RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP8 (Homo sapiens)

Ensembl gene IDs: ENSG00000151883

Ensembl transcript IDs: ENST00000281631.10, ENST00000503193.5, ENST00000503561.7, ENST00000503707.6, ENST00000503790.6, ENST00000503888.5, ENST00000505554.5, ENST00000505697.6, ENST00000507812.5, ENST00000510303.6, ENST00000511363.6, ENST00000513738.5, ENST00000514067.6, ENST00000514342.6, ENST00000515166.5

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGGACGGTTCAAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTGGACAAGGAGCGGCCAAAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: QGRFKSLCDLIAVIA*SALGSLDKERPKVL
Trigger: CAGGACCTTTGGCCGCTCCTTGTCCAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 90 bp AACAGCTGCAGGGCAAGGACGGTTCAAAAGTTTGTGCGATTTAATTaGTGTCATAGCCTGCTCCGCCCTGGGATCGCTGGACAAGGAGCG +
Preference number: 1 (lower is better)
Translates to: NSCRARTVQKFVRFN*CHSLLRPGIAGQGA
Trigger: CGCTCCTTGTCCAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 90 bp TCCTCTGACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTTGTaGGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCGCTG +
Preference number: 1 (lower is better)
Translates to: SSDLTAAGQGRFKSL*DLIAVIACSALGSL
Trigger: CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR TCA 90 bp TTACCTGAGAGAAACTGCATGTGGCCCATATATCTCTCTAACTGCTaGCAAATCAGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATC +
Preference number: 1 (lower is better)
Translates to: LPERNCMWPIYLSNC*QISFQLWVLVQFPI
Trigger: GATGGGGAACTGCACAAGCACCCACAACTGGAAGCTGATTTGTCAGCAGTTAGAGAGATATATGGGCCACATGCAGTTTCTCTCAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503193.5
3UTR GCA 90 bp TCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCAGCTTATaGGTTTTGGAGATTCCGTCCTGCTCAGATTTCAGTTTGGATTTG +
Preference number: 1 (lower is better)
Translates to: SSVLTVLEQVLRSSL*VLEIPSCSDFSLDL
Trigger: CAAATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 90 bp TGCTCACATCGTGGATCTCCAGAACAAGATCGAGTCAATAGTCTATaGGACTTTAGAGTTAGGCATTCCTCTGACTTAACAGCTGCAGGG +
Preference number: 1 (lower is better)
Translates to: CSHRGSPEQDRVNSL*DFRVRHSSDLTAAG
Trigger: CCCTGCAGCTGTTAAGTCAGAGGAATGCCTAACTCTAAAGTCGCATAGACTATTGACTCGATCTTGTTCTGGAGATCCACGATGTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 90 bp CAGACATGGTCAGTATTGGGGACAACCCATATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATTTT +
Preference number: 1 (lower is better)
Translates to: QTWSVLGTTHISPCL*RSDEVITSHKAMHF
Trigger: AAAATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGACCATGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CCA 90 bp GAAGGCCAACATCTGAGGATCATTAGGATCTACCACAGAAGGATATaGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCT +
Preference number: 1 (lower is better)
Translates to: EGQHLRIIRIYHRRI*LENHNFSRRFQRRP
Trigger: AGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGTAGATCCTAATGATCCTCAGATGTTGGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 90 bp CTTCAAATAAGTGGTCACAAAACACTGGATAGGATATTATATCTTTaGCCTACTCCACTACTATTATCCCTCAGCCTAGCCCAGGGTTCA +
Preference number: 1 (lower is better)
Translates to: LQISGHKTLDRILYL*PTPLLLSLSLAQGS
Trigger: TGAACCCTGGGCTAGGCTGAGGGATAATAGTAGTGGAGTAGGGCAAAGATATAATATCCTATCCAGTGTTTTGTGACCACTTATTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR TCA 90 bp CAGGAACAGTTTGTATTATGCCAATTTTCCTTAAACGGTCTTTCTTaGGTCTTACGAGTTACCGTTCCAGTTCAGACTCCAATACTATAT +
Preference number: 1 (lower is better)
Translates to: QEQFVLCQFSLNGLS*VLRVTVPVQTPILY
Trigger: ATATAGTATTGGAGTCTGAACTGGAACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAAGGAAAATTGGCATAATACAAACTGTTCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp TTGTGTTGTGCTCACATCGTGGATCTCCAGAACAAGATCGAGTCAATAGTCTATCCGCCCTGGGATCGCTaGACAAGGAGCGGCCAAAGG +
Preference number: 2 (lower is better)
Translates to: LCCAHIVDLQNKIESIVYPPWDR*TRSGQR
Trigger: CCTTTGGCCGCTCCTTGTCCAGCGATCCCAGGGCGG...ATAGACTATTGACTCGATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp CGGCCAAAGGTCCTGTGTGACTTTGTGACACACACATCATCAGTCTaGACTGTGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTG +
Preference number: 2 (lower is better)
Translates to: RPKVLCDFVTHTSSV*TVLEQVLRSSLCVL
Trigger: CAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAAGTCACACAGGACCTTTGGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp CATTCCTCTGACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCG +
Preference number: 2 (lower is better)
Translates to: HSSDLTAAGQGRFKS*CDLIAVIACSALGS
Trigger: CGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTCAGAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp AAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCGCTGGCCAAAGGTCCTGTGTaGCTTTGTGACACACACATC +
Preference number: 2 (lower is better)
Translates to: KSLCDLIAVIACSALGSLAKGPV*LCDTHI
Trigger: GATGTGTGTGTCACAAAGTCACACAGGACCTTTGGC...CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp AAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCGCTGTTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 2 (lower is better)
Translates to: KSLCDLIAVIACSALGSLFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCTGGCTGGTGGACTGCTaGGAAGAAGGAACTGATGTG +
Preference number: 2 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLWLVDC*EEGTDV
Trigger: CACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCA...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp GTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCAGATTTCAGTTTGGATTTGCTTTTG +
Preference number: 2 (lower is better)
Translates to: VLTVLEQVLRSSLCV*EIPSCSDFSLDLLL
Trigger: CAAAAGCAAATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCACAGTCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATCTCCGCAGCAGCTTATaGGTTTTGGAGATTCCGTCC +
Preference number: 2 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHLRSSL*VLEIPS
Trigger: GGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAG...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTAGGGGGAGGATAACTTaGCGACCTGCGCAAAGTAGA +
Preference number: 2 (lower is better)
Translates to: LEATTRPFLRMECQFSMCRGRIT*RPAQSR
Trigger: TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCT...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp TCCAGTTGCTATTTCATCAGCAGCTTCATTCATTACTCCCAGGGTTaGAAAAGCAAACACACACAGCTCCCGTTCACATACGGTAGGCCT +
Preference number: 2 (lower is better)
Translates to: SSCYFISSFIHYSQG*KSKHTQLPFTYGRP
Trigger: AGGCCTACCGTATGTGAACGGGAGCTGTGTGTGTTTGCTTTTCAAACCCTGGGAGTAATGAATGAAGCTGCTGATGAAATAGCAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp GTGCAGACATGGTCAGTATTGGGGACAACCCATATCTCTCCATGTTaGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCAT +
Preference number: 2 (lower is better)
Translates to: VQTWSVLGTTHISPC*CRSDEVITSHKAMH
Trigger: ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGACCATGTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTG +
Preference number: 2 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGIAVIA*SALGSL
Trigger: CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAAT...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATGCAAACTCAATTGTCTaGACCAGGAAGCCACGGTCT +
Preference number: 2 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHANSIV*TRKPRS
Trigger: AGACCGTGGCTTCCTGGTGCAGACAATTGAGTTTGC...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSAAYAF*RFRPAQ
Trigger: CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGC...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp ATTTACCTGAGAGAAACTGCATGTGGCCCATATATCTCTCTAACTGCTGACAAAGCTTCCAGTTGTGGGTaGTTGTGCAGTTCCCCATCA +
Preference number: 2 (lower is better)
Translates to: IYLRETACGPYISLTADKASSCG*LCSSPS
Trigger: TGATGGGGAACTGCACAAGCACCCACAACTGGAAGC...TTTGTCAGCAGTTAGAGAGATATATGGGCCACATGCAGTTTCTCTCAGGTAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503193.5
3UTR-3UTR GCA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTGTTTGGATTTGCTTTTaGCACAACCAGGGGGAGGAT +
Preference number: 2 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSVWICF*HNQGED
Trigger: ATCCTCCCCCTGGTTGTGGCAAAAGCAAATCCAAAC...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATGCCACGGTCTCGTACTaGAATGCATTTTGCACCATT +
Preference number: 2 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHATVSY*NAFCTI
Trigger: AATGGTGCAAAATGCATTCCAGTACGAGACCGTGGC...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATGGTCTCGTACTGGAATaGATTTTGCACCATTTGGAG +
Preference number: 2 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHGLVLE*ILHHLE
Trigger: CTCCAAATGGTGCAAAATGCATTCCAGTACGAGACC...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp TACATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTGAGAAGAAGGAACTaGTGTGGAGTATGCATAAAC +
Preference number: 2 (lower is better)
Translates to: YIAPWSCNRVLEATTRPFLRRRN*CGVCIN
Trigger: GTTTATGCATACTCCACATCAGTTCCTTCTTCTCAG...GAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp TTTGGCTGGTGGACTGCTGAGAAGAAGGAACTGATGTGGAGTATGCATAAACTTATTTCAGTTTGGATTTaGTTTTGCCACAACCAGGGG +
Preference number: 2 (lower is better)
Translates to: FGWWTAEKKELMWSMHKLISVWI*FCHNQG
Trigger: CCCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAAT...AAGTTTATGCATACTCCACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNKLARP*LTPSVS
Trigger: AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTT...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp CACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTTTTCAGCAATCCTTTTaGGATCCACAGGAAACGGAA +
Preference number: 2 (lower is better)
Translates to: HLQNLPPLYYSVLIPPHFFQQSF*DPQETE
Trigger: TTCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAA...AAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000503888.5
3UTR-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAGAGCTTATTGGAGGTaGCTCAGTGGTCCTAGTGGT +
Preference number: 2 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLRAYWR*LSGPSG
Trigger: ACCACTAGGACCACTGAGGCACCTCCAATAAGCTCT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR GCA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCATTGGAGATTCCGTCCTaGTCAGATTTCAGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: TTEGYGSKITTFLGDSNALEIPS*SDFSLD
Trigger: ATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAA...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAACTCTACAGAGCTTATTaGAGGTGCCTCAGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKLYRAY*RCLSGP
Trigger: AGGACCACTGAGGCACCTCCAATAAGCTCTGTAGAG...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTGTTGTGCTCACATCGTaGATCTCCAGAACAAGATCG +
Preference number: 2 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGVVLTS*ISRTRS
Trigger: CGATCTTGTTCTGGAGATCCACGATGTGAGCACAAC...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp TTGATTACCAATTACTCGGAGGATCTCTTTGTGAATGCCTCCTTCTaGTGTATTAATATTTGCATCTCCCACTTGGCCGTCTTCATAGAC +
Preference number: 2 (lower is better)
Translates to: LITNYSEDLFVNASF*CINICISHLAVFID
Trigger: GTCTATGAAGACGGCCAAGTGGGAGATGCAAATATTAATACACAAGAAGGAGGCATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 2 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAAAAACACAGTTGAAGTaGTTTGGGAGACTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLKTQLK*FGRLAA
Trigger: TGCTGCAAGTCTCCCAAATCACTTCAACTGTGTTTT...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR GCA 90 bp TACATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCGATTTCCAGATATGGTaGTTGTGTCATTTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: YIAPWSCNRVLEATTRPFDFQIW*LCHFSD
Trigger: ATCAGAGAAATGACACAAGCACCATATCTGGAAATC...GAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAATGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTTTCAAGTTTGTGTTGTaGTCACATCGTGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFFKFVL*SHRGSP
Trigger: TGGAGATCCACGATGTGAGCACAACACAAACTTGAA...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR GCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTTACTGGAATGCATTTTaGACCATTTGGAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFYWNAF*TIWSKL
Trigger: CAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTA...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTACGCAGACCTACACATaGATACTAGTAGATCTACCA +
Preference number: 2 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFTQTYT*ILVDLP
Trigger: TGGTAGATCTACTAGTATCCATGTGTAGGTCTGCGT...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR TCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATTGAAAAGGAAATGCTaGGAGCTGGTGTTACTGTTC +
Preference number: 2 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKLKRKC*ELVLLF
Trigger: GAACAGTAACACCAGCTCTCAGCATTTCCTTTTCAA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR GCA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATACTGTGATGTATTGCTaGTTTTACTGCTTGAAGCTG +
Preference number: 2 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNTVMYC*FYCLKL
Trigger: CAGCTTCAAGCAGTAAAAGCAGCAATACATCACAGT...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAACAGTTGAAGTGATTTaGGAGACTTGCAGCATCTTG +
Preference number: 2 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLTVEVI*ETCSIL
Trigger: CAAGATGCTGCAAGTCTCCCAAATCACTTCAACTGT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTCTGCTTAACAGTTTATaGGGCTTCAAGTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFLLNSL*GFKFVL
Trigger: CAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp ACAGGAACAGTTTGTATTATGCCAATTTTCCTTAAACGGTCTTTCTaGAGTCTTACGAGTTACCGTTCCAGTTCAGACTCCAATACTATA +
Preference number: 2 (lower is better)
Translates to: TGTVCIMPIFLKRSF*SLTSYRSSSDSNTI
Trigger: TATAGTATTGGAGTCTGAACTGGAACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAAGGAAAATTGGCATAATACAAACTGTTCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGATTTTGAATTATGCTaGAGGCACTCTACAGAGCTT +
