RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000137817

Ensembl transcript IDs: ENST00000260376.11, ENST00000287196.13, ENST00000413097.6, ENST00000419739.7, ENST00000544520.5, ENST00000564610.5, ENST00000565443.5, ENST00000565999.5, ENST00000566831.5, ENST00000566844.1, ENST00000566991.5, ENST00000567042.1, ENST00000567263.5, ENST00000567440.5, ENST00000567633.1, ENST00000567974.5, ENST00000568213.1, ENST00000568360.5, ENST00000569173.5, ENST00000569795.6, ENST00000569890.1, ENST00000569972.5, ENST00000616176.4

Found 1044 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGCTGCCATAGAGCTTCTTGGCGGTCCGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGTGTGCA +
Preference number: 1 (lower is better)
Translates to: RCCHRASWRSGTEPP*QEGCSAGGTGVRCA
Trigger: TGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCAGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR CCA 90 bp CAATGTGGGACCCATGGAAGGCAAAGGTGCTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCA +
Preference number: 1 (lower is better)
Translates to: QCGTHGRQRCCHRAS*RSGTEPPWQEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATGGGTCCCACATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR CCA 90 bp CGGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAACTTCAGCTGCCTGCTGAGAGGTAGT +
Preference number: 1 (lower is better)
Translates to: RNRASLAGGLLSRRN*CEVCMNFSCLLRGS
Trigger: ACTACCTCTCAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR GCA 90 bp TTCCTGAGTATCCAAAGGAAATACTGGAGATGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTTGGTGTAGG +
Preference number: 1 (lower is better)
Translates to: FLSIQRKYWRWGSGR*LCHRLLHAAAVWCR
Trigger: CCTACACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGATACTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR GCA 90 bp CTTGTGCAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGATGTAATCACTTCACAAAGTGCTATA +
Preference number: 1 (lower is better)
Translates to: LVQTWSDTGHTQMFP*FWRSLDVITSQSAI
Trigger: TATAGCACTTTGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTGCACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR GCA 90 bp CCAGCTCGGAACTTCTTGATGGTACCACTTGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTCTTCAAGAAATCATTGCTCAGATGT +
Preference number: 1 (lower is better)
Translates to: PARNFLMVPLALNQL*LFSCWVFKKSLLRC
Trigger: ACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR GCA 90 bp TTCTTGATGGTACCACTTGCCTTGAACCAACTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCATTGCTCAGATGTTTCCATTGTTGG +
Preference number: 1 (lower is better)
Translates to: FLMVPLALNQLCLFS*WVFKKSLLRCFHCW
Trigger: CCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR CCA 90 bp TTGATGGTACCACTTGCCTTGAACCAACTGTGCCTCTTCTCCTGCTaGGTCTTCAAGAAATCATTGCTCAGATGTTTCCATTGTTGGGAT +
Preference number: 1 (lower is better)
Translates to: LMVPLALNQLCLFSC*VFKKSLLRCFHCWD
Trigger: ATCCCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR GCA 90 bp GGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGTATTCATGCAGAGATTaGAGACGAGGGGTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GTEPPWQEGCSAGGTGVRYSCRD*RRGVGK
Trigger: CTTCCCCACCCCTCGTCTGCAATCTCTGCATGAATA...CCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 2 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 2 (lower is better)
Translates to: AASAAVPEHFYEGRWILGGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp TCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 2 (lower is better)
Translates to: SLDQLILGGHPVLSFSHSSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...GGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR GCA 90 bp AGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTCCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 2 (lower is better)
Translates to: RWGSGRCLCHRLLHAAAVPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...AACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp ATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 2 (lower is better)
Translates to: ISGPAHPWRASCAVLFPFGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...GAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR TCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp GGAAGGCAAAGGTGCTGCCATAGAGCTTCTTGGCGGTCCGGAACCGAGCCTCCTAACTGGTGTGAGGTGTaGATGAACTTCAGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GRQRCCHRASWRSGTEPPNWCEV*MNFSCL
Trigger: CAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT...AGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 2 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: AASAAVPEHFYEGRWILGLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR TCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 2 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 2 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCACACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 2 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
3UTR-3UTR CCA 90 bp CCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCAAAATTGCAGACGAGGGGTaGGGAAGTCTGGTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: PIAQDRMPVLNVGPMEGKIADEG*GSLVRD
Trigger: GTCCCTCACCAGACTTCCCCACCCCTCGTCTGCAAT...TTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR TCA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 2 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 2 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp TGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: CIDQPIAQDRMPVLNVGPSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...GGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR CAA 90 bp GACTTGGGGATGGGTGAAAAGATGCTGAGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTGAACCAACTGTGCCTCTTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: DLGMGEKMLRPARNF*MVPLALNQLCLFSC
Trigger: GCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCATCCCCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR CAA 90 bp GAACGGTTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCCTGTATGATAGGGAAACTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: ERFMRRPTRSSGTPS*PFSMESCMIGKLGD
Trigger: GTCTCCCAGTTTCCCTATCATACAGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAACCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR TCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 2 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR GCA 90 bp TCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SLDQLILGGHPVLSFSHSHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...GGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR GCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
3UTR-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 2 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: AASAAVPEHFYEGRWILGWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR TCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR TCA 90 bp GCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAACAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 2 (lower is better)
Translates to: AHPWRASCAVLFPFLSIQQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...TTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR GCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR GCA 90 bp CTGTTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: LLYLWTSSSLEGILCCPFAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...AAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR-3UTR GCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCATCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 2 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR-3UTR CCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 2 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCATGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp AGGAAATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 2 (lower is better)
Translates to: RKYWRWGSGRCLCHRLLHLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...ATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp TGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 2 (lower is better)
Translates to: CIDQPIAQDRMPVLNVGPRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...GGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 2 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
3UTR-3UTR TCA 90 bp CTGTTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 2 (lower is better)
Translates to: LLYLWTSSSLEGILCCPFLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...AAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAACAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 2 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 2 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp TCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: SDTGHTQMFPCFWRSLDVTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...TACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 2 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR GCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 2 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR GCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 2 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR GCA 90 bp TTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCTGCATGAACTTCAGCTaGCTGCTGAGAGGTAGTTTG +
Preference number: 2 (lower is better)
Translates to: LYLWTSSSLEGILCCPFPCMNFS*LLRGSL
Trigger: CAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCA...GGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 2 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR CAA 90 bp AAGATGCTGAGGCCAGCTCGGAACTTCTTGATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTCTCCTGCTGGGTCTTCAAGAAATCA +
Preference number: 2 (lower is better)
Translates to: KMLRPARNFLMVPLA*NQLCLFSCWVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGGCCTCAGCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR TCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 2 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 2 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 2 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR TCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR TCA 90 bp TTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCAGCATGAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 2 (lower is better)
Translates to: FMRRPTRSSGTPSLPFSMRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...CATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 2 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 2 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 2 (lower is better)
Translates to: AASAAVPEHFYEGRWILGMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 2 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CCA 90 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 2 (lower is better)
Translates to: YLWTSSSLEGILCCPFPISKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...AATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 2 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR GCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 2 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp ACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 2 (lower is better)
Translates to: TSSSLEGILCCPFPIPEYMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...ATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
3UTR-3UTR TCA 90 bp CCAAATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCCTCCACTGTCTGCTaGTGGTCTAGGAAAGACAGA +
Preference number: 2 (lower is better)
Translates to: PNPSLFDGWKTSMDGSGPSSTVC*WSRKDR
Trigger: TCTGTCTTTCCTAGACCATCAGCAGACAGTGGAGGA...TGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: STMKATSYISFSCPLVMAMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR CAA 90 bp CCAGGATCTTTTTCAACTGAAGACCCAGCCCAAATCCTTCCTTATTaGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTAGGT +
Preference number: 2 (lower is better)
Translates to: PGSFSTEDPAQILPY*MAGKPQWMVLVHLG
Trigger: ACCTAGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 2 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR CAA 90 bp TTGAACCAACTGTGCCTCTTCTCCTGCTGGGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGTTGGGATGTAAACATACCCAGGATC +
Preference number: 2 (lower is better)
Translates to: LNQLCLFSCWVFKKS*LRCFHCWDVNIPRI
Trigger: GATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR TCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 2 (lower is better)
Translates to: HTHDFLLYLGVLSINVGICILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000616176.4
3UTR-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 2 (lower is better)
Translates to: SSTMKATSYISFSCPLVMSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR TCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260376.11
ENST00000616176.4
3UTR-3UTR GCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGTGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616176.4
3UTR CAA 90 bp CTTCTCCTGCTGGGTCTTCAAGAAATCATTGCTCAGATGTTTCCATaGTTGGGATGTAAACATACCCAGGATCTTTTTCAACTGAAGACC +
Preference number: 2 (lower is better)
Translates to: LLLLGLQEIIAQMFP*LGCKHTQDLFQLKT
Trigger: GGTCTTCAGTTGAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR-3UTR CCA 90 bp ATTGCTCAGATGTTTCCATTGTTGGGATGTAAACATACCCAGGATCTTTTTCAAGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 2 (lower is better)
Translates to: IAQMFPLLGCKHTQDLFQAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...TTGAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR CCA 72 bp CATAGAGCTTCTTGGCGGTCCGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTG +
Preference number: 3 (lower is better)
Translates to: HRASWRSGTEPP*QEGCSAGGTGV
Trigger: CACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAAGCTCTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR CCA 72 bp GCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAACTTCAGCTGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: ASLAGGLLSRRN*CEVCMNFSCLL
Trigger: CAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CAA 90 bp CCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCAAACGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: PIAQDRMPVLNVGPMEGKRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...TTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR TCA 72 bp CTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAGCTGCCTGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LGRRAAQQEELV*GVHELQLPAER
Trigger: CCTCTCAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR-3UTR CAA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 3 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CAA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 3 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR-3UTR CAA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 3 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR TCA 72 bp CTGCTCCAGTGGCCACCTCCTCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGGAGAAAACGCATAGTT +
Preference number: 3 (lower is better)
Translates to: LLQWPPPLQLQT*RPVCRRRKRIV
Trigger: AACTATGCGTTTTCTCCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CAA 90 bp ATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 3 (lower is better)
Translates to: ISGPAHPWRASCAVLFPFWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...GAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
3UTR TCA 72 bp CTGCTCCATGCAGCTGCAGTTTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGATCGAATGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: LLHAAAVWCRMH*PAHCAGSNASS
Trigger: AGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGCTGCATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
3UTR GCA 72 bp ATAGGCTGCTCCATGCAGCTGCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCGCAGGATCGAATGCCA +
Preference number: 3 (lower is better)
Translates to: IGCSMQLQFGVG*IDQPIAQDRMP
Trigger: TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGCTGCATGGAGCAGCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR CCA 72 bp AGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGC +
Preference number: 3 (lower is better)
Translates to: SQGMESVWAIRM*SSSWVKLYHEG
Trigger: GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR GCA 72 bp GCTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCGCAGGATCGAATGCCA +
Preference number: 3 (lower is better)
Translates to: AVLFPFLQFGVG*IDQPIAQDRMP
Trigger: TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
3UTR GCA 72 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGG +
Preference number: 3 (lower is better)
Translates to: YLWTSSSLEGIL*CPFPIPAVWCR
Trigger: CCTACACCAAACTGCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR GCA 72 bp AGGAAATACTGGAGATGGGGCTCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCAGCTGCAGTTTGGTGT +
Preference number: 3 (lower is better)
Translates to: RKYWRWGSGRCL*HRLLHAAAVWC
