RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP15 (Homo sapiens)

Ensembl gene IDs: ENSG00000173200

Ensembl transcript IDs: ENST00000310366.8, ENST00000464300.7, ENST00000465304.5, ENST00000483793.5, ENST00000493645.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGAGTGCTGAAAGTGATCAAGCAGAGGCTAGAGGGCTTCTTGCCTaGGAGCAGGGGAGGGTTGGGGGAGAAGGACAAGAGGACAGTGGG +
Preference number: 1 (lower is better)
Translates to: LSAESDQAEARGLLA*EQGRVGGEGQEDSG
Trigger: CCCACTGTCCTCTTGTCCTTCTCCCCCAACCCTCCCCTGCTCCCAGGCAAGAAGCCCTCTAGCCTCTGCTTGATCACTTTCAGCACTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR TCA 90 bp GTGCATTCATTTGCTCATTCACACAGCTTCCAAGATGGCCCCCAATaGTCCTTGCCAGTGGAGTATTCATGCCCTTGTGCAATTCCCTCC +
Preference number: 1 (lower is better)
Translates to: VHSFAHSHSFQDGPQ*SLPVEYSCPCAIPS
Trigger: GGAGGGAATTGCACAAGGGCATGAATACTCCACTGGCAAGGATCATTGGGGGCCATCTTGGAAGCTGTGTGAATGAGCAAATGAATGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CCA 90 bp TATTCTATCTGTGCATTCATTTGCTCATTCACACAGCTTCCAAGATaGCCCCCAATGATCCTTGCCAGTGGAGTATTCATGCCCTTGTGC +
Preference number: 1 (lower is better)
Translates to: YSICAFICSFTQLPR*PPMILASGVFMPLC
Trigger: GCACAAGGGCATGAATACTCCACTGGCAAGGATCATTGGGGGCCATCTTGGAAGCTGTGTGAATGAGCAAATGAATGCACAGATAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTGACCCA +
Preference number: 1 (lower is better)
Translates to: CWWDCKLVQPLWKSV*RFLGDLELEIPFDP
Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CCA 90 bp ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATA +
Preference number: 1 (lower is better)
Translates to: TLLHCWWDCKLVQPL*KSVWRFLGDLELEI
Trigger: TATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTAGAGGGCTTCTTGCCTaGGAGCAGGGGAGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIRGLLA*EQGRVG
Trigger: CCCAACCCTCCCCTGCTCCCAGGCAAGAAGCCCTCT...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR TCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAACCAACTGTTGTGTCATaGGGACACTCAAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEEPTVVS*GHSSSL
Trigger: CAGGCTGCTTGAGTGTCCTCATGACACAACAGTTGG...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGCACTCAAGCAGCCTGTaGAGAGGCCTGAGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: QTPHVLTHRWELNNENTWHSSSL*RGLRGE
Trigger: CTCTCCTCTCAGGCCTCTCCACAGGCTGCTTGAGTG...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR TCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAATGCCTTGCTCTCTCTTaGGTTGCTCACTCTGGAGTA +
Preference number: 2 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEECLALS*VAHSGV
Trigger: TACTCCAGAGTGAGCAACTCAAGAGAGAGCAAGGCA...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR TCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCAAGATGGCCCCCAATaGTCCTTGCCAGTGGAGTAT +
Preference number: 2 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFQDGPQ*SLPVEY
Trigger: ATACTCCACTGGCAAGGATCATTGGGGGCCATCTTG...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR GCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAAAGAGGAACTGAGGACTaGCAATACCTGACAGAAACG +
Preference number: 2 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEERGTED*QYLTET
Trigger: CGTTTCTGTCAGGTATTGGCAGTCCTCAGTTCCTCT...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CAA 90 bp GGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAA +
Preference number: 2 (lower is better)
Translates to: GTLLHCWWDCKLVQP*WKSVWRFLGDLELE
Trigger: TTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR GCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTAGAGGAACTGAGGACTaGCAATACCTGACAGAAACG +
Preference number: 2 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIRGTED*QYLTET
Trigger: CGTTTCTGTCAGGTATTGGCAGTCCTCAGTTCCTCT...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR TCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGTGCCAGGTATGTGAGTaGTTCACCTTGGAAATAGAC +
Preference number: 2 (lower is better)
Translates to: QTPHVLTHRWELNNENTWCQVCE*FTLEID
Trigger: GTCTATTTCCAAGGTGAATCACTCACATACCTGGCA...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR GCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAATCGTGGAAAAGATGGTaGATGACTTCAAACATAAAG +
Preference number: 2 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEESWKRW*MTSNIK
Trigger: CTTTATGTTTGAAGTCATGCACCATCTTTTCCACGA...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR GCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCATCTGTGCATTCATTTaGTCATTCACACAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFICAFI*SFTQLP
Trigger: TGGAAGCTGTGTGAATGAGCAAATGAATGCACAGAT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGTCAACAGGATACTCGTaGAAAAGATGGTGCATGACT +
Preference number: 2 (lower is better)
Translates to: QTPHVLTHRWELNNENTWSTGYS*KRWCMT
Trigger: AGTCATGCACCATCTTTTCCACGAGTATCCTGTTGA...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTGCAGCACACCAACATaGCACATGTTTACATATGTA +
Preference number: 2 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTICSTPT*HMFTYV
Trigger: TACATATGTAAACATGTGCCATGTTGGTGTGCTGCA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CAA 90 bp GGGAAACTTTCATCTGCTTACACAGGCCAGAAGCAAAGACAAAGATaGCATGTTGTTCTTACAGATGACTTAAATCATCTCTTTGATGAT +
Preference number: 2 (lower is better)
Translates to: GKLSSAYTGQKQRQR*HVVLTDDLNHLFDD
Trigger: ATCATCAAAGAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGATGAAAGTTTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR TCA 72 bp TCCAGCCCAGACAAGCCTTCAAACGACCACATCCCCTaGCATCTTGTCTGTAACTTCAGAGAGACCCTAGCA +
Preference number: 3 (lower is better)
Translates to: SSPDKPSNDHIP*HLVCNFRETLA
Trigger: TGCTAGGGTCTCTCTGAAGTTACAGACAAGATGTCAGGGGATGTGGTCGTTTGAAGGCTTGTCTGGGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CAA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCGGAGTAAGCCAACTGTaGTGTCATGAGGACACTCAA +
Preference number: 3 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFGVSQL*CHEDTQ
Trigger: TTGAGTGTCCTCATGACACAACAGTTGGCTTACTCC...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CCA 72 bp TGTGCATTCATTTGCTCATTCACACAGCTTCCAAGATaGCCCCCAATGATCCTTGCCAGTGGAGTATTCATG +
Preference number: 3 (lower is better)
Translates to: CAFICSFTQLPR*PPMILASGVFM
Trigger: CATGAATACTCCACTGGCAAGGATCATTGGGGGCCATCTTGGAAGCTGTGTGAATGAGCAAATGAATGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CAA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCGGTTCCCTGAAGATGTaGAGTGCTGAAAGTGATCAA +
Preference number: 3 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFGSLKM*SAESDQ
Trigger: TTGATCACTTTCAGCACTCAACATCTTCAGGGAACC...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR TCA 72 bp GCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTaGCCCAGCAATCCCATTACTGGGTATATACCCAAA +
Preference number: 3 (lower is better)
Translates to: AIPRGSRTRNTI*PSNPITGYIPK
Trigger: TTTGGGTATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CCA 72 bp GACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGCGATTCCTCGGGGATCTAGAACTAGAAATACCA +
Preference number: 3 (lower is better)
Translates to: DCKLVQPLWKSV*RFLGDLELEIP
Trigger: TGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR-3UTR CAA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTATTCTCCTAGAGATTaGGTGTCTGTGAATGGTTGT +
Preference number: 3 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIYSPRD*VSVNGC
Trigger: ACAACCATTCACAGACACCAAATCTCTAGGAGAATA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR GCA 72 bp TTCAGCATTTTGGCACCTAAAAGGGAAACTTTCATCTaGTTACACAGGCCAGAAGCAAAGACAAAGATTGCA +
Preference number: 3 (lower is better)
Translates to: FSILAPKRETFI*LHRPEAKTKIA
Trigger: TGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGATGAAAGTTTCCCTTTTAGGTGCCAAAATGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR GCA 72 bp CCAAAGGATTATAAATCATGCTGCTGTAAAGACACATaGACACGTATGTTTATTGCGGCACTATTCACAATA +
Preference number: 3 (lower is better)
Translates to: PKDYKSCCCKDT*TRMFIAALFTI
Trigger: TATTGTGAATAGTGCCGCAATAAACATACGTGTGCATGTGTCTTTACAGCAGCATGATTTATAATCCTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR TCA 72 bp GTCTGTAACTCTTCAAAAGTGATGCTTCAGGATAAATaGGCTGCTAAGCATTTTAAGAATTTACGTAACTCT +
Preference number: 3 (lower is better)
Translates to: VCNSSKVMLQDK*AAKHFKNLRNS
Trigger: AGAGTTACGTAAATTCTTAAAATGCTTAGCAGCTCATTTATCCTGAAGCATCACTTTTGAAGAGTTACAGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CAA 72 bp ACACTGTCCCACGGCGGAATAGGTTCCCTGAAGATGTaGAGTGCTGAAAGTGATCAAGCAGAGGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: TLSHGGIGSLKM*SAESDQAEARG
Trigger: CCCTCTAGCCTCTGCTTGATCACTTTCAGCACTCAACATCTTCAGGGAACCTATTCCGCCGTGGGACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCGGGGGTCGGAGCCCCTaGACTCAGAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFGGRSP*TQSSGR