Preference number: 2 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKDFELC*RHSTEL
Trigger: AAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTCTTGATTTCCAGATATaGTGCTTGTGTCATTTCTCT +
Preference number: 2 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFLDFQI*CLCHFS
Trigger: AGAGAAATGACACAAGCACCATATCTGGAAATCAAG...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 90 bp CAACCCAAATTGTTTCAAATAATTCATTGGGTGTTAACCCTGACATaGTTACCAGTGACTGAAATATCCATGTTACCACATTGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: QPKLFQIIHWVLTLT*LPVTEISMLPHCPE
Trigger: TTCTGGACAATGTGGTAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAATTATTTGAAACAATTTGGGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAAACTGCTTTCATGAATaGCCTTATTCCAAAGACAAC +
Preference number: 2 (lower is better)
Translates to: DNSVQISKLYGPAWILEANCFHE*PYSKDN
Trigger: GTTGTCTTTGGAATAAGGCCATTCATGAAAGCAGTT...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAAAATGTGCTTCAAATaGCACCATGAAATCCGTATT +
Preference number: 2 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLKMCFK*HHEIRI
Trigger: AATACGGATTTCATGGTGGCATTTGAAGCACATTTT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR GCA 72 bp TTCAAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTGGACAAGGAGCGGCCA +
Preference number: 3 (lower is better)
Translates to: FKSLCDLIAVIA*SALGSLDKERP
Trigger: TGGCCGCTCCTTGTCCAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp AGGGCAAGGACGGTTCAAAAGTTTGTGCGATTTAATTaGTGTCATAGCCTGCTCCGCCCTGGGATCGCTGGA +
Preference number: 3 (lower is better)
Translates to: RARTVQKFVRFN*CHSLLRPGIAG
Trigger: TCCAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTGTTCAGCAAACTCAATaGTCTGCACCAGGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSVQQTQ*SAPGSH
Trigger: GTGGCTTCCTGGTGCAGACAATTGAGTTTGCTGAAC...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp ATTATGCTGGAGGCACTCTACAGAGCTTATTGGAGGTaGCTCAGTGGTCCTAGTGGTCAAACAGGTGGAGTT +
Preference number: 3 (lower is better)
Translates to: IMLEALYRAYWR*LSGPSGQTGGV
Trigger: AACTCCACCTGTTTGACCACTAGGACCACTGAGGCACCTCCAATAAGCTCTGTAGAGTGCCTCCAGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR GCA 72 bp TTGACTGTGCTGGAACAAGTCCTCCGCAGCAGCTTATaGGTTTTGGAGATTCCGTCCTGCTCAGATTTCAGT +
Preference number: 3 (lower is better)
Translates to: LTVLEQVLRSSL*VLEIPSCSDFS
Trigger: ACTGAAATCTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCACAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp TTGTCTGCACCAGGAAGCCACGGTCTCGTACTGGAATaGATTTTGCACCATTTGGAGCAAGCTGAGAAGATG +
Preference number: 3 (lower is better)
Translates to: LSAPGSHGLVLE*ILHHLEQAEKM
Trigger: CATCTTCTCAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTACGAGACCGTGGCTTCCTGGTGCAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CCA 72 bp TGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAGATTTCAGTTTGGATT +
Preference number: 3 (lower is better)
Translates to: CWNKSSAAAYAF*RFRPAQISVWI
Trigger: AATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCGGCTTCAAGTTTGTGTaGTGCTCACATCGTGGATCT +
Preference number: 3 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLGFKFV*CSHRGS
Trigger: AGATCCACGATGTGAGCACAACACAAACTTGAAGCC...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp CCACTTGGCCGTCTTCATAGACGAAAAAGAATCGTGTaGAGACATGGTCAGTATTGGGGACAACCCATATCT +
Preference number: 3 (lower is better)
Translates to: PLGRLHRRKRIV*RHGQYWGQPIS
Trigger: AGATATGGGTTGTCCCCAATACTGACCATGTCTGCACACGATTCTTTTTCGTCTATGAAGACGGCCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CCA 72 bp TATTGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCTTGTTCATCCCTGAGT +
Preference number: 3 (lower is better)
Translates to: YCCFYCLKLARP*LTPSVSCSSLS
Trigger: ACTCAGGGATGAACAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATAACGGAACCAGGATCTaGAAGCAATATCTCCACCAC +
Preference number: 3 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHNGTRI*KQYLHH
Trigger: GTGGTGGAGATATTGCTTCAAGATCCTGGTTCCGTT...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503888.5
3UTR-3UTR CAA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCA +
Preference number: 3 (lower is better)
Translates to: TTEGYGSKITTFLGDSNASSLCV*EIPSCS
Trigger: TGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCT...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCAAGCATAGGGCCATTTaGAAACACATGTGGCTCATC +
Preference number: 3 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLKHRAI*KHMWLI
Trigger: GATGAGCCACATGTGTTTCAAAATGGCCCTATGCTT...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp TCAGTATTGGGGACAACCCATATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATCACTTCACATAAGGCT +
Preference number: 3 (lower is better)
Translates to: SVLGTTHISPCL*RSDEVITSHKA
Trigger: AGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp ATAGTTCACCTGCCCTCCGTAATAAAATTCTTCGGAATCATTGTCACCTTCAGACAAATCAGCTTCCAGTaGTGGGTGCTTGTGCAGTTC +
Preference number: 3 (lower is better)
Translates to: IVHLPSVIKFFGIIVTFRQISFQ*WVLVQF
Trigger: GAACTGCACAAGCACCCACAACTGGAAGCTGATTTG...TCTGAAGGTGACAATGATTCCGAAGAATTTTATTACGGAGGGCAGGTGAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503193.5
ENST00000503707.6
3UTR-3UTR CAA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCATATGGGGCTTCAAGTTaGTGTTGTGCTCACATCGTG +
Preference number: 3 (lower is better)
Translates to: TTEGYGSKITTFLGDSNAYGASS*CCAHIV
Trigger: CACGATGTGAGCACAACACAAACTTGAAGCCCCATA...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATGTACTGGAATGCATTTaGCACCATTTGGAGCAAGCT +
Preference number: 3 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHVLECI*HHLEQA
Trigger: AGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTAC...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp TTTGGCTGGTGGACTGCTGAGAAGAAGGAACTGATGTGGAGTATGCATAAACTTCATTACTCCCAGGGTTaGAAAAGCAAACACACACAG +
Preference number: 3 (lower is better)
Translates to: FGWWTAEKKELMWSMHKLHYSQG*KSKHTQ
Trigger: CTGTGTGTGTTTGCTTTTCAAACCCTGGGAGTAATG...AAGTTTATGCATACTCCACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR TCA 72 bp CGTTCACATACGGTAGGCCTAAGCATAGGGCCATTTTaGAACACATGTGGCTCATCACAAACCACACAATAT +
Preference number: 3 (lower is better)
Translates to: RSHTVGLSIGPF*NTCGSSQTTQY
Trigger: ATATTGTGTGGTTTGTGATGAGCCACATGTGTTTCAAAATGGCCCTATGCTTAGGCCTACCGTATGTGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR GCA 72 bp AGTGGTCACAAAACACTGGATAGGATATTATATCTTTaGCCTACTCCACTACTATTATCCCTCAGCCTAGCC +
Preference number: 3 (lower is better)
Translates to: SGHKTLDRILYL*PTPLLLSLSLA
Trigger: GGCTAGGCTGAGGGATAATAGTAGTGGAGTAGGGCAAAGATATAATATCCTATCCAGTGTTTTGTGACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CAA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTGTTCAAAATCCAGCTTaGAACCCGAGGAAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGVQNPA*NPRKAF
Trigger: GAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAAC...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp TCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTATTTCAGCAATCCTTTaGAGATCCACAGGAAACGGA +
Preference number: 3 (lower is better)
Translates to: SPSESSSTVLFCLDSSPFISAIL*RSTGNG
Trigger: TCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAAT...AAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503888.5
3UTR-3UTR CAA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATCACACATCATCAGTCTaGACTGTGCTGGAACAAGTC +
Preference number: 3 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNHTSSV*TVLEQV
Trigger: GACTTGTTCCAGCACAGTCAAGACTGATGATGTGTG...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCATCTGCGTTAGGTTCCTaGAAAAGCTCAGTTTTGGAT +
Preference number: 3 (lower is better)
Translates to: TTEGYGSKITTFLGDSNASALGS*KSSVLD
Trigger: ATCCAAAACTGAGCTTTTCAAGGAACCTAACGCAGA...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR TCA 72 bp GATCTATTACTTGATATAACCCATTGCAGTAAGGGATaGGCAAGGGGGTCCTGTTTATCCATTTGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: DLLLDITHCSKG*ARGSCLSICFL
Trigger: CAAGAAGCAAATGGATAAACAGGACCCCCTTGCTCATCCCTTACTGCAATGGGTTATATCAAGTAATAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAGTAGATGACCCAATGTaGAGTGTCCCCTTCATGACA +
Preference number: 3 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLVDDPM*SVPFMT
Trigger: TGTCATGAAGGGGACACTCAACATTGGGTCATCTAC...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CAA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTGATTTCAGTTTGGATTaGCTTTTGCCACAACCAGGG +
Preference number: 3 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGDFSLD*LLPQPG
Trigger: CCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAATC...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR-3UTR CAA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAGCTAAGCCATCTTTCTaGTCAAAACATACGTGTGAA +
Preference number: 3 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLAKPSF*SKHTCE
Trigger: TTCACACGTATGTTTTGACAAGAAAGATGGCTTAGC...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR TCA 72 bp TGCCACCATGAAATCCGTATTTATTTAGACGGTAGATaGCCCAATGTTGAGTGTCCCCTTCATGACATATTA +
Preference number: 3 (lower is better)
Translates to: CHHEIRIYLDGR*PNVECPLHDIL
Trigger: TAATATGTCATGAAGGGGACACTCAACATTGGGTCATCTACCGTCTAAATAAATACGGATTTCATGGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAACTTAAACGGTCTTTCTaGAGTCTTACGAGTTACCGT +
Preference number: 3 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKLKRSF*SLTSYR
Trigger: ACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAAG...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR TCA 72 bp TTTGTATTATGCCAATTTTCCTTAAACGGTCTTTCTTaGGTCTTACGAGTTACCGTTCCAGTTCAGACTCCA +
Preference number: 3 (lower is better)
Translates to: FVLCQFSLNGLS*VLRVTVPVQTP
Trigger: TGGAGTCTGAACTGGAACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAAGGAAAATTGGCATAATACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAATTGTATGGACCTGCTaGGATTTTGGAAGCACATTT +
Preference number: 3 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLIVWTC*DFGSTF
Trigger: AAATGTGCTTCCAAAATCCAAGCAGGTCCATACAAT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR TCA 72 bp AATAGAGTGGCAGACTCACTAATTAAACTGCTTTCATaGATGGCCTTATTCCAAAGACAACATGTGGGAAAA +
Preference number: 3 (lower is better)
Translates to: NRVADSLIKLLS*MALFQRQHVGK
Trigger: TTTTCCCACATGTTGTCTTTGGAATAAGGCCATTCATGAAAGCAGTTTAATTAGTGAGTCTGCCACTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
3UTR-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAAAATCAGATAGAGCCTaGATTCAGGGTTTGAATAGA +
Preference number: 3 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKKSDRA*IQGLNR
Trigger: TCTATTCAAACCCTGAATCAAGGCTCTATCTGATTT...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAAAGGTTCTGACGCAATaGTTTGAAACAAAATCTGTC +
Preference number: 3 (lower is better)
Translates to: DNSVQISKLYGPAWILEAKVLTQ*FETKSV
Trigger: GACAGATTTTGTTTCAAACAATTGCGTCAGAACCTT...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAAGAGCAATCACCGGCTaGGCGGCGGGCGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLRAITG*AAGAGE
Trigger: CTCGCCGGCGCCCGCCGCCCAGCCGGTGATTGCTCT...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTCCGTGGGGGCCGAGGTaGCGGGGACAGCCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIPWGPR*RGQPES
Trigger: GCTCTCTGGCTGTCCCCGGCACCTCGGCCCCCACGG...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AATCAGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCCGCTTCCAGTTGTGGGTaGTTGTGCAGTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: NQLPVVGACAVPHHSSPAASSCG*LCSSPS
Trigger: TGATGGGGAACTGCACAAGCACCCACAACTGGAAGC...GGCAGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503193.5
ENST00000503707.6
CDS-3UTR GCA 90 bp GTGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCTTTGTGCGATTTAATTaGTGTCATAGCCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: VLEQVLRSSLCVLEIPSCFVRFN*CHSLLR
Trigger: GCGGAGCAGGCTATGACAGCAATTAAATCGCACAAA...GCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTGAGCCTCCTGCCCTCTaGGTTAGGTTCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSEPPAL*VRFLEK
Trigger: CTTTTCAAGGAACCTAACGCAGAGGGCAGGAGGCTC...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TTTGCTTTTGCCACAACCAGGGGGAGGATAACTTGGCGACCTGCGCAAAGTAGAGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FAFATTRGRITWRPAQSRAAYAF*RFRPAQ
Trigger: CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGC...TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCTGGTTGTGGCAAAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCCGCCCTGGGATCGCTaGACAAGGAGCGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWPPWDR*TRSGQR
Trigger: CCTTTGGCCGCTCCTTGTCCAGCGATCCCAGGGCGG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp CTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCCCTCCGTTTCAGATACATGTACTaGGTAGGATACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LPVVGACAVPHHSSPALRFRYMY*VGYTSG
Trigger: CCCAGAAGTGTATCCTACTCAGTACATGTATCTGAA...ACGGAGGGCAGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503707.6
CDS-3UTR TCA 90 bp GTGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCCCAGTTTTCAATGTGTaGGCCATGAAATGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VLEQVLRSSLCVLEIPSCPVFNV*AMKCKG
Trigger: ACCTTTGCATTTCATGGCTCACACATTGAAAACTGG...GCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp ACAAATCAGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCTTCCAGTTGTGGGTaGTTGTGCAGTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: TNQLPVVGACAVPHHSSPASSCG*LCSSPS
Trigger: TGATGGGGAACTGCACAAGCACCCACAACTGGAAGC...AGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAGCTGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503193.5