Trigger: ACACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR CCA 72 bp GACCTGTTGCTAGAGATGATCCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTGTCCATCTGTTTCTTG +
Preference number: 3 (lower is better)
Translates to: DLLLEMIHCRRG*ARGSNLSICFL
Trigger: CAAGAAACAGATGGACAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAGCAACAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
3UTR-3UTR CAA 90 bp CTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 3 (lower is better)
Translates to: LWTSSSLEGILCCPFPIPTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
3UTR TCA 72 bp CCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGATCGAATGCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: PFPIPAVWCRMH*PAHCAGSNASS
Trigger: AGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR GCA 72 bp ATCCAAAGGAAATACTGGAGATGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: IQRKYWRWGSGR*LCHRLLHAAAV
Trigger: AACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR TCA 72 bp ATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGGATGGTATTCATCCTG +
Preference number: 3 (lower is better)
Translates to: IQFRFRLCRNRD*MDRVWGMVFIL
Trigger: CAGGATGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR GCA 72 bp ACATGGTCGGACACAGGGCACACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGATGTAATCACTTCACAA +
Preference number: 3 (lower is better)
Translates to: TWSDTGHTQMFP*FWRSLDVITSQ
Trigger: TTGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR GCA 72 bp CCACCTGACCATCCTCATATACAAAGAAGAATCTTGTaGAGACATGGTCGGACACAGGGCACACCCAGATGT +
Preference number: 3 (lower is better)
Translates to: PPDHPHIQRRIL*RHGRTQGTPRC
Trigger: ACATCTGGGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
3UTR GCA 72 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAA +
Preference number: 3 (lower is better)
Translates to: YLWTSSSLEGIL*CPFPIPEYPKE
Trigger: TTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR-3UTR CAA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
3UTR-3UTR CAA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 3 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR CCA 72 bp CGAGTACAGACAGCTGGCTTCAGCATAGATCCATTTTaGAAGACATGCTGCTCATCACACACCACACAGTAC +
Preference number: 3 (lower is better)
Translates to: RVQTAGFSIDPF*KTCCSSHTTQY
Trigger: GTACTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGGATCTATGCTGAAGCCAGCTGTCTGTACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR CCA 72 bp GTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGG +
Preference number: 3 (lower is better)
Translates to: VLFPFLSIQRKY*RWGSGRCLCHR
Trigger: CCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
3UTR-3UTR CAA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR-3UTR CAA 90 bp TTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCAGCATGGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 3 (lower is better)
Translates to: FMRRPTRSSGTPSLPFSMVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...CATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR GCA 72 bp GTACCACTTGCCTTGAACCAACTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCATTGCTCAGATGTTTC +
Preference number: 3 (lower is better)
Translates to: VPLALNQLCLFS*WVFKKSLLRCF
Trigger: GAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR TCA 72 bp TTTCAACTGAAGACCCAGCCCAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAATGGATGGTTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: FQLKTQPKSFLI*WLENLNGWFWS
Trigger: GGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTGGGCTGGGTCTTCAGTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR GCA 72 bp AACTTCTTGATGGTACCACTTGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTCTTCAAGAAATCATTG +
Preference number: 3 (lower is better)
Translates to: NFLMVPLALNQL*LFSCWVFKKSL
Trigger: CAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR CCA 72 bp AAAACCTCAATGGATGGTTCTGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGCCTCAACACAATAGGT +
Preference number: 3 (lower is better)
Translates to: KTSMDGSGPSRY*ERENRSLNTIG
Trigger: ACCTATTGTGTTGAGGCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp GGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GTEPPWQEGCSAGGTGVRGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...CCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCGGGAGGCCCACGTGCTaGGGGCACAGGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGGRPTC*GHRRPA
Trigger: GGCAGGTCTCCTGTGCCCTCAGCACGTGGGCCTCCC...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGGGAGGCCCACGTGCTaGGGGCACAGGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWGRPTC*GHRRPA
Trigger: GGCAGGTCTCCTGTGCCCTCAGCACGTGGGCCTCCC...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCGGGAGGCCCACGTGCTaGGGGCACAGGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIGRPTC*GHRRPA
Trigger: GGCAGGTCTCCTGTGCCCTCAGCACGTGGGCCTCCC...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGGGAGGCCCACGTGCTaGGGGCACAGGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTGRPTC*GHRRPA
Trigger: GGCAGGTCTCCTGTGCCCTCAGCACGTGGGCCTCCC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GTEPPWQEGCSAGGTGVRGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...CCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCCCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTTGTTCGTCCACCCCTaGGGAGACGGGGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSLFVHP*GDGASP
Trigger: GGGGCTCGCCCCGTCTCCGCAGGGGTGGACGAACAA...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR CCA 90 bp CCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCAAAGGTCACCGCTCCATGTaGCTGCCCCACCCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PIAQDRMPVLNVGPMEGKGHRSM*LPHPWV
Trigger: GACCCAGGGGTGGGGCAGCCACATGGAGCGGTGACC...TTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGGGAGGCCCACGTGCTaGGGGCACAGGAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGGRPTC*GHRRPA
Trigger: GGCAGGTCTCCTGTGCCCTCAGCACGTGGGCCTCCC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RWGSGRCLCHRLLHAAAVGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...AACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTCCACACAGGCCAGCCTaGCGAGTACTCACGGCGACC +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLPHRPA*RVLTAT
Trigger: GGTCGCCGTGAGTACTCGCCAGGCTGGCCTGTGTGG...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTCTTGCAGTGACCACTaGCCTGGGGGCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLSCSDH*PGGWEG
Trigger: ACCCTCCCAGCCCCCAGGTCAGTGGTCACTGCAAGA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564610.5
ENST00000567974.5
CDS-3UTR GCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCCAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCCGACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCACAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDSAGTVTEWIGSGGWYSQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...TGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTCTTGCAGTGACCACTaGCTGGGGGCTGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKSCSDH*LGAGRV
Trigger: TACCCTCCCAGCCCCCAGGCAGTGGTCACTGCAAGA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569173.5
CDS-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGACCTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKDLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGGTC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCGACCTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLDLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGGTC...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: GTEPPWQEGCSAGGTGVRRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...CCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGCCACTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWPLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGTGG...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569173.5
CDS-3UTR CCA 90 bp AGCCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCATGGCTGCCCCACCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: SPLRRIECQFSMWDPWKAWLPHP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGGTGGGGCAGCCA...TGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCGACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCAGTCAGGGACAACTGGTaGTCTGTTGGGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: SDSAGTVTEWIGSGGWYSVRDNW*SVGDGR
Trigger: CCTGCCATCCCCAACAGATCACCAGTTGTCCCTGAC...TGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTCGATACAGGTCAGCTaGACAGCTCCCCTGAACGCC +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKSIQVS*TAPLNA
Trigger: GGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCATCGATACAGGTCAGCTaGACAGCTCCCCTGAACGCC +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSSIQVS*TAPLNA
Trigger: GGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGA...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWISGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGCAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTACAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTACCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCGGGGATGGCAGGCTCTaGTGTTGCGGTGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLGDGRL*CCGGNK
Trigger: CTTGTTACCACCGCAACAGCAGAGCCTGCCATCCCC...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGACCTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWDLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGGTC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp TCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SLDQLILGGHPVLSFSHSCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...GGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTACCACTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: SDTGHTQMFPCFWRSLDVPLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGTGG...TACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR TCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LYLWTSSSLEGILCCPFPRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...GGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCAAAGGTGCTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: CAGSNASSQCGTHGRQRCWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...GCACCTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCATTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCGTCAGGGACAACTGGTaGTCTGTTGGGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSVRDNW*SVGDGR
Trigger: CCTGCCATCCCCAACAGATCACCAGTTGTCCCTGAC...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR TCA 90 bp TCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAGTCAGGGACAACTGGTaGTCTGTTGGGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: SDTGHTQMFPCFWRSLDVVRDNW*SVGDGR
Trigger: CCTGCCATCCCCAACAGATCACCAGTTGTCCCTGAC...TACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567440.5
CDS-3UTR TCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGTCAGGGACAACTGGTaGTCTGTTGGGGATGGCAGG +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGVRDNW*SVGDGR
Trigger: CCTGCCATCCCCAACAGATCACCAGTTGTCCCTGAC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR TCA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGGAATGTTCTTGCAGTaGCCACTGCCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQGMFLQ*PLPGGW
Trigger: CCAGCCCCCAGGCAGTGGTCACTGCAAGAACATTCC...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp TTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCAGCATGTCGATACAGGTCAGCTaGACAGCTCCCCTGAACGCC +
Preference number: 4 (lower is better)
Translates to: FMRRPTRSSGTPSLPFSMSIQVS*TAPLNA
Trigger: GGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGA...CATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR GCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGGCAGGCTCTGCTGTTaGGGTGGTAACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKGRLCC*GGNKSL
Trigger: CAGTGACTTGTTACCACCGCAACAGCAGAGCCTGCC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR GCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCGGGGATGGCAGGCTCTaGTGTTGCGGTGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIGDGRL*CCGGNK
Trigger: CTTGTTACCACCGCAACAGCAGAGCCTGCCATCCCC...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACGACCTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNDLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGGTC...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGACACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: PFLQFGVGCIDQPIAQDRHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...TCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR CCA 90 bp AATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: NTGDGAQVDAFAIGCSMQHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...CTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTATGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: VSLDQLILGGHPVLSFSHRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...ATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCATCCCAACTGGTGATCTGTTaGGGATGGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSAGTVTEWIGSGGWYSSQLVIC*GWQALL
Trigger: CAGCAGAGCCTGCCATCCCCAACAGATCACCAGTTG...GGATGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTGCCAGTTCTCAATGTaGGACCCACCTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWCQFSM*DPPAER
Trigger: CCTCTCAGCAGGTGGGTCCCACATTGAGAACTGGCA...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGGCCCTGTGCCCGTGGTaGCGGCCACACAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQALCPW*RPHRPA
Trigger: GGCTGGCCTGTGTGGCCGCCACCACGGGCACAGGGC...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR CCA 90 bp ATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCATTGCAGACGAGGGGTaGGGAAGTCTGGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: ISGPAHPWRASCAVLFPFIADEG*GSLVRD
Trigger: GTCCCTCACCAGACTTCCCCACCCCTCGTCTGCAAT...GAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR TCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR TCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTATGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMACRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGAATGTTCTTGCAGTaGCCACTGACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADGMFLQ*PLTWGL
Trigger: CAGCCCCCAGGTCAGTGGTCACTGCAAGAACATTCC...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564610.5
ENST00000567974.5
CDS-3UTR GCA 90 bp TTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATTCGATACAGGTCAGCTaGACAGCTCCCCTGAACGCC +
Preference number: 4 (lower is better)
Translates to: FPFLQFGVGCIDQPIAQDSIQVS*TAPLNA
Trigger: GGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGA...ATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGGATGGCAGGCTCTaGTGTTGCGGTGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADGDGRL*CCGGNK
Trigger: CTTGTTACCACCGCAACAGCAGAGCCTGCCATCCCC...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR GCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCATGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCTGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGAGTGGGAATGTTCTTaGAGTGACCACTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTEWECS*SDHCLG
Trigger: CCCCAGGCAGTGGTCACTGCAAGAACATTCCCACTC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569173.5
CDS-3UTR GCA 90 bp GGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTTGGTTATTCATGCAGAGATTaGAGACGAGGGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAQVDAFAIGCSMQLQFGYSCRD*RRGVGK
Trigger: CTTCCCCACCCCTCGTCTGCAATCTCTGCATGAATA...ACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGCACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCATGGAAGGCAAAGGTGCCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: CAGSNASSQCGTHGRQRCLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...GCACCTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCATCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCAACTGGTGATCTGTTaGGGATGGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSQLVIC*GWQALL
Trigger: CAGCAGAGCCTGCCATCCCCAACAGATCACCAGTTG...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
3UTR CAA 72 bp AGGCCAGCTCGGAACTTCTTGATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTCTCCTGCTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RPARNFLMVPLA*NQLCLFSCWVF
Trigger: GAAGACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp CAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTTGGTGTAGGATCCAGAACTGGCCTTTaGTGTCCATTGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QVDAFAIGCSMQLQFGVGSRTGL*CPLGQW