Trigger: CCTGCCGCTGCTCTGAGTCCAGGGGCTCCGACCCCC...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCGGCAGGAAGGGGGCCTaGCGCAGCCATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFGRKGA*RSHPQL
Trigger: GAGCTGAGGATGGCTGCGCCAGGCCCCCTTCCTGCC...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGAGAGGGCTTCTTGCCTaGGAGCAGGGGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMRGLLA*EQGRVG
Trigger: CCCAACCCTCCCCTGCTCCCAGGCAAGAAGCCCTCT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGAGAGGGCTTCTTGCCTaGGAGCAGGGGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLRGLLA*EQGRVG
Trigger: CCCAACCCTCCCCTGCTCCCAGGCAAGAAGCCCTCT...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAACAAGATGGCCCCCAATaGTCCTTGCCAGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEEQDGPQ*SLPVEY
Trigger: ATACTCCACTGGCAAGGATCATTGGGGGCCATCTTG...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAAACCTTGGGTATCTCCTaGCATGGGAATCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEETLGIS*HGNPGL
Trigger: AAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGT...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR GCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTCAGCTCGCTGGGACTaGAGTTGCGCCCCACCCAAC +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTSARWD*SCAPPN
Trigger: GTTGGGTGGGGCGCAACTGCAGTCCCAGCGAGCTGA...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAACATTGCTGTCTGGCTTaGAGTAGGTGTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEEHCCLA*SRCPWQ
Trigger: CTGCCAAGGACACCTACTCCAAGCCAGACAGCAATG...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTCACTCAAGCAGCCTGTaGAGAGGCCTGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIHSSSL*RGLRGE
Trigger: CTCTCCTCTCAGGCCTCTCCACAGGCTGCTTGAGTG...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGGGTCCTCCTCCAAGCTaGAGATTCATGGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: QTPHVLTHRWELNNENTWGPPPS*RFMGTL
Trigger: CAGCGTTCCCATGAATCTTCAGCTTGGAGGAGGACC...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTGGTCCTCCTCCAAGCTaGAGATTCATGGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIGPPPS*RFMGTL
Trigger: CAGCGTTCCCATGAATCTTCAGCTTGGAGGAGGACC...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTGGCAGGAAGGGGGCCTaGCGCAGCCATCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFGRKGA*RSHPQL
Trigger: GAGCTGAGGATGGCTGCGCCAGGCCCCCTTCCTGCC...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCCCATCCTCAGCTCGCTaGGACTGCAGTTGCGCCCCA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFPSSAR*DCSCAP
Trigger: TGGGGCGCAACTGCAGTCCCAGCGAGCTGAGGATGG...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483793.5
CDS-3UTR TCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTGGACAGTGGGGTAGGTaGCCTCTAGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIGQWGR*PLASLS
Trigger: TGACAATGATGCTAGAGGTCACCTACCCCACTGTCC...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAATGGAGTAGGTGTCCTTaGCAGAATAACTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEEWSRCP*QNNWHP
Trigger: TGGATGCCAGTTATTCTGCCAAGGACACCTACTCCA...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAACTATTAAAGCCGTGCTaGTTGACATATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEELLKPC*LTYGTE
Trigger: CTCAGTGCCATATGTCAATCAGCACGGCTTTAATAG...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTRSVGL*GFLGGG
Trigger: CCCTCCACCCAAGAATCCTCACAATCCCACAGATCT...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACACCTTGGGTATCTCCTaGCATGGGAATCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDTLGIS*HGNPGL
Trigger: AAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACCTTGGGTATCTCCTaGCATGGGAATCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMTLGIS*HGNPGL
Trigger: AAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR GCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTCATGGAGCACAGCTTTaGAGTCCAGATTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTHGAQL*SPDCSR
Trigger: GCGGCTGCAATCTGGACTGCAAAGCTGTGCTCCATG...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATCATGGAGCACAGCTTTaGAGTCCAGATTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDHGAQL*SPDCSR
Trigger: GCGGCTGCAATCTGGACTGCAAAGCTGTGCTCCATG...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGACACCTGCAACTCCGTaGATAAGTTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLTPATP*ISSLGV
Trigger: GACCCCCAGAGAACTTATGCACGGAGTTGCAGGTGT...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGCCCAACTGTGATAGATaGATAACGGTAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: QTPHVLTHRWELNNENTWPNCDR*ITVAAP
Trigger: TGGAGCGGCTACCGTTATGCATCTATCACAGTTGGG...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGGTATCTCCTGCCATaGGAATCCTGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDGYLLP*ESWPCW
Trigger: CCAACAAGGCCAGGATTCCCATGGCAGGAGATACCC...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACACACAGCTTCCAAGATaGCCCCCAATGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDTQLPR*PPMILA
Trigger: GGCAAGGATCATTGGGGGCCATCTTGGAAGCTGTGT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
3UTR CAA 72 bp TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTA +
Preference number: 4 (lower is better)
Translates to: LHCWWDCKLVQP*WKSVWRFLGDL
Trigger: TAGATCCCCGAGGAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAATCTCCAGTAGCAACCTaGAAAGTAATTGCACCGATT +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEESPVAT*KVIAPI
Trigger: AATCGGTGCAATTACTTTTCAGGTTGCTACTGGAGA...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTCTTGGGTGGAGGGGTaGCTAATCCTGCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNSWVEG*LILHVP
Trigger: AGGGACGTGCAGGATTAGTCACCCCTCCACCCAAGA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTCTTGGGTGGAGGGGTaGCTAATCCTGCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHSWVEG*LILHVP
Trigger: AGGGACGTGCAGGATTAGTCACCCCTCCACCCAAGA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDRSVGL*GFLGGG
Trigger: CCCTCCACCCAAGAATCCTCACAATCCCACAGATCT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGGACAGTGGGGTAGGTaGCCTCTAGCATCATTGTCA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTGQWGR*PLASLS
Trigger: TGACAATGATGCTAGAGGTCACCTACCCCACTGTCC...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCACTGGAAGGGAGACATaGGAAATTGGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFTGRET*EIGSGF
Trigger: AAAACCACTGCCAATTTCTCATGTCTCCCTTCCAGT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATACACCTGCAACTCCGTaGATAAGTTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDTPATP*ISSLGV
Trigger: GACCCCCAGAGAACTTATGCACGGAGTTGCAGGTGT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGCCCAACTGTGATAGATaGATAACGGTAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMPNCDR*ITVAAP
Trigger: TGGAGCGGCTACCGTTATGCATCTATCACAGTTGGG...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTCATTTCCTGTTCCAATaGCTGGAAGGGAAACCGATG +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIHFLFQ*LEGKPM
Trigger: CATCGGTTTCCCTTCCAGCCATTGGAACAGGAAATG...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATTATGGAGCCACAGCATaGAGCACAGCTTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDYGATA*STALQS
Trigger: GGACTGCAAAGCTGTGCTCCATGCTGTGGCTCCATA...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTGGACTGAAAGTTCAGTaGTGCAGAGAGGTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIGLKVQ*CREVSF
Trigger: AAAAGAGACCTCTCTGCATCACTGAACTTTCAGTCC...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR TCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGATTGACATATGGCACTaGGTCTGCATCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMIDIWH*VCICPM
Trigger: CATGGGACAGATGCAGACTCAGTGCCATATGTCAAT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACATTGACATATGGCACTaGGTCTGCATCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDIDIWH*VCICPM
Trigger: CATGGGACAGATGCAGACTCAGTGCCATATGTCAAT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGCTATTAAAGCCGTGCTaGTTGACATATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: QTPHVLTHRWELNNENTWLLKPC*LTYGTE
Trigger: CTCAGTGCCATATGTCAATCAGCACGGCTTTAATAG...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCTCTTGGGTGGAGGGGTaGCTAATCCTGCACGTCCCT +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLSWVEG*LILHVP
Trigger: AGGGACGTGCAGGATTAGTCACCCCTCCACCCAAGA...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCTGTATTGTTTGTCACTaGGTCAAAGAGATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFCIVCH*VKEICG
Trigger: CCCACAGATCTCTTTGACTCAGTGACAAACAATACA...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTGCCAGGTATGTGAGTaGTTCACCTTGGAAATAGAC +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTICQVCE*FTLEID
Trigger: GTCTATTTCCAAGGTGAATCACTCACATACCTGGCA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGACTGGAAGGGAGACATaGGAAATTGGCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QTPHVLTHRWELNNENTWTGRET*EIGSGF