ENST00000503707.6
CDS-3UTR GCA 90 bp AAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCGCTGGCAAACTCAATTGTCTaGACCAGGAAGCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: KSLCDLIAVIACSALGSLANSIV*TRKPRS
Trigger: AGACCGTGGCTTCCTGGTGCAGACAATTGAGTTTGC...CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCTCAGTTCCTCAGGATGGAGTaGCAGTTTTCAATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: WNKSSAAAYAFWRFRPAQFLRME*QFSMCE
Trigger: CTCACACATTGAAAACTGGCACTCCATCCTGAGGAA...CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSKLARP*LTPSVS
Trigger: AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTT...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp GTGCTGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCAGATTTCAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: VLEQVLRSSLCV*EIPSCSDFSLD
Trigger: ATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp GACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: DLTAAGQGRFKS*CDLIAVIACSA
Trigger: GGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp GCACCAGGAAGCCACGGTCTCGTACTGGAATGCATTTaGCACCATTTGGAGCAAGCTGAGAAGATGAAGATG +
Preference number: 4 (lower is better)
Translates to: APGSHGLVLECI*HHLEQAEKMKM
Trigger: CATCTTCATCTTCTCAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTACGAGACCGTGGCTTCCTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TTTGCTTTTGCCACAACCAGGGGGAGGATAACTTGGCGACCTGCGCAAAGTAGAAGTAGATCTACCACCTaGGCTCCAGTTGCTATTTCA +
Preference number: 4 (lower is better)
Translates to: FAFATTRGRITWRPAQSRSRSTT*APVAIS
Trigger: TGAAATAGCAACTGGAGCTCAGGTGGTAGATCTACT...TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCTGGTTGTGGCAAAAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCTCTGACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTTGTGCGATTTATGGCTGGTGGACTGCTaGGAAGAAGGAACTGATGTG +
Preference number: 4 (lower is better)
Translates to: SSDLTAAGQGRFKSLCDLWLVDC*EEGTDV
Trigger: CACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCA...TAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCTGCTTTTACTGCTTaGAGCTGGCTCGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSAAFTA*SWLVLG
Trigger: GCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp CTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTGCGGAGGATCTCTTTGTaGATGCCTCCTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLLLLEAGSSLADTFCFLRRISL*MPPSCV
Trigger: TACACAAGAAGGAGGCATTCACAAAGAGATCCTCCG...CAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAAAGTTTGTGCGATTTAATTGCTGTCATAGCCTGCTCCGCCCTGGGATCGCTGTCCACTTCCATACATTaGACCATGGAGCTGCAATCG +
Preference number: 4 (lower is better)
Translates to: KSLCDLIAVIACSALGSLSTSIH*TMELQS
Trigger: CGATTGCAGCTCCATGGTGCAATGTATGGAAGTGGA...CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAATTAAATCGCACAAACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCTCAGCGAAAAAGAATCGTGTaGAGACATGGTCAGTATTGG +
Preference number: 4 (lower is better)
Translates to: WNKSSAAAYAFWRFRPAQRKRIV*RHGQYW
Trigger: CCAATACTGACCATGTCTGCACACGATTCTTTTTCG...CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCACCGCCCTGGGATCGCTaGACAAGGAGCGGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: DNSVQISKLYGPAWILEAPPWDR*TRSGQR
Trigger: CCTTTGGCCGCTCCTTGTCCAGCGATCCCAGGGCGG...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp CTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTGGCCACGGTCTCGTACTaGAATGCATTTTGCACCATT +
Preference number: 4 (lower is better)
Translates to: LLLLLEAGSSLADTFCFLATVSY*NAFCTI
Trigger: AATGGTGCAAAATGCATTCCAGTACGAGACCGTGGC...CAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp GTATTGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTaGGCTGACACCTTCTGTTTCTTGTTCATCCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLLLLLLEAGSS*ADTFCFLFIPE
Trigger: CTCAGGGATGAACAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGCTCCATATTCCCTaGGAGAAACTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWLHIP*EKLHVA
Trigger: GGCCACATGCAGTTTCTCTCAGGGAATATGGAGCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGCTGGTGGACTGCTaGGAAGAAGGAACTGATGTG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWLVDC*EEGTDV
Trigger: CACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGCTGCTTTTACTGCTTaGAGCTGGCTCGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TTEGYGSKITTFLGDSNAAAFTA*SWLVLG
Trigger: GCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGC...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGAGTCAGAGTATCTaGAATAAGCGCAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWSQSI*NKRSAA
Trigger: CGCTGCGCTGCGCTTATTTCAGATACTCTGACTCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505554.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCTTCCAGTTGTGGGTaGTTGTGCAGTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSASSCG*LCSSPS
Trigger: TGATGGGGAACTGCACAAGCACCCACAACTGGAAGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TTTGTGACACACACATCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCTTCCCTGAGAGAAACTaGATGTGGCCCATATATCTC +
Preference number: 4 (lower is better)
Translates to: FVTHTSSVLTVLEQVLRSFPERN*MWPIYL
Trigger: GAGATATATGGGCCACATGCAGTTTCTCTCAGGGAA...GCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCTCCGCAGCAGCTTATaGGTTTTGGAGATTCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLRSSL*VLEIPS
Trigger: GGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWIAVIA*SALGSL
Trigger: CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAAT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGAGCCTCCTGCCCTCTaGGTTAGGTTCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSEPPAL*VRFLEK
Trigger: CTTTTCAAGGAACCTAACGCAGAGGGCAGGAGGCTC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTATTGCTGCTTTTACTaGTTGAAGCTGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSYCCFY*LKLARP
Trigger: AGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATA...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCTCAGACTGTGATGTATTGCTaGTTTTACTGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: WNKSSAAAYAFWRFRPAQTVMYC*FYCLKL
Trigger: CAGCTTCAAGCAGTAAAAGCAGCAATACATCACAGT...CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAGGGGGAGGATAACTTaGCGACCTGCGCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSRGRIT*RPAQSR
Trigger: TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TTGTCTGCACCAGGAAGCCACGGTCTCGTACTGGAATGCATTTTGCACCATTTGATTGGATTCTTTGGCTaGTGGACTGCTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LSAPGSHGLVLECILHHLIGFFG*WTAEKK
Trigger: CTTCTTCTCAGCAGTCCACCAGCCAAAGAATCCAAT...CAAATGGTGCAAAATGCATTCCAGTACGAGACCGTGGCTTCCTGGTGCAGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TTGTCTGCACCAGGAAGCCACGGTCTCGTACTGGAATGCATTTTGCACCATTTGTTCAGATACATGTACTaGGTAGGATACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSAPGSHGLVLECILHHLFRYMY*VGYTSG
Trigger: CCCAGAAGTGTATCCTACTCAGTACATGTATCTGAA...CAAATGGTGCAAAATGCATTCCAGTACGAGACCGTGGCTTCCTGGTGCAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCCAAAGGTCCTGTGTaGCTTTGTGACACACACATC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSAKGPV*LCDTHI
Trigger: GATGTGTGTGTCACAAAGTCACACAGGACCTTTGGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGCTCGTCCTTGGCTaGCACCTTCTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWLVLG*HLLFLV
Trigger: AACAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCTGCTTTTACTGCTTaGAGCTGGCTCGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWAAFTA*SWLVLG
Trigger: GCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCGTTTGGATTTGCTTTTaGCACAACCAGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLVWICF*HNQGED
Trigger: ATCCTCCCCCTGGTTGTGGCAAAAGCAAATCCAAAC...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTTGGAGATTCCGTCCTaGTCAGATTTCAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSLEIPS*SDFSLD
Trigger: ATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAA...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFIAVIA*SALGSL
Trigger: CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAAT...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TTTGTGACACACACATCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCTTCAAGTTTGTGTTGTaGTCACATCGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: FVTHTSSVLTVLEQVLRSFKFVL*SHRGSP
Trigger: TGGAGATCCACGATGTGAGCACAACACAAACTTGAA...GCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp CTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTGTACTGGAATGCATTTTaGACCATTTGGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLLEAGSSLADTFCFLYWNAF*TIWSKL
Trigger: CAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTA...CAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSAAYAF*RFRPAQ
Trigger: CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTCAGTTTTGGATGACTTaGGGGCACTGGAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCQFWMT*GHWSRT
Trigger: AGTCCTACTCCAGTGCCCCCAAGTCATCCAAAACTG...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSKLARP*LTPSVS
Trigger: AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
3UTR CAA 72 bp ATCCTTTTGAGATCCACAGGAAACGGAACCAGGATCTaGAAGCAATATCTCCACCACCATGTGCATTGTGGC +
Preference number: 4 (lower is better)
Translates to: ILLRSTGNGTRI*KQYLHHHVHCG
Trigger: GCCACAATGCACATGGTGGTGGAGATATTGCTTCAAGATCCTGGTTCCGTTTCCTGTGGATCTCAAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503888.5
CDS-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTATGGCTCCATATTCCCTaGGAGAAACTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLWLHIP*EKLHVA
Trigger: GGCCACATGCAGTTTCTCTCAGGGAATATGGAGCCA...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGGCTCCATATTCCCTaGGAGAAACTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWWLHIP*EKLHVA
Trigger: GGCCACATGCAGTTTCTCTCAGGGAATATGGAGCCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCACACATCATCAGTCTTaGCTGTGCTGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSTHHQS*LCWNKS
Trigger: GGACTTGTTCCAGCACAGTCAAGACTGATGATGTGT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp GGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATGGATACACATCATCAGTCTTaGCTGTGCTGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSKITTFLGDSNADLHMDTHHQS*LCWNKS
Trigger: GGACTTGTTCCAGCACAGTCAAGACTGATGATGTGT...ATCCATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCAGCATAGGGCCATTTTaGAACACATGTGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLSIGPF*NTCGSS
Trigger: TGATGAGCCACATGTGTTTCAAAATGGCCCTATGCT...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTCTTTTTCCTGGGGTTaGAGGCCAACATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSFSWG*RPTSED
Trigger: ATCCTCAGATGTTGGCCTTCAACCCCAGGAAAAAGA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS-3UTR TCA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTTCTTTTTCCTGGGGTTaGAGGCCAACATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSSFSWG*RPTSED
Trigger: ATCCTCAGATGTTGGCCTTCAACCCCAGGAAAAAGA...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGGCTGGTGGACTGCTaGGAAGAAGGAACTGATGTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWWLVDC*EEGTDV
Trigger: CACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCGGAGGATCTCTTTGTaGATGCCTCCTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSRRISL*MPPSCV
Trigger: TACACAAGAAGGAGGCATTCACAAAGAGATCCTCCG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTTTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCTTCCAGTTGTGGGTaGTTGTGCAGTTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWASSCG*LCSSPS
Trigger: TGATGGGGAACTGCACAAGCACCCACAACTGGAAGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTTTGGATTTGCTTTTaGCACAACCAGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVWICF*HNQGED
Trigger: ATCCTCCCCCTGGTTGTGGCAAAAGCAAATCCAAAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTCCGCAGCAGCTTATaGGTTTTGGAGATTCCGTCC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLRSSL*VLEIPS
Trigger: GGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTATTGCTGTCATAGCCTaGTCCGCCCTGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIIAVIA*SALGSL
Trigger: CAGCGATCCCAGGGCGGAGCAGGCTATGACAGCAAT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAGAGCCTCCTGCCCTCTaGGTTAGGTTCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLEPPAL*VRFLEK
Trigger: CTTTTCAAGGAACCTAACGCAGAGGGCAGGAGGCTC...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGAGCCTCCTGCCCTCTaGGTTAGGTTCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWEPPAL*VRFLEK
Trigger: CTTTTCAAGGAACCTAACGCAGAGGGCAGGAGGCTC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTTTAAGTTACGGCTTTaGAGGAATTGGGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: CCFYCLKLARPWLTPSVSFKLRL*RNWDCC
Trigger: ACAGCAATCCCAATTCCTGCAAAGCCGTAACTTAAA...AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTTGTGCTCACATCGTaGATCTCCAGAACAAGATCG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVVLTS*ISRTRS
Trigger: CGATCTTGTTCTGGAGATCCACGATGTGAGCACAAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTGTTGTGCTCACATCGTaGATCTCCAGAACAAGATCG +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCVVLTS*ISRTRS
Trigger: CGATCTTGTTCTGGAGATCCACGATGTGAGCACAAC...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp GACCTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTaGTGCTCACATCGTGGATCTCCAGAACAAGATCGA +
Preference number: 4 (lower is better)
Translates to: DLLNSLWGFKFV*CSHRGSPEQDR
Trigger: TCGATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp TGGTCAGTATTGGGGACAACCCATATCTCTCCATGTTaGTGCAGGTCAGATGAGGTGATCACTTCACATAAG +
Preference number: 4 (lower is better)
Translates to: WSVLGTTHISPC*CRSDEVITSHK
Trigger: CTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGAGTCAGAGTATCTaGAATCTGCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWSQSI*NLQTGS