Trigger: CCACTGACCCAATGGACATCAAAGGCCAGTTCTGGA...TCCTACACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GCTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: AVLFPFLQFGVGCIDQPILQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...AATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: NTGDGAQVDAFAIGCSMQQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...CTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp TTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLQFGVGCIDQPIAQDRMWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...CATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR TCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPFLQFGVGCIDQPIAQDWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...ATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR TCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: EGILCCPFPIPEYPKEILSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAACTGGTGTGAGGTGTaGATGAACTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWNWCEV*MNFSLL
Trigger: CAGCAGGCTGAAGTTCATGCACACCTCACACCAGTT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp TGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CIDQPIAQDRMPVLNVGPLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...GGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
CDS-3UTR GCA 90 bp GACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCATCCCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: DSAGTVTEWIGSGGWYSSQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...GGATGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACGGCAGGCTCTGCTGTTaGGGTGGTAACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYGRLCC*GGNKSL
Trigger: CAGTGACTTGTTACCACCGCAACAGCAGAGCCTGCC...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR GCA 90 bp TCCATGCAGCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: SMQLQFGVGCIDQPIAQDAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...ATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGCTGCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTTGGTTGCATGAACTTCAGCTaGCTGCTGAGAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: GAQVDAFAIGCSMQLQFGCMNFS*LLRGSL
Trigger: CAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCA...ACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACATCTTGCAGTGACCACTaGCTGGGGGCTGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTSCSDH*LGAGRV
Trigger: TACCCTCCCAGCCCCCAGGCAGTGGTCACTGCAAGA...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGAGTGGGAATGTTCTTaGAGTGACCACTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQEWECS*SDHCLG
Trigger: CCCCAGGCAGTGGTCACTGCAAGAACATTCCCACTC...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp GACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCATCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCA +
Preference number: 4 (lower is better)
Translates to: DSAGTVTEWIGSGGWYSSLEGIL*CPFPIP
Trigger: TGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GGATGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567263.5
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMARADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLFPFLQFGVGCIDQPIAGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...CGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCAACTGGTGATCTGTTaGGGATGGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYQLVIC*GWQALL
Trigger: CAGCAGAGCCTGCCATCCCCAACAGATCACCAGTTG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CCA 90 bp TTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGTGCCAGTTCTCAATGTaGGACCCACCTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: FLQFGVGCIDQPIAQDRMCQFSM*DPPAER
Trigger: CCTCTCAGCAGGTGGGTCCCACATTGAGAACTGGCA...CATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR TCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCGGAATGTTCTTGCAGTaGCCACTGACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIGMFLQ*PLTKGE
Trigger: CTCTCCTTTGGTCAGTGGTCACTGCAAGAACATTCC...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR TCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTATTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: SDTGHTQMFPCFWRSLDVLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...TACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMALVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCATTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACTGAGATCCAGAATGTaGAGATCTTGGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSLRSRM*RSWGEV
Trigger: AACCTCACCCCAAGATCTTCACATTCTGGATCTCAG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287196.13
ENST00000567440.5
ENST00000569795.6
CDS-3UTR TCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACAGGAATGTTCTTGCAGTaGCCACTGACCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTGMFLQ*PLTWGL
Trigger: CAGCCCCCAGGTCAGTGGTCACTGCAAGAACATTCC...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564610.5
CDS-3UTR TCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCACTTGATTTCCAAATATaGGCCCTCTGCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPLDFQI*ALCSSG
Trigger: GCCACTGGAGCAGAGGGCTCATATTTGGAAATCAAG...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569890.1
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAACGGTTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: MERFMRRPTRSSGTPSLPLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...AGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAACCGTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCAGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCCGACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCACTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SDSAGTVTEWIGSGGWYSLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...TGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATGGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: HKVLYSLDSDSAGTVTEWSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp AACTGGTGTGAGGTGTGCATGAACTTCAGCTGCCTGCTGAGAGGTAGTTTGACACTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NWCEVCMNFSCLLRGSLTLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...TGTCAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp GCTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AVLFPFLQFGVGCIDQPILEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...AATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR GCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMALEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCAACTGGTGTGAGGTGTaGATGAACTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWINWCEV*MNFSLL
Trigger: CAGCAGGCTGAAGTTCATGCACACCTCACACCAGTT...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCAGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR GCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGATTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PFLQFGVGCIDQPIAQDRLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...TCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR GCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCACAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567042.1
ENST00000567440.5
ENST00000569890.1
ENST00000616176.4
CDS-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: NTGDGAQVDAFAIGCSMQLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...CTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTATCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGTTTGGTGTAGGAAACTGGTGTGAGGTGTaGATGAACTTCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QVDAFAIGCSMQLQFGVGNWCEV*MNFSCL
Trigger: CAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT...TCCTACACCAAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTAACTGGTGTGAGGTGTaGATGAACTTCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLNWCEV*MNFSCL
Trigger: CAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567974.5
CDS-3UTR GCA 90 bp GGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGATGAATGTCTATTCATaGAGAGATTGCAGACGAGGG +
Preference number: 4 (lower is better)
Translates to: GDGAQVDAFAIGCSMQLQMNVYS*RDCRRG
Trigger: CCCTCGTCTGCAATCTCTGCATGAATAGACATTCAT...CTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTTGTCCATTGGGTCAGTaGGTCACACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVCPLGQ*VTHTLR
Trigger: CCTGAGAGTGTGTGTGACCCACTGACCCAATGGACA...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCGCCTTTGATGTCCATTaGGTCAGTGGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLAFDVH*VSGSHT
Trigger: TGTGTGTGACCCACTGACCCAATGGACATCAAAGGC...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCAACACAATAGGTTCTGTCCGGAGGACCTTCCAGGCTGTAGAGACTTCCTCCGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: LNTIGSVRRTFQAVETSSGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GGAGGAAGTCTCTACAGCCTGGAAGGTCCTCCGGACAGAACCTATTGTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: NTGDGAQVDAFAIGCSMQGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...CTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCGAGTCTTGGGATCAGTaGGGTCCACCACAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMAESWDQ*GPPQRD
Trigger: ATCCCTCTGTGGTGGACCCCACTGATCCCAAGACTC...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTTGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVISMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp AAAGGAAATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCTCAATGTGGGACCCATaGAAGGCAAAGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGNTGDGAQVDAFAIGCSSMWDP*KAKVLP
Trigger: TGGCAGCACCTTTGCCTTCCATGGGTCCCACATTGA...GGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCAGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTGGAATGTTCTTGCAGTaGCCACTGACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: YLWTSSSLEGILCCPFPIGMFLQ*PLTKGE
Trigger: CTCTCCTTTGGTCAGTGGTCACTGCAAGAACATTCC...AATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACAACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMAHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: LYLWTSSSLEGILCCPFPLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...GGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTGCTGAGAGGTAGTTTGACAATGTGTGACCTGTTGCTAGAGATGATCCACTGCCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLRGSLTMCDLLLEMIHCLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...GCAGTGGATCATCTCTAGCAACAGGTCACACATTGTCAAACTACCTCTCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
CDS-3UTR GCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAACTGGTGTGAGGTGTaGATGAACTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNNWCEV*MNFSLL
Trigger: CAGCAGGCTGAAGTTCATGCACACCTCACACCAGTT...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000569795.6
CDS-3UTR GCA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCACCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: NVGIAHLTILIYKEESCAPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR GCA 90 bp ATGAGTACAAATGAATGTCTATTCATGCAGAGATTGCAGACGAGGGGTGGGGAACCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: MSTNECLFMQRLQTRGGEPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...TTCCCCACCCCTCGTCTGCAATCTCTGCATGAATAGACATTCATTTGTACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVIHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR GCA 90 bp ACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSSSLEGILCCPFPIPEYHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...ATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR GCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATCATGGAAGGCAAAGGTaGTGCCATAGAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADHGRQR*CHRASW
Trigger: CCAAGAAGCTCTATGGCAGCACCTTTGCCTTCCATG...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: YLWTSSSLEGILCCPFPILRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...AATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567042.1
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVIQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: QFGVGCIDQPIAQDRMPVLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...AACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567042.1
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: FGVGCIDQPIAQDRMPVLLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000567440.5
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTTCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCCAAGGGCTGTTGCTaGTTGGTTTCTGTTGTTCGT +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGSKGCC*LVSVVR
Trigger: ACGAACAACAGAAACCAAGCAGCAACAGCCCTTGGA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTGTCCATTGGGTCAGTaGGTCACACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGCPLGQ*VTHTLR
Trigger: CCTGAGAGTGTGTGTGACCCACTGACCCAATGGACA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACGCCTTTGATGTCCATTaGGTCAGTGGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYAFDVH*VSGSHT
Trigger: TGTGTGTGACCCACTGACCCAATGGACATCAAAGGC...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGSSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: SLDQLILGGHPVLSFSHSSSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...GGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ACCTCAATGGATGGTTCTGGTCCATCTAGGTACTGGGAGAGAGAAAATCGCAGCGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TSMDGSGPSRYWERENRSVCIKL*VSIQVS
Trigger: GCTGACCTGTATCGACACCCACAGCTTGATGCAGAC...GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVIGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGACCTGCCTGGGGGCTaGGAGGGTAGCCAAACACTT +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTDLPGG*EGSQTL
Trigger: AAGTGTTTGGCTACCCTCCCAGCCCCCAGGCAGGTC...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAAC +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGLSRRN*CEVCMN
Trigger: GTTCATGCACACCTCACACCAGTTCCTCCTGCTGAG...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGAACCGAGCCTCCTTaGCAGGAGGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVGTEPP*QEGCSA
Trigger: TGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CCA 90 bp GCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAATGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AHPWRASCAVLFPFLSIQCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...TTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGGTGGTACGAGGGCTaGGGCCCCCTCAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSGWYEG*GPLSLC
Trigger: ACACAAACTGAGGGGGCCCCAGCCCTCGTACCACCC...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTGGGGATGGAGTCAGTCTaGGCCATCCGAATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: EGILCCPFPIPEYPKEILGMESV*AIRMWS
Trigger: ACTCCACATTCGGATGGCCCAGACTGACTCCATCCC...CAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
3UTR CAA 72 bp ATGGGTGAAAAGATGCTGAGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTGAACCAACTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: MGEKMLRPARNF*MVPLALNQLCL
Trigger: GAGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
3UTR CAA 72 bp ATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCCTGTATGATAGGGAAA +
Preference number: 4 (lower is better)
Translates to: MRRPTRSSGTPS*PFSMESCMIGK
Trigger: TTTCCCTATCATACAGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: VSLDQLILGGHPVLSFSHRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...ATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACATGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCAAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: NVGIAHLTILIYKEESCARWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCAGGAATGTTCTTGCAGTaGCCACTGACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSGMFLQ*PLTKGE
Trigger: CTCTCCTTTGGTCAGTGGTCACTGCAAGAACATTCC...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGGAATGTTCTTGCAGTaGCCACTGACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGGMFLQ*PLTKGE
Trigger: CTCTCCTTTGGTCAGTGGTCACTGCAAGAACATTCC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: HTHDFLLYLGVLSINVGILQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCACTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NVGIAHLTILIYKEESCALQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR TCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTTGCAGGAACCGTGACTaGATGGATCGGGTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVCRNRD*MDRVWG
Trigger: CCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCA...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCATTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTATTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTGAGATCCAGAATGTaGAGATCTTGGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLRSRM*RSWGEV
Trigger: AACCTCACCCCAAGATCTTCACATTCTGGATCTCAG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287196.13
ENST00000567440.5
ENST00000569795.6
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGGGAATGTTCTTGCAGTaGCCACTGCCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQGMFLQ*PLPGGW
Trigger: CCAGCCCCCAGGCAGTGGTCACTGCAAGAACATTCC...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569173.5
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVILVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: ISGPAHPWRASCAVLFPFPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...GAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CATTTTGGAAGACATGCTGCTCATCACACACCACACAGTACTCATTCAATGTTGAGTGGCCACCTCCTCTaGAGCTCCAGACATGACGCC +
Preference number: 4 (lower is better)
Translates to: HFGRHAAHHTPHSTHSMLSGHLL*SSRHDA
