGGAAAGTGATG...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAACTGCATGTGTAGATaGCTTCTTGCTGCACTCAAC +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKNCMCR*LLAALN
Trigger: GTTGAGTGCAGCAAGAAGGCATCTACACATGCAGTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTGCAGAAGATCTTCATTaGCTGCATTCACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGAEDLH*LHSPQH
Trigger: ATGCTGTGGTGAATGCAGCCAATGAAGATCTTCTGC...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATACACTTTACCATATCTaGCAACAAACTGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDTLYHI*QQTVCS
Trigger: AGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAACACTTTACCATATCTaGCAACAAACTGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQTLYHI*QQTVCS
Trigger: AGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGIAELV*DLLKQP
Trigger: AGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAAT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAAGTTTCCAGATATGGTaGCCCACTTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLSFQIW*PTFSLH
Trigger: ATGCAAAGAAAAAGTGGGCCACCATATCTGGAAACT...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CCA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCAAAGGTTTTACAACATaGAATAGGGAGTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: ANEGTILIITFLIAPKGFKGFTT*NRESSL
Trigger: TAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTT...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAACCCTGCATTCAGCTTaGAGGATGAACATGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKTLHSA*RMNMLK
Trigger: TTTGAGCATGTTCATCCTCCAAGCTGAATGCAGGGT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGAGTCAGCATTTTTCTaGACACTTGCAGAGATTTGC +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLESAFF*TLAEIC
Trigger: GCAAATCTCTGCAAGTGTTCAGAAAAATGCTGACTC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTAAATTCAGAGGGAACTaGAAAATCCCAGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGKFRGN*KIPELK
Trigger: CTTGAGCTCTGGGATTTTTCAGTTCCCTCTGAATTT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTGCCATTTCAGAACTaGAAGCCTTATATATCTCCA +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWLPFQN*KPYISP
Trigger: TGGAGATATATAAGGCTTTCAGTTCTGAAATGGCAA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGCCAAGGTACAGAATATaGTTATTCTCAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWPRYRI*LFSMMW
Trigger: CCACATCATTGAGAATAATCATATTCTGTACCTTGG...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACATTCAAGCCACTCTTTaGGCCATCGATGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHIQATL*AIDGHY
Trigger: ATAATGACCATCGATGGCTCAAAGAGTGGCTTGAAT...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTATTCAAGCCACTCTTTaGGCCATCGATGGTCATTAT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVIQATL*AIDGHY
Trigger: ATAATGACCATCGATGGCTCAAAGAGTGGCTTGAAT...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGAGTGGAAGAATCTACTaGTGTCAGCTCACCAAATTC +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMSGRIY*CQLTKF
Trigger: GAATTTGGTGAGCTGACATCAGTAGATTCTTCCACT...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR GCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTAAGATCTTCATTGGCTaGATTCACCACAGCATCAAC +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGKIFIG*IHHSIN
Trigger: GTTGATGCTGTGGTGAATGCAGCCAATGAAGATCTT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTGCTCAAGGCTGGAATTaGTACTGTCTTAATGTGAGT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVAQGWN*YCLNVS
Trigger: ACTCACATTAAGACAGTAGCAATTCCAGCCTTGAGC...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR GCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTCATCTTGGACCTCTTTaGCATTTCAGAACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGHLGPL*HFRTES
Trigger: GCTTTCAGTTCTGAAATGGCAAAGAGGTCCAAGATG...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTATCCACCTTTAGAACCTaGAAACCACATTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLSTFRT*KPHFSN
Trigger: GTTTGAAAAATGTGGTTTGCAGGTTCTAAAGGTGGA...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCTCACAGGTTGCCTGTaGAGTTTTTCTTCCATCATT +
Preference number: 4 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHLTGCL*SFSSII
Trigger: AATGATGGAAGAAAAACTGCACAGGCAACCTGTGAG...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR GCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTTTCTTGGCCTTCTCTaGCAGGTTTTTGAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVFLGLL*QVFEVL
Trigger: AAGAACCTCAAAAACCTGGCAGAGAAGGCCAAGAAA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGACACTTTACCATATCTaGCAACAAACTGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWTLYHI*QQTVCS
Trigger: AGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGT...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATAACACTTTACCATATCTaGCAACAAACTGTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WLVLSITQSVHTDNPWDITLYHI*QQTVCS
Trigger: AGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGT...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACAAATTACTCATCATTaGCTTCCCTTGCAAACTAAC +
Preference number: 4 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLQITHH*LPLQTN
Trigger: GTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGCAAATTACTCATCATTaGCTTCCCTTGCAAACTAAC +
Preference number: 4 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWQITHH*LPLQTN
Trigger: GTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTG...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCAAATTACTCATCATTaGCTTCCCTTGCAAACTAAC +
Preference number: 4 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGQITHH*LPLQTN
Trigger: GTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGTCAAACTCAGCATCTTaGACCTCTTTGCCATTTCAG +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMSNSAS*TSLPFQ
Trigger: CTGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGA...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTTCTCAATGATGTGGTaGTTCTGGAGACTCAGGATT +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVFSMMW*FWRLRI
Trigger: AATCCTGAGTCTCCAGAACCACCACATCATTGAGAA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCAAAAATTTCCTGTGTaGCAGGAGGAACACAGACAT +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMQKFPV*QEEHRH
Trigger: ATGTCTGTGTTCCTCCTGCCACACAGGAAATTTTTG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGTTCTTTCTTCCAGCTaGTGGGAAAAGAAGTATCAG +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKVLSSS*WEKKYQ
Trigger: CTGATACTTCTTTTCCCACCAGCTGGAAGAAAGAAC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR TCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTCATTGCTCACCAGGTaGATTTCTTTCAAATTACTC +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIISLLTR*ISFKLL
Trigger: GAGTAATTTGAAAGAAATTCACCTGGTGAGCAATGA...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR TCA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTCCAAGGTACAGAATATaGTTATTCTCAATGATGTGG +
Preference number: 4 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIPRYRI*LFSMMW
Trigger: CCACATCATTGAGAATAATCATATTCTGTACCTTGG...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAACTCTGAAAATGACTaGGTTCACCTTGAACTGTCA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKNSEND*VHLELS
Trigger: TGACAGTTCAAGGTGAACTCAGTCATTTTCAGAGTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTAGTTTCCAGATATGGTaGCCCACTTTTTCTTTGCAT +
Preference number: 4 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGSFQIW*PTFSLH
Trigger: ATGCAAAGAAAAAGTGGGCCACCATATCTGGAAACT...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAATGTAGTTTCCAGATATaGTGGCCCACTTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKCSFQI*WPTFSL
Trigger: CAAAGAAAAAGTGGGCCACCATATCTGGAAACTACA...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTGTAGTTTCCAGATATaGTGGCCCACTTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVCSFQI*WPTFSL