Trigger: AAAACCACTGCCAATTTCTCATGTCTCCCTTCCAGT...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGCGCACAACGTACATGTaGTTTCTCCCATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMRTTYM*FLPLLS
Trigger: AGACAGCAATGGGAGAAAGCACATGTACGTTGTGCG...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGATGGGACCAGCTTTCTaGAAAAATGCCCGAGATAGT +
Preference number: 4 (lower is better)
Translates to: QTPHVLTHRWELNNENTWMGPAF*KNARDS
Trigger: ACTATCTCGGGCATTTTTGCAGAAAGCTGGTCCCAT...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCACAGCTTTGGGAAACTaGAAACTTCCTGTTCCAATC +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFTALGN*KLPVPI
Trigger: GATTGGAACAGGAAGTTTGCAGTTTCCCAAAGCTGT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR GCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTCTGGAAGTAACACCTaGAACTCCGTGCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTISGSNT*NSVHKF
Trigger: GAACTTATGCACGGAGTTGCAGGTGTTACTTCCAGA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACCTGCCATGGGAATCCTaGCCTTGTTGGGATTTATTC +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDLPWES*PCWDLF
Trigger: GAATAAATCCCAACAAGGCCAGGATTCCCATGGCAG...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATGGGTATCTCCTGCCATaGGAATCCTGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHGYLLP*ESWPCW
Trigger: CCAACAAGGCCAGGATTCCCATGGCAGGAGATACCC...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGTGGAGTAGGTGTCCTTaGCAGAATAACTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMWSRCP*QNNWHP
Trigger: TGGATGCCAGTTATTCTGCCAAGGACACCTACTCCA...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTCATCTAACTCTTTCTaGAGCATGGGACCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTISSNSF*SMGPAF
Trigger: GAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATATGGAGCCACAGCATaGAGCACAGCTTTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLYGATA*STALQS
Trigger: GGACTGCAAAGCTGTGCTCCATGCTGTGGCTCCATA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCCACTCAAGCAGCCTGTaGAGAGGCCTGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLHSSSL*RGLRGE
Trigger: CTCTCCTCTCAGGCCTCTCCACAGGCTGCTTGAGTG...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAACACAGCTTCCAAGATaGCCCCCAATGATCCTTGCC +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLTQLPR*PPMILA
Trigger: GGCAAGGATCATTGGGGGCCATCTTGGAAGCTGTGT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCGGAGACATGAGAAATTaGCAGTGGTTTTCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFGDMRN*QWFSLS
Trigger: ACTAAGGGAAAACCACTGCCAATTTCTCATGTCTCC...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACGGAAGCAACAGGTGCTaGAGAGGATGTGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDGSNRC*RGCGEI
Trigger: TATTTCTCCACATCCTCTCCAGCACCTGTTGCTTCC...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCAACCCCATCAAAAAGTaGGCAAAGGATATGAACGGA +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFNPIKK*AKDMNG
Trigger: TCCGTTCATATCCTTTGCCCACTTTTTGATGGGGTT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACACCTGTTCCAATGGCTaGAAGGGAAACCGATGTGTA +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDTCSNG*KGNRCV
Trigger: TACACATCGGTTTCCCTTCCAGCCATTGGAACAGGT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGGACTGAAAGTTCAGTaGTGCAGAGAGGTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMGLKVQ*CREVSF
Trigger: AAAAGAGACCTCTCTGCATCACTGAACTTTCAGTCC...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310366.8
ENST00000464300.7
CDS-3UTR TCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGATGGAGAATGTGGACTaGAAGTTCAGTGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLMENVD*KFSDAE
Trigger: CTCTGCATCACTGAACTTTCAGTCCACATTCTCCAT...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNRSVGL*GFLGGG
Trigger: CCCTCCACCCAAGAATCCTCACAATCCCACAGATCT...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCCAACTGTTGTGTCATaGGGACACTCAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHPTVVS*GHSSSL
Trigger: CAGGCTGCTTGAGTGTCCTCATGACACAACAGTTGG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTGCCTTGCTCTCTCTTaGGTTGCTCACTCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFCLALS*VAHSGV
Trigger: TACTCCAGAGTGAGCAACTCAAGAGAGAGCAAGGCA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGCTCACAGGTGGGAATTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLLTGGN*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAATTCCCACCTGTGAG...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCGCTCTAGCTGGACCATaGAAAACAGCTGATGATTCA +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTALAGP*KTADDS
Trigger: TGAATCATCAGCTGTTTTGCATGGTCCAGCTAGAGC...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAATCTTCTCTATTaGGTAGGAAGAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFLNLLY*VGRTSS
Trigger: CGAACTTGTTCTTCCTACGCAATAGAGAAGATTGAG...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATCGCACAACGTACATGTaGTTTCTCCCATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDRTTYM*FLPLLS
Trigger: AGACAGCAATGGGAGAAAGCACATGTACGTTGTGCG...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTCGCACAACGTACATGTaGTTTCTCCCATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTRTTYM*FLPLLS
Trigger: AGACAGCAATGGGAGAAAGCACATGTACGTTGTGCG...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACATGGGACCAGCTTTCTaGAAAAATGCCCGAGATAGT +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDMGPAF*KNARDS
Trigger: ACTATCTCGGGCATTTTTGCAGAAAGCTGGTCCCAT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATAGAGGAACTGAGGACTaGCAATACCTGACAGAAACG +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDRGTED*QYLTET
Trigger: CGTTTCTGTCAGGTATTGGCAGTCCTCAGTTCCTCT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATCTGCCATGGGAATCCTaGCCTTGTTGGGATTTATTC +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDLPWES*PCWDLF
Trigger: GAATAAATCCCAACAAGGCCAGGATTCCCATGGCAG...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTGGGTATCTCCTGCCATaGGAATCCTGGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFGYLLP*ESWPCW
Trigger: CCAACAAGGCCAGGATTCCCATGGCAGGAGATACCC...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATTCCTGTTCCAATGGCTaGAAGGGAAACCGATGTGTA +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDSCSNG*KGNRCV
Trigger: TACACATCGGTTTCCCTTCCAGCCATTGGAACAGGA...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310366.8
ENST00000464300.7
CDS-3UTR CCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTCCTGTTCCAATGGCTaGAAGGGAAACCGATGTGTA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTSCSNG*KGNRCV
Trigger: TACACATCGGTTTCCCTTCCAGCCATTGGAACAGGA...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310366.8
ENST00000464300.7
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTGCTGTCTGGCTTaGAGTAGGTGTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNHCCLA*SRCPWQ
Trigger: CTGCCAAGGACACCTACTCCAAGCCAGACAGCAATG...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAAAGACCTTCTTTGGTTTaGATTGAAGCTACAACATTC +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEERPSLV*IEATTF
Trigger: GAATGTTGTAGCTTCAATCCAAACCAAAGAAGGTCT...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGTCCTCCAGAAGTCTGGACAGTGATCAGCAGGTAATAGACACAGAGGAAGATTCAGACCTTCTTTaGTTTGGATTGAAGCTACAA +
Preference number: 4 (lower is better)
Translates to: SVSSRSLDSDQQVIDTEEDSDLL*FGLKLQ
Trigger: TTGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATC...TTCCTCTGTGTCTATTACCTGCTGATCACTGTCCAGACTTCTGGAGGACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCACTCTTTCTGGAGCATaGGACCAGCTTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTTLSGA*DQLSAK
Trigger: TTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGT...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCTCATCTAACTCTTTCTaGAGCATGGGACCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTSSNSF*SMGPAF
Trigger: GAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGA...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGTTGAGTTGCTCACTCTaGAGTAAGCCAACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLLSCSL*SKPTVV
Trigger: CACAACAGTTGGCTTACTCCAGAGTGAGCAACTCAA...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGAATGATCCTTGCCAGTaGAGTATTCATGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLNDPCQ*SIHALV
Trigger: CACAAGGGCATGAATACTCCACTGGCAAGGATCATT...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTGGAGACATGAGAAATTaGCAGTGGTTTTCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIGDMRN*QWFSLS
Trigger: ACTAAGGGAAAACCACTGCCAATTTCTCATGTCTCC...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGGAAGCAACAGGTGCTaGAGAGGATGTGGAGAAATA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTGSNRC*RGCGEI
Trigger: TATTTCTCCACATCCTCTCCAGCACCTGTTGCTTCC...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATACCTGTTCCAATGGCTaGAAGGGAAACCGATGTGTA +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDTCSNG*KGNRCV