Trigger: GGCGTCATGTCTGGAGCTGCAGAGGAGGTGGCCACT...CAACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGAAGGCAAAGGTGCTaGCATAGAGCTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNGRQRC*HRASWR
Trigger: CCGCCAAGAAGCTCTATGGCAGCACCTTTGCCTTCC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMALEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAATACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AHPWRASCAVLFPFLSIQYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...TTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAAGGGGATGGCAGGCTCTaGTGTTGCGGTGGTAACAAG +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEGDGRL*CCGGNK
Trigger: CTTGTTACCACCGCAACAGCAGAGCCTGCCATCCCC...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567440.5
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTGTCCATTGGGTCAGTaGGTCACACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMCPLGQ*VTHTLR
Trigger: CCTGAGAGTGTGTGTGACCCACTGACCCAATGGACA...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLSSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWSSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMAGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATGGTTCTGGTCCATCTAGGTACTGGGAGAGAGAAAATCGCAGCCTCAACACAGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: DGSGPSRYWERENRSLNTGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...TGTGTTGAGGCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: PAHPWRASCAVLFPFLSITSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...GATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CCA 90 bp CACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATGGAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: HKVLYSLDSDSAGTVTEWKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...CCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAACACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: TSSSLEGILCCPFPIPEYIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...ATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTIQRKY*RWGSGR
Trigger: TCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWIQRKY*RWGSGR
Trigger: TCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGACCGCCCTGTGCCCGTaGTGGCGGCCACACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRTALCP*WRPHRP
Trigger: TGGCCTGTGTGGCCGCCACCACGGGCACAGGGCGGT...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR TCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACTCCAGAACTGGCCTTTaGTGTCCATTGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHSRTGL*CPLGQW
Trigger: CCACTGACCCAATGGACATCAAAGGCCAGTTCTGGA...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TATGTGCTCCAAATACAGCACTCGGGAACAAGACTCCTGGCCTACATGACAAATTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: YVLQIQHSGTRLLAYMTNWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...ATTTGTCATGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTTGGAGCACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp ATTTTGGAAGACATGCTGCTCATCACACACCACACAGTACTCATTCAATGTTGGCTGCAGCTCCAGACATaGCGCCCAGTGTGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: ILEDMLLITHHTVLIQCWLQLQT*RPVCRR
Trigger: CCTTCTACACACTGGGCGTCATGTCTGGAGCTGCAG...CCAACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR TCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTHDFLLYLGVLSINVGIWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTGTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: EGILCCPFPIPEYPKEILLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...CAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR TCA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVICILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCTCTTGCAGTGACCACTaGCCTGGGGGCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCSCSDH*PGGWEG
Trigger: ACCCTCCCAGCCCCCAGGTCAGTGGTCACTGCAAGA...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564610.5
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTCGATACAGGTCAGCTaGACAGCTCCCCTGAACGCC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSSIQVS*TAPLNA
Trigger: GGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGA...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGAAGAATATGTGCTCCAAATACAGCACTCGGGAACAAGACTCCTGGCCTACACACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: MKNMCSKYSTREQDSWPTHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...TGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTTGGAGCACATATTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp ACCTCAATGGATGGTTCTGGTCCATCTAGGTACTGGGAGAGAGAAAATCGCAGCCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TSMDGSGPSRYWERENRSLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp CGCCCAGTGTGTAGAAGGAGAAAACGCATAGTTCACGAGTACAGACAGCTGGCTTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: RPVCRRRKRIVHEYRQLAFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...AGCCAGCTGTCTGTACTCGTGAACTATGCGTTTTCTCCTTCTACACACTGGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCAGATCCACCACCTCTaGTCCAGTGGCCACCTCCTC +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNQIHHL*SSGHLL
Trigger: GAGGAGGTGGCCACTGGAGCAGAGGTGGTGGATCTG...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAACTGGTGTGAGGTGTaGATGAACTTCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMNWCEV*MNFSLL
Trigger: CAGCAGGCTGAAGTTCATGCACACCTCACACCAGTT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000569795.6
CDS-3UTR GCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCCTTGGCAGGAGGGCTaGTCAGCAGGAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVPWQEG*SAGGTG
Trigger: ACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR GCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACATTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: FLQFGVGCIDQPIAQDRMQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...CATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR GCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGCGTTAGGCCAGAAGTaGCAACTTTTCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGALGQK*QLFTVF
Trigger: AAAGACCGTGAAAAGTTGGCACTTCTGGCCTAACGC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR GCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGGCAGGCTCTGCTGTTaGGGTGGTAACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTGRLCC*GGNKSL
Trigger: CAGTGACTTGTTACCACCGCAACAGCAGAGCCTGCC...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567440.5
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTGTCAGGTAGATGCCTTTaGCATAGGCTGCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: EGILCCPFPIPEYPKEILSGRCL*HRLLHA
Trigger: TGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGA...CAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTGTCCATTGGGTCAGTaGGTCACACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNCPLGQ*VTHTLR
Trigger: CCTGAGAGTGTGTGTGACCCACTGACCCAATGGACA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTGCCTTTGATGTCCATTaGGTCAGTGGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSAFDVH*VSGSHT
Trigger: TGTGTGTGACCCACTGACCCAATGGACATCAAAGGC...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNSSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: FGVGCIDQPIAQDRMPVLAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...GAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: QFGVGCIDQPIAQDRMPVQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...AACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: YLWTSSSLEGILCCPFPIIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...AATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMASKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGACCAGCTCATCCTTaGAGGGCATCCTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSGPAHP*RASCAV
Trigger: GACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMAIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: LYLWTSSSLEGILCCPFPMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...GGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CTGTTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLYLWTSSSLEGILCCPFIQRKY*RWGSGR
Trigger: TCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT...AAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR CCA 90 bp ATTTCCAAATATGAGCCCTGGGTCATCTCCCGAATAGACATCACACTATCCAGATGCCAGTTCTCAATGTaGGACCCACCTGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ISKYEPWVISRIDITLSRCQFSM*DPPAER
Trigger: CCTCTCAGCAGGTGGGTCCCACATTGAGAACTGGCA...TCTGGATAGTGTGATGTCTATTCGGGAGATGACCCAGGGCTCATATTTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR CAA 72 bp AGTTCTCAATGTGGGACCCACCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTGCTAGAGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: SSQCGTHLLRGS*TMCDLLLEMIH
Trigger: GTGGATCATCTCTAGCAACAGGTCACACATTGTCAAACTACCTCTCAGCAGGTGGGTCCCACATTGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
3UTR CAA 72 bp GTGTGCATGAACTTCAGCTGCCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTGCTAGAGATGATCCAC +
Preference number: 4 (lower is better)
Translates to: VCMNFSCLLRGS*TMCDLLLEMIH
Trigger: GTGGATCATCTCTAGCAACAGGTCACACATTGTCAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCACAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR TCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATTCCAGAACTGGCCTTTaGTGTCCATTGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYSRTGL*CPLGQW
Trigger: CCACTGACCCAATGGACATCAAAGGCCAGTTCTGGA...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp ATTTCCAAATATGAGCCCTGGGTCATCTCCCGAATAGACATCACACTATCCAGATCCAGAACTGGCCTTTaGTGTCCATTGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: ISKYEPWVISRIDITLSRSRTGL*CPLGQW
Trigger: CCACTGACCCAATGGACATCAAAGGCCAGTTCTGGA...TCTGGATAGTGTGATGTCTATTCGGGAGATGACCCAGGGCTCATATTTGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR TCA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCGACTCTGCAGGAACCGTGACTGAATGGATCGGGTCTGGGGGATGGTATTCAAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SDSAGTVTEWIGSGGWYSKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...TGAATACCATCCCCCAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTTGGTGTAGGATGCATTaGCCAGCCCATTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVWCRMH*PAHCAG
Trigger: TCCTGCGCAATGGGCTGGTCAATGCATCCTACACCA...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCATGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCTCCTTTTCCCATTCCTaGGTATCCAAAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: PAHPWRASCAVLFPFLSISFSHS*VSKGNT
Trigger: AGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGA...GATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR TCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCTCCTTTTCCCATTCCTaGGTATCCAAAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWISFSHS*VSKGNT
Trigger: AGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGA...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCACACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: NVGIAHLTILIYKEESCAHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAACACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CAAATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATGCCTTGAACCAACTGTaGCTCTTCTCCTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QILPYLMAGKPQWMVLVHALNQL*LFSCWV
Trigger: GACCCAGCAGGAGAAGAGGCACAGTTGGTTCAAGGC...ATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp TTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTAGGTACTGGGAGACTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LMAGKPQWMVLVHLGTGRLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...TCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: PAHPWRASCAVLFPFLSIWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...GATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCTAGAGATGATCCACTaGAGGAGAGGATGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQLEMIH*RRGWAR
Trigger: CCTGGCCCATCCTCTCCTGCAGTGGATCATCTCTAG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMAQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTTCACGGTCTTTGTTaGTGCAGAAGTCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLFHGLC*CRSQEK
Trigger: TTTTTCTTGACTTCTGCAGCAACAAAGACCGTGAAA...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR GCA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTTTCACGGTCTTTGTTaGTGCAGAAGTCAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: AASAAVPEHFYEGRWILGFHGLC*CRSQEK
Trigger: TTTTTCTTGACTTCTGCAGCAACAAAGACCGTGAAA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR GCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGTTAGGCCAGAAGTaGCAACTTTTCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMALGQK*QLFTVF
Trigger: AAAGACCGTGAAAAGTTGGCACTTCTGGCCTAACGC...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTGCATGAACTTCAGCTaGCTGCTGAGAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMCMNFS*LLRGSL
Trigger: CAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCA...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567974.5
CDS-3UTR CCA 90 bp ACCTCAATGGATGGTTCTGGTCCATCTAGGTACTGGGAGAGAGAAAATCGCAGCAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: TSMDGSGPSRYWERENRSKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACCAGAACCATCCATTGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: NLSSDHTHDFLLYLGVLSSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...ACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTGCCAGTTCTCAATGTaGGACCCATGGAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNCQFSM*DPWKAK
Trigger: CTTTGCCTTCCATGGGTCCCACATTGAGAACTGGCA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCAAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: NVGIAHLTILIYKEESCANLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GAAGACATGCTGCTCATCACACACCACACAGTACTCATTCAATGTTGGAATCCTAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: EDMLLITHHTVLIQCWNPNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...AGGATTCCAACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAGCATGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCAATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSIQRKY*RWGSGR
Trigger: TCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCCAGAACTGGCCTTTaGTGTCCATTGGGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQSRTGL*CPLGQW
Trigger: CCACTGACCCAATGGACATCAAAGGCCAGTTCTGGA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYIEKFL*FIISLR
Trigger: TCGGAGGGAGATAATGAATCAGAGGAATTTCTCTAT...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: RAASAAVPEHFYEGRWILKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGGTGAAAAGATGCTaGGGCCAGCTCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQWVKRC*GQLGTS
Trigger: AGAAGTTCCGAGCTGGCCTCAGCATCTTTTCACCCA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCATTGCTCAGATGTTTCCATTGTTGGGATGTAAACATACCCAGGATCTTTTTCAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLLRCFHCWDVNIPRIFFRWNGS*GAQPEA
Trigger: AGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCT...GAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCCTTGATTTCCAAATATaGGCCCTGGGTCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGLDFQI*ALGHLP
Trigger: CGGGAGATGACCCAGGGCTCATATTTGGAAATCAAG...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTCAGGAGGAACTGGTGTaGGGTGTGCATGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVQEELV*GVHELQ
Trigger: CTGAAGTTCATGCACACCTCACACCAGTTCCTCCTG...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR TCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACACTCTGCAGGAACCGTaGCTGAATGGATCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNTLQEP*LNGSGL
Trigger: CAGACCCGATCCATTCAGTCACGGTTCCTGCAGAGT...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCTTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTTGGCATCGCCCACCTaGCCATCCTCATATCTGAAC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSLASPT*PSSYLN
Trigger: GTTCAGATATGAGGATGGTCAGGTGGGCGATGCCAA...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569173.5
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACACCATTTTGGAAGACATaGTGCTCATCACACACCACA +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTPFWKT*CSSHTT
Trigger: TGTGGTGTGTGATGAGCAGCATGTCTTCCAAAATGG...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGCCTTTGCCATAGGCTaGTCCATGCAGCTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSAFAIG*SMQLQF
Trigger: AAACTGCAGCTGCATGGAGCAGCCTATGGCAAAGGC...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGAACTGGTGTGAGGTGTaGATGAACTTCAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VCVNLSSDHTHDFLLYLGNWCEV*MNFSCL
Trigger: CAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT...CCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565443.5
CDS-3UTR CCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTGTCCATTGGGTCAGTaGGTCACACACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSCPLGQ*VTHTLR
Trigger: CCTGAGAGTGTGTGTGACCCACTGACCCAATGGACA...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: HTHDFLLYLGVLSINVGIGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTGGAAAACCTCAATaGATGGTTCTGGTCCATCTA +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMAGKPQ*MVLVHL