Trigger: ACTGCCTGTTTGCAGATTTCAGATACTCTGACTCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTGGAGTCAGAGTATCTaGAATCTGCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHWSQSI*NLQTGS
Trigger: ACTGCCTGTTTGCAGATTTCAGATACTCTGACTCCA...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507812.5
ENST00000510303.6
CDS-3UTR TCA 90 bp CATTGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCTGGAGTCAGAGTATCTaGAATCTGCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HCHLQNLPPLYYSVLIPPWSQSI*NLQTGS
Trigger: ACTGCCTGTTTGCAGATTTCAGATACTCTGACTCCA...GGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507812.5
ENST00000510303.6
CDS-3UTR TCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTTGGCTCCATATTCCCTaGGAGAAACTGCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFWLHIP*EKLHVA
Trigger: GGCCACATGCAGTTTCTCTCAGGGAATATGGAGCCA...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTCCTGTGTGACTTTGTaGCACACACATCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSCVTL*HTHHQS
Trigger: AGACTGATGATGTGTGTGTCACAAAGTCACACAGGA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCCAAAGGTCCTGTGTaGCTTTGTGACACACACATC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWAKGPV*LCDTHI
Trigger: GATGTGTGTGTCACAAAGTCACACAGGACCTTTGGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATGCCAAAGGTCCTGTGTaGCTTTGTGACACACACATC +
Preference number: 4 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHAKGPV*LCDTHI
Trigger: GATGTGTGTGTCACAAAGTCACACAGGACCTTTGGC...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAGCATAGGGCCATTTTaGAACACATGTGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSIGPF*NTCGSS
Trigger: TGATGAGCCACATGTGTTTCAAAATGGCCCTATGCT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAGTAGATCTACCACCTaGGCTCCAGTTGCTATTTCA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSRSTT*APVAIS
Trigger: TGAAATAGCAACTGGAGCTCAGGTGGTAGATCTACT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS-3UTR TCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTTTGAAGGCCAACATCTaGGGATCATTAGGATCTACC +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCLKANI*GSLGST
Trigger: GGTAGATCCTAATGATCCTCAGATGTTGGCCTTCAA...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGGCTCGTCCTTGGCTaGCACCTTCTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWWLVLG*HLLFLV
Trigger: AACAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTATTTAGACGGTAGATaGCCCAATGTTGAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYLDGR*PNVECP
Trigger: GGGACACTCAACATTGGGTCATCTACCGTCTAAATA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp TCTCTAACTGCTGACAAATCAGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCACCTGTTGCTATTCTATaGAAAATTACTGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: SLTADKSASSCGCLCSSPPVAIL*KITGIG
Trigger: GCCAATACCAGTAATTTTTCATAGAATAGCAACAGG...TGGGGAACTGCACAAGCACCCACAACTGGAAGCTGATTTGTCAGCAGTTAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503707.6
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCCCTGAGAGAAACTaGATGTGGCCCATATATCTC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFPERN*MWPIYL
Trigger: GAGATATATGGGCCACATGCAGTTTCTCTCAGGGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTTGTGCGATTTAATTaGTGTCATAGCCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFVRFN*CHSLLR
Trigger: GCGGAGCAGGCTATGACAGCAATTAAATCGCACAAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGGTCTCGTACTGGAATaGATTTTGCACCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSGLVLE*ILHHLE
Trigger: CTCCAAATGGTGCAAAATGCATTCCAGTACGAGACC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TTTGGCTGGTGGACTGCTGAGAAGAAGGAACTGATGTGGAGTATGCATAAACTTGGTCTCGTACTGGAATaGATTTTGCACCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: FGWWTAEKKELMWSMHKLGLVLE*ILHHLE
Trigger: CTCCAAATGGTGCAAAATGCATTCCAGTACGAGACC...AAGTTTATGCATACTCCACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCAAACTCAATTGTCTaGACCAGGAAGCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWANSIV*TRKPRS
Trigger: AGACCGTGGCTTCCTGGTGCAGACAATTGAGTTTGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCCTCAGGATGGAGTaGCAGTTTTCAATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFLRME*QFSMCE
Trigger: CTCACACATTGAAAACTGGCACTCCATCCTGAGGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTATTGCTGCTTTTACTaGTTGAAGCTGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYCCFY*LKLARP
Trigger: AGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSISPCL*RSDEVI
Trigger: GATCACCTCATCTGACCTGCACAAACATGGAGAGAT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp GGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATGGATATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: GSKITTFLGDSNADLHMDISPCL*RSDEVI
Trigger: GATCACCTCATCTGACCTGCACAAACATGGAGAGAT...ATCCATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWAAYAF*RFRPAQ
Trigger: CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCAGTTTTGGATGACTTaGGGGCACTGGAGTAGGACT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWQFWMT*GHWSRT
Trigger: AGTCCTACTCCAGTGCCCCCAAGTCATCCAAAACTG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCATTGGATTCTTTGGCTaGTGGACTGCTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSIGFFG*WTAEKK
Trigger: CTTCTTCTCAGCAGTCCACCAGCCAAAGAATCCAAT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWKLARP*LTPSVS
Trigger: AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TTTGGCTGGTGGACTGCTGAGAAGAAGGAACTGATGTGGAGTATGCATAAACTTAGACATGGTCAGTATTaGGGACAACCCATATCTCTC +
Preference number: 4 (lower is better)
Translates to: FGWWTAEKKELMWSMHKLRHGQY*GQPISL
Trigger: GAGAGATATGGGTTGTCCCCAATACTGACCATGTCT...AAGTTTATGCATACTCCACATCAGTTCCTTCTTCTCAGCAGTCCACCAGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTACTCTACAGAGCTTATTaGAGGTGCCTCAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLLYRAY*RCLSGP
Trigger: AGGACCACTGAGGCACCTCCAATAAGCTCTGTAGAG...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR CAA 72 bp AGTAAGACCTGCTTAACAGTTTATGGGGCTTCAAGTTaGTGTTGTGCTCACATCGTGGATCTCCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: SKTCLTVYGASS*CCAHIVDLQNK
Trigger: CTTGTTCTGGAGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAGGTCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCAGATACATGTACTaGGTAGGATACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFRYMY*VGYTSG
Trigger: CCCAGAAGTGTATCCTACTCAGTACATGTATCTGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTCAGATACATGTACTaGGTAGGATACACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHFRYMY*VGYTSG
Trigger: CCCAGAAGTGTATCCTACTCAGTACATGTATCTGAA...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510303.6
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGACACATCATCAGTCTTaGCTGTGCTGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWTHHQS*LCWNKS
Trigger: GGACTTGTTCCAGCACAGTCAAGACTGATGATGTGT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCTGAGAAGAAGGAACTaGTGTGGAGTATGCATAAAC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLRRRN*CGVCIN
Trigger: GTTTATGCATACTCCACATCAGTTCCTTCTTCTCAG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTCTGAGAAGAAGGAACTaGTGTGGAGTATGCATAAAC +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCLRRRN*CGVCIN
Trigger: GTTTATGCATACTCCACATCAGTTCCTTCTTCTCAG...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCCAGTTTTCAATGTGTaGGCCATGAAATGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSPVFNV*AMKCKG
Trigger: ACCTTTGCATTTCATGGCTCACACATTGAAAACTGG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCGGAGGATCTCTTTGTaGATGCCTCCTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWRRISL*MPPSCV
Trigger: TACACAAGAAGGAGGCATTCACAAAGAGATCCTCCG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCAGCAATCCTTTTaGGATCCACAGGAAACGGAA +
Preference number: 4 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHFQQSF*DPQETE
Trigger: TTCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAA...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
CDS-3UTR GCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAGTTTGGATTTGCTTTTaGCACAACCAGGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLVWICF*HNQGED
Trigger: ATCCTCCCCCTGGTTGTGGCAAAAGCAAATCCAAAC...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCATTTCAGTTTGGATTTaGTTTTGCCACAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSISVWI*FCHNQG
Trigger: CCCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAAT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTATTTCAGTTTGGATTTaGTTTTGCCACAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LEATTRPFLRMECQFSMCISVWI*FCHNQG
Trigger: CCCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAAT...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCAAGTTTGTGTTGTaGTCACATCGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFKFVL*SHRGSP
Trigger: TGGAGATCCACGATGTGAGCACAACACAAACTTGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTACTGGAATGCATTTTaGACCATTTGGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYWNAF*TIWSKL
Trigger: CAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TTTGTGACACACACATCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCAGTTATGCTATCCAGTaGTTTCATTACTCGATCATA +
Preference number: 4 (lower is better)
Translates to: FVTHTSSVLTVLEQVLRSSYAIQ*FHYSII
Trigger: TATGATCGAGTAATGAAAGCACTGGATAGCATAACT...GCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCACTTCCATACATTaGACCATGGAGCTGCAATCG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWSTSIH*TMELQS
Trigger: CGATTGCAGCTCCATGGTGCAATGTATGGAAGTGGA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTCCAGAACAAGATCTTGTGTATTAATATTTaGATCTCCCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: YGASSLCCAHIVDLQNKILCINI*ISHLAV
Trigger: GACGGCCAAGTGGGAGATGCAAATATTAATACACAA...GATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGAAAGACATCAACAGTaGGCACTGGGCCATTTAAAT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSERHQQ*ALGHLN
Trigger: ATTTAAATGGCCCAGTGCCCACTGTTGATGTCTTTC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
CDS-3UTR CCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAAGGGGGAGGATAACTTaGCGACCTGCGCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKRGRIT*RPAQSR
Trigger: TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCT...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGTTGTGCTCACATCGTaGATCTCCAGAACAAGATCG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWVVLTS*ISRTRS
Trigger: CGATCTTGTTCTGGAGATCCACGATGTGAGCACAAC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp ATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCCTCCTGCTTAACAGTTTATaGGGCTTCAAGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: IAPWSCNRVLEATTRPFLLLNSL*GFKFVL
Trigger: CAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG...GAGGAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCCACGGTCTCGTACTaGAATGCATTTTGCACCATT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWATVSY*NAFCTI
Trigger: AATGGTGCAAAATGCATTCCAGTACGAGACCGTGGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCCATACATTGCACCATaGAGCTGCAATCGTGTATTA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSPYIAP*SCNRVL
Trigger: TAATACACGATTGCAGCTCCATGGTGCAATGTATGG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
3UTR CAA 72 bp GCCTCCTTCTTGTGTATTAATATTTGCATCTCCCACTaGGCCGTCTTCATAGACGAAAAAGAATCGTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASFLCINICISH*AVFIDEKESCA
Trigger: TGCACACGATTCTTTTTCGTCTATGAAGACGGCCAAGTGGGAGATGCAAATATTAATACACAAGAAGGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515166.5
3UTR CAA 72 bp AATTACTCGGAGGATCTCTTTGTGAATGCCTCCTTCTaGTGTATTAATATTTGCATCTCCCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: NYSEDLFVNASF*CINICISHLAV
Trigger: GACGGCCAAGTGGGAGATGCAAATATTAATACACAAGAAGGAGGCATTCACAAAGAGATCCTCCGAGTAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp AGTTCACCTGCCCTCCGTAATAAAATTCTTCGGAATCATTGTCACCTTCAGAATTGGAGTCAGAGTATCTaGAATCTGCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSPALRNKILRNHCHLQNWSQSI*NLQTGS
Trigger: ACTGCCTGTTTGCAGATTTCAGATACTCTGACTCCA...ATTCTGAAGGTGACAATGATTCCGAAGAATTTTATTACGGAGGGCAGGTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503707.6
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGGAGTCAGAGTATCTaGAATCTGCAAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWWSQSI*NLQTGS
Trigger: ACTGCCTGTTTGCAGATTTCAGATACTCTGACTCCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp CATTGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCTGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: HCHLQNLPPLYYSVLIPPCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...GGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR TCA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR TCA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATTCCTGTGTGACTTTGTaGCACACACATCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHSCVTL*HTHHQS
Trigger: AGACTGATGATGTGTGTGTCACAAAGTCACACAGGA...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAGCCAAAGGTCCTGTGTaGCTTTGTGACACACACATC +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLAKGPV*LCDTHI
Trigger: GATGTGTGTGTCACAAAGTCACACAGGACCTTTGGC...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGGAGTAGGACTTGCTaGGCAATTTGTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSWSRTC*AICDFS
Trigger: TGAAAAATCACAAATTGCTCAGCAAGTCCTACTCCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATTGGAGTAGGACTTGCTaGGCAATTTGTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHWSRTC*AICDFS
Trigger: TGAAAAATCACAAATTGCTCAGCAAGTCCTACTCCA...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAGCATAGGGCCATTTTaGAACACATGTGGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWSIGPF*NTCGSS