Trigger: TACACATCGGTTTCCCTTCCAGCCATTGGAACAGGT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGATTACCTGTTCCAATaGCTGGAAGGGAAACCGATG +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTDYLFQ*LEGKPM
Trigger: CATCGGTTTCCCTTCCAGCCATTGGAACAGGTAATC...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTCTATTAAAGCCGTGCTaGTTGACATATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTLLKPC*LTYGTE
Trigger: CTCAGTGCCATATGTCAATCAGCACGGCTTTAATAG...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLRSVGL*GFLGGG
Trigger: CCCTCCACCCAAGAATCCTCACAATCCCACAGATCT...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGTATTGTTTGTCACTaGGTCAAAGAGATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDCIVCH*VKEICG
Trigger: CCCACAGATCTCTTTGACTCAGTGACAAACAATACA...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGCTCCACTTATCAACTTaGGATTCAGACCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMLHLST*DSDLLW
Trigger: CCAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAG...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCCCAACTGTTGTGTCATaGGGACACTCAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLPTVVS*GHSSSL
Trigger: CAGGCTGCTTGAGTGTCCTCATGACACAACAGTTGG...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTGCCTTGCTCTCTCTTaGGTTGCTCACTCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNCLALS*VAHSGV
Trigger: TACTCCAGAGTGAGCAACTCAAGAGAGAGCAAGGCA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCATGCTTCAGGATAAATaGGCTGCTAAGCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFMLQDK*AAKHFK
Trigger: CTTAAAATGCTTAGCAGCTCATTTATCCTGAAGCAT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGATATTTGCCATGATCTaGCAAGAAGTCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMIFAMI*QEVSAP
Trigger: TGGAGCAGAGACTTCTTGGCAGATCATGGCAAATAT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR GCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTTAGGAAGCAACAGGTaGTGGAGAGGATGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFLGSNR*WRGCGE
Trigger: TTCTCCACATCCTCTCCAGCACCTGTTGCTTCCTAA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGAATCCTGGCCTTGTTaGGATTTATTCTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMESWPC*DLFLTS
Trigger: ACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTC...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATGGAGTAGGTGTCCTTaGCAGAATAACTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLWSRCP*QNNWHP
Trigger: TGGATGCCAGTTATTCTGCCAAGGACACCTACTCCA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTGGAGTAGGTGTCCTTaGCAGAATAACTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFWSRCP*QNNWHP
Trigger: TGGATGCCAGTTATTCTGCCAAGGACACCTACTCCA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCCATTGCTGTCTGGCTTaGAGTAGGTGTCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLHCCLA*SRCPWQ
Trigger: CTGCCAAGGACACCTACTCCAAGCCAGACAGCAATG...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATCCATTATTCCAGTATaGAGCCACAGCATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLSIIPV*SHSMEH
Trigger: GTGCTCCATGCTGTGGCTCCATACTGGAATAATGGA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCTCAACAGGATACTCGTaGAAAAGATGGTGCATGACT +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTSTGYS*KRWCMT
Trigger: AGTCATGCACCATCTTTTCCACGAGTATCCTGTTGA...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCGTAACTCTAATATACTaGAGGGAAGGGATGGATCTG +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTVTLIY*REGMDL
Trigger: CAGATCCATCCCTTCCCTCCAGTATATTAGAGTTAC...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCGTTCTCACTCACAGGTaGGAATTGAACAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTVLTHR*ELNNEN
Trigger: GTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAAC...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACAAGAACAAGTTCGGGTaGACTTGTCCTTTATGGTAT +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDKNKFG*TCPLWY
Trigger: ATACCATAAAGGACAAGTTCACCCGAACTTGTTCTT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATATTGACATATGGCACTaGGTCTGCATCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHIDIWH*VCICPM
Trigger: CATGGGACAGATGCAGACTCAGTGCCATATGTCAAT...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTACTATTAAAGCCGTGCTaGTTGACATATGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLLLKPC*LTYGTE
Trigger: CTCAGTGCCATATGTCAATCAGCACGGCTTTAATAG...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACAATCTTTCTTGCTaGACTTGTTGTCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDDNLSC*TCCLWT
Trigger: TGTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTC...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTTAGTGCTGGAATTATaGGTGAGTTTGGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTILVLEL*VSLVSY
Trigger: ATAACTCACCAAACTCACTCATAATTCCAGCACTAA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCACTAGAAATACCATTTaGCCCAGCAATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTTRNTI*PSNPIT
Trigger: AGTAATGGGATTGCTGGGTCAAATGGTATTTCTAGT...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGCTCAATCTTCTCTATTaGGTAGGAAGAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMLNLLY*VGRTSS
Trigger: CGAACTTGTTCTTCCTACGCAATAGAGAAGATTGAG...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCGCACAACGTACATGTaGTTTCTCCCATTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHRTTYM*FLPLLS
Trigger: AGACAGCAATGGGAGAAAGCACATGTACGTTGTGCG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATAGAGGAACTGAGGACTaGCAATACCTGACAGAAACG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHRGTED*QYLTET
Trigger: CGTTTCTGTCAGGTATTGGCAGTCCTCAGTTCCTCT...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGCTGTAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDCCKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTACAGCA...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCGATTATAAATCATGCTaGTGTAAAGACACATGCACA +
Preference number: 4 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFDYKSC*CKDTCT
Trigger: TGTGCATGTGTCTTTACAGCAGCATGATTTATAATC...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTTAGGAAGCAACAGGTaGTGGAGAGGATGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHLGSNR*WRGCGE
Trigger: TTCTCCACATCCTCTCCAGCACCTGTTGCTTCCTAA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTTCTCCAGTAGCAACCTaGCAAGAAGTCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFSPVAT*QEVSAP
Trigger: TGGAGCAGAGACTTCTTGGCAGGTTGCTACTGGAGA...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483793.5
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGAATCCTGGCCTTGTTaGGATTTATTCTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDESWPC*DLFLTS
Trigger: ACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTC...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATAGTCAAAGAGATCTGTaGGATTGTGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDSQRDL*DCEDSW
Trigger: CCAAGAATCCTCACAATCCCACAGATCTCTTTGACT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTCCATTATTCCAGTATaGAGCCACAGCATGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNSIIPV*SHSMEH
Trigger: GTGCTCCATGCTGTGGCTCCATACTGGAATAATGGA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGATCCTTGCCAGTaGAGTATTCATGCCCTTGTG +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLNDPCQ*SIHALV
Trigger: CACAAGGGCATGAATACTCCACTGGCAAGGATCATT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGTGCAGCACACCAACATaGCACATGTTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: KHKDLVASALLSLELLTLCSTPT*HMFTYV
Trigger: TACATATGTAAACATGTGCCATGTTGGTGTGCTGCA...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTAACCCCATCAAAAAGTaGGCAAAGGATATGAACGGA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTNPIKK*AKDMNG
Trigger: TCCGTTCATATCCTTTGCCCACTTTTTGATGGGGTT...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGATTACCTGTTCCAATaGCTGGAAGGGAAACCGATG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNDYLFQ*LEGKPM
Trigger: CATCGGTTTCCCTTCCAGCCATTGGAACAGGTAATC...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATATTATAAAATCTCTGTaGGGCTGTGCAGCTAGTACA +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDIIKSL*GCAAST
Trigger: TGTACTAGCTGCACAGCCTCACAGAGATTTTATAAT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTATTATAAAATCTCTGTaGGGCTGTGCAGCTAGTACA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTIIKSL*GCAAST
Trigger: TGTACTAGCTGCACAGCCTCACAGAGATTTTATAAT...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATGTATTGTTTGTCACTaGGTCAAAGAGATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLCIVCH*VKEICG
Trigger: CCCACAGATCTCTTTGACTCAGTGACAAACAATACA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATTCATCTAAAAATGCCTaGCAGCCTTCATCGTCATTT +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDSSKNA*QPSSSF