Trigger: TAGATGGACCAGAACCATCCATTGAGGTTTTCCAGC...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACACAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GCTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: AVLFPFLQFGVGCIDQPIMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...AATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCAACTGGTGATCTGTTaGGGATGGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVQLVIC*GWQALL
Trigger: CAGCAGAGCCTGCCATCCCCAACAGATCACCAGTTG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
CDS-3UTR TCA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTGAGATCCAGAATGTaGAGATCTTGGGGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYLRSRM*RSWGEV
Trigger: AACCTCACCCCAAGATCTTCACATTCTGGATCTCAG...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR TCA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCTCCTTTTCCCATTCCTaGGTATCCAAAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: STMKATSYISFSCPLVMASFSHS*VSKGNT
Trigger: AGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGA...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNHGFNV*IKLWVS
Trigger: CGACACCCACAGCTTGATGCAGACATTGAAGCCGTG...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTHDFLLYLGVLSINVGILDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCAGTTTGGTGTAGGATaGATTGACCAGCCCATTGCG +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSQFGVG*IDQPIA
Trigger: CGCAATGGGCTGGTCAATGCATCCTACACCAAACTG...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATGGCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: HKVLYSLDSDSAGTVTEWQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...CCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCGGCAGGCTCTGCTGTTaGGGTGGTAACAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCGRLCC*GGNKSL
Trigger: CAGTGACTTGTTACCACCGCAACAGCAGAGCCTGCC...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000565443.5
ENST00000567440.5
CDS-3UTR GCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCTGGGGCTCAGGTAGATaGCTTTGCCATAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCWGSGR*LCHRLL
Trigger: GAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCA...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR GCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCTGCATGAACTTCAGCTaGCTGCTGAGAGGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGCMNFS*LLRGSL
Trigger: CAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCA...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565443.5
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGCCTTTGATGTCCATTaGGTCAGTGGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVAFDVH*VSGSHT
Trigger: TGTGTGTGACCCACTGACCCAATGGACATCAAAGGC...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGTCCATCTAGGTACTaGGAGAGAGAAAATCGCAGC +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVGPSRY*ERENRS
Trigger: GCTGCGATTTTCTCTCTCCCAGTACCTAGATGGACC...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGACACTGCAGGAGAGGATaGGCCAGGGGATCCAACTTG +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGHCRRG*ARGSNL
Trigger: CAAGTTGGATCCCCTGGCCCATCCTCTCCTGCAGTG...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGATGCCATAGAGCTTCTTaGCGGTCCGGAACCGAGCCT +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGCHRAS*RSGTEP
Trigger: AGGCTCGGTTCCGGACCGCCAAGAAGCTCTATGGCA...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAAATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAAGGGCAGATGGATCCTaGGGTAACAGGGGTGGTACG +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGRADGS*GNRGGT
Trigger: CGTACCACCCCTGTTACCCCAGGATCCATCTGCCCT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGAGGAAATACTGGAGATaGGGCTCAGGTAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: VCVNLSSDHTHDFLLYLGRKYWR*GSGRCL
Trigger: AAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCT...CCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR TCA 90 bp GTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: VCVNLSSDHTHDFLLYLGRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...CCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAAGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGATTGGTAATGGCCCCTTaGTTCCTCAGGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGLVMAP*FLRAAS
Trigger: TGAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAA...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp GAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTATCCAAAGGAAATACTGTCCTTTTCCCATTCCTaGGTATCCAAAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: EGILCCPFPIPEYPKEILSFSHS*VSKGNT
Trigger: AGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGA...CAGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCTGGTACACCTAGTTTaGCTTTCAGCATGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQLVHLV*LSAWSP
Trigger: AGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNLEGIL*CPFPIP
Trigger: AGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAA...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAACAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATCATCATTCCAGAACTaGCCTTTGATGTCCATTGGG +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTESSFQN*PLMSIG
Trigger: CCCAATGGACATCAAAGGCCAGTTCTGGAATGATGA...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDKLMLM*RSMSTS
Trigger: TGACGTGGACATTGACCTCCACATCAACATCAGCTT...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACAAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAAAGCTGCCCTACACATaGCCACCAGCAGATCCACCA +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGKLPYT*PPADPP
Trigger: TGGTGGATCTGCTGGTGGCCATGTGTAGGGCAGCTT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCTGGGCCATCCGAATGTaGAGTAGTTCTTGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVWAIRM*SSSWVK
Trigger: CTTGACCCAAGAACTACTCCACATTCGGATGGCCCA...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGGAAAGTCAGGGGATaGAGTCAGTCTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRGKVRG*SQSGPS
Trigger: GGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: SSTMKATSYISFSCPLVMKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTAGGATCTTTTTCAACTaGAGACCCAGCCCAAATCCT +
Preference number: 4 (lower is better)
Translates to: NPSLFDGWKTSMDGSGPSRIFFN*RPSPNP
Trigger: AGGATTTGGGCTGGGTCTTCAGTTGAAAAAGATCCT...AGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGCATACTTCATGATCTaGACGAGGAATCCATACTCC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSAYFMI*TRNPYS
Trigger: GGAGTATGGATTCCTCGTTCAGATCATGAAGTATGC...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCTTGGCATCGCCCACCTaGCCATCCTCATATACAAAG +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCLASPT*PSSYTK
Trigger: CTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAA...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTCCGATCACACGCATaGTTTCCTTCTGTATCTTGG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQFRSHA*FPSVSW
Trigger: CCAAGATACAGAAGGAAATCATGCGTGTGATCGGAA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACTACATATCCTTTTCCTaGCCCTTGGTAATGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNYISFS*PLVMAP
Trigger: AGGGGCCATTACCAAGGGGCAGGAAAAGGATATGTA...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQQTLPL*GSSWYR
Trigger: CCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGACGAGTACAGACAGCTaGCTTCAGCATAGATCCATT +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQTSTDS*LQHRSI
Trigger: AATGGATCTATGCTGAAGCCAGCTGTCTGTACTCGT...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCTCCAAATATGAGCCCTaGGTCATCTCCCGAATAGAC +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVSKYEP*VISRID
Trigger: GTCTATTCGGGAGATGACCCAGGGCTCATATTTGGA...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACATCGGGTCTGGGGGATaGTATTCATCCTGTTGTATC +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNIGSGG*YSSCCI
Trigger: GATACAACAGGATGAATACCATCCCCCAGACCCGAT...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAAATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAAATCTTGTGCAGACATaGTCGGACACAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGNLVQT*SDTGHT
Trigger: GGTGTGCCCTGTGTCCGACCATGTCTGCACAAGATT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTATCCAAAGGAAATACTaGAGATGGGGCTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSIQRKY*RWGSGR
Trigger: TCTACCTGAGCCCCATCTCCAGTATTTCCTTTGGAT...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
3UTR CAA 72 bp CTGTGCCTCTTCTCCTGCTGGGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGTTGGGATGTAAACATA +
Preference number: 4 (lower is better)
Translates to: LCLFSCWVFKKS*LRCFHCWDVNI
Trigger: TATGTTTACATCCCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR TCA 90 bp CACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATGGAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: HKVLYSLDSDSAGTVTEWKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...CCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGGAATGTTCTTGCAGTaGCCACTGACCAAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGGMFLQ*PLTKGE
Trigger: CTCTCCTTTGGTCAGTGGTCACTGCAAGAACATTCC...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp ATTGCTCAGATGTTTCCATTGTTGGGATGTAAACATACCCAGGATCTTTTTCAAGACTCCTGGCCTACATaGCAAATTCCACAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: IAQMFPLLGCKHTQDLFQDSWPT*QIPQVQ
Trigger: CTGGACTTGTGGAATTTGTCATGTAGGCCAGGAGTC...TTGAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCCTTGATGGTACCACTTaGCTTGAACCAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCLDGTT*LEPTVP
Trigger: AGGCACAGTTGGTTCAAGGCAAGTGGTACCATCAAG...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp CACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: HTHDFLLYLGVLSINVGIWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...GATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR GCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCTTTTGGAAGACATGCTaGTCATCACACACCACACAG +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVFWKTC*SSHTTQ
Trigger: CTGTGTGGTGTGTGATGAGCAGCATGTCTTCCAAAA...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCAAAGAAGAATCTTGTaGAGACATGGTCGGACACAG +
Preference number: 4 (lower is better)
Translates to: DVITSQSAIQFRFRLCRNQRRIL*RHGRTQ
Trigger: CTGTGTCCGACCATGTCTGCACAAGATTCTTCTTTG...GTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGCCTTTGATGTCCATTaGGTCAGTGGGTCACACACA +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGAFDVH*VSGSHT
Trigger: TGTGTGTGACCCACTGACCCAATGGACATCAAAGGC...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp GTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VCVNLSSDHTHDFLLYLGSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...CCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGATGTTCCCATGCTTCTaGAGGTCCTTAGATGTAATC +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQMFPCF*RSLDVI
Trigger: GATTACATCTAAGGACCTCCAGAAGCATGGGAACAT...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR TCA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCCTTTTCCCATTCCTaGGTATCCAAAGGAAATACT +
Preference number: 4 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQSFSHS*VSKGNT
Trigger: AGTATTTCCTTTGGATACTCAGGAATGGGAAAAGGA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGACTGTGCCTCTTCTCCTaGTGGGTCTTCAAGAAATCA +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGLCLFS*WVFKKS
Trigger: TGATTTCTTGAAGACCCAGCAGGAGAAGAGGCACAG...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTGGAATCCTCTGTTCTaGATACTTCATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSWNPLF*ILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCA...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGTTGCGCAGGATCGAATaGCAGTTCTCAATGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRLRRIE*QFSMWD
Trigger: GTCCCACATTGAGAACTGGCATTCGATCCTGCGCAA...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGAAACTGGGAGACTTaGGGATGGGTGAAAAGATGC +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRGNWET*GWVKRC
Trigger: GCATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCC...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp AATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTAAATCCTTCCTTATTTaGTGGCTGGAAAACCTCAAT +
Preference number: 4 (lower is better)
Translates to: NPSLFDGWKTSMDGSGPSKSFLI*WLENLN
Trigger: ATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTT...AGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR GCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGACCCAGATGTTCCCATaGTTCTGGAGGTCCTTAGAT +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRTQMFP*FWRSLD
Trigger: ATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGT...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGACTTTCCAAGGGCTGTTaGTGCTTGGTTTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGLSKGC*CLVSVV
Trigger: AACAACAGAAACCAAGCAGCAACAGCCCTTGGAAAG...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS-3UTR CCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGIHTPE*ECSCSD
Trigger: GTCACTGCAAGAACATTCCCACTCTGGAGTATGGAT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR TCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGTGTATCTTGGGGTCCTaGGTATTAATGTTGGCATCG +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRCILGS*VLMLAS
Trigger: CGATGCCAACATTAATACTCAGGACCCCAAGATACA...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCACGGTCTTTGTTGCTaGAGAAGTCAAGAAAAATTT +
Preference number: 4 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVHGLCC*RSQEKF
Trigger: AAATTTTTCTTGACTTCTGCAGCAACAAAGACCGTG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR CCA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
3UTR CAA 72 bp CTGGGTCTTCAAGAAATCATTGCTCAGATGTTTCCATaGTTGGGATGTAAACATACCCAGGATCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LGLQEIIAQMFP*LGCKHTQDLFQ
Trigger: TTGAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAATGATTTCTTGAAGACCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp ATTGCTCAGATGTTTCCATTGTTGGGATGTAAACATACCCAGGATCTTTTTCAAAGATGTTTCCATTGTTaGGATGTAAACATACCCAGG +
Preference number: 4 (lower is better)
Translates to: IAQMFPLLGCKHTQDLFQRCFHC*DVNIPR
Trigger: CCTGGGTATGTTTACATCCCAACAATGGAAACATCT...TTGAAAAAGATCCTGGGTATGTTTACATCCCAACAATGGAAACATCTGAGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CCA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAAGCATAGATCCATTTTaGAAGACATGCTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGSIDPF*KTCCSS
Trigger: TGATGAGCAGCATGTCTTCCAAAATGGATCTATGCT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGATGTGGAGTAGTTCTTaGGTCAAGCTCTACCATGAA +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRMWSSS*VKLYHE
Trigger: TTCATGGTAGAGCTTGACCCAAGAACTACTCCACAT...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR GCA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGCACGGTCTTTGTTGCTaGAGAAGTCAAGAAAAATTT +
Preference number: 4 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRHGLCC*RSQEKF
Trigger: AAATTTTTCTTGACTTCTGCAGCAACAAAGACCGTG...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS GCA 90 bp GGGGCGAGCCCCGCACCCTTCCCGTGGCCCGGCCGCACCGCCCTGTaGCCGTGGTGGCGGCCACACAGGCCAGCCTGGCGAGTACTCACG +
Preference number: 5 (lower is better)
Translates to: GASPAPFPWPGRTAL*PWWRPHRPAWRVLT
Trigger: CGTGAGTACTCGCCAGGCTGGCCTGTGTGGCCGCCACCACGGGCACAGGGCGGTGCGGCCGGGCCACGGGAAGGGTGCGGGGCTCGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566844.1
ENST00000569795.6
CDS TCA 90 bp AGACGCTCTGGGCCCGATCTATGCCGCCCGGCCGCCGGGCCTGAGTaGAGCCTGTCCAGCCTAGGAGGGGCCCTCAGAACCTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: RRSGPDLCRPAAGPE*SLSSLGGALRTSRS
Trigger: GGACCGGGAGGTTCTGAGGGCCCCTCCTAGGCTGGACAGGCTTCACTCAGGCCCGGCGGCCGGGCGGCATAGATCGGGCCCAGAGCGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566844.1
CDS TCA 90 bp GGAAAGACGCTCTGGGCCCGATCTATGCCGCCCGGCCGCCGGGCCTaGGTGAAGCCTGTCCAGCCTAGGAGGGGCCCTCAGAACCTCCCG +
Preference number: 5 (lower is better)
Translates to: GKTLWARSMPPGRRA*VKPVQPRRGPQNLP
Trigger: CGGGAGGTTCTGAGGGCCCCTCCTAGGCTGGACAGGCTTCACTCAGGCCCGGCGGCCGGGCGGCATAGATCGGGCCCAGAGCGTCTTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566844.1
CDS-3UTR CAA 90 bp CTTGGCGGTCCGGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAATGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: LGGPEPSLLGRRAAQQEEWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...TTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CAA 90 bp GGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTGGTGTGAGGGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: GTEPPWQEGCSAGGTGVRALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...CCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS CCA 90 bp CGGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAACTTCAGCCTGCTGAGAGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: RNRASLAGGLLSRRN*CEVCMNFSLLRGSL
Trigger: CAAACTACCTCTCAGCAGGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000544520.5