Trigger: CAAAGAAAAAGTGGGCCACCATATCTGGAAACTACA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR TCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAATTGCCATTTCAGAACTaGAAGCCTTATATATCTCCA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKLPFQN*KPYISP
Trigger: TGGAGATATATAAGGCTTTCAGTTCTGAAATGGCAA...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCACATAGAACTCCTATaGATGAAGAGGATCTTAAGA +
Preference number: 4 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMHIELL*MKRILR
Trigger: TCTTAAGATCCTCTTCATCCATAGGAGTTCTATGTG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGAGAGTCCTATAATTTaGAATATTGCACGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLESPII*NIARLK
Trigger: TTTCAGCCGTGCAATATTCCAAATTATAGGACTCTC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
3UTR CAA 72 bp TCTGTCACAGGACTGAAAAGAGAATACTCACTAGATTaGGAAAGTAAGAGCACAGCGATGATCTTAATGAAA +
Preference number: 4 (lower is better)
Translates to: SVTGLKREYSLD*ESKSTAMILMK
Trigger: TTTCATTAAGATCATCGCTGTGCTCTTACTTTCCAAATCTAGTGAGTATTCTCTTTTCAGTCCTGTGACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CCA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAACAAATGCTATCAGTaGAAGAATCTACTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKNKCYQ*KNLLMS
Trigger: TGACATCAGTAGATTCTTCCACTGATAGCATTTGTT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CCA 90 bp TCCTCGTGCGGGTGTACAAGTCCGGCCCCCGAGTACGAAGGAAGCTaGAGAGCTACTTCCAGAGCTCTAAGTCCTCGGGCGGCGGGGAGT +
Preference number: 5 (lower is better)
Translates to: SSCGCTSPAPEYEGS*RATSRALSPRAAGS
Trigger: ACTCCCCGCCGCCCGAGGACTTAGAGCTCTGGAAGTAGCTCTCCAGCTTCCTTCGTACTCGGGGGCCGGACTTGTACACCCGCACGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGCATGGATGATCTGTTaGCAGGGAAGCCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: WERAPFTTPTPLRALGVKAWMIC*QGSLPA
Trigger: AGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CCA 90 bp GTACATCCCTGTTTATCCCATTCCATCCACCGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGAAGCCTCCCTGCTCCCGTGACAGCT +
Preference number: 5 (lower is better)
Translates to: VHPCLSHSIHRGPTA*MICLQGSLPAPVTA
Trigger: AGCTGTCACGGGAGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCGGTGGATGGAATGGGATAAACAGGGATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGCTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: WERAPFTTPTPLRALGVKLAPFS*PFPPVL
Trigger: AAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAG...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS GCA 90 bp AATGTGGCCCTGGACAATCTGGAGGGTCAGGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGTTTCTTGTCCCAGCTCACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NVALDNLEGQVVHDH*IERRGGFLSQLTLP
Trigger: GGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGGTGGTTAATGGGAATTaGCCAACTATAGTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: WERAPFTTPTPLRALGVKVVNGN*PTIVFS
Trigger: GGAGAAAACTATAGTTGGCAAATTCCCATTAACCAC...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TGGGAAAGGGCTCCCTTCACTACCCCCACTCCCTTGAGAGCCCTGGGAGTCAAGTTTAAAGGAACTGTATaGCTGAAGAAACCACAAGCC +
Preference number: 5 (lower is better)
Translates to: WERAPFTTPTPLRALGVKFKGTV*LKKPQA
Trigger: GGCTTGTGGTTTCTTCAGCAATACAGTTCCTTTAAA...CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGTGAAGGGAGCCCTTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATACTACCCCCACTCCCTaGAGAGCCCTGGGAGTCAAG +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHTTPTP*RALGVK
Trigger: CTTGACTCCCAGGGCTCTCAAGGGAGTGGGGGTAGT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAAGCTCTTGGGGGAGCTaGGGAAAGGGCTCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQSSWGS*GKGSLH
Trigger: GTGAAGGGAGCCCTTTCCCAAGCTCCCCCAAGAGCT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp TTTGCAGGGAAGCCTCCCTGCTCCCGTGACAGCTATCTCACCAGCTaGCACTTTACCATATCTGGCAACAAACTGTTTGCTCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FAGKPPCSRDSYLTS*HFTISGNKLFALFL
Trigger: CAAGAAGAGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 90 bp ACAATTACATCTGCCGTCTGCCATTCAATGTGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACGACCATTGCATTGAAAGAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: TITSAVCHSMWPWTI*RVRLFTTIALKEGV
Trigger: CACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATTGAATGGCAGACGGCAGATGTAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCCAACAGGGCTGCCACTaGCGAATCCCCTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVQQGCH*RIPSKD
Trigger: ATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTTG...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCAACAGGGCTGCCACTaGCGAATCCCCTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDQQGCH*RIPSKD
Trigger: ATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTTG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACAGGGCTGCCACTaGCGAATCCCCTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPQQGCH*RIPSKD
Trigger: ATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTTG...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACCCAATGATGAGGCATaGACACCTACCGCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRPNDEA*TPTARC
Trigger: ACACCTTGCGGTAGGTGTCAATGCCTCATCATTGGG...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp AAGCCAACTCTGCATACCACATTGCAGAACTGGTATGGGACTTGCTaGAACAGCCTATGGCTCACAGGTTGCCTGTGCAGTTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: KPTLHTTLQNWYGTC*NSLWLTGCLCSFSS
Trigger: GGAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 90 bp CATTCTTTGAAAGCCAACTCTGCATACCACATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCTATGGCTCACAGGTTGCCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: HSLKANSAYHIAELV*DLLKQPMAHRLPVQ
Trigger: CTGCACAGGCAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGCATGGATGATCTGTTaGCAGGGAAGCCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVAWMIC*QGSLPA
Trigger: AGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCAGAAGGGGTGGTTTCTaGTCCCAGCTCACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPRRGGF*SQLTLP
Trigger: GGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCT...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATAAGAAGGGGTGGTTTCTaGTCCCAGCTCACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIRRGGF*SQLTLP
Trigger: GGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCT...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPETQDS*DPCVGL
Trigger: GAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTC...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTGCCAGCTCCGTATTTaGGATCGCAAGGTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPCQLRI*DRKVSS
Trigger: ACTCGACACCTTGCGATCCAAAATACGGAGCTGGCA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCAACAGGGCTGCCACTaGCGAATCCCCTCCAAGGAT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYQQGCH*RIPSKD
Trigger: ATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTTG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGATCTCTGCTAAGGAGTTaGGGCTTTTATCCCGTAGGC +
Preference number: 5 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRSLLRS*GFYPVG
Trigger: GCCTACGGGATAAAAGCCCAAACTCCTTAGCAGAGA...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp GTGGGGGAACAATATTTAACGGATGTCCCTGGCAGAAGAAGCCTGTaGGTACTTCAGCCTCAAACACATAGATCAGCTTATCTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VGEQYLTDVPGRRSL*VLQPQTHRSAYLQQ
Trigger: CTGCTGCAGATAAGCTGATCTATGTGTTTGAGGCTGAAGTACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAATATTGTTCCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 90 bp ATGATGTGGTGGTTCTGGAGACTCAGGATTCTTTGGATCCATGCGTaGGCCTCATACATCTCTTCCACGTTGAATCCCATCAGATTGATG +
Preference number: 5 (lower is better)
Translates to: MMWWFWRLRILWIHA*ASYISSTLNPIRLM
Trigger: CATCAATCTGATGGGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTCCAGAACCACCACATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAAGAAGGGGTGGTTTCTaGTCCCAGCTCACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLRRGGF*SQLTLP