Trigger: TGATGAGCCACATGTGTTTCAAAATGGCCCTATGCT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAAGTAGATCTACCACCTaGGCTCCAGTTGCTATTTCA +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLSRSTT*APVAIS
Trigger: TGAAATAGCAACTGGAGCTCAGGTGGTAGATCTACT...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTATTGAAGGCCAACATCTaGGGATCATTAGGATCTACC +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLLKANI*GSLGST
Trigger: GGTAGATCCTAATGATCCTCAGATGTTGGCCTTCAA...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTGAAGGCCAACATCTaGGGATCATTAGGATCTACC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLKANI*GSLGST
Trigger: GGTAGATCCTAATGATCCTCAGATGTTGGCCTTCAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTGGCTCGTCCTTGGCTaGCACCTTCTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIWLVLG*HLLFLV
Trigger: AACAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCGAGTCAATAGTCTATaGGACTTTAGAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSRVNSL*DFRVRH
Trigger: ATGCCTAACTCTAAAGTCGCATAGACTATTGACTCG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGCAAACTCAATTGTCTaGACCAGGAAGCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKANSIV*TRKPRS
Trigger: AGACCGTGGCTTCCTGGTGCAGACAATTGAGTTTGC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTCCTCAGGATGGAGTaGCAGTTTTCAATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFLRME*QFSMCE
Trigger: CTCACACATTGAAAACTGGCACTCCATCCTGAGGAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTATTGCTGCTTTTACTaGTTGAAGCTGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWYCCFY*LKLARP
Trigger: AGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCACTGTGATGTATTGCTaGTTTTACTGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSTVMYC*FYCLKL
Trigger: CAGCTTCAAGCAGTAAAAGCAGCAATACATCACAGT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTTAAGTTACGGCTTTaGAGGAATTGGGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFKLRL*RNWDCC
Trigger: ACAGCAATCCCAATTCCTGCAAAGCCGTAACTTAAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTGTGTATTAATATTTaGATCTCCCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLCINI*ISHLAV
Trigger: GACGGCCAAGTGGGAGATGCAAATATTAATACACAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp GTTCACCTGCCCTCCGTAATAAAATTCTTCGGAATCATTGTCACCTTCAGAATCTTACCTGAGAGAAACTaGATGTGGCCCATATATCTC +
Preference number: 4 (lower is better)
Translates to: VHLPSVIKFFGIIVTFRILPERN*MWPIYL
Trigger: GAGATATATGGGCCACATGCAGTTTCTCTCAGGTAA...GATTCTGAAGGTGACAATGATTCCGAAGAATTTTATTACGGAGGGCAGGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503193.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCTCAGATTTCAGTTTaGATTTGCTTTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSAQISV*ICFCHN
Trigger: GTTGTGGCAAAAGCAAATCCAAACTGAAATCTGAGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAGCAGCTTATGCGTTTTaGAGATTCCGTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLAAYAF*RFRPAQ
Trigger: CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGC...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGATTGGATTCTTTGGCTaGTGGACTGCTGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWIGFFG*WTAEKK
Trigger: CTTCTTCTCAGCAGTCCACCAGCCAAAGAATCCAAT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTAAGCTGGCTCGTCCTTaGCTGACACCTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIKLARP*LTPSVS
Trigger: AGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAGACATGGTCAGTATTaGGGACAACCCATATCTCTC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWRHGQY*GQPISL
Trigger: GAGAGATATGGGTTGTCCCCAATACTGACCATGTCT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCATGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TTEGYGSKITTFLGDSNACTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTACACATCATCAGTCTTaGCTGTGCTGGAACAAGTCC +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCITHHQS*LCWNKS
Trigger: GGACTTGTTCCAGCACAGTCAAGACTGATGATGTGT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTCTTTTTCCTGGGGTTaGAGGCCAACATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCISFSWG*RPTSED
Trigger: ATCCTCAGATGTTGGCCTTCAACCCCAGGAAAAAGA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTATCCATTTGCTTCTTaGTTTCCAGATATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYPFAS*FPDMVL
Trigger: AAGCACCATATCTGGAAATCAAGAAGCAAATGGATA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTTATCCATTTGCTTCTTaGTTTCCAGATATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSYPFAS*FPDMVL
Trigger: AAGCACCATATCTGGAAATCAAGAAGCAAATGGATA...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTGAGAAGAAGGAACTaGTGTGGAGTATGCATAAAC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLRRRN*CGVCIN
Trigger: GTTTATGCATACTCCACATCAGTTCCTTCTTCTCAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCCAGTTTTCAATGTGTaGGCCATGAAATGCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWPVFNV*AMKCKG
Trigger: ACCTTTGCATTTCATGGCTCACACATTGAAAACTGG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTACGGAGGATCTCTTTGTaGATGCCTCCTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLRRISL*MPPSCV
Trigger: TACACAAGAAGGAGGCATTCACAAAGAGATCCTCCG...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTTCAAAATCCAGCTTTaGACCCGAGGAAGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIFKIQL*TRGRLS
Trigger: CGAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTGAAAAGGAAATGCTaGGAGCTGGTGTTACTGTTC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLKRKC*ELVLLF
Trigger: GAACAGTAACACCAGCTCTCAGCATTTCCTTTTCAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
CDS-3UTR GCA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTAATTGGATTTTTCTTTaGTCTGTTTCCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSNWIFL*SVSTAV
Trigger: CACAGCAGTGGAAACAGAGCAAAGAAAAATCCAATT...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGATTTCAGTTTGGATTTaGTTTTGCCACAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWISVWI*FCHNQG
Trigger: CCCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAAT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTGGAGATTCCGTCCTaGTCAGATTTCAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLEIPS*SDFSLD
Trigger: ATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTCAAGTTTGTGTTGTaGTCACATCGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFKFVL*SHRGSP
Trigger: TGGAGATCCACGATGTGAGCACAACACAAACTTGAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTACTGGAATGCATTTTaGACCATTTGGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWYWNAF*TIWSKL
Trigger: CAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGATTTCCAGATATGGTaGTTGTGTCATTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSDFQIW*LCHFSD
Trigger: ATCAGAGAAATGACACAAGCACCATATCTGGAAATC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATCCACTTCCATACATTaGACCATGGAGCTGCAATCG +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLSTSIH*TMELQS
Trigger: CGATTGCAGCTCCATGGTGCAATGTATGGAAGTGGA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCGAAAAAGAATCGTGTaGAGACATGGTCAGTATTGG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWRKRIV*RHGQYW
Trigger: CCAATACTGACCATGTCTGCACACGATTCTTTTTCG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTACTTGAATATCCAGTCTaGCATTCCAGTGTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLLEYPV*HSSVAV
Trigger: AACTGCTACACTGGAATGGCAGACTGGATATTCAAG...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTTCTGAGCTCCAGTTaGTATTTCATCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFLSSS*YFISSF
Trigger: GAAGCTGCTGATGAAATAGCAACTGGAGCTCAGAAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514067.6
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGAAAGACATCAACAGTaGGCACTGGGCCATTTAAAT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWERHQQ*ALGHLN
Trigger: ATTTAAATGGCCCAGTGCCCACTGTTGATGTCTTTC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGACGCAGACCTACACATaGATACTAGTAGATCTACCA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWTQTYT*ILVDLP
Trigger: TGGTAGATCTACTAGTATCCATGTGTAGGTCTGCGT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTACCACAGAAGGATATaGCTCGAAAATCACAACTTT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYHRRI*LENHNF
Trigger: AAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGTA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCTTGATTTCCAGATATaGTGCTTGTGTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLDFQI*CLCHFS
Trigger: AGAGAAATGACACAAGCACCATATCTGGAAATCAAG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCCATACATTGCACCATaGAGCTGCAATCGTGTATTA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWPYIAP*SCNRVL
Trigger: TAATACACGATTGCAGCTCCATGGTGCAATGTATGG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAACTGCTTTCATGAATaGCCTTATTCCAAAGACAAC +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSNCFHE*PYSKDN
Trigger: GTTGTCTTTGGAATAAGGCCATTCATGAAAGCAGTT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp CAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCTTTTTGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QNLPPLYYSVLIPPHFPFCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...AAAAGGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTCCTGTGTGACTTTGTaGCACACACATCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCISCVTL*HTHHQS
Trigger: AGACTGATGATGTGTGTGTCACAAAGTCACACAGGA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTATGGAGTAGGACTTGCTaGGCAATTTGTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLWSRTC*AICDFS
Trigger: TGAAAAATCACAAATTGCTCAGCAAGTCCTACTCCA...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGGAGTAGGACTTGCTaGGCAATTTGTGATTTTTCA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWWSRTC*AICDFS
Trigger: TGAAAAATCACAAATTGCTCAGCAAGTCCTACTCCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTAAACGGTCTTTCTTaGGTCTTACGAGTTACCGTT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLNGLS*VLRVTV
Trigger: AACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATTCCCTGAGAGAAACTaGATGTGGCCCATATATCTC +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLFPERN*MWPIYL
Trigger: GAGATATATGGGCCACATGCAGTTTCTCTCAGGGAA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCATTTGTGCGATTTAATTaGTGTCATAGCCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: DNSVQISKLYGPAWILEAFVRFN*CHSLLR
Trigger: GCGGAGCAGGCTATGACAGCAATTAAATCGCACAAA...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTACGAGTCAATAGTCTATaGGACTTTAGAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLRVNSL*DFRVRH
Trigger: ATGCCTAACTCTAAAGTCGCATAGACTATTGACTCG...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCGAGTCAATAGTCTATaGGACTTTAGAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWRVNSL*DFRVRH
Trigger: ATGCCTAACTCTAAAGTCGCATAGACTATTGACTCG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATCGAGTCAATAGTCTATaGGACTTTAGAGTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHRVNSL*DFRVRH
Trigger: ATGCCTAACTCTAAAGTCGCATAGACTATTGACTCG...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAGGTCTCGTACTGGAATaGATTTTGCACCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: DNSVQISKLYGPAWILEAGLVLE*ILHHLE
Trigger: CTCCAAATGGTGCAAAATGCATTCCAGTACGAGACC...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAGTTATGCTATCCAGTaGTTTCATTACTCGATCATA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSYAIQ*FHYSII
Trigger: TATGATCGAGTAATGAAAGCACTGGATAGCATAACT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp ACCACAGAAGGATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGATTTCCAGATATGGTaGTTGTGTCATTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TTEGYGSKITTFLGDSNADFQIW*LCHFSD
Trigger: ATCAGAGAAATGACACAAGCACCATATCTGGAAATC...TGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATTCCTCAGGATGGAGTaGCAGTTTTCAATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKFLRME*QFSMCE
Trigger: CTCACACATTGAAAACTGGCACTCCATCCTGAGGAA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTATTGCTGCTTTTACTaGTTGAAGCTGGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIYCCFY*LKLARP
Trigger: AGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCAATA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGACTGTGATGTATTGCTaGTTTTACTGCTTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWTVMYC*FYCLKL
Trigger: CAGCTTCAAGCAGTAAAAGCAGCAATACATCACAGT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTTAAGTTACGGCTTTaGAGGAATTGGGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFKLRL*RNWDCC
Trigger: ACAGCAATCCCAATTCCTGCAAAGCCGTAACTTAAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCTTCACATAAGGCTATaGATTTTAAGTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLHIRL*ILSYGF
Trigger: AAAGCCGTAACTTAAAATGCATAGCCTTATGTGAAG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATC +
Preference number: 4 (lower is better)
Translates to: DNSVQISKLYGPAWILEAISPCL*RSDEVI
Trigger: GATCACCTCATCTGACCTGCACAAACATGGAGAGAT...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAAAATGTGCTTCAAATaGCACCATGAAATCCGTATT +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSKMCFK*HHEIRI
Trigger: AATACGGATTTCATGGTGGCATTTGAAGCACATTTT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TTGTGTTGTGCTCACATCGTGGATCTCCAGAACAAGATCGAGTCAATAGTCTATTGTGTAACAAATGTCTaGATGATTCTGGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: LCCAHIVDLQNKIESIVYCVTNV*MILGHL
Trigger: TAAATGGCCCAGAATCATGCAGACATTTGTTACACA...ATAGACTATTGACTCGATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCTCAGATTTCAGTTTaGATTTGCTTTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWAQISV*ICFCHN
Trigger: GTTGTGGCAAAAGCAAATCCAAACTGAAATCTGAGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTGCTTAACAGTTTATaGGGCTTCAAGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLLNSL*GFKFVL