ENST00000564610.5
ENST00000569795.6
CDS-3UTR CAA 90 bp TTCTTGGCGGTCCGGAACCGAGCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: FLAVRNRASLAGGLLSRRLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...CCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCGGACCGCCAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS-3UTR CAA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CAA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CAA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CAA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: STMKATSYISFSCPLVMARNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
CDS-3UTR CAA 90 bp AACTGGTGTGAGGTGTGCATGAACTTCAGCTGCCTGCTGAGAGGTAGTTTGACACGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: NWCEVCMNFSCLLRGSLTRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...TGTCAAACTACCTCTCAGCAGGCAGCTGAAGTTCATGCACACCTCACACCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS CCA 90 bp CAATCAGTTGGAGAGGTGGGCAGTCAGTTCTCACCATTGGGTCAGTaGGTCACACACACTCTCAGGTCAGTGCTAGGCAGCACCCCTCCA +
Preference number: 5 (lower is better)
Translates to: QSVGEVGSQFSPLGQ*VTHTLRSVLGSTPP
Trigger: TGGAGGGGTGCTGCCTAGCACTGACCTGAGAGTGTGTGTGACCCACTGACCCAATGGTGAGAACTGACTGCCCACCTCTCCAACTGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS-3UTR CAA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: AASAAVPEHFYEGRWILGLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAATGGCGGAACCGAGCCTCCTaGGCAGGAGGGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HKVLYSLDSDSAGTVTEWRNRAS*AGGLLS
Trigger: GCTGAGCAGCCCTCCTGCCAAGGAGGCTCGGTTCCG...CCATTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
CDS-3UTR CAA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: RAASAAVPEHFYEGRWILWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: AASAAVPEHFYEGRWILGWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTGAGTTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: GPAHPWRASCAVLFPFLSWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...ACTCAGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCACTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: AASAAVPEHFYEGRWILGPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCAATGTGGGACCCCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: CIDQPIAQDRMPVLNVGPPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...GGGTCCCACATTGAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CAA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCACCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: LRAASAAVPEHFYEGRWILKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: GKVRGWSQSGPSECGVVLLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...AAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: GWSQSGPSECGVVLGSSSLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...AGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGCAGCTGCAGACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: GDGAQVDAFAIGCSMQLQTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...CTGCAGCTGCATGGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR CAA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: FLRAASAAVPEHFYEGRWWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...CCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGACAACTGGTGATCTGTaGGGGATGGCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWTTGDL*GMAGSA
Trigger: AGCAGAGCCTGCCATCCCCAACAGATCACCAGTTGT...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CAA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCACAACTGGTGATCTGTaGGGGATGGCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSTTGDL*GMAGSA
Trigger: AGCAGAGCCTGCCATCCCCAACAGATCACCAGTTGT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CAA 90 bp TTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCACAACTGGTGATCTGTaGGGGATGGCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LYLWTSSSLEGILCCPFPTTGDL*GMAGSA
Trigger: AGCAGAGCCTGCCATCCCCAACAGATCACCAGTTGT...GGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS CCA 90 bp CTCACTGTAGATCTCCTTCACGGCTTCAATGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGCTGCACAGCTCCCCTGAACGCCATA +
Preference number: 5 (lower is better)
Translates to: LTVDLLHGFNVCIKL*VSIQVSCTAPLNAI
Trigger: TATGGCGTTCAGGGGAGCTGTGCAGCTGACCTGTATCGACACCCACAGCTTGATGCAGACATTGAAGCCGTGAAGGAGATCTACAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000565443.5
ENST00000565999.5
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: DMVGHRAHPDVPMLLEVLLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...AAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: STMKATSYISFSCPLVMAALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCATGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GHTQMFPCFWRSLDVITSWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...TGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: FPFLQFGVGCIDQPIAQDWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...ATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CAA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACACAACTGGTGATCTGTaGGGGATGGCAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYTTGDL*GMAGSA
Trigger: AGCAGAGCCTGCCATCCCCAACAGATCACCAGTTGT...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
CDS-3UTR CAA 90 bp GCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCAGCATGGAGTCCTGTACAGCTAGACATGTTGTaGGCAGGTACTAGCCCCACT +
Preference number: 5 (lower is better)
Translates to: AQPEALVHLVCLSAWSPVQLDML*AGTSPT
Trigger: AGTGGGGCTAGTACCTGCCAACAACATGTCTAGCTG...TACAGGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp ATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCTATTCATGCAGAGATaGCAGACGAGGGGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: ISGPAHPWRASCAVLFPFLFMQR*QTRGGE
Trigger: TTCCCCACCCCTCGTCTGCAATCTCTGCATGAATAG...GAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000567042.1
CDS TCA 90 bp CTTCCACTTTGGGGTTCTTCATGGTACAGGAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: LPLWGSSWYRRWNGS*GAQPEALVHLVCLS
Trigger: TGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCTCCTGTACCATGAAGAACCCCAAAGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS GCA 90 bp GGATACAGAGTTCTCACTGTAGATCTCCTTCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCGATACAGGTCAGCTGCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GYRVLTVDLLHGFNV*IKLWVSIQVSCTAP
Trigger: GGGAGCTGTGCAGCTGACCTGTATCGACACCCACAGCTTGATGCAGACATTGAAGCCGTGAAGGAGATCTACAGTGAGAACTCTGTATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000565443.5
ENST00000565999.5
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 90 bp TTTGAAAATAAACAGTCAAGTGTTGCATTTAGCGCCCCGAGTGGTTaGGAGGAACAAGCAGGAAGGGCAACCCAGGTTGCCTGTAGGCCG +
Preference number: 5 (lower is better)
Translates to: FENKQSSVAFSAPSG*EEQAGRATQVACRP
Trigger: CGGCCTACAGGCAACCTGGGTTGCCCTTCCTGCTTGTTCCTCCCAACCACTCGGGGCGCTAAATGCAACACTTGACTGTTTATTTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568360.5
CDS-3UTR CAA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTATTCCAGAACTGGCCTTaGATGTCCATTGGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVFQNWP*MSIGSV
Trigger: CACTGACCCAATGGACATCAAAGGCCAGTTCTGGAA...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGACATGGTCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: QTWSDTGHTQMFPCFWRSQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...GGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGACCATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: PQLLYLNTFMRADGSWGNPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...GTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: QFGVGCIDQPIAQDRMPVGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...AACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: RAASAAVPEHFYEGRWILSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LRAASAAVPEHFYEGRWISGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TTCATGAGGCGCCCAACCCGAAGCTCTGGTACACCTAGTTTGCCTTTCAGCATGTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FMRRPTRSSGTPSLPFSMSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...CATGCTGAAAGGCAAACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: TGHTQMFPCFWRSLDVITLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...AGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATTCCACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: SLDQLILGGHPVLSFSHSTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...GGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567042.1
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: SSTMKATSYISFSCPLVMALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACACTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS CCA 90 bp TCTGCACTTTGTCTCCTCTACCCTTTGAACAATCAGTTGGAGAGGTaGGCAGTCAGTTCTCACCATTGGGTCAGTGGGTCACACACACTC +
Preference number: 5 (lower is better)
Translates to: SALCLLYPLNNQLER*AVSSHHWVSGSHTL
Trigger: GAGTGTGTGTGACCCACTGACCCAATGGTGAGAACTGACTGCCCACCTCTCCAACTGATTGTTCAAAGGGTAGAGGAGACAAAGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS-3UTR CAA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGTTCCAGAACTGGCCTTaGATGTCCATTGGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRFQNWP*MSIGSV
Trigger: CACTGACCCAATGGACATCAAAGGCCAGTTCTGGAA...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGTAACAGGATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QLLYLNTFMRADGSWGNRMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...CCTGTTACCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGTTCTCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FGVGCIDQPIAQDRMPVLSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...GAGAACTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CAA 90 bp AAAGGAAATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: KGNTGDGAQVDAFAIGCSSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...GGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTACCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: VKGKVRGWSQSGPSECGVPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...TACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: LRAASAAVPEHFYEGRWIPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...GATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCCCATCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: VSLDQLILGGHPVLSFSHPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...ATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SSTMKATSYISFSCPLVMLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACTTCACATTAAAGGCCAGAGTCTaGGGATCAGTGGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: AHPDVPMLLEVLRCNHFTLKARV*GSVGST
Trigger: GGTGGACCCCACTGATCCCAAGACTCTGGCCTTTAA...TGTGAAGTGATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TCGGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: SDTGHTQMFPCFWRSLDVTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...TACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCCACCTCACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: AIRMWSSSWVKLYHEGHLTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...GAGGTGGCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGGATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: AASAAVPEHFYEGRWILGMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...CCCCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: SSTMKATSYISFSCPLVMWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS TCA 90 bp AATGTGGGACCCACTGTAAGGCAGGGTAGAATACATGTCTCCTTATaGTATGAGGTTCCCAGGAACACTCCCAAGACTGCCATTCCCACC +
Preference number: 5 (lower is better)
Translates to: NVGPTVRQGRIHVSL*YEVPRNTPKTAIPT
Trigger: GGTGGGAATGGCAGTCTTGGGAGTGTTCCTGGGAACCTCATATCATAAGGAGACATGTATTCTACCCTGCCTTACAGTGGGTCCCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568213.1
ENST00000569972.5
CDS-3UTR CAA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTTCCAGAACTGGCCTTaGATGTCCATTGGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGFQNWP*MSIGSV
Trigger: CACTGACCCAATGGACATCAAAGGCCAGTTCTGGAA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000565443.5
ENST00000567440.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: QGMESVWAIRMWSSSWVKQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...CTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: GMESVWAIRMWSSSWVKLAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...GAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: SSTMKATSYISFSCPLVMGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVITMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp ATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: MESVWAIRMWSSSWVKLYLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...GTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: LFPFLQFGVGCIDQPIAQLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...CTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR CAA 90 bp CTGTTGTATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTGCTGTCCTTTTCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: LLYLWTSSSLEGILCCPFLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...AAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATACAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567042.1
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGAAGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: LHKVLYSLDSDSAGTVTEALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...TTCAGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: DHTHDFLLYLGVLSINVGWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...GCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCATGAAGGCATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VWAIRMWSSSWVKLYHEGMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...GCCTTCATGGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SGQPQLLYLNTFMRADGSMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...GGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TATGTGCTCCAAATACAGCACTCGGGAACAAGACTCCTGGCCTACATGACAAATGTCCAGCTAGACATGTaGTTGGCAGGTACTAGCCCC +
Preference number: 5 (lower is better)
Translates to: YVLQIQHSGTRLLAYMTNVQLDM*LAGTSP
Trigger: GGGGCTAGTACCTGCCAACAACATGTCTAGCTGGAC...ATTTGTCATGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTTGGAGCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS TCA 90 bp GTTACCTCCCGCTGGGTCCCTTCCACAACACATGGGAATTCAAGATaGGATCTGGGTGGAGACACAGCCAAACCGTATCATATAGTGATA +
Preference number: 5 (lower is better)
Translates to: VTSRWVPSTTHGNSR*DLGGDTAKPYHIVI
Trigger: TATCACTATATGATACGGTTTGGCTGTGTCTCCACCCAGATCTCATCTTGAATTCCCATGTGTTGTGGAAGGGACCCAGCGGGAGGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 90 bp TTAATGGACTTACAGTTCCACATGGCTGGGGAGGCCTCACAATCATaGTGGAAGGCAAGGAGGAGCAAGTCACATCTTAAATGGATGGTG +
Preference number: 5 (lower is better)
Translates to: LMDLQFHMAGEASQS*WKARRSKSHLKWMV
Trigger: CACCATCCATTTAAGATGTGACTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS-3UTR CAA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCTCTACCGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: WSQSGPSECGVVLGSSSTAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...GGTAGAGCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTGCGCAGGATCGAATGCCAGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: LQFGVGCIDQPIAQDRMPAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...TGGCATTCGATCCTGCGCAATGGGCTGGTCAATGCATCCTACACCAAACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: KVRGWSQSGPSECGVVLGAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...CCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAAGCAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RGWSQSGPSECGVVLGSSSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...GCTTGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GQPQLLYLNTFMRADGSWSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...CCAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: LYHEGHLLHILFLPLGNGTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...GCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GCTGTCCTTTTCCCATTCCTGCAGTTTGGTGTAGGATGCATTGACCAGCCCATTACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: AVLFPFLQFGVGCIDQPITMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...AATGGGCTGGTCAATGCATCCTACACCAAACTGCAGGAATGGGAAAAGGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567440.5
ENST00000569890.1
CDS-3UTR CAA 90 bp TCCGATCACACGCATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTTGGACCAGCTCATCCTaGGAGGGCATCCTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: SDHTHDFLLYLGVLSINVWTSSS*EGILCC
Trigger: ACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCA...AACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATGCGTGTGATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AAAGGAAATACTGGAGATGGGGCTCAGGTAGATGCCTTTGCCATAGGCTGCTCCATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KGNTGDGAQVDAFAIGCSMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...GGAGCAGCCTATGGCAAAGGCATCTACCTGAGCCCCATCTCCAGTATTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567042.1