Trigger: GGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCT...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLETQDS*DPCVGL
Trigger: GAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTC...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYETQDS*DPCVGL
Trigger: GAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCCTATGGCTCACAGGTaGCCTGTGCAGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPPMAHR*PVQFFF
Trigger: GAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGG...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAACTCTGCATACCACATaGCAGAACTGGTATGGGACT +
Preference number: 5 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRTLHTT*QNWYGT
Trigger: AGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTGCCAGCTCCGTATTTaGGATCGCAAGGTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRCQLRI*DRKVSS
Trigger: ACTCGACACCTTGCGATCCAAAATACGGAGCTGGCA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCTGCCAGCTCCGTATTTaGGATCGCAAGGTGTCGAGT +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPCQLRI*DRKVSS
Trigger: ACTCGACACCTTGCGATCCAAAATACGGAGCTGGCA...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS TCA 90 bp ATGCCAGCTCCGTATTTTGGATCGCAAGGTGTCGAGTACATTCTTTaGAAGCCAACTCTGCATACCACATTGCAGAACTGGTATGGGACT +
Preference number: 5 (lower is better)
Translates to: MPAPYFGSQGVEYIL*KPTLHTTLQNWYGT
Trigger: AGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGATCCAAAATACGGAGCTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 90 bp GATCCCTTCCCCACAACAACAAATGCTATCAGTGGAAGAATCTACTaGTGTCAGCTCACCAAATTCCACAGAGTAGCCCCAATGATGAGG +
Preference number: 5 (lower is better)
Translates to: DPFPTTTNAISGRIY*CQLTKFHRVAPMMR
Trigger: CCTCATCATTGGGGCTACTCTGTGGAATTTGGTGAGCTGACATCAGTAGATTCTTCCACTGATAGCATTTGTTGTTGTGGGGAAGGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS GCA 90 bp AAGGTGTCGAGTACATTCTTTGAAAGCCAACTCTGCATACCACATTaGAGAACTGGTATGGGACTTGCTGAAACAGCCTATGGCTCACAG +
Preference number: 5 (lower is better)
Translates to: KVSSTFFESQLCIPH*RTGMGLAETAYGSQ
Trigger: CTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCATCATTGGCTTCCCTaGCAAACTAACCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPHHWLP*QTNPDS
Trigger: ACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATG...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTTTCTCCTCTCTGGTaGACTGGGGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPFSPLW*TGGHCN
Trigger: ATTACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIETQDS*DPCVGL
Trigger: GAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTC...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCCTATGGCTCACAGGTaGCCTGTGCAGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPPMAHR*PVQFFF
Trigger: GAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGG...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATACCTATGGCTCACAGGTaGCCTGTGCAGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIPMAHR*PVQFFF
Trigger: GAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGG...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCT +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPELVWD*LKQPMA
Trigger: AGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTC...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGCAGCAGAGATTTTCTaGGCCTTCTCTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRAAEIF*AFSARF
Trigger: AAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAAGTCTGGCTAAGACCTaGGGACCATATTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQSLAKT*GPYSLG
Trigger: TCCCAAGGAATATGGTCCCAAGGTCTTAGCCAGACT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATAAACCACAAGCCTGGTaGCAACAGCCTGAGCACATT +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHKPQAW*QQPEHI
Trigger: AATGTGCTCAGGCTGTTGCAACCAGGCTTGTGGTTT...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp GTCAGCATTTTTCTGAACACTTGCAGAGATTTGCTGTTGCCTTCCTaGACTGGAGAGACCAGGGTAGAGATACAGCCAAACTTATTCTGG +
Preference number: 5 (lower is better)
Translates to: VSIFLNTCRDLLLPS*TGETRVEIQPNLFW
Trigger: CCAGAATAAGTTTGGCTGTATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGTTCAGAAAAATGCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000466126.1
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS GCA 90 bp CACATAGATCAGCTTATCTGCAGCAGAGATTTTCTTGGCCTTCTCTaGCAGGTTTTTGAGGTTCTTGGTGAAGTATATGCCAGCTCCGTA +
Preference number: 5 (lower is better)
Translates to: HIDQLICSRDFLGLL*QVFEVLGEVYASSV
Trigger: TACGGAGCTGGCATATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGCAGATAAGCTGATCTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS GCA 90 bp GAAGCCTGTGAGTACTTCAGCCTCAAACACATAGATCAGCTTATCTaGAGCAGAGATTTTCTTGGCCTTCTCTGCCAGGTTTTTGAGGTT +
Preference number: 5 (lower is better)
Translates to: EACEYFSLKHIDQLI*SRDFLGLLCQVFEV
Trigger: AACCTCAAAAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGCAGATAAGCTGATCTATGTGTTTGAGGCTGAAGTACTCACAGGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 90 bp CATTTTTCTGAACACTTGCAGAGATTTGCTGTTGCCTTCCTGAACTaGAGAGACCAGGGTAGAGATACAGCCAAACTTATTCTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: HFSEHLQRFAVAFLN*RDQGRDTAKLILED
Trigger: GTCCTCCAGAATAAGTTTGGCTGTATCTCTACCCTGGTCTCTCCAGTTCAGGAAGGCAACAGCAAATCTCTGCAAGTGTTCAGAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000466126.1
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 90 bp ACAGAATTAACAATTACATCTGCCGTCTGCCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGGTTGTTCACGACCATTGCATTGAAA +
Preference number: 5 (lower is better)
Translates to: TELTITSAVCHSMWP*TIWRVRLFTTIALK
Trigger: TTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATTGAATGGCAGACGGCAGATGTAATTGTTAATTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCCATCATTGGCTTCCCTaGCAAACTAACCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVHHWLP*QTNPDS
Trigger: ACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATG...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAACATCATTGGCTTCCCTaGCAAACTAACCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQHHWLP*QTNPDS
Trigger: ACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATG...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAAGAAGGGGTGGTTTCTaGTCCCAGCTCACTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKRRGGF*SQLTLP
Trigger: GGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCT...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGATTCAAACTCAGCATCTaGGACCTCTTTGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRFKLSI*DLFAIS
Trigger: TGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGAA...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTTTCTCCTCTCTGGTaGACTGGGGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHFSPLW*TGGHCN
Trigger: ATTACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTGAATCCCATCAGATaGATGGCAGGAGATCTAGCT +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPLNPIR*MAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKETQDS*DPCVGL
Trigger: GAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPLAPFS*PFPPVL
Trigger: AAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAG...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATACTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: EGPESVSFGIYLPQPQDILAPFS*PFPPVL
Trigger: AAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAG...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGCCTATGGCTCACAGGTaGCCTGTGCAGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWPMAHR*PVQFFF
Trigger: GAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGG...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYELVWD*LKQPMA
Trigger: AGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTAGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCT +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLELVWD*LKQPMA