Trigger: AAATGACGATGAAGGCTGTCAGGCATTTTTAGATGA...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTGCCAGGTATGTGAGTaGTTCACCTTGGAAATAGAC +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNCQVCE*FTLEID
Trigger: GTCTATTTCCAAGGTGAATCACTCACATACCTGGCA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCTTAGTGCTGGAATTATaGGTGAGTTTGGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTLVLEL*VSLVSY
Trigger: ATAACTCACCAAACTCACTCATAATTCCAGCACTAA...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCACAGGTGGGAATTaGACAATGAGAACACATGGA +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHLTGGN*TMRTHG
Trigger: TCCATGTGTTCTCATTGTTCAATTCCCACCTGTGAG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATGCTCTAGCTGGACCATaGAAAACAGCTGATGATTCA +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHALAGP*KTADDS
Trigger: TGAATCATCAGCTGTTTTGCATGGTCCAGCTAGAGC...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTGCCAAGAAGTCTCTaGTCCATTATTCCAGTATGG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHLPRSL*SIIPVW
Trigger: CCATACTGGAATAATGGAGCAGAGACTTCTTGGCAG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTCTGGAAGTAACACCTaGAACTCCGTGCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHSGSNT*NSVHKF
Trigger: GAACTTATGCACGGAGTTGCAGGTGTTACTTCCAGA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGTCGTGGAAAAGATGGTaGATGACTTCAAACATAAAG +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMSWKRW*MTSNIK
Trigger: CTTTATGTTTGAAGTCATGCACCATCTTTTCCACGA...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATATCTGTGCATTCATTTaGTCATTCACACAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDICAFI*SFTQLP
Trigger: TGGAAGCTGTGTGAATGAGCAAATGAATGCACAGAT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCCATTTCCTGTTCCAATaGCTGGAAGGGAAACCGATG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLHFLFQ*LEGKPM
Trigger: CATCGGTTTCCCTTCCAGCCATTGGAACAGGAAATG...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310366.8
ENST00000464300.7
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAGTCAAAGAGATCTGTaGGATTGTGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLSQRDL*DCEDSW
Trigger: CCAAGAATCCTCACAATCCCACAGATCTCTTTGACT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAATGAGAAATTGGCAGTaGTTTTCCCTTAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLMRNWQ*FSLSAG
Trigger: TCCAGCACTAAGGGAAAACCACTGCCAATTTCTCAT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAGGACAGAGAAGAAACTaGAAGGGAGACATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLGQRRN*KGDMRN
Trigger: ATTTCTCATGTCTCCCTTCCAGTTTCTTCTCTGTCC...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCATGGAGAATGTGGACTaGAAGTTCAGTGATGCAGAG +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLMENVD*KFSDAE
Trigger: CTCTGCATCACTGAACTTTCAGTCCACATTCTCCAT...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310366.8
ENST00000464300.7
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTGTATTGTTTGTCACTaGGTCAAAGAGATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNCIVCH*VKEICG
Trigger: CCCACAGATCTCTTTGACTCAGTGACAAACAATACA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCCACTTATCAACTTaGGATTCAGACCTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHLHLST*DSDLLW
Trigger: CCAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATATGCTTCAGGATAAATaGGCTGCTAAGCATTTTAAG +
Preference number: 4 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDMLQDK*AAKHFK
Trigger: CTTAAAATGCTTAGCAGCTCATTTATCCTGAAGCAT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATGCTGTAAAGACACATaGACACGTATGTTTATTGCG +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLCCKDT*TRMFIA
Trigger: CGCAATAAACATACGTGTGCATGTGTCTTTACAGCA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACGATTATAAATCATGCTaGTGTAAAGACACATGCACA +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDDYKSC*CKDTCT
Trigger: TGTGCATGTGTCTTTACAGCAGCATGATTTATAATC...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACAAGGATTATAAATCATaGTGCTGTAAAGACACATGC +
Preference number: 4 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDKDYKS*CCKDTC
Trigger: GCATGTGTCTTTACAGCAGCATGATTTATAATCCTT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGAAGGATTATAAATCATaGTGCTGTAAAGACACATGC +
Preference number: 4 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMKDYKS*CCKDTC
Trigger: GCATGTGTCTTTACAGCAGCATGATTTATAATCCTT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATAGTCAAAGAGATCTGTaGGATTGTGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNSQRDL*DCEDSW
Trigger: CCAAGAATCCTCACAATCCCACAGATCTCTTTGACT...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CCA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTGATTCAGACCTTCTTTaGTTTGGATTGAAGCTACAA +
Preference number: 4 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTDSDLL*FGLKLQ
Trigger: TTGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATC...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCACTCTTTCTGGAGCATaGGACCAGCTTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLTLSGA*DQLSAK
Trigger: TTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGT...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTTTGAGTTGCTCACTCTaGAGTAAGCCAACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFLSCSL*SKPTVV
Trigger: CACAACAGTTGGCTTACTCCAGAGTGAGCAACTCAA...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTCAACAGGATACTCGTaGAAAAGATGGTGCATGACT +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHSTGYS*KRWCMT
Trigger: AGTCATGCACCATCTTTTCCACGAGTATCCTGTTGA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATGTAACTCTAATATACTaGAGGGAAGGGATGGATCTG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHVTLIY*REGMDL
Trigger: CAGATCCATCCCTTCCCTCCAGTATATTAGAGTTAC...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGGACAGAGAAGAAACTaGAAGGGAGACATGAGAAAT +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNGQRRN*KGDMRN
Trigger: ATTTCTCATGTCTCCCTTCCAGTTTCTTCTCTGTCC...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTGCAGCACACCAACATaGCACATGTTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFCSTPT*HMFTYV
Trigger: TACATATGTAAACATGTGCCATGTTGGTGTGCTGCA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGTTCTCACTCACAGGTaGGAATTGAACAATGAGAAC +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNVLTHR*ELNNEN
Trigger: GTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAAC...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCTCTCCAGTAGCAACCTaGAAAGTAATTGCACCGATT +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLSPVAT*KVIAPI
Trigger: AATCGGTGCAATTACTTTTCAGGTTGCTACTGGAGA...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATATTATAAAATCTCTGTaGGGCTGTGCAGCTAGTACA +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHIIKSL*GCAAST
Trigger: TGTACTAGCTGCACAGCCTCACAGAGATTTTATAAT...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATAAGAACAAGTTCGGGTaGACTTGTCCTTTATGGTAT +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHKNKFG*TCPLWY
Trigger: ATACCATAAAGGACAAGTTCACCCGAACTTGTTCTT...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATAAGAACAAGTTCGGGTaGACTTGTCCTTTATGGTAT +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNKNKFG*TCPLWY
Trigger: ATACCATAAAGGACAAGTTCACCCGAACTTGTTCTT...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR TCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCGACAATCTTTCTTGCTaGACTTGTTGTCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLDNLSC*TCCLWT
Trigger: TGTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTC...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAATGGTTGTAGCTCTGTaGCATTTACCATACATTTCT +
Preference number: 4 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLMVVAL*HLPYIS
Trigger: AGAAATGTATGGTAAATGTCACAGAGCTACAACCAT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTTCAGTCATTTCAGCTaGACTATTGACAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFFSHFS*TIDKFS
Trigger: GGAAAACTTGTCAATAGTTCAGCTGAAATGACTGAA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATACTAGAAATACCATTTaGCCCAGCAATCCCATTACT +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNTRNTI*PSNPIT
Trigger: AGTAATGGGATTGCTGGGTCAAATGGTATTTCTAGT...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCTCAATCTTCTCTATTaGGTAGGAAGAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNLNLLY*VGRTSS
Trigger: CGAACTTGTTCTTCCTACGCAATAGAGAAGATTGAG...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCAATCTTCTCTATTaGGTAGGAAGAACAAGTTCG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHLNLLY*VGRTSS
Trigger: CGAACTTGTTCTTCCTACGCAATAGAGAAGATTGAG...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR GCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTTTATCGGCCTTGTGCTaGTACTGTATTCGAACACTT +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFLSALC*YCIRTL
Trigger: AAGTGTTCGAATACAGTAGCAGCACAAGGCCGATAA...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR GCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATAAGAGGAATAAAACTTaGTCTGTGTCCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNKRNKT*SVSSRS