ENST00000616176.4
CDS TCA 90 bp ATGTGCTCCAAATACAGCACTCGGGAACAAGACTCCTGGCCTACATaGCAAATTCCACAAGTCCAGCTAGACATGTTGTTGGCAGGTACT +
Preference number: 5 (lower is better)
Translates to: MCSKYSTREQDSWPT*QIPQVQLDMLLAGT
Trigger: AGTACCTGCCAACAACATGTCTAGCTGGACTTGTGGAATTTGTCATGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTTGGAGCACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS GCA 90 bp GACGGCAGCGTTAGGCCAGAAGTGCCAACTTTTCACGGTCTTTGTTaGTGCAGAAGTCAAGAAAAATTTAGCCTCTTTCCAAGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: DGSVRPEVPTFHGLC*CRSQEKFSLFPRAV
Trigger: AACAGCCCTTGGAAAGAGGCTAAATTTTTCTTGACTTCTGCAGCAACAAAGACCGTGAAAAGTTGGCACTTCTGGCCTAACGCTGCCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000566844.1
ENST00000567633.1
ENST00000569795.6
CDS CCA 90 bp TGGCAGGTACTAGCCCCACTTACATCGAGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCATCGATAGTTCCATATTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: WQVLAPLTSRKLMLM*RSMSTSSIVPYSLM
Trigger: CATCAGAGAATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGTAAGTGGGGCTAGTACCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS CCA 90 bp TTTATACAGGAAAAAGGGTTTAATGGACTTACAGTTCCACATGGCTaGGGAGGCCTCACAATCATGGTGGAAGGCAAGGAGGAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: FIQEKGFNGLTVPHG*GGLTIMVEGKEEQV
Trigger: GACTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCATTAAACCCTTTTTCCTGTATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS-3UTR CAA 90 bp CATGATTTCCTTCTGTATCTTGGGGTCCTGAGTATTAATGTTGGCATCGCCCACTTCCAGAACTGGCCTTaGATGTCCATTGGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: HDFLLYLGVLSINVGIAHFQNWP*MSIGSV
Trigger: CACTGACCCAATGGACATCAAAGGCCAGTTCTGGAA...GTGGGCGATGCCAACATTAATACTCAGGACCCCAAGATACAGAAGGAAATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATCCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: DTGHTQMFPCFWRSLDVIQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...GATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GATTCCTCAGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: DSSGQPQLLYLNTFMRADQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...ATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCTGAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGGTCAGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: VRGWSQSGPSECGVVLGSVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...TGACCCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATCTTGGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: VCVNLSSDHTHDFLLYLGPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...CCCAAGATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp GAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTCTTGGAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: ESQGMESVWAIRMWSSSWSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...CCAAGAACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTTGGGGCCCCCTCAGTTaGTGTAAACCTGAGTTCCGA +
Preference number: 5 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSWGPLS*CKPEFR
Trigger: TCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCA...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 90 bp TTCCAGGCTGTAGAGACTTCCTCATCGAGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCATCGATAGTTCCATATTCTCTGATG +
Preference number: 5 (lower is better)
Translates to: FQAVETSSSRKLMLM*RSMSTSSIVPYSLM
Trigger: CATCAGAGAATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGAGGAAGTCTCTACAGCCTGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 90 bp CTGGGTCCCTTCCACAACACATGGGAATTCAAGATGAGATCTGGGTaGAGACACAGCCAAACCGTATCATATAGTGATAACAACAATGGC +
Preference number: 5 (lower is better)
Translates to: LGPFHNTWEFKMRSG*RHSQTVSYSDNNNG
Trigger: GCCATTGTTGTTATCACTATATGATACGGTTTGGCTGTGTCTCCACCCAGATCTCATCTTGAATTCCCATGTGTTGTGGAAGGGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS-3UTR CAA 90 bp ATTTCCAAATATGAGCCCTGGGTCATCTCCCGAATAGACATCACACTATCCAGATTCCAGAACTGGCCTTaGATGTCCATTGGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: ISKYEPWVISRIDITLSRFQNWP*MSIGSV
Trigger: CACTGACCCAATGGACATCAAAGGCCAGTTCTGGAA...TCTGGATAGTGTGATGTCTATTCGGGAGATGACCCAGGGCTCATATTTGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CAA 90 bp TCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: STMKATSYISFSCPLVMAQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...GGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGGGCAGCCTCAGCTGCTGTACCTGAACACTTTTATGAGGGCAGATGGATCCTGGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: RAASAAVPEHFYEGRWILVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...CAGGATCCATCTGCCCTCATAAAAGTGTTCAGGTACAGCAGCTGAGGCTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CCAAATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCAATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PNPSLFDGWKTSMDGSGPMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...TGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CAAATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: QILPYLMAGKPQWMVLVHPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...ATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTGGGAAACTGGGAGACTaGGGGATGGGTGAAAAGATG +
Preference number: 5 (lower is better)
Translates to: NPSLFDGWKTSMDGSGPSGKLGD*GMGEKM
Trigger: CATCTTTTCACCCATCCCCAAGTCTCCCAGTTTCCC...AGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATCCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGGCCCCAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: YHEGHLLHILFLPLGNGPSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...GGGGCCATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATACAGCACTCGGGAACAAGACTCCTGGCCTACATGACAAATTCCACAAGTCCAGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: IQHSGTRLLAYMTNSTSPAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...TGGACTTGTGGAATTTGTCATGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp GGACACAGGGCACACCCAGATGTTCCCATGCTTCTGGAGGTCCTTAGATGTAATGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: GHRAHPDVPMLLEVLRCNVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...ATTACATCTAAGGACCTCCAGAAGCATGGGAACATCTGGGTGTGCCCTGTGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CGCCCAGTGTGTAGAAGGAGAAAACGCATAGTTCACGAGTACAGACAGCTGGCTGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: RPVCRRRKRIVHEYRQLAVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...AGCCAGCTGTCTGTACTCGTGAACTATGCGTTTTCTCCTTCTACACACTGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567440.5
CDS-3UTR CAA 90 bp AAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGGCCATCCGAATGTGGAGTAGTTGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: KGKVRGWSQSGPSECGVVVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...AACTACTCCACATTCGGATGGCCCAGACTGACTCCATCCCCTGACTTTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTATGGTACCACTTGCCTaGAACCAACTGTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSMVPLA*NQLCLF
Trigger: GAAGAGGCACAGTTGGTTCAAGGCAAGTGGTACCAT...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGGTACACCTAGTTaGCCTTTCAGCATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQSGTPS*PFSMES
Trigger: GGACTCCATGCTGAAAGGCAAACTAGGTGTACCAGA...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCACCAAACACTTCCACTTaGGGGTTCTTCATGGTACAG +
Preference number: 5 (lower is better)
Translates to: NVGIAHLTILIYKEESCAPNTST*GFFMVQ
Trigger: CTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGG...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp AATGTTGGCATCGCCCACCTGACCATCCTCATATACAAAGAAGAATCTTGTGCAACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: NVGIAHLTILIYKEESCATMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...TGCACAAGATTCTTCTTTGTATATGAGGATGGTCAGGTGGGCGATGCCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGCATTGACCAGCCCATaGCGCAGGATCGAATGCCAG +
Preference number: 5 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGALTSP*RRIECQ
Trigger: CTGGCATTCGATCCTGCGCAATGGGCTGGTCAATGC...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 90 bp GAAGACATGCTGCTCATCACACACCACACAGTACTCATTCAATGTTaGAATCCTCTGTTCTGCATACTTCATGATCTGAACGAGGAATCC +
Preference number: 5 (lower is better)
Translates to: EDMLLITHHTVLIQC*NPLFCILHDLNEES
Trigger: GGATTCCTCGTTCAGATCATGAAGTATGCAGAACAGAGGATTCCAACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAGCATGTCTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SSTMKATSYISFSCPLVMSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...CATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTG +
Preference number: 5 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSLLRGS*TMCDLL
Trigger: CAACAGGTCACACATTGTCAAACTACCTCTCAGCAG...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp CCCTCAGTTTGTGTAAACCTGAGTTCCGATCACACGCATGATTTCCTTCTGTATATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PSVCVNLSSDHTHDFLLYMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...ATACAGAAGGAAATCATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp ATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: ITSQSAIQFRFRLCRNRDMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...GTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567263.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGCTTGGTAATGGCCCCTaGATTCCTCAGGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRLGNGP*IPQGSL
Trigger: GAGGCTGCCCTGAGGAATCAAGGGGCCATTACCAAG...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 90 bp GAAATGCAAATGACTTCAATGTCAAGGTTGACTCCTAAGCATATCTaGGTTCCAGTACAAGCTGGCCTCTTCCAGGATCATTACCTAAGA +
Preference number: 5 (lower is better)
Translates to: EMQMTSMSRLTPKHI*VPVQAGLFQDHYLR
Trigger: TCTTAGGTAATGATCCTGGAAGAGGCCAGCTTGTACTGGAACCCAGATATGCTTAGGAGTCAACCTTGACATTGAAGTCATTTGCATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CCA 90 bp AGGATATCATGCTTTGTTAGGTCCCTATTATCCCATGGAAAGGCGTaGGATGATATGGTGAGGAACAGATTCCCACAAAGATTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: RISCFVRSLLSHGKA*DDMVRNRFPQRLGN
Trigger: ATTTCCCAATCTTTGTGGGAATCTGTTCCTCACCATATCATCCCACGCCTTTCCATGGGATAATAGGGACCTAACAAAGCATGATATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413097.6
ENST00000544520.5
CDS-3UTR CAA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCACAATGTGTGACCTGTaGCTAGAGATGATCCACTGC +
Preference number: 5 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVTMCDL*LEMIHC
Trigger: GCAGTGGATCATCTCTAGCAACAGGTCACACATTGT...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp GTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGTATGGTATTCATCCTGTaGTATCTCTGGACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: VLFTNRVKSKGKSGDGVSMVFIL*YLWTSS
Trigger: TGAGCTGGTCCAGAGATACAACAGGATGAATACCAT...ACTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAGCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: CFIYKQGEVKGKVRGWSQQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...CTGACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp AATCCTTCCTTATTTGATGGCTGGAAAACCTCAATGGATGGTTCTGGTCCATCTCAGATGTTTCCATTGTaGGGATGTAAACATACCCAG +
Preference number: 5 (lower is better)
Translates to: NPSLFDGWKTSMDGSGPSQMFPL*GCKHTQ
Trigger: CTGGGTATGTTTACATCCCAACAATGGAAACATCTG...AGATGGACCAGAACCATCCATTGAGGTTTTCCAGCCATCAAATAAGGAAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp AAGCTCTACCATGAAGGCCACCTCTTACATATCCTTTTCCTGCCCCTTGGTAATGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: KLYHEGHLLHILFLPLGNVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...ATTACCAAGGGGCAGGAAAAGGATATGTAAGAGGTGGCCTTCATGGTAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp ATGAAGAATATGTGCTCCAAATACAGCACTCGGGAACAAGACTCCTGGCCTACAGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: MKNMCSKYSTREQDSWPTVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...TGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTTGGAGCACATATTCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS-3UTR CAA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGCCAGCTCGGAACTTCTaGATGGTACCACTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRPARNF*MVPLAL
Trigger: CAAGGCAAGTGGTACCATCAAGAAGTTCCGAGCTGG...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569795.6
ENST00000616176.4
CDS TCA 90 bp TTTACACCTTTCATGTCACCCTTTGTGAGAGTCTCAGTCTCTTCCTaGTATGATCATATCCATAAACTAGCTCTTAGTGGGACAGAGGAA +
Preference number: 5 (lower is better)
Translates to: FTPFMSPFVRVSVSS*YDHIHKLALSGTEE
Trigger: TTCCTCTGTCCCACTAAGAGCTAGTTTATGGATATGATCATATCAGGAAGAGACTGAGACTCTCACAAAGGGTGACATGAAAGGTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS TCA 90 bp TATTTCAACCTGAACTTTATAGCCAAGTCACTGGAACTAGATATATaGACGCTATTTACACCAACCCTCACTTCCAGAGGGCACTCAATG +
Preference number: 5 (lower is better)
Translates to: YFNLNFIAKSLELDI*TLFTPTLTSRGHSM
Trigger: CATTGAGTGCCCTCTGGAAGTGAGGGTTGGTGTAAATAGCGTTCATATATCTAGTTCCAGTGACTTGGCTATAAAGTTCAGGTTGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS-3UTR CAA 90 bp TCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGGAACCGTGACTGTCTTCAAGAAATCATaGCTCAGATGTTTCCATTGT +
Preference number: 5 (lower is better)
Translates to: SLHKVLYSLDSDSAGTVTVFKKS*LRCFHC
Trigger: ACAATGGAAACATCTGAGCAATGATTTCTTGAAGAC...AGTCACGGTTCCTGCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp ATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGTCAACTTTTCACGGTCTTaGTTGCTGCAGAAGTCAAGA +
Preference number: 5 (lower is better)
Translates to: IVLFTNRVKSKGKSGDGVNFSRS*LLQKSR
Trigger: TCTTGACTTCTGCAGCAACAAAGACCGTGAAAAGTT...GACTCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR CAA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGATCTTTCCAAGGGCTGTaGCTGCTTGGTTTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGSFQGL*LLGFCC
Trigger: ACAACAGAAACCAAGCAGCAACAGCCCTTGGAAAGA...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569795.6
CDS CCA 90 bp AGAAAACCAGAGCAGAATAGCGTAGAAGAAAACATACAAGACAGTTaGTCAAATGCTGGAGTAACTACAGTAAGTGGAACATTTGCACAC +
Preference number: 5 (lower is better)
Translates to: RKPEQNSVEENIQDS*SNAGVTTVSGTFAH
Trigger: GTGTGCAAATGTTCCACTTACTGTAGTTACTCCAGCATTTGACCAACTGTCTTGTATGTTTTCTTCTACGCTATTCTGCTCTGGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 90 bp TTAGATATGAAAATGTGCTTGTGTGCTCCCACTCCTCACTCTTTTTaGTTTGAGGATAGGACGTTAAGTCTCTGTACTCAGCTTTATCAT +
Preference number: 5 (lower is better)
Translates to: LDMKMCLCAPTPHSF*FEDRTLSLCTQLYH
Trigger: ATGATAAAGCTGAGTACAGAGACTTAACGTCCTATCCTCAAACCAAAAAGAGTGAGGAGTGGGAGCACACAAGCACATTTTCATATCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 90 bp AAACATACAAGACAGTTGGTCAAATGCTGGAGTAACTACAGTAAGTaGAACATTTGCACACATTTCCCCCAACATCCCATTATACATACT +
Preference number: 5 (lower is better)
Translates to: KHTRQLVKCWSNYSK*NICTHFPQHPIIHT
Trigger: AGTATGTATAATGGGATGTTGGGGGAAATGTGTGCAAATGTTCCACTTACTGTAGTTACTCCAGCATTTGACCAACTGTCTTGTATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS-3UTR CAA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAGCTCAGATGTTTCCATaGTTGGGATGTAAACATACC +
Preference number: 5 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGAQMFP*LGCKHT
Trigger: GGTATGTTTACATCCCAACAATGGAAACATCTGAGC...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000564610.5
ENST00000565443.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS-3UTR CAA 90 bp TCCTTAGATGTAATCACTTCACAAAGTGCTATACAGTTTAGATTCCGACTCTGCAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SLDVITSQSAIQFRFRLCSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...GCAGAGTCGGAATCTAAACTGTATAGCACTTTGTGAAGTGATTACATCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000616176.4
CDS-3UTR CAA 90 bp TTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGGGATGGAAACTTTTCACGGTCTTaGTTGCTGCAGAAGTCAAGA +
Preference number: 5 (lower is better)
Translates to: FIVLFTNRVKSKGKSGDGNFSRS*LLQKSR
Trigger: TCTTGACTTCTGCAGCAACAAAGACCGTGAAAAGTT...TCCATCCCCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287196.13
ENST00000569795.6
CDS-3UTR CAA 90 bp CTTCCATTTTATTGTTTTATTTACAAACAGGGTGAAGTCAAAGGGAAAGTCAGGAGTACTCATTCAATGTaGGAATCCTCTGTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LPFYCFIYKQGEVKGKVRSTHSM*ESSVLH
Trigger: ATGCAGAACAGAGGATTCCAACATTGAATGAGTACT...CCTGACTTTCCCTTTGACTTCACCCTGTTTGTAAATAAAACAATAAAATGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000569795.6
ENST00000616176.4
CDS GCA 72 bp CCCGCACCCTTCCCGTGGCCCGGCCGCACCGCCCTGTaGCCGTGGTGGCGGCCACACAGGCCAGCCTGGCGA +
Preference number: 6 (lower is better)
Translates to: PAPFPWPGRTAL*PWWRPHRPAWR
Trigger: TCGCCAGGCTGGCCTGTGTGGCCGCCACCACGGGCACAGGGCGGTGCGGCCGGGCCACGGGAAGGGTGCGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566844.1
ENST00000567633.1
ENST00000569795.6
CDS CCA 72 bp GCCCTGTGCCCGTGGTGGCGGCCACACAGGCCAGCCTaGCGAGTACTCACGGCGACCCCGGGCCGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: ALCPWWRPHRPA*RVLTATPGRAR
Trigger: CCGCGCGCGGCCCGGGGTCGCCGTGAGTACTCGCCAGGCTGGCCTGTGTGGCCGCCACCACGGGCACAGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566844.1
ENST00000569795.6