Trigger: AGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTC...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATACTCTGCATACCACATaGCAGAACTGGTATGGGACT +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDTLHTT*QNWYGT
Trigger: AGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGCAGCAGAGATTTTCTaGGCCTTCTCTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYAAEIF*AFSARF
Trigger: AAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGCAGCAGAGATTTTCTaGGCCTTCTCTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLAAEIF*AFSARF
Trigger: AAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGCCCCAAAAGGCTTCTaGGTAGGGATTCATTTCTCT +
Preference number: 5 (lower is better)
Translates to: ANEGTILIITFLIAPKGFAPKGF*VGIHFS
Trigger: AGAGAAATGAATCCCTACCAAGAAGCCTTTTGGGGC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGGTGAGCCAGTGGCTGTaGTGTGTTTTGCTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMVSQWL*CVLLLP
Trigger: GGGGAGAAGCAAAACACACAACAGCCACTGGCTCAC...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS GCA 90 bp CTATCTCACCAGCTGACACTTTACCATATCTGGCAACAAACTGTTTaGTCTCTTCTTGGATTTCAAATCCACCAGCTTTTACCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LSHQLTLYHIWQQTV*SLLGFQIHQLLPGP
Trigger: TGGCCCTGGTAAAAGCTGGTGGATTTGAAATCCAAGAAGAGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGTCAGCTGGTGAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVFTTIA*KEGVVS
Trigger: AGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCCTGCTTGTTGTAGAATaGACTTTGCCACAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: ANEGTILIITFLIAPKGFLLVVE*TLPQVQ
Trigger: TTGGACCTGTGGCAAAGTCAATTCTACAACAAGCAG...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATCTGCTTGTTGTAGAATaGACTTTGCCACAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDLLVVE*TLPQVQ
Trigger: TTGGACCTGTGGCAAAGTCAATTCTACAACAAGCAG...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHYQLGP*KLFSLC
Trigger: ACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDYQLGP*KLFSLC
Trigger: ACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp ACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCTTCAAACTCAGCATCTaGGACCTCTTTGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: TARGRKVLKVFHLVSTYPFKLSI*DLFAIS
Trigger: TGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGAA...GGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTTTCTCCTCTCTGGTaGACTGGGGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGFSPLW*TGGHCN
Trigger: ATTACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTTGAATCCCATCAGATaGATGGCAGGAGATCTAGCT +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHLNPIR*MAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTTGAATCCCATCAGATaGATGGCAGGAGATCTAGCT +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRLNPIR*MAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTCTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGLAPFS*PFPPVL
Trigger: AAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAG...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATGCCATAAGGACCTCATaGTCTATCTTCTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDAIRTS*SIFSTF
Trigger: AAAGGTGGAGAAGATAGACAATGAGGTCCTTATGGC...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGGCCATAAGGACCTCATaGTCTATCTTCTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRAIRTS*SIFSTF
Trigger: AAAGGTGGAGAAGATAGACAATGAGGTCCTTATGGC...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACACTCTGCATACCACATaGCAGAACTGGTATGGGACT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYTLHTT*QNWYGT
Trigger: AGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGT...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGCAGCAGAGATTTTCTaGGCCTTCTCTGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIAAEIF*AFSARF
Trigger: AAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGC...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTGGCCCACTTTTTCTTaGCATAGTCTACTCACAAGG +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDWPTFS*HSLLTR
Trigger: CCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCCA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATTGGCTGTTGTGTGTTTaGCTTCTCCCCTTTCAACAT +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHWLLCV*LLPFQH
Trigger: ATGTTGAAAGGGGAGAAGCAAAACACACAACAGCCA...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAATCAGTGGTAGCAAGATaGGTGTCTCCTGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKSVVAR*VSPGLV
Trigger: GACAAGCCCAGGAGACACCAATCTTGCTACCACTGA...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp GCAGCTTTAAAGGCAGCAACAGTAGGGTCCTCATTGCTCACCAGGTaGATTTCTTTCAAATTACTCATCATTGGCTTCCCTTGCAAACTA +
Preference number: 5 (lower is better)
Translates to: AALKAATVGSSLLTR*ISFKLLIIGFPCKL
Trigger: TAGTTTGCAAGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCACCTGGTGAGCAATGAGGACCCTACTGTTGCTGCCTTTAAAGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYFTTIA*KEGVVS
Trigger: AGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAA...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACTGCTTGTTGTAGAATaGACTTTGCCACAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLLLVVE*TLPQVQ
Trigger: TTGGACCTGTGGCAAAGTCAATTCTACAACAAGCAG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGAATCCCATCAGATaGATGGCAGGAGATCTAGCT +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLLNPIR*MAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATATTGAATCCCATCAGATaGATGGCAGGAGATCTAGCT +
Preference number: 5 (lower is better)
Translates to: WLVLSITQSVHTDNPWDILNPIR*MAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAA...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCTACATCTCTTCCACGTaGAATCCCATCAGATTGATG +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVYISST*NPIRLM
Trigger: CATCAATCTGATGGGATTCAACGTGGAAGAGATGTA...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTCTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIILAPFS*PFPPVL
Trigger: AAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAG...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAATTCGTCTTGGGTTTTTaGTTGCTGAATAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQFVLGF*LLNSPL
Trigger: CAGTGGACTATTCAGCAACAAAAAACCCAAGACGAA...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTTCGTCTTGGGTTTTTaGTTGCTGAATAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSFVLGF*LLNSPL
Trigger: CAGTGGACTATTCAGCAACAAAAAACCCAAGACGAA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCTTCGTCTTGGGTTTTTaGTTGCTGAATAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: NCKRKEGPESVSFGIYLPFVLGF*LLNSPL
Trigger: CAGTGGACTATTCAGCAACAAAAAACCCAAGACGAA...GGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGCCATAAGGACCTCATaGTCTATCTTCTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLAIRTS*SIFSTF
Trigger: AAAGGTGGAGAAGATAGACAATGAGGTCCTTATGGC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGCCTATGGCTCACAGGTaGCCTGTGCAGTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLPMAHR*PVQFFF
Trigger: GAAGAAAAACTGCACAGGCAACCTGTGAGCCATAGG...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCT +
Preference number: 5 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLELVWD*LKQPMA
Trigger: AGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTC...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDCRVHS*KANSAY
Trigger: GTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACA...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATGTGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATAGGTTTTTGAGGTTCTaGGTGAAGTATATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: MWLVLSITQSVHTDNPWDRFLRF*VKYMPA
Trigger: AGCTGGCATATACTTCACCAAGAACCTCAAAAACCT...ATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCAGGTTTTTGAGGTTCTaGGTGAAGTATATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVRFLRF*VKYMPA
Trigger: AGCTGGCATATACTTCACCAAGAACCTCAAAAACCT...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTTCTCTGCCAGGTTTTaGAGGTTCTTGGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRFSARF*RFLVKY