Trigger: ACTTCTGGAGGACACAGAGCAAGTTTTATTCCTCTT...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCGAATCCTGGCCTTGTTaGGATTTATTCTTGACCAGT +
Preference number: 4 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLESWPC*DLFLTS
Trigger: ACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTC...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTAGTCAAAGAGATCTGTaGGATTGTGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFSQRDL*DCEDSW
Trigger: CCAAGAATCCTCACAATCCCACAGATCTCTTTGACT...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCAGACCTTCTTTGGTTTaGATTGAAGCTACAACATTC +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFRPSLV*IEATTF
Trigger: GAATGTTGTAGCTTCAATCCAAACCAAAGAAGGTCT...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTACTCGTGGAAAAGATaGTGCATGACTTCAAACATA +
Preference number: 4 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFYSWKR*CMTSNI
Trigger: TATGTTTGAAGTCATGCACCATCTTTTCCACGAGTA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTATGAGAAATTGGCAGTaGTTTTCCCTTAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFMRNWQ*FSLSAG
Trigger: TCCAGCACTAAGGGAAAACCACTGCCAATTTCTCAT...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTCGTGGAAAAGATGGTaGATGACTTCAAACATAAAG +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHSWKRW*MTSNIK
Trigger: CTTTATGTTTGAAGTCATGCACCATCTTTTCCACGA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR GCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTAAGAGGAATAAAACTTaGTCTGTGTCCTCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFKRNKT*SVSSRS
Trigger: ACTTCTGGAGGACACAGAGCAAGTTTTATTCCTCTT...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CCA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGTATATACCAGAAAGTaGACTTCTTGTAAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNVYTRK*TSCKGL
Trigger: TAGCCCTTTACAAGAAGTCCACTTTCTGGTATATAC...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CCA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTACTCGTGGAAAAGATaGTGCATGACTTCAAACATA +
Preference number: 4 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHYSWKR*CMTSNI
Trigger: TATGTTTGAAGTCATGCACCATCTTTTCCACGAGTA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR TCA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTATGGTTGTAGCTCTGTaGCATTTACCATACATTTCT +
Preference number: 4 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFMVVAL*HLPYIS
Trigger: AGAAATGTATGGTAAATGTCACAGAGCTACAACCAT...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCAGTCCCGACCACACCTaGGGTATCTCCTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFSPDHT*GISCHG
Trigger: CCCATGGCAGGAGATACCCAAGGTGTGGTCGGGACT...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS TCA 90 bp CCAGCTTTCTGCAAAAATGCCCGAGATAGTGGTCCTCCTCCAAGCTaGAGATTCATGGGAACGCTGTTGACAATGACATCGGCCCAGATG +
Preference number: 5 (lower is better)
Translates to: PAFCKNARDSGPPPS*RFMGTLLTMTSAQM
Trigger: CATCTGGGCCGATGTCATTGTCAACAGCGTTCCCATGAATCTTCAGCTTGGAGGAGGACCACTATCTCGGGCATTTTTGCAGAAAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CCA 90 bp TTTCCTCTGTTTCCCGCCTTCTGTCATCTAACTCTTTCTGGAGCATaGGACCAGCTTTCTGCAAAAATGCCCGAGATAGTGGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: FPLFPAFCHLTLSGA*DQLSAKMPEIVVLL
Trigger: GAGGAGGACCACTATCTCGGGCATTTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGACAGAAGGCGGGAAACAGAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS-3UTR CAA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGGCATGGAGCACAGCTTaGCAGTCCAGATTGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QTPHVLTHRWELNNENTWAWSTA*QSRLQP
Trigger: CGGCTGCAATCTGGACTGCAAAGCTGTGCTCCATGC...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTAGTCCCGACCACACCTaGGGTATCTCCTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: LTQARSKDKDCMLFLQMTSPDHT*GISCHG
Trigger: CCCATGGCAGGAGATACCCAAGGTGTGGTCGGGACT...AGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CAA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATAGTCCCGACCACACCTaGGGTATCTCCTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDSPDHT*GISCHG
Trigger: CCCATGGCAGGAGATACCCAAGGTGTGGTCGGGACT...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CAA 90 bp TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCTTCATGGGAACGCTGTaGACAATGACATCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: CWWDCKLVQPLWKSVWRFFMGTL*TMTSAQ
Trigger: CTGGGCCGATGTCATTGTCAACAGCGTTCCCATGAA...GAATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS TCA 90 bp GATCGTGTATTGTTTGTCACTGAGTCAAAGAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGGGTGACTAATCCTGCACGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: DRVLFVTESKRSVGL*GFLGGGVTNPARPF
Trigger: AAAGGGACGTGCAGGATTAGTCACCCCTCCACCCAAGAATCCTCACAATCCCACAGATCTCTTTGACTCAGTGACAAACAATACACGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
ENST00000493645.1
CDS TCA 90 bp CAGCATGGAGCACAGCTTTGCAGTCCAGATTGCAGCCGCTTGTCATaGATATGTTACCTACTTTTTCCTCTGTTTCCCGCCTTCTGTCAT +
Preference number: 5 (lower is better)
Translates to: QHGAQLCSPDCSRLS*ICYLLFPLFPAFCH
Trigger: ATGACAGAAGGCGGGAAACAGAGGAAAAAGTAGGTAACATATTCATGACAAGCGGCTGCAATCTGGACTGCAAAGCTGTGCTCCATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CCA 90 bp CCTACTTTTTCCTCTGTTTCCCGCCTTCTGTCATCTAACTCTTTCTaGAGCATGGGACCAGCTTTCTGCAAAAATGCCCGAGATAGTGGT +
Preference number: 5 (lower is better)
Translates to: PTFSSVSRLLSSNSF*SMGPAFCKNARDSG
Trigger: ACCACTATCTCGGGCATTTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGACAGAAGGCGGGAAACAGAGGAAAAAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS-3UTR CAA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGGCTTTGCAGTCCAGATaGCAGCCGCTTGTCATGAAT +
Preference number: 5 (lower is better)
Translates to: QTPHVLTHRWELNNENTWALQSR*QPLVMN
Trigger: ATTCATGACAAGCGGCTGCAATCTGGACTGCAAAGC...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGCTTTGCAGTCCAGATaGCAGCCGCTTGTCATGAAT +
Preference number: 5 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMALQSR*QPLVMN
Trigger: ATTCATGACAAGCGGCTGCAATCTGGACTGCAAAGC...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTTCTTGCTGAACTTGTaGTCTCTGGACATACTCCGG +
Preference number: 5 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIFLLNL*SLDILR
Trigger: CCGGAGTATGTCCAGAGACAACAAGTTCAGCAAGAA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp AAACATAAAGATTTGGTAGCTTCTGCCTTGCTCTCTCTTGAGTTGCTCACTCTGGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: KHKDLVASALLSLELLTLGILAL*GFILDQ
Trigger: CTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCC...CAGAGTGAGCAACTCAAGAGAGAGCAAGGCAGAAGCTACCAAATCTTTATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CAA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTTCATGGGAACGCTGTaGACAATGACATCGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFFMGTL*TMTSAQ
Trigger: CTGGGCCGATGTCATTGTCAACAGCGTTCCCATGAA...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACGGAGTAAGCCAACTGTaGTGTCATGAGGACACTCAA +
Preference number: 5 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDGVSQL*CHEDTQ
Trigger: TTGAGTGTCCTCATGACACAACAGTTGGCTTACTCC...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTACTCACAGGTGGGAATaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTITHRWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGT...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDGILAL*GFILDQ
Trigger: CTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCC...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CAA 90 bp TCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCTCAGCTTCCACCATGGGAATCCTGGCCTaGTTGGGATTTATTCTTGAC +
Preference number: 5 (lower is better)
Translates to: SVNGCSSVTFTIHFSASTMGILA*LGFILD
Trigger: GTCAAGAATAAATCCCAACAAGGCCAGGATTCCCAT...GGTGGAAGCTGAGAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CAA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACACATCCCCTGACATCTaGTCTGTAACTTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDTSPDI*SVTSER
Trigger: TCTCTCTGAAGTTACAGACAAGATGTCAGGGGATGT...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp TCTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGGAGTAAGCCAACTGTaGTGTCATGAGGACACTCAA +
Preference number: 5 (lower is better)
Translates to: SAYTGQKQRQRLHVVLTDGVSQL*CHEDTQ
Trigger: TTGAGTGTCCTCATGACACAACAGTTGGCTTACTCC...ATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACGGTTCCCTGAAGATGTaGAGTGCTGAAAGTGATCAA +
Preference number: 5 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDGSLKM*SAESDQ
Trigger: TTGATCACTTTCAGCACTCAACATCTTCAGGGAACC...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTCACAGGTGGGAATaGAACAATGAGAACACATGG +
Preference number: 5 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMTHRWE*NNENTW