Trigger: CAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATACGCAGACCTACACATaGATACTAGTAGATCTACCA +
Preference number: 4 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNTQTYT*ILVDLP
Trigger: TGGTAGATCTACTAGTATCCATGTGTAGGTCTGCGT...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAAGAAGGAACTGATGTaGAGTATGCATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSKKELM*SMHKLQ
Trigger: TTGAAGTTTATGCATACTCCACATCAGTTCCTTCTT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTCCATACATTGCACCATaGAGCTGCAATCGTGTATTA +
Preference number: 4 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFPYIAP*SCNRVL
Trigger: TAATACACGATTGCAGCTCCATGGTGCAATGTATGG...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAGACATGGTCAGTATTaGGGACAACCCATATCTCTC +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLRHGQY*GQPISL
Trigger: GAGAGATATGGGTTGTCCCCAATACTGACCATGTCT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp TGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATAGTATTCACAATAGCTaGGTAATCTTCAGATACATG +
Preference number: 4 (lower is better)
Translates to: CHLQNLPPLYYSVLIPPHSIHNS*VIFRYM
Trigger: CATGTATCTGAAGATTACCCAGCTATTGTGAATACT...ATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
3UTR CAA 72 bp GTTTGTATTATGCCAATTTTCCTTAAACGGTCTTTCTaGAGTCTTACGAGTTACCGTTCCAGTTCAGACTCC +
Preference number: 4 (lower is better)
Translates to: VCIMPIFLKRSF*SLTSYRSSSDS
Trigger: GGAGTCTGAACTGGAACGGTAACTCGTAAGACTCAAGAAAGACCGTTTAAGGAAAATTGGCATAATACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR CAA 72 bp CTTGACACATATGTATTATCCATTTCAGCAATCCTTTaGAGATCCACAGGAAACGGAACCAGGATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LDTYVLSISAIL*RSTGNGTRILK
Trigger: CTTCAAGATCCTGGTTCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAATGGATAATACATATGTGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503888.5
CDS-3UTR TCA 90 bp GACACATATGTATTATCCATTTCAGCAATCCTTTTGAGATCCACAGGAAACGGATGTACTATTCTGTCTTaGTTCCTCCCCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: DTYVLSISAILLRSTGNGCTILS*FLPIFL
Trigger: AAGGAAAATGGGGAGGAATCAAGACAGAATAGTACA...TCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAATGGATAATACATATGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503888.5
CDS-3UTR TCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTATCCATTTGCTTCTTaGTTTCCAGATATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWYPFAS*FPDMVL
Trigger: AAGCACCATATCTGGAAATCAAGAAGCAAATGGATA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR TCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAAAACACAGTTGAAGTaGTTTGGGAGACTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLKTQLK*FGRLAA
Trigger: TGCTGCAAGTCTCCCAAATCACTTCAACTGTGTTTT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATTGTCCAGAAGTAACTaGCAACATCTGTGTCCAGTA +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKLSRSN*QHLCPV
Trigger: TACTGGACACAGATGTTGTCAGTTACTTCTGGACAA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAAATATTTGGCCTTACTaGTCTCTTGGCAGTATTTAC +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLNIWPY*SLGSIY
Trigger: GTAAATACTGCCAAGAGATCAGTAAGGCCAAATATT...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAATTGGATTTTTCTTTaGTCTGTTTCCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWNWIFL*SVSTAV
Trigger: CACAGCAGTGGAAACAGAGCAAAGAAAAATCCAATT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTATTTCAGTTTGGATTTaGTTTTGCCACAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIISVWI*FCHNQG
Trigger: CCCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAAT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATTGGAGATTCCGTCCTaGTCAGATTTCAGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKLEIPS*SDFSLD
Trigger: ATCCAAACTGAAATCTGAGCAGGACGGAATCTCCAA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATACTGGAATGCATTTTaGACCATTTGGAGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLYWNAF*TIWSKL
Trigger: CAGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGATTTCCAGATATGGTaGTTGTGTCATTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWDFQIW*LCHFSD
Trigger: ATCAGAGAAATGACACAAGCACCATATCTGGAAATC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGCATAAACTTCAATTaGCTGTTAACTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWCINFN*LLTGSF
Trigger: GAAACTGCCAGTTAACAGGCAATTGAAGTTTATGCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCACGAAAAAGAATCGTGTaGAGACATGGTCAGTATTGG +
Preference number: 4 (lower is better)
Translates to: DNSVQISKLYGPAWILEARKRIV*RHGQYW
Trigger: CCAATACTGACCATGTCTGCACACGATTCTTTTTCG...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGTGGATTTTGAATTATaGTGGAGGCACTCTACAGAG +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKVDFEL*WRHSTE
Trigger: CTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCAC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATGCTCAGATTTCAGTTTaGATTTGCTTTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNAQISV*ICFCHN
Trigger: GTTGTGGCAAAAGCAAATCCAAACTGAAATCTGAGC...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTTGATTTCCAGATATaGTGCTTGTGTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLDFQI*CLCHFS
Trigger: AGAGAAATGACACAAGCACCATATCTGGAAATCAAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAACCATACATTGCACCATaGAGCTGCAATCGTGTATTA +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKPYIAP*SCNRVL
Trigger: TAATACACGATTGCAGCTCCATGGTGCAATGTATGG...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTACATTCGCTACAATGTTaGAACTATTACAAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLHSLQC*NYYKAG
Trigger: TCCAGCTTTGTAATAGTTCCAACATTGTAGCGAATG...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp TCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTAGTATTCACAATAGCTaGGTAATCTTCAGATACATG +
Preference number: 4 (lower is better)
Translates to: SPSESSSTVLFCLDSSPFSIHNS*VIFRYM
Trigger: CATGTATCTGAAGATTACCCAGCTATTGTGAATACT...AAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTAAATGCCAAAATGCTTaGATATCCAGTCTGCCATTC +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIKCQNA*ISSLPF
Trigger: GAATGGCAGACTGGATATTCAAGCATTTTGGCATTT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAGTTATGCTATCCAGTaGTTTCATTACTCGATCATA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWSYAIQ*FHYSII
Trigger: TATGATCGAGTAATGAAAGCACTGGATAGCATAACT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR GCA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTTGCATAAACTTCAATTaGCTGTTAACTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGCINFN*LLTGSF
Trigger: GAAACTGCCAGTTAACAGGCAATTGAAGTTTATGCA...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATTGTGTATTAATATTTaGATCTCCCACTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLLCINI*ISHLAV
Trigger: GACGGCCAAGTGGGAGATGCAAATATTAATACACAA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTGCTCAGATTTCAGTTTaGATTTGCTTTTGCCACAAC +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIAQISV*ICFCHN
Trigger: GTTGTGGCAAAAGCAAATCCAAACTGAAATCTGAGC...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTCTGCTTAACAGTTTATaGGGCTTCAAGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCILLNSL*GFKFVL
Trigger: CAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTTACCACAGAAGGATATaGCTCGAAAATCACAACTTT +
Preference number: 4 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGYHRRI*LENHNF
Trigger: AAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGTA...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp CCTTTAACCAGTAGCAGTTTGATTACCAATTACTCGGAGGATCTCTTTGTGAATCTTGATTTCCAGATATaGTGCTTGTGTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: PLTSSSLITNYSEDLFVNLDFQI*CLCHFS
Trigger: AGAGAAATGACACAAGCACCATATCTGGAAATCAAG...ATTCACAAAGAGATCCTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAAGAAGGAACTGATGTaGAGTATGCATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWKKELM*SMHKLQ
Trigger: TTGAAGTTTATGCATACTCCACATCAGTTCCTTCTT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CCA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAATGGATTAGGTCAGTaGATTTTGAATTATGCTGGA +
Preference number: 4 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWNGLGQ*ILNYAG
Trigger: TCCAGCATAATTCAAAATCCACTGACCTAATCCATT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATTCCAGTGTAGCAGTTaGGTGTTTTCATCCTTTAAC +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLFQCSS*VFSSFN
Trigger: GTTAAAGGATGAAAACACCCAACTGCTACACTGGAA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATATCCATTTGCTTCTTaGTTTCCAGATATGGTGCTT +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLYPFAS*FPDMVL
Trigger: AAGCACCATATCTGGAAATCAAGAAGCAAATGGATA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR TCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTAACCAAACGTATGACTaGGATTTACTAAGCAACAAG +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCINQTYD*DLLSNK
Trigger: CTTGTTGCTTAGTAAATCTCAGTCATACGTTTGGTT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAATTGGATTTTTCTTTaGTCTGTTTCCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLNWIFL*SVSTAV
Trigger: CACAGCAGTGGAAACAGAGCAAAGAAAAATCCAATT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTGATTTCCAGATATGGTaGTTGTGTCATTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIDFQIW*LCHFSD
Trigger: ATCAGAGAAATGACACAAGCACCATATCTGGAAATC...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAATGCATAAACTTCAATTaGCTGTTAACTGGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKCINFN*LLTGSF
Trigger: GAAACTGCCAGTTAACAGGCAATTGAAGTTTATGCA...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR GCA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAATAAATGACTGCCTTTaGTCAGTGGGTTACTATCTA +
Preference number: 4 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKINDCL*SVGYYL
Trigger: TAGATAGTAACCCACTGAGCAAAGGCAGTCATTTAT...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATACCACAGAAGGATATaGCTCGAAAATCACAACTTT +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLYHRRI*LENHNF
Trigger: AAAGTTGTGATTTTCGAGCCATATCCTTCTGTGGTA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTACTTGATTTCCAGATATaGTGCTTGTGTCATTTCTCT +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLLDFQI*CLCHFS
Trigger: AGAGAAATGACACAAGCACCATATCTGGAAATCAAG...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTAAGAAGGAACTGATGTaGAGTATGCATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIKKELM*SMHKLQ
Trigger: TTGAAGTTTATGCATACTCCACATCAGTTCCTTCTT...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CCA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAGACCTGCTTGGATTTTaGAAGCACATTTATATGTTA +
Preference number: 4 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLDLLGF*KHIYML
Trigger: TAACATATAAATGTGCTTCCAAAATCCAAGCAGGTC...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
3UTR CAA 72 bp TTGTTTCAAATAATTCATTGGGTGTTAACCCTGACATaGTTACCAGTGACTGAAATATCCATGTTACCACAT +
Preference number: 4 (lower is better)
Translates to: LFQIIHWVLTLT*LPVTEISMLPH
Trigger: ATGTGGTAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAATTATTTGAAACAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TGGAACAAGTCCTCCGCAGCAGCTTATGCGTTTTGGAGATTCCGTCCTGCTCAGTGCTGCTTTTACTGCTaGAAGCTGGCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: WNKSSAAAYAFWRFRPAQCCFYC*KLARPW
Trigger: CCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA...CTGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCTGCGGAGGACTTGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TTTGCTTTTGCCACAACCAGGGGGAGGATAACTTGGCGACCTGCGCAAAGTAGAGTTCAGCAAACTCAATaGTCTGCACCAGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: FAFATTRGRITWRPAQSRVQQTQ*SAPGSH
Trigger: GTGGCTTCCTGGTGCAGACAATTGAGTTTGCTGAAC...TCTACTTTGCGCAGGTCGCCAAGTTATCCTCCCCCTGGTTGTGGCAAAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCCCTCCCTGTACTATTCTGTCTaGATTCCTCCCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: SFQLWVLVQFPIIVHLPSLYYSV*IPPHFP
Trigger: AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAG...GGAGGGCAGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503193.5
CDS TCA 90 bp TTCCCTGAGAGAAACTGCATGTGGCCCATATATCTCTCTAACTGCTaGCAAATCAGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATC +
Preference number: 5 (lower is better)
Translates to: FPERNCMWPIYLSNC*QISFQLWVLVQFPI
Trigger: GATGGGGAACTGCACAAGCACCCACAACTGGAAGCTGATTTGTCAGCAGTTAGAGAGATATATGGGCCACATGCAGTTTCTCTCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281631.10
ENST00000503561.7
ENST00000503790.6
ENST00000505554.5
ENST00000505697.6
ENST00000511363.6
ENST00000514067.6
ENST00000514342.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCCCTCCAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: SFQLWVLVQFPIIVHLPSNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...GGAGGGCAGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503193.5
ENST00000503707.6
CDS-3UTR CAA 90 bp TGTGGCCCATATATCTCTCTAACTGCTGACAAATCAGCTTCCAGTTGTGGGTGCCAAATCAGCTTCCAGTaGTGGGTGCTTGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: CGPYISLTADKSASSCGCQISFQ*WVLVQF
Trigger: GAACTGCACAAGCACCCACAACTGGAAGCTGATTTG...GCACCCACAACTGGAAGCTGATTTGTCAGCAGTTAGAGAGATATATGGGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503193.5
ENST00000503707.6
CDS-3UTR CAA 90 bp TTTGTGACACACACATCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCGGCTTCAAGTTTGTGTaGTGCTCACATCGTGGATCT +
Preference number: 5 (lower is better)
Translates to: FVTHTSSVLTVLEQVLRSGFKFV*CSHRGS
Trigger: AGATCCACGATGTGAGCACAACACAAACTTGAAGCC...GCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TTTGTGACACACACATCATCAGTCTTGACTGTGCTGGAACAAGTCCTCCGCAGCGATTTCAGTTTGGATTaGCTTTTGCCACAACCAGGG +
Preference number: 5 (lower is better)