Trigger: ATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCCCAACCCCAAGACATATTCTCTGCCAGGTTTTaGAGGTTCTTGGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: EGPESVSFGIYLPQPQDIFSARF*RFLVKY
Trigger: ATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAA...TATGTCTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTTCTCTGCCAGGTTTTaGAGGTTCTTGGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSFSARF*RFLVKY
Trigger: ATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAGTGCAAAGGGTCTCATaGGTCCTGATGAGTAATCTT +
Preference number: 5 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLVQRVS*VLMSNL
Trigger: AAGATTACTCATCAGGACCAATGAGACCCTTTGCAC...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACGTGCAAAGGGTCTCATaGGTCCTGATGAGTAATCTT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYVQRVS*VLMSNL
Trigger: AAGATTACTCATCAGGACCAATGAGACCCTTTGCAC...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: FKPLFEPSMVIIWLVHPRYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...CCTTGGGTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGTATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATATGGCCCACTTTTTCTTaGCATAGTCTACTCACAAGG +
Preference number: 5 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIWPTFS*HSLLTR
Trigger: CCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCCA...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000471785.5
ENST00000492382.5
CDS-3UTR CAA 90 bp GGCAGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGAATTTCTTTTCCTCTTTaGGAGAGAACTAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GRRNTDMAWKGISSAWKRISFPL*ERTKAR
Trigger: TCTGGCTTTAGTTCTCTCCAAAAGAGGAAAAGAAAT...TCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGGAGGAACACAGACATGGCCTGGAAAGGAATTTCTTCAGCATGGAAAAGACATGAATACTCACTAGATTaGGAAAGTAAGAGCACAGCG +
Preference number: 5 (lower is better)
Translates to: RRNTDMAWKGISSAWKRHEYSLD*ESKSTA
Trigger: CGCTGTGCTCTTACTTTCCAAATCTAGTGAGTATTC...ATGTCTTTTCCATGCTGAAGAAATTCCTTTCCAGGCCATGTCTGTGTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGTGTGTAGATGCCTTCTaGCTGCACTCAACCAAGTCC +
Preference number: 5 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLCVDAF*LHSTKS
Trigger: GGACTTGGTTGAGTGCAGCAAGAAGGCATCTACACA...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GCTAATGAAGGGACTATACTGATCATCACTTTCCTGATTGCCCCAAAAGGCTTCGAAAAGGGGCAAACATaGCAGGAACTGAGTTTCAAT +
Preference number: 5 (lower is better)
Translates to: ANEGTILIITFLIAPKGFEKGQT*QELSFN
Trigger: ATTGAAACTCAGTTCCTGCAATGTTTGCCCCTTTTC...GAAGCCTTTTGGGGCAATCAGGAAAGTGATGATCAGTATAGTCCCTTCATTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGACCCTGCATTCAGCTaGGAGGATGAACATGCTCAA +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKDPAFS*EDEHAQ
Trigger: TTGAGCATGTTCATCCTCCAAGCTGAATGCAGGGTC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp CATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCGTGGTTAATGGGAATTaGCCAACTATAGTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: HTDNPWDIFKPLFEPSMVVVNGN*PTIVFS
Trigger: GGAGAAAACTATAGTTGGCAAATTCCCATTAACCAC...GACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTCATCATTGGCTTCCCTaGCAAACTAACCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGHHWLP*QTNPDS
Trigger: ACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATG...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIFTTIA*KEGVVS
Trigger: AGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAA...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIYQLGP*KLFSLC
Trigger: ACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTA...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTCAAACTCAGCATCTaGGACCTCTTTGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLFKLSI*DLFAIS
Trigger: TGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGAA...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTATTCAAACTCAGCATCTaGGACCTCTTTGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLFKLSI*DLFAIS
Trigger: TGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGAA...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTTTTTCTCCTCTCTGGTaGACTGGGGGACACTGTAAT +
Preference number: 5 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGFSPLW*TGGHCN
Trigger: ATTACAGTGTCCCCCAGTCAACCAGAGAGGAGAAAA...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TGGCTAGTCCTTTCAATAACCCAGTCAGTCCATACAGATAACCCATGGGATATATACATCTCTTCCACGTaGAATCCCATCAGATTGATG +
Preference number: 5 (lower is better)
Translates to: WLVLSITQSVHTDNPWDIYISST*NPIRLM
Trigger: CATCAATCTGATGGGATTCAACGTGGAAGAGATGTA...TATATCCCATGGGTTATCTGTATGGACTGACTGGGTTATTGAAAGGACTAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGCCATAAGGACCTCATaGTCTATCTTCTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIAIRTS*SIFSTF
Trigger: AAAGGTGGAGAAGATAGACAATGAGGTCCTTATGGC...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACACTCTGCATACCACATaGCAGAACTGGTATGGGACT +
Preference number: 5 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHTLHTT*QNWYGT
Trigger: AGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGT...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGCRVHS*KANSAY
Trigger: GTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGAGGTTTTTGAGGTTCTaGGTGAAGTATATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWRFLRF*VKYMPA
Trigger: AGCTGGCATATACTTCACCAAGAACCTCAAAAACCT...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACAGGTTTTTGAGGTTCTaGGTGAAGTATATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYRFLRF*VKYMPA
Trigger: AGCTGGCATATACTTCACCAAGAACCTCAAAAACCT...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTTCTCTGCCAGGTTTTaGAGGTTCTTGGTGAAGTAT +
Preference number: 5 (lower is better)
Translates to: THGIYSSHSLSHRWSLFGFSARF*RFLVKY
Trigger: ATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAA...ACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTGTGCAAAGGGTCTCATaGGTCCTGATGAGTAATCTT +
Preference number: 5 (lower is better)
Translates to: DNPWDIFKPLFEPSMVIIVQRVS*VLMSNL
Trigger: AAGATTACTCATCAGGACCAATGAGACCCTTTGCAC...AATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TCAGTCCATACAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATCGATGGTCATTATTaGGTTAGTTCACCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: SVHTDNPWDIFKPLFEPSIDGHY*VSSPKV
Trigger: TACCTTGGGTGAACTAACCAAATAATGACCATCGAT...CGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTGTATGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACTATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTATTCAAGCCACTCTTaGAGCCATCGATGGTCATTA +
Preference number: 5 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWYSSHS*SHRWSL
Trigger: TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATA...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp CAGATAACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTACTGAAAGTGTTTCATTaGGTATCTACCTACCCCAAC +
Preference number: 5 (lower is better)
Translates to: QITHGIYSSHSLSHRWSLLKVFH*VSTYPN
Trigger: GTTGGGGTAGGTAGATACCAAATGAAACACTTTCAG...TAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTTATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTATCTACCTACCTGAAAGTGTTTCATTaGGTATCTACCTACCCCAAC +
Preference number: 5 (lower is better)
Translates to: TTARGRKVLKVFHLVSTYLKVFH*VSTYPN
Trigger: GTTGGGGTAGGTAGATACCAAATGAAACACTTTCAG...GTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS CCA 90 bp GTCCTCATTGCTCACCAGGTGAATTTCTTTCAAATTACTCATCATTaGCTTCCCTTGCAAACTAACCCGGATAGTCTCTACAATAGTCTT +
Preference number: 5 (lower is better)
Translates to: VLIAHQVNFFQITHH*LPLQTNPDSLYNSL
Trigger: AAGACTATTGTAGAGACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCACCTGGTGAGCAATGAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLFTTIA*KEGVVS