Trigger: CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTTCTCAATCTTCTCTATaGCGTAGGAAGAACAAGTTC +
Preference number: 5 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTISQSSL*RRKNKF
Trigger: GAACTTGTTCTTCCTACGCAATAGAGAAGATTGAGA...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGAGATTCAGACCTTCTTaGGTTTGGATTGAAGCTACA +
Preference number: 5 (lower is better)
Translates to: QTPHVLTHRWELNNENTWRFRPS*VWIEAT
Trigger: TGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATCT...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CAAACACCACATGTTCTCACTCACAGGTGGGAATTGAACAATGAGAACACATGGTCTCCACTTATCAACTaGAGATTCAGACCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: QTPHVLTHRWELNNENTWSPLIN*RFRPSL
Trigger: CAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAGA...CCATGTGTTCTCATTGTTCAATTCCCACCTGTGAGTGAGAACATGTGGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHGILAL*GFILDQ
Trigger: CTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCC...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CAA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAATGGGAATCCTGGCCTaGTTGGGATTTATTCTTGAC +
Preference number: 5 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLMGILA*LGFILD
Trigger: GTCAAGAATAAATCCCAACAAGGCCAGGATTCCCAT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS-3UTR CAA 90 bp GCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACGAGATCGTGTATTGTTaGTCACTGAGTCAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: AYTGQKQRQRLHVVLTDDEIVYC*SLSQRD
Trigger: ATCTCTTTGACTCAGTGACAAACAATACACGATCTC...GTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGTTTGGAGATCGTGTATaGTTTGTCACTGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMFGDRV*FVTESK
Trigger: CTTTGACTCAGTGACAAACAATACACGATCTCCAAA...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp ATTGTGGAAGTCAGTGTGGCGATTCCTCGGGGATCTAGAACTAGAAATACCATTATACCACAAATAGCTTaGGAGATCGTGTATTGTTTG +
Preference number: 5 (lower is better)
Translates to: IVEVSVAIPRGSRTRNTIIPQIA*EIVYCL
Trigger: CAAACAATACACGATCTCCAAAGCTATTTGTGGTAT...AATGGTATTTCTAGTTCTAGATCCCCGAGGAATCGCCACACTGACTTCCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CTGCTTACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGAGCCTTCATCGTCATTaGTATATACCAGAAAGTGGA +
Preference number: 5 (lower is better)
Translates to: LLTQARSKDKDCMLFLQMSLHRH*YIPESG
Trigger: TCCACTTTCTGGTATATACAAATGACGATGAAGGCT...CATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTAAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS-3UTR CAA 90 bp AGAGATTTGGTGTCTGTGAATGGTTGTAGCTCTGTGACATTTACCATACATTTCACATCCCCTGACATCTaGTCTGTAACTTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: RDLVSVNGCSSVTFTIHFTSPDI*SVTSER
Trigger: TCTCTCTGAAGTTACAGACAAGATGTCAGGGGATGT...GAAATGTATGGTAAATGTCACAGAGCTACAACCATTCACAGACACCAAATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS GCA 90 bp TACCTGTTCAGTGGCTATATCTCCAGTAGCAACCTGAAAAGTAATTaGACCGATTTTCATTTCATATGCTGTGAAACAAGGCTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: YLFSGYISSSNLKSN*TDFHFICCETRLRD
Trigger: GTCTCTAAGCCTTGTTTCACAGCATATGAAATGAAAATCGGTGCAATTACTTTTCAGGTTGCTACTGGAGATATAGCCACTGAACAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000493645.1
CDS-3UTR CAA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTTTCTTGCTGAACTTGTaGTCTCTGGACATACTCCGG +
Preference number: 5 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFFLLNL*SLDILR
Trigger: CCGGAGTATGTCCAGAGACAACAAGTTCAGCAAGAA...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATGGTTCCCTGAAGATGTaGAGTGCTGAAAGTGATCAA +
Preference number: 5 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHGSLKM*SAESDQ
Trigger: TTGATCACTTTCAGCACTCAACATCTTCAGGGAACC...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS TCA 90 bp TGGCATATTTTCAATCTTAATGGTTGTTGTCTGTTCCAAAGGTTCTaGGGAAATCTGAAGTTGCTGAACTTCCATGGTGTCCATCACAAA +
Preference number: 5 (lower is better)
Translates to: WHIFNLNGCCLFQRF*GNLKLLNFHGVHHK
Trigger: TTTGTGATGGACACCATGGAAGTTCAGCAACTTCAGATTTCCTCAGAACCTTTGGAACAGACAACAACCATTAAGATTGAAAATATGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS TCA 90 bp CAGCTTTGGGAAACTGCAAACTTCCTGTTCCAATCATGGGAAATGTaGTTGATGAGAAAGATAGCACTTCTACAGTTGTCAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: QLWETANFLFQSWEM*LMRKIALLQLSNIS
Trigger: AGAAATGTTTGACAACTGTAGAAGTGCTATCTTTCTCATCAATCACATTTCCCATGATTGGAACAGGAAGTTTGCAGTTTCCCAAAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000465304.5
CDS CCA 90 bp TCTGTTCCAAAGGTTCTGAGGAAATCTGAAGTTGCTGAACTTCCATaGTGTCCATCACAAACATTAATAAATGTGTTGACATCCTACGTT +
Preference number: 5 (lower is better)
Translates to: SVPKVLRKSEVAELP*CPSQTLINVLTSYV
Trigger: AACGTAGGATGTCAACACATTTATTAATGTTTGTGATGGACACCATGGAAGTTCAGCAACTTCAGATTTCCTCAGAACCTTTGGAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS-3UTR CAA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATCTCAATCTTCTCTATaGCGTAGGAAGAACAAGTTC +
Preference number: 5 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLSQSSL*RRKNKF
Trigger: GAACTTGTTCTTCCTACGCAATAGAGAAGATTGAGA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTATTTGGAGATCGTGTATaGTTTGTCACTGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLFGDRV*FVTESK
Trigger: CTTTGACTCAGTGACAAACAATACACGATCTCCAAA...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATGAGATCGTGTATTGTTaGTCACTGAGTCAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNEIVYC*SLSQRD
Trigger: ATCTCTTTGACTCAGTGACAAACAATACACGATCTC...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTTTGGAGATCGTGTATaGTTTGTCACTGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHFGDRV*FVTESK
Trigger: CTTTGACTCAGTGACAAACAATACACGATCTCCAAA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTTTGGAGATCGTGTATaGTTTGTCACTGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNFGDRV*FVTESK
Trigger: CTTTGACTCAGTGACAAACAATACACGATCTCCAAA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp TACACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAATACCACAAATAGCTTaGGAGATCGTGTATTGTTTG +
Preference number: 5 (lower is better)
Translates to: YTGQKQRQRLHVVLTDDLIPQIA*EIVYCL
Trigger: CAAACAATACACGATCTCCAAAGCTATTTGTGGTAT...TAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATAGATTCAGACCTTCTTaGGTTTGGATTGAAGCTACA +
Preference number: 5 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHRFRPS*VWIEAT
Trigger: TGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATCT...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp GGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATTCTCCACTTATCAACTaGAGATTCAGACCTTCTTTG +
Preference number: 5 (lower is better)
Translates to: GQKQRQRLHVVLTDDLNHSPLIN*RFRPSL
Trigger: CAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAGA...ATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp ACAGGCCAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATTATTCTCCTAGAGATTaGGTGTCTGTGAATGGTTGT +
Preference number: 5 (lower is better)
Translates to: TGQKQRQRLHVVLTDDLNYSPRD*VSVNGC
Trigger: ACAACCATTCACAGACACCAAATCTCTAGGAGAATA...ATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTGGCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS GCA 90 bp AACACTTCTGAAAGGATTAGTTTAGCAAAAACAGCTTTGGGAAACTaGAAACTTCCTGTTCCAATCATGGGAAATGTGATTGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: NTSERISLAKTALGN*KLPVPIMGNVIDEK
Trigger: TTTCTCATCAATCACATTTCCCATGATTGGAACAGGAAGTTTGCAGTTTCCCAAAGCTGTTTTTGCTAAACTAATCCTTTCAGAAGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000465304.5
CDS-3UTR CAA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCTCTCAATCTTCTCTATaGCGTAGGAAGAACAAGTTC +
Preference number: 5 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLSQSSL*RRKNKF
Trigger: GAACTTGTTCTTCCTACGCAATAGAGAAGATTGAGA...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCGAGATCGTGTATTGTTaGTCACTGAGTCAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLEIVYC*SLSQRD
Trigger: ATCTCTTTGACTCAGTGACAAACAATACACGATCTC...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS-3UTR CAA 90 bp TGGTTTTCCCTTAGTGCTGGAATTATGAGTGAGTTTGGTGAGTTATTTTTCTTTATACCACAAATAGCTTaGGAGATCGTGTATTGTTTG +
Preference number: 5 (lower is better)
Translates to: WFSLSAGIMSEFGELFFFIPQIA*EIVYCL
Trigger: CAAACAATACACGATCTCCAAAGCTATTTGTGGTAT...AAAGAAAAATAACTCACCAAACTCACTCATAATTCCAGCACTAAGGGAAAACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS-3UTR CAA 90 bp CAGAAGCAAAGACAAAGATTGCATGTTGTTCTTACAGATGACTTAAATCATCTCATACCACAAATAGCTTaGGAGATCGTGTATTGTTTG +
Preference number: 5 (lower is better)
Translates to: QKQRQRLHVVLTDDLNHLIPQIA*EIVYCL
Trigger: CAAACAATACACGATCTCCAAAGCTATTTGTGGTAT...GAGATGATTTAAGTCATCTGTAAGAACAACATGCAATCTTTGTCTTTGCTTCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS CCA 72 bp AGACAGTCCCGACCACACCTTGGGTATCTCCTGCCATaGGAATCCTGGCCTTGTTGGGATTTATTCTTGACC +