Translates to: FVTHTSSVLTVLEQVLRSDFSLD*LLPQPG
Trigger: CCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAATC...GCTGCGGAGGACTTGTTCCAGCACAGTCAAGACTGATGATGTGTGTGTCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp CTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTGCATTACTCCCAGGGTTaGAAAAGCAAACACACACAG +
Preference number: 5 (lower is better)
Translates to: LLLLLEAGSSLADTFCFLHYSQG*KSKHTQ
Trigger: CTGTGTGTGTTTGCTTTTCAAACCCTGGGAGTAATG...CAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTGCTGCTTTTACTGCTaGAAGCTGGCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSCCFYC*KLARPW
Trigger: CCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AGCTTCCAGTTGTGGGTGCTTGTGCAGTTCCCCATCATAGTTCACCTGCCCTCCCTGTACTATTCTGTCTaGATTCCTGTTGCTATTCTA +
Preference number: 5 (lower is better)
Translates to: SFQLWVLVQFPIIVHLPSLYYSV*IPVAIL
Trigger: TAGAATAGCAACAGGAATCAAGACAGAATAGTACAG...GGAGGGCAGGTGAACTATGATGGGGAACTGCACAAGCACCCACAACTGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503707.6
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCAAATCAGCTTCCAGTaGTGGGTGCTTGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSQISFQ*WVLVQF
Trigger: GAACTGCACAAGCACCCACAACTGGAAGCTGATTTG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATCAAATCAGCTTCCAGTaGTGGGTGCTTGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHQISFQ*WVLVQF
Trigger: GAACTGCACAAGCACCCACAACTGGAAGCTGATTTG...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSSLCV*EIPSCS
Trigger: TGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCTCTGACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTTGTGCGATTTATATGGGGCTTCAAGTTaGTGTTGTGCTCACATCGTG +
Preference number: 5 (lower is better)
Translates to: SSDLTAAGQGRFKSLCDLYGASS*CCAHIV
Trigger: CACGATGTGAGCACAACACAAACTTGAAGCCCCATA...TAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTTCAGCAAACTCAATaGTCTGCACCAGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVQQTQ*SAPGSH
Trigger: GTGGCTTCCTGGTGCAGACAATTGAGTTTGCTGAAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCCACCTGAGCTCCAGTaGCTATTTCATCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSPPELQ*LFHQQL
Trigger: AAGCTGCTGATGAAATAGCAACTGGAGCTCAGGTGG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000515166.5
CDS TCA 90 bp AAAAGTCATACTCATCTTTTGTCCTCACATCCCTGGAGCAAGCTCTaGATTCCTGTAATGCCAGCTAGTAGAAGGCTGAGGCAGGAGAAT +
Preference number: 5 (lower is better)
Translates to: KSHTHLLSSHPWSKL*IPVMPASRRLRQEN
Trigger: ATTCTCCTGCCTCAGCCTTCTACTAGCTGGCATTACAGGAATTCAGAGCTTGCTCCAGGGATGTGAGGACAAAAGATGAGTATGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513738.5
CDS-3UTR CAA 90 bp CTGCTTTTACTGCTTGAAGCTGGCTCGTCCTTGGCTGACACCTTCTGTTTCTTGAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: LLLLLEAGSSLADTFCFLNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...CAAGAAACAGAAGGTGTCAGCCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCACACATCATCAGTCTaGACTGTGCTGGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSHTSSV*TVLEQV
Trigger: GACTTGTTCCAGCACAGTCAAGACTGATGATGTGTG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGGCTTCAAGTTTGTGTaGTGCTCACATCGTGGATCT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSGFKFV*CSHRGS
Trigger: AGATCCACGATGTGAGCACAACACAAACTTGAAGCC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTATGGGGCTTCAAGTTaGTGTTGTGCTCACATCGTG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSYGASS*CCAHIV
Trigger: CACGATGTGAGCACAACACAAACTTGAAGCCCCATA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTGAAAAGCTCAGTTTaGGATGACTTGGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLKSSV*DDLGAL
Trigger: CAGTGCCCCCAAGTCATCCAAAACTGAGCTTTTCAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCCACTTCCATACATaGCACCATGGAGCTGCAATC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFHFHT*HHGAAI
Trigger: GATTGCAGCTCCATGGTGCAATGTATGGAAGTGGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTATGCTGCTTTTACTGCTaGAAGCTGGCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLCCFYC*KLARPW
Trigger: CCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTGCTGCTTTTACTGCTaGAAGCTGGCTCGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWCCFYC*KLARPW
Trigger: CCAAGGACGAGCCAGCTTCAAGCAGTAAAAGCAGCA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCAGACATGGTCAGTATaGGGGACAACCCATATCTCT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSQTWSV*GTTHIS
Trigger: AGAGATATGGGTTGTCCCCAATACTGACCATGTCTG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCATTTGCATCTCCCACTaGGCCGTCTTCATAGACGAA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSICISH*AVFIDE
Trigger: TTCGTCTATGAAGACGGCCAAGTGGGAGATGCAAAT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp CTGCTTAACAGTTTATGGGGCTTCAAGTTTGTGTTGTGCTCACATCGTGGATCTATTTGCATCTCCCACTaGGCCGTCTTCATAGACGAA +
Preference number: 5 (lower is better)
Translates to: LLNSLWGFKFVLCSHRGSICISH*AVFIDE
Trigger: TTCGTCTATGAAGACGGCCAAGTGGGAGATGCAAAT...AGATCCACGATGTGAGCACAACACAAACTTGAAGCCCCATAAACTGTTAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TTAGAAGCAACAACCAGACCATTCCTCAGGATGGAGTGCCAGTTTTCAATGTGTGTTCAAAATCCAGCTTaGAACCCGAGGAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LEATTRPFLRMECQFSMCVQNPA*NPRKAF
Trigger: GAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAAC...ACACATTGAAAACTGGCACTCCATCCTGAGGAATGGTCTGGTTGTTGCTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp CCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCAACGGAACCAGGATCTaGAAGCAATATCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: PSESSSTVLFCLDSSPFSNGTRI*KQYLHH
Trigger: GTGGTGGAGATATTGCTTCAAGATCCTGGTTCCGTT...GGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCAAATCAGCTTCCAGTaGTGGGTGCTTGTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWQISFQ*WVLVQF
Trigger: GAACTGCACAAGCACCCACAACTGGAAGCTGATTTG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGATTTCAGTTTGGATTaGCTTTTGCCACAACCAGGG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSDFSLD*LLPQPG
Trigger: CCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAATC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWSSLCV*EIPSCS
Trigger: TGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHSSLCV*EIPSCS
Trigger: TGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCT...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TTGTGTTGTGCTCACATCGTGGATCTCCAGAACAAGATCGAGTCAATAGTCTATTTGAAAAGCTCAGTTTaGGATGACTTGGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: LCCAHIVDLQNKIESIVYLKSSV*DDLGAL
Trigger: CAGTGCCCCCAAGTCATCCAAAACTGAGCTTTTCAA...ATAGACTATTGACTCGATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCTCTGACTTAACAGCTGCAGGGCAAGGACGGTTCAAAAGTTTGTGCGATTTATCTGCGTTAGGTTCCTaGAAAAGCTCAGTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SSDLTAAGQGRFKSLCDLSALGS*KSSVLD
Trigger: ATCCAAAACTGAGCTTTTCAAGGAACCTAACGCAGA...TAAATCGCACAAACTTTTGAACCGTCCTTGCCCTGCAGCTGTTAAGTCAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTACTGGAATGCATTTaGCACCATTTGGAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVLECI*HHLEQA
Trigger: AGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGTTCAGCAAACTCAATaGTCTGCACCAGGAAGCCAC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWVQQTQ*SAPGSH
Trigger: GTGGCTTCCTGGTGCAGACAATTGAGTTTGCTGAAC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TACATTGCACCATGGAGCTGCAATCGTGTATTAGAAGCAACAACCAGACCATTCAAGCATAGGGCCATTTaGAAACACATGTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: YIAPWSCNRVLEATTRPFKHRAI*KHMWLI
Trigger: GATGAGCCACATGTGTTTCAAAATGGCCCTATGCTT...GAATGGTCTGGTTGTTGCTTCTAATACACGATTGCAGCTCCATGGTGCAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCATTACTCCCAGGGTTaGAAAAGCAAACACACACAG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSHYSQG*KSKHTQ
Trigger: CTGTGTGTGTTTGCTTTTCAAACCCTGGGAGTAATG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCCTAAAATTGGATTCTTaGGCTGGTGGACTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLKLDS*AGGLLR
Trigger: TCTCAGCAGTCCACCAGCCAAAGAATCCAATTTTAG...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCTCCATGTTTGTGCAGGTCAGATGAGGTGATCACTTCACATAAGGCTATGCATCTAAAATTGGATTCTTaGGCTGGTGGACTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: SPCLCRSDEVITSHKAMHLKLDS*AGGLLR
Trigger: TCTCAGCAGTCCACCAGCCAAAGAATCCAATTTTAG...ATGCATAGCCTTATGTGAAGTGATCACCTCATCTGACCTGCACAAACATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp CTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCTAACGGAACCAGGATCTaGAAGCAATATCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: LQNLPPLYYSVLIPPHFPNGTRI*KQYLHH
Trigger: GTGGTGGAGATATTGCTTCAAGATCCTGGTTCCGTT...AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
CDS-3UTR CAA 90 bp CATTGTCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCTGTACTATTCTGTCTaGATTCCTCCCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: HCHLQNLPPLYYSVLIPPLYYSV*IPPHFP
Trigger: AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAG...GGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSGRFKS*CDLIAV
Trigger: GACAGCAATTAAATCGCACAAACTTTTGAACCGTCC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp GGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATGGATGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GSKITTFLGDSNADLHMDGRFKS*CDLIAV
Trigger: GACAGCAATTAAATCGCACAAACTTTTGAACCGTCC...ATCCATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGGCTTCAAGTTTGTGTaGTGCTCACATCGTGGATCT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWGFKFV*CSHRGS
Trigger: AGATCCACGATGTGAGCACAACACAAACTTGAAGCC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTATGGGGCTTCAAGTTaGTGTTGTGCTCACATCGTG +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWYGASS*CCAHIV
Trigger: CACGATGTGAGCACAACACAAACTTGAAGCCCCATA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTGAAAAGCTCAGTTTaGGATGACTTGGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLKSSV*DDLGAL
Trigger: CAGTGCCCCCAAGTCATCCAAAACTGAGCTTTTCAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTCTGCGTTAGGTTCCTaGAAAAGCTCAGTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSSALGS*KSSVLD
Trigger: ATCCAAAACTGAGCTTTTCAAGGAACCTAACGCAGA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAGTTATGCTATCCAGTGCTTTCATTACTCGATCATAGTTCTTTTTCCTGGGGTCCACCTGAGCTCCAGTaGCTATTTCATCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: KLCYPVLSLLDHSSFSWGPPELQ*LFHQQL
Trigger: AAGCTGCTGATGAAATAGCAACTGGAGCTCAGGTGG...ACCCCAGGAAAAAGAACTATGATCGAGTAATGAAAGCACTGGATAGCATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCAGACATGGTCAGTATaGGGGACAACCCATATCTCT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWQTWSV*GTTHIS
Trigger: AGAGATATGGGTTGTCCCCAATACTGACCATGTCTG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGATTTGCATCTCCCACTaGGCCGTCTTCATAGACGAA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWICISH*AVFIDE
Trigger: TTCGTCTATGAAGACGGCCAAGTGGGAGATGCAAAT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGTTCAAAATCCAGCTTaGAACCCGAGGAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWVQNPA*NPRKAF
Trigger: GAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAAC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTTTCTGAGCTCCAGTaGCTATTTCATCAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFSELQ*LFHQQL
Trigger: AAGCTGCTGATGAAATAGCAACTGGAGCTCAGAAAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514067.6
CDS-3UTR CAA 90 bp CCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCATTTCAGCAATCCTTTaGAGATCCACAGGAAACGGA +
Preference number: 5 (lower is better)
Translates to: PSESSSTVLFCLDSSPFSISAIL*RSTGNG
Trigger: TCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAAT...GGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503888.5
ENST00000510303.6
CDS GCA 90 bp TCCCAAGCCACAGCAATCTCCTCATCAAGAAAGCTAACATCGATATaGAGATCAATATCTACATCATCAATGGCTCCATATTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SQATAISSSRKLTSI*RSISTSSMAPYSLR
Trigger: TCTCAGGGAATATGGAGCCATTGATGATGTAGATATTGATCTGCATATCGATGTTAGCTTTCTTGATGAGGAGATTGCTGTGGCTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281631.10
ENST00000503561.7
ENST00000505554.5
ENST00000505697.6
ENST00000511363.6
ENST00000514067.6
ENST00000514342.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGATTTCAGTTTGGATTaGCTTTTGCCACAACCAGGG +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWDFSLD*LLPQPG
Trigger: CCCTGGTTGTGGCAAAAGCAAATCCAAACTGAAATC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAAGCAGCTTATGCGTTTaGGAGATTCCGTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKSSLCV*EIPSCS
Trigger: TGAGCAGGACGGAATCTCCAAAACGCATAAGCTGCT...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTCACACATCATCAGTCTaGACTGTGCTGGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFHTSSV*TVLEQV
Trigger: GACTTGTTCCAGCACAGTCAAGACTGATGATGTGTG...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGTACTGGAATGCATTTaGCACCATTTGGAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWVLECI*HHLEQA
Trigger: AGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTAC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAAGCATAGGGCCATTTaGAAACACATGTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWKHRAI*KHMWLI
Trigger: GATGAGCCACATGTGTTTCAAAATGGCCCTATGCTT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTACATTACTCCCAGGGTTaGAAAAGCAAACACACACAG +
Preference number: 5 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLHYSQG*KSKHTQ
Trigger: CTGTGTGTGTTTGCTTTTCAAACCCTGGGAGTAATG...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTCCAGATATGGTGCTaGTGTCATTTCTCTGATAGA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSFQIWC*CHFSDR
Trigger: TCTATCAGAGAAATGACACAAGCACCATATCTGGAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTAAAATTGGATTCTTaGGCTGGTGGACTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLKLDS*AGGLLR