Trigger: AGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAA...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTCTGCTTGTTGTAGAATaGACTTTGCCACAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGLLVVE*TLPQVQ
Trigger: TTGGACCTGTGGCAAAGTCAATTCTACAACAAGCAG...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHYQLGP*KLFSLC
Trigger: ACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTA...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAAGCCATAAGGACCTCATaGTCTATCTTCTCCACCTTT +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKAIRTS*SIFSTF
Trigger: AAAGGTGGAGAAGATAGACAATGAGGTCCTTATGGC...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp AACCCATGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGATCGATGGTCATTATTaGGTTAGTTCACCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: NPWDIFKPLFEPSMVIIWIDGHY*VSSPKV
Trigger: TACCTTGGGTGAACTAACCAAATAATGACCATCGAT...CCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCATGGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp ATCGATGGTCATTATTTGGTTAGTTCACCCAAGGTAAGGCCATACCAGCTGTTAATCGATGGTCATTATTaGGTTAGTTCACCCAAGGTA +
Preference number: 5 (lower is better)
Translates to: IDGHYLVSSPKVRPYQLLIDGHY*VSSPKV
Trigger: TACCTTGGGTGAACTAACCAAATAATGACCATCGAT...TAACAGCTGGTATGGCCTTACCTTGGGTGAACTAACCAAATAATGACCATCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp GGGAGAATCAGCAAACAAAGGGCATATTTCTTAGGGAAAATCATGACCAAGAAATGGCCCACTTTTTCTTaGCATAGTCTACTCACAAGG +
Preference number: 5 (lower is better)
Translates to: GRISKQRAYFLGKIMTKKWPTFS*HSLLTR
Trigger: CCTTGTGAGTAGACTATGCAAAGAAAAAGTGGGCCA...TTTCTTGGTCATGATTTTCCCTAAGAAATATGCCCTTTGTTTGCTGATTCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGCCAAGTCTATTGGAATaGACTCCTCAGCAAGGATCA +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMPSLLE*TPQQGS
Trigger: TGATCCTTGCTGAGGAGTCAATTCCAATAGACTTGG...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGTTAATGGCTGCAGTCTaGAGGAACATAGTGGGTGAT +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMLMAAV*RNIVGD
Trigger: ATCACCCACTATGTTCCTCAAGACTGCAGCCATTAA...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GGGTCATCATTTGTGACCTCTAAATCACAGTCACAAATGATCCCTTCCCCACAAATGACTGAGTTCACCTaGAACTGTCAAGATTCAAAT +
Preference number: 5 (lower is better)
Translates to: GSSFVTSKSQSQMIPSPQMTEFT*NCQDSN
Trigger: ATTTGAATCTTGACAGTTCAAGGTGAACTCAGTCAT...TTGTGGGGAAGGGATCATTTGTGACTGTGATTTAGAGGTCACAAATGATGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS TCA 90 bp CAGAACAAGTTAAATCCTTTTGTGACCAGTACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTGGCAAGAAATTCCGATTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: QNKLNPFVTSTNWDR*NCLAFVARNSDFIS
Trigger: TGAAATGAAATCGGAATTTCTTGCCACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTACTGGTCACAAAAGGATTTAACTTGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS-3UTR CAA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTTTCAAACTCAGCATCTaGGACCTCTTTGCCATTTCA +
Preference number: 5 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGFKLSI*DLFAIS
Trigger: TGAAATGGCAAAGAGGTCCAAGATGCTGAGTTTGAA...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AGATTAAAGAACAACTGCAAGAGGAAGGAAGGTCCTGAAAGTGTTTCATTTGGTTACATCTCTTCCACGTaGAATCCCATCAGATTGATG +
Preference number: 5 (lower is better)
Translates to: RLKNNCKRKEGPESVSFGYISST*NPIRLM
Trigger: CATCAATCTGATGGGATTCAACGTGGAAGAGATGTA...ACCAAATGAAACACTTTCAGGACCTTCCTTCCTCTTGCAGTTGTTCTTTAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGTACATCTCTTCCACGTaGAATCCCATCAGATTGATG +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMYISST*NPIRLM
Trigger: CATCAATCTGATGGGATTCAACGTGGAAGAGATGTA...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTTCGTCTTGGGTTTTTaGTTGCTGAATAGTCCACTG +
Preference number: 5 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVFVLGF*LLNSPL
Trigger: CAGTGGACTATTCAGCAACAAAAAACCCAAGACGAA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVCRVHS*KANSAY
Trigger: GTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACA...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMCRVHS*KANSAY
Trigger: GTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACA...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATAC +
Preference number: 5 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHCRVHS*KANSAY
Trigger: GTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACA...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp TGGGATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCTGAAAGTGTTTCATTaGGTATCTACCTACCCCAAC +
Preference number: 5 (lower is better)
Translates to: WDIFKPLFEPSMVIIWLVLKVFH*VSTYPN
Trigger: GTTGGGGTAGGTAGATACCAAATGAAACACTTTCAG...AACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000492382.5
CDS-3UTR CAA 90 bp AGAGTGCAAAATAAAGGTTTTACAACATGGAATAGGGAGTCCTCTCTATACCTGCATTTACCCCAAGTTTaGCCTATGTTCTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RVQNKGFTTWNRESSLYLHLPQV*PMFSPE
Trigger: TTCTGGAGAGAACATAGGCAAAACTTGGGGTAAATG...CAGGTATAGAGAGGACTCCCTATTCCATGTTGTAAAACCTTTATTTTGCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS-3UTR CAA 90 bp GATATATTCAAGCCACTCTTTGAGCCATCGATGGTCATTATTTGGTTAGTTCACGTGGTTAATGGGAATTaGCCAACTATAGTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DIFKPLFEPSMVIIWLVHVVNGN*PTIVFS
Trigger: GGAGAAAACTATAGTTGGCAAATTCCCATTAACCAC...GTGAACTAACCAAATAATGACCATCGATGGCTCAAAGAGTGGCTTGAATATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
CDS-3UTR CAA 90 bp TTTATTTACACTCTATTTCTAGTACCCCTAGCACAGGGCCTGATTCATAGAATGGACGGTTCAGTGCTGTaGGTAATAATTTTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: FIYTLFLVPLAQGLIHRMDGSVL*VIILLR
Trigger: TCTCAACAAAATTATTACCAACAGCACTGAACCGTC...CATTCTATGAATCAGGCCCTGTGCTAGGGGTACTAGAAATAGAGTGTAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS GCA 90 bp CTGAAAAAGAGGCTAGAGAACCGCTCTTTAAATTGCCTGCTATACTaGTTCAAAAATAAAGGAGCTTATGTGCATAATACTACTTTGCAT +
Preference number: 5 (lower is better)
Translates to: LKKRLENRSLNCLLY*FKNKGAYVHNTTLH
Trigger: ATGCAAAGTAGTATTATGCACATAAGCTCCTTTATTTTTGAAGCAGTATAGCAGGCAATTTAAAGAGCGGTTCTCTAGCCTCTTTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS CCA 72 bp GGGTGTACAAGTCCGGCCCCCGAGTACGAAGGAAGCTaGAGAGCTACTTCCAGAGCTCTAAGTCCTCGGGCG +
Preference number: 6 (lower is better)
Translates to: GCTSPAPEYEGS*RATSRALSPRA
Trigger: CGCCCGAGGACTTAGAGCTCTGGAAGTAGCTCTCCAGCTTCCTTCGTACTCGGGGGCCGGACTTGTACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360356.6
ENST00000477522.6
CDS CAA 72 bp TCCATCCACCGAGGCCCAACAGCATGGATGATCTGTTaGCAGGGAAGCCTCCCTGCTCCCGTGACAGCTATC +
Preference number: 6 (lower is better)
Translates to: SIHRGPTAWMIC*QGSLPAPVTAI
Trigger: GATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCGGTGGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 90 bp TTATCCCATTCCATCCACCGAGGCCCAACAGCATGGATGATCTGTTaGCAGGGAAGCCTCCCTGCTCCCGTGACAGCTATCTCACCAGCT +
Preference number: 6 (lower is better)
Translates to: LSHSIHRGPTAWMIC*QGSLPAPVTAISPA
Trigger: AGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCGGTGGATGGAATGGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp TGTTTATCCCATTCCATCCACCGAGGCCCAACAGCATaGATGATCTGTTTGCAGGGAAGCCTCCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: CLSHSIHRGPTA*MICLQGSLPAP
Trigger: GGGAGCAGGGAGGCTTCCCTGCAAACAGATCATCCATGCTGTTGGGCCTCGGTGGATGGAATGGGATAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp TTTGCGCTTCAAAGCATAGACTGTAGTTTCCAGATATaGTGGCCCACTTCCGGCAGGCCGCTCTCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: FALQSIDCSFQI*WPTSGRPLSSV
Trigger: CACCGAGGAGAGCGGCCTGCCGGAAGTGGGCCACCATATCTGGAAACTACAGTCTATGCTTTGAAGCGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682323.1
CDS CAA 90 bp TGGCCCTGGACAATCTGGAGGGTCAGGTTGTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCTTGTCCCAGCTCACTCTTCCCTAGG +
Preference number: 6 (lower is better)
Translates to: WPWTIWRVRLFTTIA*KEGVVSCPSSLFPR