Preference number: 6 (lower is better)
Translates to: RQSRPHLGYLLP*ESWPCWDLFLT
Trigger: GGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGTGTGGTCGGGACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000493645.1
CDS CCA 72 bp TCCTCTGTTTCCCGCCTTCTGTCATCTAACTCTTTCTaGAGCATGGGACCAGCTTTCTGCAAAAATGCCCGA +
Preference number: 6 (lower is better)
Translates to: SSVSRLLSSNSF*SMGPAFCKNAR
Trigger: TCGGGCATTTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGACAGAAGGCGGGAAACAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS TCA 72 bp TGCAAAAATGCCCGAGATAGTGGTCCTCCTCCAAGCTaGAGATTCATGGGAACGCTGTTGACAATGACATCG +
Preference number: 6 (lower is better)
Translates to: CKNARDSGPPPS*RFMGTLLTMTS
Trigger: CGATGTCATTGTCAACAGCGTTCCCATGAATCTTCAGCTTGGAGGAGGACCACTATCTCGGGCATTTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS TCA 72 bp GCACAGCTTTGCAGTCCAGATTGCAGCCGCTTGTCATaGATATGTTACCTACTTTTTCCTCTGTTTCCCGCC +
Preference number: 6 (lower is better)
Translates to: AQLCSPDCSRLS*ICYLLFPLFPA
Trigger: GGCGGGAAACAGAGGAAAAAGTAGGTAACATATTCATGACAAGCGGCTGCAATCTGGACTGCAAAGCTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CCA 72 bp TTTCCCGCCTTCTGTCATCTAACTCTTTCTGGAGCATaGGACCAGCTTTCTGCAAAAATGCCCGAGATAGTG +
Preference number: 6 (lower is better)
Translates to: FPAFCHLTLSGA*DQLSAKMPEIV
Trigger: CACTATCTCGGGCATTTTTGCAGAAAGCTGGTCCCATGCTCCAGAAAGAGTTAGATGACAGAAGGCGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CAA 90 bp CCGACCACACCTTGGGTATCTCCTGCCATGGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAGTTAGTGAATTCATCTAAAAATGCC +
Preference number: 6 (lower is better)
Translates to: PTTPWVSPAMGILAL*GFILDQLVNSSKNA
Trigger: GGCATTTTTAGATGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGTGTGGTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000493645.1
CDS TCA 72 bp TTGTTTGTCACTGAGTCAAAGAGATCTGTGGGATTGTaGGGATTCTTGGGTGGAGGGGTGACTAATCCTGCA +
Preference number: 6 (lower is better)
Translates to: LFVTESKRSVGL*GFLGGGVTNPA
Trigger: TGCAGGATTAGTCACCCCTCCACCCAAGAATCCTCACAATCCCACAGATCTCTTTGACTCAGTGACAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
ENST00000493645.1
CDS CAA 72 bp GTCCAGCCAAAGCCTCCTGACAGCCTTCATCGTCATTaGTATATACCAGAAAGTGGACTTCTTGTAAAGGGC +
Preference number: 6 (lower is better)
Translates to: VQPKPPDSLHRH*YIPESGLLVKG
Trigger: GCCCTTTACAAGAAGTCCACTTTCTGGTATATACAAATGACGATGAAGGCTGTCAGGAGGCTTTGGCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS CAA 90 bp GTCCCGACCACACCTTGGGTATCTCCTGCCATGGGAATCCTGGCCTaGTTGGGATTTATTCTTGACCAGTTAGTGAATTCATCTAAAAAT +
Preference number: 6 (lower is better)
Translates to: VPTTPWVSPAMGILA*LGFILDQLVNSSKN
Trigger: ATTTTTAGATGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGTGTGGTCGGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000493645.1
CDS CAA 90 bp CCGACCACACCTTGGGTATCTCCTGCCATGGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAGTTAGTGAATTCATCTAAAAATGCA +
Preference number: 6 (lower is better)
Translates to: PTTPWVSPAMGILAL*GFILDQLVNSSKNA
Trigger: TGCATTTTTAGATGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGTGTGGTCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS CAA 72 bp CCTTGGGTATCTCCTGCCATGGGAATCCTGGCCTTGTaGGGATTTATTCTTGACCAGTTAGTGAATTCATCT +
Preference number: 6 (lower is better)
Translates to: PWVSPAMGILAL*GFILDQLVNSS
Trigger: AGATGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000493645.1
CDS CAA 72 bp ACACCTTGGGTATCTCCTGCCATGGGAATCCTGGCCTaGTTGGGATTTATTCTTGACCAGTTAGTGAATTCA +
Preference number: 6 (lower is better)
Translates to: TPWVSPAMGILA*LGFILDQLVNS
Trigger: TGAATTCACTAACTGGTCAAGAATAAATCCCAACAAGGCCAGGATTCCCATGGCAGGAGATACCCAAGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000493645.1
CDS CAA 72 bp ACATTCCTGATTGAAAGACAATCTTTCTTGCTGAACTaGTTGTCTCTGGACATACTCCGGGAGGAAGAGCGC +
Preference number: 6 (lower is better)
Translates to: TFLIERQSFLLN*LSLDILREEER
Trigger: GCGCTCTTCCTCCCGGAGTATGTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTCTTTCAATCAGGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS CAA 90 bp GTTTGGATTGAAGCTACAACATTCCTGATTGAAAGACAATCTTTCTaGCTGAACTTGTTGTCTCTGGACATACTCCGGGAGGAAGAGCGC +
Preference number: 6 (lower is better)
Translates to: VWIEATTFLIERQSF*LNLLSLDILREEER
Trigger: GCGCTCTTCCTCCCGGAGTATGTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTCTTTCAATCAGGAATGTTGTAGCTTCAATCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464300.7
ENST00000483793.5
CDS CAA 90 bp ACAATGACATCGGCCCAGATGTACAGAACATCTCCACTTATCAACTaGAGATTCAGACCTTCTTTGGTTTGGATTGAAGCTACAACATTC +
Preference number: 6 (lower is better)
Translates to: TMTSAQMYRTSPLIN*RFRPSLVWIEATTF
Trigger: GAATGTTGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAGATGTTCTGTACATCTGGGCCGATGTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CAA 72 bp AGAATACCACAAATAGCTTTGGAGATCGTGTATTGTTaGTCACTGAGTCAAAGAGATCTGTGGGATTGTGAG +
Preference number: 6 (lower is better)
Translates to: RIPQIALEIVYC*SLSQRDLWDCE
Trigger: CTCACAATCCCACAGATCTCTTTGACTCAGTGACAAACAATACACGATCTCCAAAGCTATTTGTGGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS CAA 90 bp GATTATCAAAGAATACCACAAATAGCTTTGGAGATCGTGTATTGTTaGTCACTGAGTCAAAGAGATCTGTGGGATTGTGAGGATTCTTGG +
Preference number: 6 (lower is better)
Translates to: DYQRIPQIALEIVYC*SLSQRDLWDCEDSW
Trigger: CCAAGAATCCTCACAATCCCACAGATCTCTTTGACTCAGTGACAAACAATACACGATCTCCAAAGCTATTTGTGGTATTCTTTGATAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS TCA 72 bp GGAAGAGGAGTCTCTCATTATTCTTATGGTCATTCTTaGTATCCATTTGCCTTTTCTTTACCTGGTAGCTCT +
Preference number: 6 (lower is better)
Translates to: GRGVSHYSYGHS*YPFAFSLPGSS
Trigger: AGAGCTACCAGGTAAAGAAAAGGCAAATGGATATCAAGAATGACCATAAGAATAATGAGAGACTCCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
ENST00000493645.1
CDS CAA 72 bp TCAAAGAATACCACAAATAGCTTTGGAGATCGTGTATaGTTTGTCACTGAGTCAAAGAGATCTGTGGGATTG +
Preference number: 6 (lower is better)
Translates to: SKNTTNSFGDRV*FVTESKRSVGL
Trigger: CAATCCCACAGATCTCTTTGACTCAGTGACAAACAATACACGATCTCCAAAGCTATTTGTGGTATTCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS CAA 72 bp ATTCATCTAAAAATGCCTGACAGCCTTCATCGTCATTaGTATATACCAGAAAGTGGACTTCTTGTAAAGGGC +
Preference number: 6 (lower is better)
Translates to: IHLKMPDSLHRH*YIPESGLLVKG
Trigger: GCCCTTTACAAGAAGTCCACTTTCTGGTATATACAAATGACGATGAAGGCTGTCAGGCATTTTTAGATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464300.7
CDS CAA 90 bp GTTTGGATTGAAGCTACAACATTCCTGATTGAAAGACAATCTTTCTaGCTGAACTTGTTGTCTCTGGAATTCACCATCAAGTGGCATATT +
Preference number: 6 (lower is better)
Translates to: VWIEATTFLIERQSF*LNLLSLEFTIKWHI
Trigger: AATATGCCACTTGATGGTGAATTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTCTTTCAATCAGGAATGTTGTAGCTTCAATCCAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS TCA 72 bp CAATCTTCTCTATTGCGTAGGAAGAACAAGTTCGGGTaGACTTGTCCTTTATGGTATTATATTCTGATTGTC +
Preference number: 6 (lower is better)
Translates to: QSSLLRRKNKFG*TCPLWYYILIV
Trigger: GACAATCAGAATATAATACCATAAAGGACAAGTTCACCCGAACTTGTTCTTCCTACGCAATAGAGAAGATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
ENST00000493645.1
CDS CCA 72 bp AAGGTTCTGAGGAAATCTGAAGTTGCTGAACTTCCATaGTGTCCATCACAAACATTAATAAATGTGTTGACA +
Preference number: 6 (lower is better)
Translates to: KVLRKSEVAELP*CPSQTLINVLT
Trigger: TGTCAACACATTTATTAATGTTTGTGATGGACACCATGGAAGTTCAGCAACTTCAGATTTCCTCAGAACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS CAA 72 bp GGTAAGCCTGATTATCAAAGAATACCACAAATAGCTTaGGAGATCGTGTATTGTTTGTCACTGAGTCAAAGA +
Preference number: 6 (lower is better)
Translates to: GKPDYQRIPQIA*EIVYCLSLSQR
Trigger: TCTTTGACTCAGTGACAAACAATACACGATCTCCAAAGCTATTTGTGGTATTCTTTGATAATCAGGCTTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310366.8
ENST00000464300.7
ENST00000483793.5
ENST00000493645.1
CDS CAA 72 bp ACATTCCTGATTGAAAGACAATCTTTCTTGCTGAACTaGTTGTCTCTGGAATTCACCATCAAGTGGCATATT +
Preference number: 6 (lower is better)
Translates to: TFLIERQSFLLN*LSLEFTIKWHI
Trigger: AATATGCCACTTGATGGTGAATTCCAGAGACAACAAGTTCAGCAAGAAAGATTGTCTTTCAATCAGGAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465304.5
CDS CAA 72 bp ACATCTCCACTTATCAACTTGAGATTCAGACCTTCTTaGGTTTGGATTGAAGCTACAACATTCCTGATTGAA +
Preference number: 6 (lower is better)
Translates to: TSPLINLRFRPS*VWIEATTFLIE
Trigger: TTCAATCAGGAATGTTGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAGATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5
CDS CAA 90 bp ATGTACAGAACATCTCCACTTATCAACTTGAGATTCAGACCTTCTTaGGTTTGGATTGAAGCTACAACATTCCTGATTGAAAGACAATCT +
Preference number: 6 (lower is better)
Translates to: MYRTSPLINLRFRPS*VWIEATTFLIERQS
Trigger: AGATTGTCTTTCAATCAGGAATGTTGTAGCTTCAATCCAAACCAAAGAAGGTCTGAATCTCAAGTTGATAAGTGGAGATGTTCTGTACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000464300.7
ENST00000465304.5
ENST00000483793.5