CDS CCA 72 bp TTCCCGTGGCCCGGCCGCACCGCCCTGTGCCCGTGGTaGCGGCCACACAGGCCAGCCTGGCGAGTACTCACG +
Preference number: 6 (lower is better)
Translates to: FPWPGRTALCPW*RPHRPAWRVLT
Trigger: CGTGAGTACTCGCCAGGCTGGCCTGTGTGGCCGCCACCACGGGCACAGGGCGGTGCGGCCGGGCCACGGGAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566844.1
ENST00000569795.6
CDS TCA 72 bp GGGCCCGATCTATGCCGCCCGGCCGCCGGGCCTGAGTaGAGCCTGTCCAGCCTAGGAGGGGCCCTCAGAACC +
Preference number: 6 (lower is better)
Translates to: GPDLCRPAAGPE*SLSSLGGALRT
Trigger: GGTTCTGAGGGCCCCTCCTAGGCTGGACAGGCTTCACTCAGGCCCGGCGGCCGGGCGGCATAGATCGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566844.1
CDS CAA 72 bp GTGGTTGGGAGGAACAAGCAGGAAGGGCAACCCAGGTaGCCTGTAGGCCGGGAGGGAGTCCCCTCGCCGGAG +
Preference number: 6 (lower is better)
Translates to: VVGRNKQEGQPR*PVGREGVPSPE
Trigger: CTCCGGCGAGGGGACTCCCTCCCGGCCTACAGGCAACCTGGGTTGCCCTTCCTGCTTGTTCCTCCCAACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568360.5
CDS CCA 72 bp GCCTCCTTGGCAGGAGGGCTGCTCAGCAGGAGGAACTaGTGTGAGGTGTGCATGAACTTCAGCCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: ASLAGGLLSRRN*CEVCMNFSLLR
Trigger: TCTCAGCAGGCTGAAGTTCATGCACACCTCACACCAGTTCCTCCTGCTGAGCAGCCCTCCTGCCAAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000544520.5
ENST00000564610.5
ENST00000569795.6
CDS TCA 72 bp GGAGACAAGGTAGGGCACGATGTCAGGGACAACTGGTaGTCTGTTGGGGATGGCAGGCTCTGCTGTTGCGGT +
Preference number: 6 (lower is better)
Translates to: GDKVGHDVRDNW*SVGDGRLCCCG
Trigger: ACCGCAACAGCAGAGCCTGCCATCCCCAACAGATCACCAGTTGTCCCTGACATCGTGCCCTACCTTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287196.13
ENST00000565443.5
ENST00000566844.1
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
CDS CCA 72 bp GGAGAGGTGGGCAGTCAGTTCTCACCATTGGGTCAGTaGGTCACACACACTCTCAGGTCAGTGCTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: GEVGSQFSPLGQ*VTHTLRSVLGS
Trigger: GCTGCCTAGCACTGACCTGAGAGTGTGTGTGACCCACTGACCCAATGGTGAGAACTGACTGCCCACCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CCA 72 bp GATCTCCTTCACGGCTTCAATGTCTGCATCAAGCTGTaGGTGTCGATACAGGTCAGCTGCACAGCTCCCCTG +
Preference number: 6 (lower is better)
Translates to: DLLHGFNVCIKL*VSIQVSCTAPL
Trigger: CAGGGGAGCTGTGCAGCTGACCTGTATCGACACCCACAGCTTGATGCAGACATTGAAGCCGTGAAGGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000565443.5
ENST00000565999.5
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp CCTGGGGGCTGGGAGGGTAGCCAAACACTTCCACTTTaGGGTTCTTCATGGTACAGGAGATGGAACGGTTCA +
Preference number: 6 (lower is better)
Translates to: PGGWEGSQTLPL*GSSWYRRWNGS
Trigger: TGAACCGTTCCATCTCCTGTACCATGAAGAACCCCAAAGTGGAAGTGTTTGGCTACCCTCCCAGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569173.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp AAACAGTCAAGTGTTGCATTTAGCGCCCCGAGTGGTTaGGAGGAACAAGCAGGAAGGGCAACCCAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: KQSSVAFSAPSG*EEQAGRATQVA
Trigger: GGCAACCTGGGTTGCCCTTCCTGCTTGTTCCTCCCAACCACTCGGGGCGCTAAATGCAACACTTGACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568360.5
CDS CAA 90 bp CCCTTTGAACAATCAGTTGGAGAGGTGGGCAGTCAGTTCTCACCATaGGGTCAGTGGGTCACACACACTCTCAGGTCAGTGCTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: PFEQSVGEVGSQFSP*GQWVTHTLRSVLGS
Trigger: GCTGCCTAGCACTGACCTGAGAGTGTGTGTGACCCACTGACCCAATGGTGAGAACTGACTGCCCACCTCTCCAACTGATTGTTCAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS TCA 72 bp TGGGGTTCTTCATGGTACAGGAGATGGAACGGTTCATaGGGCGCCCAACCCGAAGCTCTGGTACACCTAGTT +
Preference number: 6 (lower is better)
Translates to: WGSSWYRRWNGS*GAQPEALVHLV
Trigger: AACTAGGTGTACCAGAGCTTCGGGTTGGGCGCCTCATGAACCGTTCCATCTCCTGTACCATGAAGAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS GCA 72 bp GTGAGGGGTAGGATGACGGCAGCGTTAGGCCAGAAGTaGCAACTTTTCACGGTCTTTGTTGCTGCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: VRGRMTAALGQK*QLFTVFVAAEV
Trigger: GACTTCTGCAGCAACAAAGACCGTGAAAAGTTGGCACTTCTGGCCTAACGCTGCCGTCATCCTACCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000566844.1
ENST00000567633.1
ENST00000569795.6
CDS GCA 72 bp TATCTCTGGACCAGCTCATCCTTGGAGGGCATCCTGTaGTGTCCTTTTCCCATTCCACTGCAGGAGAGGATG +
Preference number: 6 (lower is better)
Translates to: YLWTSSSLEGIL*CPFPIPLQERM
Trigger: CATCCTCTCCTGCAGTGGAATGGGAAAAGGACAGCACAGGATGCCCTCCAAGGATGAGCTGGTCCAGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567263.5
CDS TCA 72 bp CGCTGGGTCCCTTCCACAACACATGGGAATTCAAGATaGGATCTGGGTGGAGACACAGCCAAACCGTATCAT +
Preference number: 6 (lower is better)
Translates to: RWVPSTTHGNSR*DLGGDTAKPYH
Trigger: ATGATACGGTTTGGCTGTGTCTCCACCCAGATCTCATCTTGAATTCCCATGTGTTGTGGAAGGGACCCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS GCA 72 bp GTTCTCACTGTAGATCTCCTTCACGGCTTCAATGTCTaGATCAAGCTGTGGGTGTCGATACAGGTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: VLTVDLLHGFNV*IKLWVSIQVSC
Trigger: GCAGCTGACCTGTATCGACACCCACAGCTTGATGCAGACATTGAAGCCGTGAAGGAGATCTACAGTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000565443.5
ENST00000565999.5
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp TGTCTCCTCTACCCTTTGAACAATCAGTTGGAGAGGTaGGCAGTCAGTTCTCACCATTGGGTCAGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: CLLYPLNNQLER*AVSSHHWVSGS
Trigger: TGACCCACTGACCCAATGGTGAGAACTGACTGCCCACCTCTCCAACTGATTGTTCAAAGGGTAGAGGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CCA 72 bp ATCCTCATATCTGAACGAGGAATCCATACTCCAGAGTaGGAATGTTCTTGCAGTGACCACTGCCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: ILISERGIHTPE*ECSCSDHCLGA
Trigger: AGCCCCCAGGCAGTGGTCACTGCAAGAACATTCCCACTCTGGAGTATGGATTCCTCGTTCAGATATGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569173.5
CDS TCA 72 bp CCCACTGTAAGGCAGGGTAGAATACATGTCTCCTTATaGTATGAGGTTCCCAGGAACACTCCCAAGACTGCC +
Preference number: 6 (lower is better)
Translates to: PTVRQGRIHVSL*YEVPRNTPKTA
Trigger: GGCAGTCTTGGGAGTGTTCCTGGGAACCTCATATCATAAGGAGACATGTATTCTACCCTGCCTTACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568213.1
ENST00000569972.5
CDS CCA 72 bp TCATTATCTCCCTCCGAGTCGTCATCATTCCAGAACTaGCCTTTGATGTCCATTGGGTCAGTGGGTCACACA +
Preference number: 6 (lower is better)
Translates to: SLSPSESSSFQN*PLMSIGSVGHT
Trigger: TGTGTGACCCACTGACCCAATGGACATCAAAGGCCAGTTCTGGAATGATGACGACTCGGAGGGAGATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000419739.7
ENST00000565443.5
ENST00000566844.1
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp TTACAGTTCCACATGGCTGGGGAGGCCTCACAATCATaGTGGAAGGCAAGGAGGAGCAAGTCACATCTTAAA +
Preference number: 6 (lower is better)
Translates to: LQFHMAGEASQS*WKARRSKSHLK
Trigger: TTTAAGATGTGACTTGCTCCTCCTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp GAAAAAGGGTTTAATGGACTTACAGTTCCACATGGCTaGGGAGGCCTCACAATCATGGTGGAAGGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: EKGFNGLTVPHG*GGLTIMVEGKE
Trigger: CTCCTTGCCTTCCACCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAAGTCCATTAAACCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS TCA 72 bp TGCACAGCTCCCCTGAACGCCATAGAGAAATTCCTCTaGTTCATTATCTCCCTCCGAGTCGTCATCATTCCA +
Preference number: 6 (lower is better)
Translates to: CTAPLNAIEKFL*FIISLRVVIIP
Trigger: TGGAATGATGACGACTCGGAGGGAGATAATGAATCAGAGGAATTTCTCTATGGCGTTCAGGGGAGCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000565443.5
ENST00000567440.5
ENST00000568360.5
ENST00000569795.6
ENST00000616176.4
CDS GCA 72 bp TCTACGTCTCTATTTCCAGTCCCATCCTCTCTTCGGTaGTTCAGCTACTCCCATCCTAAATCCTCAACTGCT +
Preference number: 6 (lower is better)
Translates to: STSLFPVPSSLR*FSYSHPKSSTA
Trigger: AGCAGTTGAGGATTTAGGATGGGAGTAGCTGAAGCACCGAAGAGAGGATGGGACTGGAAATAGAGACGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568213.1
CDS CAA 72 bp CAGGCTGTAGAGACTTCCTCATCGAGGAAGCTGATGTaGATGTGGAGGTCAATGTCCACGTCATCGATAGTT +
Preference number: 6 (lower is better)
Translates to: QAVETSSSRKLM*MWRSMSTSSIV
Trigger: AACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGAGGAAGTCTCTACAGCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS CAA 72 bp CAGGTACTAGCCCCACTTACATCGAGGAAGCTGATGTaGATGTGGAGGTCAATGTCCACGTCATCGATAGTT +
Preference number: 6 (lower is better)
Translates to: QVLAPLTSRKLM*MWRSMSTSSIV
Trigger: AACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGTAAGTGGGGCTAGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS CAA 72 bp AGTTCTCAATGTGGGACCCACCTGCTGAGAGGTAGTTaGACAATGTGTGACCTGTTGCTAGAGATGATCCTG +
Preference number: 6 (lower is better)
Translates to: SSQCGTHLLRGS*TMCDLLLEMIL
Trigger: CAGGATCATCTCTAGCAACAGGTCACACATTGTCAAACTACCTCTCAGCAGGTGGGTCCCACATTGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566831.5
CDS CAA 90 bp AAATACCAAGAAAGGGTGAGATCTGCACTTTGTCTCCTCTACCCTTaGAACAATCAGTTGGAGAGGTGGGCAGTCAGTTCTCACCATTGG +
Preference number: 6 (lower is better)
Translates to: KYQERVRSALCLLYP*NNQLERWAVSSHHW
Trigger: CCAATGGTGAGAACTGACTGCCCACCTCTCCAACTGATTGTTCAAAGGGTAGAGGAGACAAAGTGCAGATCTCACCCTTTCTTGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CAA 90 bp TGTTGTTGGCAGGTACTAGCCCCACTTACATCGAGGAAGCTGATGTaGATGTGGAGGTCAATGTCCACGTCATCGATAGTTCCATATTCT +
Preference number: 6 (lower is better)
Translates to: CCWQVLAPLTSRKLM*MWRSMSTSSIVPYS
Trigger: AGAATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGTAAGTGGGGCTAGTACCTGCCAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS TCA 72 bp TTACACTCAAGTCTCGTGACAGATTTAGGTAGGGCCTaGACAAAACTCAGGACACCAAGAGCCTCAAGGCTT +
Preference number: 6 (lower is better)
Translates to: LHSSLVTDLGRA*TKLRTPRASRL
Trigger: AAGCCTTGAGGCTCTTGGTGTCCTGAGTTTTGTTCAGGCCCTACCTAAATCTGTCACGAGACTTGAGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp CTAGCCCCACTTACATCGAGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCATCGATAGTTCCATAT +
Preference number: 6 (lower is better)
Translates to: LAPLTSRKLMLM*RSMSTSSIVPY
Trigger: ATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGTAAGTGGGGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS CAA 90 bp CTGGTAGCCAGTAGGAAAGAAATGCAAATGACTTCAATGTCAAGGTaGACTCCTAAGCATATCTGGGTTCCAGTACAAGCTGGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVASRKEMQMTSMSR*TPKHIWVPVQAGLF
Trigger: GAAGAGGCCAGCTTGTACTGGAACCCAGATATGCTTAGGAGTCAACCTTGACATTGAAGTCATTTGCATTTCTTTCCTACTGGCTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS TCA 72 bp AAATACAGCACTCGGGAACAAGACTCCTGGCCTACATaGCAAATTCCACAAGTCCAGCTAGACATGTTGTTG +
Preference number: 6 (lower is better)
Translates to: KYSTREQDSWPT*QIPQVQLDMLL
Trigger: CAACAACATGTCTAGCTGGACTTGTGGAATTTGTCATGTAGGCCAGGAGTCTTGTTCCCGAGTGCTGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565999.5
CDS TCA 72 bp CCAACTCAATCCTGTTGTACACTATCCTTTCCACACTaGTCCAATGATTGTCCATTTCCTGAGCCCAGAACC +
Preference number: 6 (lower is better)
Translates to: PTQSCCTLSFPH*SNDCPFPEPRT
Trigger: GGTTCTGGGCTCAGGAAATGGACAATCATTGGATCAGTGTGGAAAGGATAGTGTACAACAGGATTGAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp GTAGAGACTTCCTCATCGAGGAAGCTGATGTTGATGTaGAGGTCAATGTCCACGTCATCGATAGTTCCATAT +
Preference number: 6 (lower is better)
Translates to: VETSSSRKLMLM*RSMSTSSIVPY
Trigger: ATATGGAACTATCGATGACGTGGACATTGACCTCCACATCAACATCAGCTTCCTCGATGAGGAAGTCTCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp ATGACTTCAATGTCAAGGTTGACTCCTAAGCATATCTaGGTTCCAGTACAAGCTGGCCTCTTCCAGGATCAT +
Preference number: 6 (lower is better)
Translates to: MTSMSRLTPKHI*VPVQAGLFQDH
Trigger: ATGATCCTGGAAGAGGCCAGCTTGTACTGGAACCCAGATATGCTTAGGAGTCAACCTTGACATTGAAGTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CCA 72 bp TGCTTTGTTAGGTCCCTATTATCCCATGGAAAGGCGTaGGATGATATGGTGAGGAACAGATTCCCACAAAGA +
Preference number: 6 (lower is better)
Translates to: CFVRSLLSHGKA*DDMVRNRFPQR
Trigger: TCTTTGTGGGAATCTGTTCCTCACCATATCATCCCACGCCTTTCCATGGGATAATAGGGACCTAACAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413097.6
ENST00000544520.5
CDS CCA 72 bp ATGGATACAGTCACAGGCATGCAAGATGTGTGTGTGTaGTTAAACTCTACGTCTCTATTTCCAGTCCCATCC +
Preference number: 6 (lower is better)
Translates to: MDTVTGMQDVCV*LNSTSLFPVPS
Trigger: GGATGGGACTGGAAATAGAGACGTAGAGTTTAACCACACACACACATCTTGCATGCCTGTGACTGTATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568213.1
CDS CAA 72 bp CCTGAACAAAACTCAGGACACCAAGAGCCTCAAGGCTaGAATTGCCCATTTCTTCCTTTTACAGGACAGGTA +
Preference number: 6 (lower is better)
Translates to: PEQNSGHQEPQG*NCPFLPFTGQV
Trigger: TACCTGTCCTGTAAAAGGAAGAAATGGGCAATTCAAGCCTTGAGGCTCTTGGTGTCCTGAGTTTTGTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp AAAATGTGCTTGTGTGCTCCCACTCCTCACTCTTTTTaGTTTGAGGATAGGACGTTAAGTCTCTGTACTCAG +
Preference number: 6 (lower is better)
Translates to: KMCLCAPTPHSF*FEDRTLSLCTQ
Trigger: CTGAGTACAGAGACTTAACGTCCTATCCTCAAACCAAAAAGAGTGAGGAGTGGGAGCACACAAGCACATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CAA 72 bp GAAGGGAAAATACCAAGAAAGGGTGAGATCTGCACTTaGTCTCCTCTACCCTTTGAACAATCAGTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: EGKIPRKGEICT*SPLPFEQSVGE
Trigger: CTCTCCAACTGATTGTTCAAAGGGTAGAGGAGACAAAGTGCAGATCTCACCCTTTCTTGGTATTTTCCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413097.6
CDS CAA 90 bp TCTCTGGCAGGTCTTAGAGATGGCCCTTATGATATAACCCAAATCTaGTCCCAACTCAATCCTGTTGTACACTATCCTTTCCACACTGAT +
Preference number: 6 (lower is better)
Translates to: SLAGLRDGPYDITQI*SQLNPVVHYPFHTD
Trigger: ATCAGTGTGGAAAGGATAGTGTACAACAGGATTGAGTTGGGACAAGATTTGGGTTATATCATAAGGGCCATCTCTAAGACCTGCCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS TCA 72 bp CTGAACTTTATAGCCAAGTCACTGGAACTAGATATATaGACGCTATTTACACCAACCCTCACTTCCAGAGGG +
Preference number: 6 (lower is better)
Translates to: LNFIAKSLELDI*TLFTPTLTSRG
Trigger: CCCTCTGGAAGTGAGGGTTGGTGTAAATAGCGTTCATATATCTAGTTCCAGTGACTTGGCTATAAAGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS TCA 72 bp ATAGAGAATAGTGAATTGCAGAGGAGTGGTGAGAAATaGTGTAGAAGAGGCAAGCTAGGATCAGATCAAGCC +
Preference number: 6 (lower is better)
Translates to: IENSELQRSGEK*CRRGKLGSDQA
Trigger: GGCTTGATCTGATCCTAGCTTGCCTCTTCTACATCATTTCTCACCACTCCTCTGCAATTCACTATTCTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS GCA 72 bp GTTAGGCCAGAAGTGCCAACTTTTCACGGTCTTTGTTaGTGCAGAAGTCAAGAAAAATTTAGCCTCTTTCCA +
Preference number: 6 (lower is better)
Translates to: VRPEVPTFHGLC*CRSQEKFSLFP
Trigger: TGGAAAGAGGCTAAATTTTTCTTGACTTCTGCAGCAACAAAGACCGTGAAAAGTTGGCACTTCTGGCCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287196.13
ENST00000566844.1
ENST00000567633.1
ENST00000569795.6
CDS CCA 72 bp CTGCTCATCACACACCACACAGTACTCATTCAATGTTaGAATCCTCTGTTCTGCATACTTCATGATCTGAAC +
Preference number: 6 (lower is better)
Translates to: LLITHHTVLIQC*NPLFCILHDLN
Trigger: GTTCAGATCATGAAGTATGCAGAACAGAGGATTCCAACATTGAATGAGTACTGTGTGGTGTGTGATGAGCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000260376.11
ENST00000287196.13
ENST00000413097.6
ENST00000419739.7
ENST00000544520.5
ENST00000564610.5
ENST00000565443.5
ENST00000567440.5
ENST00000567974.5
ENST00000569795.6
ENST00000616176.4
CDS CCA 72 bp TTCCACAACACATGGGAATTCAAGATGAGATCTGGGTaGAGACACAGCCAAACCGTATCATATAGTGATAAC +
Preference number: 6 (lower is better)
Translates to: FHNTWEFKMRSG*RHSQTVSYSDN
Trigger: GTTATCACTATATGATACGGTTTGGCTGTGTCTCCACCCAGATCTCATCTTGAATTCCCATGTGTTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp AGACAGTTGGTCAAATGCTGGAGTAACTACAGTAAGTaGAACATTTGCACACATTTCCCCCAACATCCCATT +
Preference number: 6 (lower is better)
Translates to: RQLVKCWSNYSK*NICTHFPQHPI
Trigger: AATGGGATGTTGGGGGAAATGTGTGCAAATGTTCCACTTACTGTAGTTACTCCAGCATTTGACCAACTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS TCA 72 bp TATAGAACTATCAGATCTCATGAGACTTATTCACTATaGCAAGAACAGCACTGGAAAAACCTGCCCCCATGG +
Preference number: 6 (lower is better)
Translates to: YRTIRSHETYSL*QEQHWKNLPPW
Trigger: CCATGGGGGCAGGTTTTTCCAGTGCTGTTCTTGTCATAGTGAATAAGTCTCATGAGATCTGATAGTTCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CAA 72 bp GGTCTTAGAGATGGCCCTTATGATATAACCCAAATCTaGTCCCAACTCAATCCTGTTGTACACTATCCTTTC +
Preference number: 6 (lower is better)
Translates to: GLRDGPYDITQI*SQLNPVVHYPF
Trigger: GAAAGGATAGTGTACAACAGGATTGAGTTGGGACAAGATTTGGGTTATATCATAAGGGCCATCTCTAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp GAGCAGAATAGCGTAGAAGAAAACATACAAGACAGTTaGTCAAATGCTGGAGTAACTACAGTAAGTGGAACA +
Preference number: 6 (lower is better)
Translates to: EQNSVEENIQDS*SNAGVTTVSGT
Trigger: TGTTCCACTTACTGTAGTTACTCCAGCATTTGACCAACTGTCTTGTATGTTTTCTTCTACGCTATTCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CCA 72 bp CGTAGAAGAAAACATACAAGACAGTTGGTCAAATGCTaGAGTAACTACAGTAAGTGGAACATTTGCACACAT +
Preference number: 6 (lower is better)
Translates to: RRRKHTRQLVKC*SNYSKWNICTH
Trigger: ATGTGTGCAAATGTTCCACTTACTGTAGTTACTCCAGCATTTGACCAACTGTCTTGTATGTTTTCTTCTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS TCA 72 bp ATAATTTTGTACAGGAAATCACAATGGCAACTAACTTaGAGAATCCTACTTCAAACAGTCTTCCCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: IILYRKSQWQLT*RILLQTVFPGL
Trigger: CAAGCCTGGGAAGACTGTTTGAAGTAGGATTCTTCAAGTTAGTTGCCATTGTGATTTCCTGTACAAAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5
CDS CAA 72 bp AATAATTTTGTACAGGAAATCACAATGGCAACTAACTaGAAGAATCCTACTTCAAACAGTCTTCCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: NNFVQEITMATN*KNPTSNSLPRL
Trigger: AAGCCTGGGAAGACTGTTTGAAGTAGGATTCTTCAAGTTAGTTGCCATTGTGATTTCCTGTACAAAATTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566991.5