Trigger: CCTAGGGAAGAGTGAGCTGGGACAAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS TCA 72 bp CTGCATACCACATTGCAGAACTGGTATGGGACTTGCTaGAACAGCCTATGGCTCACAGGTTGCCTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: LHTTLQNWYGTC*NSLWLTGCLCS
Trigger: ACTGCACAGGCAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS GCA 72 bp CTGGACAATCTGGAGGGTCAGGTTGTTCACGACCATTaGATTGAAAGAAGGGGTGGTTTCTTGTCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LDNLEGQVVHDH*IERRGGFLSQL
Trigger: GAGCTGGGACAAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp TCTGCCGTCTGCCATTCAATGTGGCCCTGGACAATCTaGAGGGTCAGGTTGTTCACGACCATTGCATTGAAA +
Preference number: 6 (lower is better)
Translates to: SAVCHSMWPWTI*RVRLFTTIALK
Trigger: TTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATTGAATGGCAGACGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 90 bp TGCCACTTGCGAATCCCCTCCAAGGATGCTGTGCAAAGGGTCTCATaGGTCCTGATGAGTAATCTTGTGACTGTACATATTCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: CHLRIPSKDAVQRVS*VLMSNLVTVHIPGC
Trigger: GCACCCAGGAATATGTACAGTCACAAGATTACTCATCAGGACCAATGAGACCCTTTGCACAGCATCCTTGGAGGGGATTCGCAAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 72 bp AAGCCTCCCTGCTCCCGTGACAGCTATCTCACCAGCTaGCACTTTACCATATCTGGCAACAAACTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: KPPCSRDSYLTS*HFTISGNKLFA
Trigger: AGCAAACAGTTTGTTGCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGCTGTCACGGGAGCAGGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS TCA 72 bp CAATCTGGAGGGTCAGGTTGTTCACGACCATTGCATTaGAAGAAGGGGTGGTTTCTTGTCCCAGCTCACTCT +
Preference number: 6 (lower is better)
Translates to: QSGGSGCSRPLH*KKGWFLVPAHS
Trigger: AGAGTGAGCTGGGACAAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp ACAATTACATCTGCCGTCTGCCATTCAATGTGGCCCTaGACAATCTGGAGGGTCAGGTTGTTCACGACCATT +
Preference number: 6 (lower is better)
Translates to: TITSAVCHSMWP*TIWRVRLFTTI
Trigger: AATGGTCGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATTGAATGGCAGACGGCAGATGTAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp TGGTTCTGGAGACTCAGGATTCTTTGGATCCATGCGTaGGCCTCATACATCTCTTCCACGTTGAATCCCATC +
Preference number: 6 (lower is better)
Translates to: WFWRLRILWIHA*ASYISSTLNPI
Trigger: GATGGGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTCCAGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 72 bp TCAATGATGTGGTGGTTCTGGAGACTCAGGATTCTTTaGATCCATGCGTGGGCCTCATACATCTCTTCCACG +
Preference number: 6 (lower is better)
Translates to: SMMWWFWRLRIL*IHAWASYISST
Trigger: CGTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTCCAGAACCACCACATCATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 72 bp CTCAGTGGTGGGGGAACAATATTTAACGGATGTCCCTaGCAGAAGAAGCCTGTGAGTACTTCAGCCTCAAAC +
Preference number: 6 (lower is better)
Translates to: LSGGGTIFNGCP*QKKPVSTSASN
Trigger: GTTTGAGGCTGAAGTACTCACAGGCTTCTTCTGCCAGGGACATCCGTTAAATATTGTTCCCCCACCACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp ACAATCTGGAGGGTCAGGTTGTTCACGACCATTGCATaGAAAGAAGGGGTGGTTTCTTGTCCCAGCTCACTC +
Preference number: 6 (lower is better)
Translates to: TIWRVRLFTTIA*KEGVVSCPSSL
Trigger: GAGTGAGCTGGGACAAGAAACCACCCCTTCTTTCAATGCAATGGTCGTGAACAACCTGACCCTCCAGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 72 bp TGGATCCATGCGTGGGCCTCATACATCTCTTCCACGTaGAATCCCATCAGATTGATGGCAGGAGATCTAGCT +
Preference number: 6 (lower is better)
Translates to: WIHAWASYISST*NPIRLMAGDLA
Trigger: AGCTAGATCTCCTGCCATCAATCTGATGGGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATGGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp CTCAATGATGTGGTGGTTCTGGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTCATACATCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: LNDVVVLETQDS*DPCVGLIHLFH
Trigger: GTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTCCAGAACCACCACATCATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp AACTCTGCATACCACATTGCAGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCTCACAGGTTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: NSAYHIAELVWD*LKQPMAHRLPV
Trigger: CACAGGCAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp TTTTGCTCAAAGACGGGCTTCCTGGATCTGGAATCCTaGCTTCTGTGTGTCCTGATGTCATTCCTACCTCCC +
Preference number: 6 (lower is better)
Translates to: FCSKTGFLDLES*LLCVLMSFLPP
Trigger: GGGAGGTAGGAATGACATCAGGACACACAGAAGCAAGGATTCCAGATCCAGGAAGCCCGTCTTTGAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS CAA 90 bp AGGATTCTTTGGATCCATGCGTGGGCCTCATACATCTCTTCCACGTaGAATCCCATCAGATTGATGGCAGGAGATCTAGCTTCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RILWIHAWASYISST*NPIRLMAGDLASSP
Trigger: TGGGCTTGAAGCTAGATCTCCTGCCATCAATCTGATGGGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 72 bp GAATTAACAATTACATCTGCCGTCTGCCATTCAATGTaGCCCTGGACAATCTGGAGGGTCAGGTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: ELTITSAVCHSM*PWTIWRVRLFT
Trigger: CGTGAACAACCTGACCCTCCAGATTGTCCAGGGCCACATTGAATGGCAGACGGCAGATGTAATTGTTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CCA 72 bp AAAGCCAACTCTGCATACCACATTGCAGAACTGGTATaGGACTTGCTGAAACAGCCTATGGCTCACAGGTTG +
Preference number: 6 (lower is better)
Translates to: KANSAYHIAELV*DLLKQPMAHRL
Trigger: CAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp CACCAAATTCCACAGAGTAGCCCCAATGATGAGGCATaGACACCTACCGCAAGGTGTCGAGTACATTCTTTG +
Preference number: 6 (lower is better)
Translates to: HQIPQSSPNDEA*TPTARCRVHSL
Trigger: CAAAGAATGTACTCGACACCTTGCGGTAGGTGTCAATGCCTCATCATTGGGGCTACTCTGTGGAATTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CAA 90 bp CATGCGTGGGCCTCATACATCTCTTCCACGTTGAATCCCATCAGATaGATGGCAGGAGATCTAGCTTCAAGCCCATTTTCTCTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: HAWASYISSTLNPIR*MAGDLASSPFSLFS
Trigger: GGAGAAAAGAGAAAATGGGCTTGAAGCTAGATCTCCTGCCATCAATCTGATGGGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 90 bp TTGAAAGCCAACTCTGCATACCACATTGCAGAACTGGTATGGGACTaGCTGAAACAGCCTATGGCTCACAGGTTGCCTGTGCAGTTTTTC +
Preference number: 6 (lower is better)
Translates to: LKANSAYHIAELVWD*LKQPMAHRLPVQFF
Trigger: GAAAAACTGCACAGGCAACCTGTGAGCCATAGGCTGTTTCAGCAAGTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 90 bp ATGTCAGCTCACCAAATTCCACAGAGTAGCCCCAATGATGAGGCATaGACACCTACCGCAAGGTGTCGAGTACATTCTTTGAAAGCCAAC +
Preference number: 6 (lower is better)
Translates to: MSAHQIPQSSPNDEA*TPTARCRVHSLKAN
Trigger: GTTGGCTTTCAAAGAATGTACTCGACACCTTGCGGTAGGTGTCAATGCCTCATCATTGGGGCTACTCTGTGGAATTTGGTGAGCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CAA 90 bp TATGCCAGCTCCGTATTTTGGATCGCAAGGTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATACCACATTGCAGAACTGGTATGGGAC +
Preference number: 6 (lower is better)
Translates to: YASSVFWIARCRVHS*KANSAYHIAELVWD
Trigger: GTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGATCCAAAATACGGAGCTGGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 90 bp AATGATGAGGCATTGACACCTACCGCAAGGTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATACCACATTGCAGAACTGGTATGGGAC +
Preference number: 6 (lower is better)
Translates to: NDEALTPTARCRVHS*KANSAYHIAELVWD
Trigger: GTCCCATACCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGGTAGGTGTCAATGCCTCATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CAA 90 bp CTTCTTTTATTTTGCTCAAAGACGGGCTTCCTGGATCTGGAATCCTaGCTTCTGTGTGTCCTGATGTCATTCCTACCTCCCGATTCCAAC +
Preference number: 6 (lower is better)
Translates to: LLLFCSKTGFLDLES*LLCVLMSFLPPDSN
Trigger: GTTGGAATCGGGAGGTAGGAATGACATCAGGACACACAGAAGCAAGGATTCCAGATCCAGGAAGCCCGTCTTTGAGCAAAATAAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS CAA 72 bp GTCCTAACGAGCGCCAAAGGCCTCGCTCCTTTTTCCTaGCCATTTCCTCCTGTACTTTACAAAGCATATCTT +
Preference number: 6 (lower is better)
Translates to: VLTSAKGLAPFS*PFPPVLYKAYL
Trigger: AAGATATGCTTTGTAAAGTACAGGAGGAAATGGCAAGGAAAAAGGAGCGAGGCCTTTGGCGCTCGTTAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp GCAGCAGAGATTTTCTTGGCCTTCTCTGCCAGGTTTTaGAGGTTCTTGGTGAAGTATATGCCAGCTCCGTAT +
Preference number: 6 (lower is better)
Translates to: AAEIFLAFSARF*RFLVKYMPAPY