Trigger: TCTCAGCAGTCCACCAGCCAAAGAATCCAATTTTAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AAGGAACTGATGTGGAGTATGCATAAACTTCAATTGCCTGTTAACTGGCAGTTTCAGACATGGTCAGTATaGGGGACAACCCATATCTCT +
Preference number: 5 (lower is better)
Translates to: KELMWSMHKLQLPVNWQFQTWSV*GTTHIS
Trigger: AGAGATATGGGTTGTCCCCAATACTGACCATGTCTG...AAACTGCCAGTTAACAGGCAATTGAAGTTTATGCATACTCCACATCAGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCTTAACCAGTAGCAGTTaGATTACCAATTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSLTSSS*ITNYSE
Trigger: CTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAA...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGCTAAGCCATCTTTCTaGTCAAAACATACGTGTGAA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSAKPSF*SKHTCE
Trigger: TTCACACGTATGTTTTGACAAGAAAGATGGCTTAGC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGGCCTTACTGATCTCTaGGCAGTATTTACATTATGT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSGLTDL*AVFTLC
Trigger: ACATAATGTAAATACTGCCAAGAGATCAGTAAGGCC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp CAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCTTTTCTGTACTATTCTGTCTaGATTCCTCCCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: QNLPPLYYSVLIPPHFPFLYYSV*IPPHFP
Trigger: AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAG...AAAAGGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCTGTACTATTCTGTCTaGATTCCTCCCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWLYYSV*IPPHFP
Trigger: AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TCACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: SPSESSSTVLFCLDSSPFNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...AAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR CAA 90 bp CACCTTCAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: HLQNLPPLYYSVLIPPHFNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...AAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCATCCAAATCGCTCTTTaGTGGAAATCTGAAAGACAT +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSIQIAL*WKSERH
Trigger: ATGTCTTTCAGATTTCCACAAAAGAGCGATTTGGAT...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCACACACATCATCAGTCTaGACTGTGCTGGAACAAGTC +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEAHTSSV*TVLEQV
Trigger: GACTTGTTCCAGCACAGTCAAGACTGATGATGTGTG...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWGRFKS*CDLIAV
Trigger: GACAGCAATTAAATCGCACAAACTTTTGAACCGTCC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTATCTGCGTTAGGTTCCTaGAAAAGCTCAGTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLSALGS*KSSVLD
Trigger: ATCCAAAACTGAGCTTTTCAAGGAACCTAACGCAGA...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TTGTGTTGTGCTCACATCGTGGATCTCCAGAACAAGATCGAGTCAATAGTCTATTTCCAGATATGGTGCTaGTGTCATTTCTCTGATAGA +
Preference number: 5 (lower is better)
Translates to: LCCAHIVDLQNKIESIVYFQIWC*CHFSDR
Trigger: TCTATCAGAGAAATGACACAAGCACCATATCTGGAA...ATAGACTATTGACTCGATCTTGTTCTGGAGATCCACGATGTGAGCACAACACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTTTCCACTTCCATACATaGCACCATGGAGCTGCAATC +
Preference number: 5 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIFHFHT*HHGAAI
Trigger: GATTGCAGCTCCATGGTGCAATGTATGGAAGTGGAA...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp CCTCAGATAGGTGAACCTACTGTTATTCTTAAGTCAACAGGAACAGTTTGTATTCAGACATGGTCAGTATaGGGGACAACCCATATCTCT +
Preference number: 5 (lower is better)
Translates to: PQIGEPTVILKSTGTVCIQTWSV*GTTHIS
Trigger: AGAGATATGGGTTGTCCCCAATACTGACCATGTCTG...AATACAAACTGTTCCTGTTGACTTAAGAATAACAGTAGGTTCACCTATCTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTGAATGCCTCCTTCTaGTGTATTAATATTTGCATC +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVNASF*CINICI
Trigger: GATGCAAATATTAATACACAAGAAGGAGGCATTCAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGTTCAAAATCCAGCTTaGAACCCGAGGAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKVQNPA*NPRKAF
Trigger: GAAAGCCTTCCTCGGGTTCAAAGCTGGATTTTGAAC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTCCGTAATGGACATAAAATaGGCCCACGTAGAAAATCAA +
Preference number: 5 (lower is better)
Translates to: SSFEPEEGFRIMLIKWWSVMDIK*AHVENQ
Trigger: TTGATTTTCTACGTGGGCCAATTTTATGTCCATTAC...GGACCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp CAGAATCTTCCTCCACTGTACTATTCTGTCTTGATTCCTCCCCATTTTCCTTTTAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: QNLPPLYYSVLIPPHFPFNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...AAAAGGAAAATGGGGAGGAATCAAGACAGAATAGTACAGTGGAGGAAGATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503193.5
ENST00000503888.5
ENST00000507812.5
ENST00000510303.6
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWNSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGTACTGGAATGCATTTaGCACCATTTGGAGCAAGCT +
Preference number: 5 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKVLECI*HHLEQA
Trigger: AGCTTGCTCCAAATGGTGCAAAATGCATTCCAGTAC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAAGCATAGGGCCATTTaGAAACACATGTGGCTCATC +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLKHRAI*KHMWLI
Trigger: GATGAGCCACATGTGTTTCAAAATGGCCCTATGCTT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGTTCCAGATATGGTGCTaGTGTCATTTCTCTGATAGA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWFQIWC*CHFSDR
Trigger: TCTATCAGAGAAATGACACAAGCACCATATCTGGAA...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTACTAAAATTGGATTCTTaGGCTGGTGGACTGCTGAGA +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLLKLDS*AGGLLR
Trigger: TCTCAGCAGTCCACCAGCCAAAGAATCCAATTTTAG...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATTTAACCAGTAGCAGTTaGATTACCAATTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHLTSSS*ITNYSE
Trigger: CTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAA...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGCTAAGCCATCTTTCTaGTCAAAACATACGTGTGAA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWAKPSF*SKHTCE
Trigger: TTCACACGTATGTTTTGACAAGAAAGATGGCTTAGC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGCCCGTCTCCCAAATCTaGATATTAGATCTTCATGTT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWPVSQI*ILDLHV
Trigger: AACATGAAGATCTAATATCAAGATTTGGGAGACGGG...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGGACCTGCTTGGATTTaGGAAGCACATTTATATGTT +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWGPAWI*EAHLYV
Trigger: AACATATAAATGTGCTTCCAAAATCCAAGCAGGTCC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AATGGATTAGGTCAGTGGATTTTGAATTATGCTGGAGGCACTCTACAGAGCTTAGTGTTAACCCTGACATaGTTACCAGTGACTGAAATA +
Preference number: 5 (lower is better)
Translates to: NGLGQWILNYAGGTLQSLVLTLT*LPVTEI
Trigger: TATTTCAGTCACTGGTAACAATGTCAGGGTTAACAC...TAAGCTCTGTAGAGTGCCTCCAGCATAATTCAAAATCCACTGACCTAATCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGACATTCGCTACAATGTaGGAACTATTACAAAGCTGG +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWTFATM*ELLQSW
Trigger: CCAGCTTTGTAATAGTTCCAACATTGTAGCGAATGT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp GACACATATGTATTATCCATTTCAGCAATCCTTTTGAGATCCACAGGAAACGGAATTTCAGCAATCCTTTaGAGATCCACAGGAAACGGA +
Preference number: 5 (lower is better)
Translates to: DTYVLSISAILLRSTGNGISAIL*RSTGNG
Trigger: TCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAAT...TCCGTTTCCTGTGGATCTCAAAAGGATTGCTGAAATGGATAATACATATGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503888.5
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCACTGTACTATTCTGTCTaGATTCCTCCCCATTTTCCT +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEALYYSV*IPPHFP
Trigger: AGGAAAATGGGGAGGAATCAAGACAGAATAGTACAG...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAGGACGGTTCAAAAGTTaGTGCGATTTAATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLGRFKS*CDLIAV
Trigger: GACAGCAATTAAATCGCACAAACTTTTGAACCGTCC...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGGTGAATGCCTCCTTCTaGTGTATTAATATTTGCATC +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWVNASF*CINICI
Trigger: GATGCAAATATTAATACACAAGAAGGAGGCATTCAC...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281631.10
ENST00000505554.5
ENST00000514067.6
ENST00000515166.5
CDS-3UTR CAA 90 bp ATATGGCTCGAAAATCACAACTTTTCTAGGAGATTCCAACGCAGACCTACACATGTGAATGCCTCCTTCTaGTGTATTAATATTTGCATC +
Preference number: 5 (lower is better)
Translates to: IWLENHNFSRRFQRRPTHVNASF*CINICI
Trigger: GATGCAAATATTAATACACAAGAAGGAGGCATTCAC...ATGTGTAGGTCTGCGTTGGAATCTCCTAGAAAAGTTGTGATTTTCGAGCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515166.5
CDS-3UTR CAA 90 bp AAATCCAGCTTTGAACCCGAGGAAGGCTTTCGAATCATGTTAATTAAATGGTGGAAATCAGATAGAGCCTaGATTCAGGGTTTGAATAGA +
Preference number: 5 (lower is better)
Translates to: KSSFEPEEGFRIMLIKWWKSDRA*IQGLNR
Trigger: TCTATTCAAACCCTGAATCAAGGCTCTATCTGATTT...CCACCATTTAATTAACATGATTCGAAAGCCTTCCTCGGGTTCAAAGCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281631.10
ENST00000505554.5
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCATTAGGTCAGTGGATTTaGAATTATGCTGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEALGQWI*NYAGGT
Trigger: AGTGCCTCCAGCATAATTCAAAATCCACTGACCTAA...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAAATTCTTCGGAATCATaGTCACCTTCAGAATCTTCC +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEANSSES*SPSESS
Trigger: GGAAGATTCTGAAGGTGACAATGATTCCGAAGAATT...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCATTCCAGATATGGTGCTaGTGTCATTTCTCTGATAGA +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEAFQIWC*CHFSDR
Trigger: TCTATCAGAGAAATGACACAAGCACCATATCTGGAA...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTATTAACCAGTAGCAGTTaGATTACCAATTACTCGGAG +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLLTSSS*ITNYSE
Trigger: CTCCGAGTAATTGGTAATCAAACTGCTACTGGTTAA...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAATTGTATGGACCTGCTaGGATTTTGGAAGCACATTT +
Preference number: 5 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKIVWTC*DFGSTF
Trigger: AAATGTGCTTCCAAAATCCAAGCAGGTCCATACAAT...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp GATAACAGTGTTCAAATCTCTAAATTGTATGGACCTGCTTGGATTTTGGAAGCAATCCAAATCGCTCTTTaGTGGAAATCTGAAAGACAT +
Preference number: 5 (lower is better)
Translates to: DNSVQISKLYGPAWILEAIQIAL*WKSERH
Trigger: ATGTCTTTCAGATTTCCACAAAAGAGCGATTTGGAT...TGCTTCCAAAATCCAAGCAGGTCCATACAATTTAGAGATTTGAACACTGTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAAATCAGATAGAGCCTaGATTCAGGGTTTGAATAGA +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLKSDRA*IQGLNR
Trigger: TCTATTCAAACCCTGAATCAAGGCTCTATCTGATTT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp TGCCTTTGCTCAGTGGGTTACTATCTAAGTAGCAATGGCTACACAATTAATAAAGTCAACAGGAACAGTTaGTATTATGCCAATTTTCCT +
Preference number: 5 (lower is better)
Translates to: CLCSVGYYLSSNGYTINKVNRNS*YYANFP
Trigger: AGGAAAATTGGCATAATACAAACTGTTCCTGTTGAC...TTTATTAATTGTGTAGCCATTGCTACTTAGATAGTAACCCACTGAGCAAAGGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS-3UTR CAA 90 bp ATTCATTGGGTGTTAACCCTGACATTGTTACCAGTGACTGAAATATCCATGTTAAAGGTTCTGACGCAATaGTTTGAAACAAAATCTGTC +
Preference number: 5 (lower is better)
Translates to: IHWVLTLTLLPVTEISMLKVLTQ*FETKSV
Trigger: GACAGATTTTGTTTCAAACAATTGCGTCAGAACCTT...TAACATGGATATTTCAGTCACTGGTAACAATGTCAGGGTTAACACCCAATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281631.10
CDS CCA 72 bp GATGTGAATGAGGAAGCAGACAGCTCTGGTCTCTGCTaGTTAGCCTTCTCACACCCACTGGGAAGCCAGTCT +
Preference number: 6 (lower is better)
Translates to: DVNEEADSSGLC*LAFSHPLGSQS
Trigger: AGACTGGCTTCCCAGTGGGTGTGAGAAGGCTAACCAGCAGAGACCAGAGCTGTCTGCTTCCTCATTCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513738.5
CDS TCA 72 bp ACTCATCTTTTGTCCTCACATCCCTGGAGCAAGCTCTaGATTCCTGTAATGCCAGCTAGTAGAAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: THLLSSHPWSKL*IPVMPASRRLR
Trigger: CCTCAGCCTTCTACTAGCTGGCATTACAGGAATTCAGAGCTTGCTCCAGGGATGTGAGGACAAAAGATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513738.5
CDS CAA 72 bp TGGTCAGTATTGGGGACAACCCATATCTCTCCATGTTaGTGCAGGTCAGATGAGGTGATCACTGTTAAGTGG +
Preference number: 6 (lower is better)
Translates to: WSVLGTTHISPC*CRSDEVITVKW
Trigger: CCACTTAACAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503561.7
CDS CCA 72 bp TTTTCAGCTGATGTCCCAATCCAAATCGCTCTTTTGTaGAAATCTGAAAGACATCAACAGTGGGCACTGGGC +
Preference number: 6 (lower is better)
Translates to: FSADVPIQIALL*KSERHQQWALG
Trigger: GCCCAGTGCCCACTGTTGATGTCTTTCAGATTTCCACAAAAGAGCGATTTGGATTGGGACATCAGCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000281631.10
ENST00000503561.7
ENST00000505554.5
ENST00000505697.6
ENST00000511363.6
ENST00000514067.6
ENST00000514342.6
CDS GCA 72 bp TCAGTATTGGGGACAACCCATATCTCTCCATGTTTGTaGAGGTCAGATGAGGTGATCACTGTTAAGTGGAAA +
Preference number: 6 (lower is better)
Translates to: SVLGTTHISPCL*RSDEVITVKWK
Trigger: TTTCCACTTAACAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503561.7
CDS CAA 90 bp GTGCAGACATGGTCAGTATTGGGGACAACCCATATCTCTCCATGTTaGTGCAGGTCAGATGAGGTGATCACTGTTAAGTGGAAAATAAAA +
Preference number: 6 (lower is better)
Translates to: VQTWSVLGTTHISPC*CRSDEVITVKWKIK
Trigger: TTTTATTTTCCACTTAACAGTGATCACCTCATCTGACCTGCACAAACATGGAGAGATATGGGTTGTCCCCAATACTGACCATGTCTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503561.7
CDS GCA 72 bp ACAGCAATCTCCTCATCAAGAAAGCTAACATCGATATaGAGATCAATATCTACATCATCAATGGCTCCATAT +
Preference number: 6 (lower is better)
Translates to: TAISSSRKLTSI*RSISTSSMAPY
Trigger: ATATGGAGCCATTGATGATGTAGATATTGATCTGCATATCGATGTTAGCTTTCTTGATGAGGAGATTGCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000281631.10
ENST00000503561.7
ENST00000505554.5
ENST00000505697.6
ENST00000511363.6
ENST00000514067.6
ENST00000514342.6
ENST00000515166.5