Trigger: ATACGGAGCTGGCATATACTTCACCAAGAACCTCAAAAACCTGGCAGAGAAGGCCAAGAAAATCTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CAA 72 bp GCATTGACACCTACCGCAAGGTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATACCACATTGCAGAACTG +
Preference number: 6 (lower is better)
Translates to: ALTPTARCRVHS*KANSAYHIAEL
Trigger: CAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGGTAGGTGTCAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CAA 72 bp TTGTCATCAAAGTCTCCCTCTCTGCACACACAGCACTaGACTTCATCCACTCTGTCAGTCCCATTCCTACTA +
Preference number: 6 (lower is better)
Translates to: LSSKSPSLHTQH*TSSTLSVPFLL
Trigger: TAGTAGGAATGGGACTGACAGAGTGGATGAAGTCAAGTGCTGTGTGTGCAGAGAGGGAGACTTTGATGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS CAA 90 bp GCTATCTCACCAGCTGACACTTTACCATATCTGGCAACAAACTGTTaGCTCTCTTCTTGGATTTCAAATCCACCAGCTTTTACCAGGGCC +
Preference number: 6 (lower is better)
Translates to: AISPADTLPYLATNC*LSSWISNPPAFTRA
Trigger: GGCCCTGGTAAAAGCTGGTGGATTTGAAATCCAAGAAGAGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGTCAGCTGGTGAGATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 90 bp ATGATTATTCTCAATGATGTGGTGGTTCTGGAGACTCAGGATTCTTaGGATCCATGCGTGGGCCTCATACATCTCTTCCACGTTGAATCC +
Preference number: 6 (lower is better)
Translates to: MIILNDVVVLETQDS*DPCVGLIHLFHVES
Trigger: GGATTCAACGTGGAAGAGATGTATGAGGCCCACGCATGGATCCAAAGAATCCTGAGTCTCCAGAACCACCACATCATTGAGAATAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 72 bp CCGTATTTTGGATCGCAAGGTGTCGAGTACATTCTTTaGAAGCCAACTCTGCATACCACATTGCAGAACTGG +
Preference number: 6 (lower is better)
Translates to: PYFGSQGVEYIL*KPTLHTTLQNW
Trigger: CCAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGATCCAAAATACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 72 bp CCCACAACAACAAATGCTATCAGTGGAAGAATCTACTaGTGTCAGCTCACCAAATTCCACAGAGTAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PTTTNAISGRIY*CQLTKFHRVAP
Trigger: TGGGGCTACTCTGTGGAATTTGGTGAGCTGACATCAGTAGATTCTTCCACTGATAGCATTTGTTGTTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462315.5
CDS CAA 72 bp GCCTCATACATCTCTTCCACGTTGAATCCCATCAGATaGATGGCAGGAGATCTAGCTTCAAGCCCATTTTCT +
Preference number: 6 (lower is better)
Translates to: ASYISSTLNPIR*MAGDLASSPFS
Trigger: AGAAAATGGGCTTGAAGCTAGATCTCCTGCCATCAATCTGATGGGATTCAACGTGGAAGAGATGTATGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 72 bp AAGGCAGCAACAGTAGGGTCCTCATTGCTCACCAGGTaGATTTCTTTCAAATTACTCATCATTGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: KAATVGSSLLTR*ISFKLLIIGFP
Trigger: AGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCACCTGGTGAGCAATGAGGACCCTACTGTTGCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 72 bp TCCGTATTTTGGATCGCAAGGTGTCGAGTACATTCTTaGAAAGCCAACTCTGCATACCACATTGCAGAACTG +
Preference number: 6 (lower is better)
Translates to: SVFWIARCRVHS*KANSAYHIAEL
Trigger: CAGTTCTGCAATGTGGTATGCAGAGTTGGCTTTCAAAGAATGTACTCGACACCTTGCGATCCAAAATACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 72 bp GCTCACCAGGTGAATTTCTTTCAAATTACTCATCATTaGCTTCCCTTGCAAACTAACCCGGATAGTCTCTAC +
Preference number: 6 (lower is better)
Translates to: AHQVNFFQITHH*LPLQTNPDSLY
Trigger: GTAGAGACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCACCTGGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 72 bp GTTAAATCCTTTTGTGACCAGTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGTGGCAAGAAATTCCGA +
Preference number: 6 (lower is better)
Translates to: VKSFCDQYQLGP*KLFSLCGKKFR
Trigger: TCGGAATTTCTTGCCACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTACTGGTCACAAAAGGATTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS TCA 72 bp TTAAATCCTTTTGTGACCAGTACCAACTGGGACCGTTaGAACTGTTTAGCCTTTGTGGCAAGAAATTCCGAT +
Preference number: 6 (lower is better)
Translates to: LNPFVTSTNWDR*NCLAFVARNSD
Trigger: ATCGGAATTTCTTGCCACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTACTGGTCACAAAAGGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS TCA 72 bp CCTTTCTCCCAAGGTACAGAATATGATTATTCTCAATaGTGTGGTGGTTCTGGAGACTCAGGATTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: PFSQGTEYDYSQ*CGGSGDSGFFG
Trigger: TCCAAAGAATCCTGAGTCTCCAGAACCACCACATCATTGAGAATAATCATATTCTGTACCTTGGGAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS TCA 72 bp GACTGTACATATTCCTGGGTGCATGTCCACAAATACTaGGGTATAGCCTGCATGCCACTAAAAATAACAAAG +
Preference number: 6 (lower is better)
Translates to: DCTYSWVHVHKY*GIACMPLKITK
Trigger: CTTTGTTATTTTTAGTGGCATGCAGGCTATACCTCAGTATTTGTGGACATGCACCCAGGAATATGTACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360356.6
ENST00000471785.5
ENST00000477522.6
ENST00000489652.1
ENST00000492382.5
ENST00000682323.1
CDS CCA 72 bp TTTGCGCTTCAAAGCATAGACTGTAGTTTCCAGATATaGTGGCCCACTTTTTCTTTGCATAGTCTACTCACA +
Preference number: 6 (lower is better)
Translates to: FALQSIDCSFQI*WPTFSLHSLLT
Trigger: TGTGAGTAGACTATGCAAAGAAAAAGTGGGCCACCATATCTGGAAACTACAGTCTATGCTTTGAAGCGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000462315.5
ENST00000466126.1
ENST00000471785.5
ENST00000492382.5
CDS CAA 72 bp CCAGCTGACACTTTACCATATCTGGCAACAAACTGTTaGCTCTCTTCTTGGATTTCAAATCCACCAGCTTTT +
Preference number: 6 (lower is better)
Translates to: PADTLPYLATNC*LSSWISNPPAF
Trigger: AAAAGCTGGTGGATTTGAAATCCAAGAAGAGAGCAAACAGTTTGTTGCCAGATATGGTAAAGTGTCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 90 bp GCTCACCAGGTGAATTTCTTTCAAATTACTCATCATTGGCTTCCCTaGCAAACTAACCCGGATAGTCTCTACAATAGTCTTTGTACACAA +
Preference number: 6 (lower is better)
Translates to: AHQVNFFQITHHWLP*QTNPDSLYNSLCTQ
Trigger: TTGTGTACAAAGACTATTGTAGAGACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCACCTGGTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 90 bp ACAGAACAAGTTAAATCCTTTTGTGACCAGTACCAACTGGGACCGTaGAAACTGTTTAGCCTTTGTGGCAAGAAATTCCGATTTCATTTC +
Preference number: 6 (lower is better)
Translates to: TEQVKSFCDQYQLGP*KLFSLCGKKFRFHF
Trigger: GAAATGAAATCGGAATTTCTTGCCACAAAGGCTAAACAGTTTCAACGGTCCCAGTTGGTACTGGTCACAAAAGGATTTAACTTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS GCA 72 bp TACTACTTTGCATGCAATTCGCTTTTCATAGAAAGTTaGAAAAGAGTCTCTCCTCCCTCTAATCCTCTCCTA +
Preference number: 6 (lower is better)
Translates to: YYFACNSLFIES*KRVSPPSNPLL
Trigger: TAGGAGAGGATTAGAGGGAGGAGAGACTCTTTTGCAACTTTCTATGAAAAGCGAATTGCATGCAAAGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS GCA 72 bp AGGCTAGAGAACCGCTCTTTAAATTGCCTGCTATACTaGTTCAAAAATAAAGGAGCTTATGTGCATAATACT +
Preference number: 6 (lower is better)
Translates to: RLENRSLNCLLY*FKNKGAYVHNT
Trigger: AGTATTATGCACATAAGCTCCTTTATTTTTGAAGCAGTATAGCAGGCAATTTAAAGAGCGGTTCTCTAGCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS GCA 72 bp AGACTGAAAAAGAGGCTAGAGAACCGCTCTTTAAATTaGCTGCTATACTGCTTCAAAAATAAAGGAGCTTAT +
Preference number: 6 (lower is better)
Translates to: RLKKRLENRSLN*LLYCFKNKGAY
Trigger: ATAAGCTCCTTTATTTTTGAAGCAGTATAGCAGGCAATTTAAAGAGCGGTTCTCTAGCCTCTTTTTCAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489652.1
CDS CCA 72 bp ATTCAGAGGGAACTGAAAAATCCCAGAGCTCAAGGCTaGAATTGCTACTGTCTTAATGTGAGTATTTTTATA +
Preference number: 6 (lower is better)
Translates to: IQRELKNPRAQG*NCYCLNVSIFI
Trigger: TATAAAAATACTCACATTAAGACAGTAGCAATTCCAGCCTTGAGCTCTGGGATTTTTCAGTTCCCTCTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS CAA 72 bp GTGAATTTCTTTCAAATTACTCATCATTGGCTTCCCTaGCAAACTAACCCGGATAGTCTCTACAATAGTCTT +
Preference number: 6 (lower is better)
Translates to: VNFFQITHHWLP*QTNPDSLYNSL
Trigger: AAGACTATTGTAGAGACTATCCGGGTTAGTTTGCAAGGGAAGCCAATGATGAGTAATTTGAAAGAAATTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360356.6
ENST00000462315.5
ENST00000471785.5
ENST00000477522.6
ENST00000682323.1
CDS GCA 72 bp GCCTGCTATACTGCTTCAAAAATAAAGGAGCTTATGTaGATAATACTACTTTGCATGCAATTCGCTTTTCAT +
Preference number: 6 (lower is better)
Translates to: ACYTASKIKELM*IILLCMQFAFH
Trigger: ATGAAAAGCGAATTGCATGCAAAGTAGTATTATGCACATAAGCTCCTTTATTTTTGAAGCAGTATAGCAGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489652.1