RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000178685

Ensembl transcript IDs: ENST00000313028.12, ENST00000313059.9, ENST00000524918.5, ENST00000525486.5, ENST00000525773.5, ENST00000525879.5, ENST00000526007.5, ENST00000526985.1, ENST00000527262.5, ENST00000528136.5, ENST00000528580.1, ENST00000528625.5, ENST00000528914.5, ENST00000528963.1, ENST00000529311.5, ENST00000529842.5, ENST00000530478.5, ENST00000531537.5, ENST00000531707.1, ENST00000532311.5, ENST00000532660.1, ENST00000533665.1, ENST00000534737.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACAGCACCTaGTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGG +
Preference number: 1 (lower is better)
Translates to: QMSGTAGAVVPWYST*STGRRSHRCSRRSR
Trigger: CCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 90 bp AAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTaGTACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: KPWAQMSGTAGAVVP*YSTCSTGRRSHRCS
Trigger: GCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR TCA 90 bp CGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGC +
Preference number: 1 (lower is better)
Translates to: RPSRRPWRCGRRSCG*SRGRRCQALPVPSC
Trigger: GCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp GAAGCTGCGGTTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAGCACCTGCTCCACCGGGCGCCGCTC +
Preference number: 1 (lower is better)
Translates to: EAAVEAVGADVRHCR*RRAVVQHLLHRAPL
Trigger: GAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp GCCGCAGAAGCTGCGGTTGAAGCCGTGGGCGCAGATGTCAGGCACTaGCGGTGCCGTCGTGCCGTGGTACAGCACCTGCTCCACCGGGCG +
Preference number: 1 (lower is better)
Translates to: AAEAAVEAVGADVRH*RCRRAVVQHLLHRA
Trigger: CGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 90 bp CAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATCGGCGTTaGGGGGCGAGTAGCGGTCCTGCACCGACAGGGAGGCGCGCCTGG +
Preference number: 1 (lower is better)
Translates to: QSAPVPRTPPYGHRR*GASSGPAPTGRRAW
Trigger: CCAGGCGCGCCTCCCTGTCGGTGCAGGACCGCTACTCGCCCCCCAACGCCGATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp CGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTCATACTGCTaGTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGG +
Preference number: 1 (lower is better)
Translates to: RSHRCSRRSRYSSYC*CSSGCDTRSTRTTR
Trigger: CCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp CGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTCATACTaGTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACG +
Preference number: 1 (lower is better)
Translates to: RRSHRCSRRSRYSSY*CCSSGCDTRSTRTT
Trigger: CGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp GTGCCGTGGTACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTaGAGCAGGCGCTCCCGGTACAGCTCATACTGCTGCTGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: VPWYSTCSTGRRSHR*SRRSRYSSYCCCSS
Trigger: GCTGCTGCAGCAGCAGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 90 bp GGGTCGTCGGGGGAAGCGCGGGGCACGTGCTCGCAGGTGATGAGGTaGGTGGGCAGCGCCTGGGTGTCGTGGAAGATGACGAAGATGCTG +
Preference number: 1 (lower is better)
Translates to: GSSGEARGTCSQVMR*VGSAWVSWKMTKML
Trigger: CAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCTGCGAGCACGTGCCCCGCGCTTCCCCCGACGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 90 bp TCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTCATACTGCTGCTaGAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGATG +
Preference number: 1 (lower is better)
Translates to: SHRCSRRSRYSSYCC*SSGCDTRSTRTTRM
Trigger: CATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 90 bp GCGCGGGGCACGTGCTCGCAGGTGATGAGGTGGGTGGGCAGCGCCTaGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAG +
Preference number: 1 (lower is better)
Translates to: ARGTCSQVMRWVGSA*VSWKMTKMLGWQMQ
Trigger: CTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCTGCGAGCACGTGCCCCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 90 bp ACGTGCTCGCAGGTGATGAGGTGGGTGGGCAGCGCCTGGGTGTCGTaGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCG +
Preference number: 1 (lower is better)
Translates to: TCSQVMRWVGSAWVS*KMTKMLGWQMQSTA
Trigger: CGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCTGCGAGCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCGACGCGGATGCTGCTaGGGGCAGCGTCCAGGGTGT +
Preference number: 2 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDRRGCC*GQRPGC
Trigger: ACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCG...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAAAGCTCATACTGCTGCTaGAGCAGCGGGTGCGACACG +
Preference number: 2 (lower is better)
Translates to: PQTAAALPVVASQHPCHESSYCC*SSGCDT
Trigger: CGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCT...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp CTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAG +
Preference number: 2 (lower is better)
Translates to: LADAVHGAVVAQEHVARTVRHCR*RRAVVQ
Trigger: CTGTACCACGGCACGACGGCACCGGCAGTGCCTGAC...GGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGCGTAGACCGTGGCGTTaGGGCCGCAGAAGCTGCGGT +
Preference number: 2 (lower is better)
Translates to: KQEARGWPLRLSVWGAARRRPWR*GRRSCG
Trigger: ACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACG...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACCACGAACGACGCGGATaGTGCTGCGGGCAGCGTCCA +
Preference number: 2 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYHERRG*CCGQRP
Trigger: TGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTG...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGCGGTACAGCTCATACTaGTGCTGCAGCAGCGGGTGC +
Preference number: 2 (lower is better)
Translates to: KQEARGWPLRLSVWGAARRYSSY*CCSSGC
Trigger: GCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCG...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp TCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGGAACGACGCGGATGCTaGTGCGGGCAGCGTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SWKMTKMLGWQMQSTALSERRGC*CGQRPG
Trigger: CCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTC...CGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGCTGACCCCTGGTGGTaGGGTCGGCCCAGGCTGGGA +
Preference number: 2 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGADPWW*GRPRLG
Trigger: TCCCAGCCTGGGCCGACCCCACCACCAGGGGTCAGC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGGCTCTGCTGACCCCTaGTGGTGGGGTCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGGSADP*WWGRPR
Trigger: CCTGGGCCGACCCCACCACCAGGGGTCAGCAGAGCC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR GCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCTGCTGCAGCAGCGGGTaGGACACGCGCTCCACACGA +
Preference number: 2 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGCCSSG*DTRSTR
Trigger: TCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCA...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR TCA 90 bp TCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGCGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGT +
Preference number: 2 (lower is better)
Translates to: SWKMTKMLGWQMQSTALSRRSCG*SRGRRC
Trigger: ACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCG...CGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp AGGTGGGTGGGCAGCGCCTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCTCCCCGGTGTTCTCTaGCAGACGCTCCAGGTTGTT +
Preference number: 2 (lower is better)
Translates to: RWVGSAWVSWKMTKMLGWLPGVL*QTLQVV
Trigger: AACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAG...CCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR GCA 90 bp GATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGTACAGCTCATACTGCTaGTGCAGCAGCGGGTGCGAC +
Preference number: 2 (lower is better)
Translates to: DDEDAGLADAVHGAVVAQYSSYC*CSSGCD
Trigger: GTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTA...CTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGATCTGCTGACCCCTGGTaGTGGGGTCGGCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRSADPW*WGRPRL
Trigger: CAGCCTGGGCCGACCCCACCACCAGGGGTCAGCAGA...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGGCGGTGTCGCCTCCTaGGCTCTGCTGACCCCTGGT +
Preference number: 2 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRGGVAS*ALLTPG
Trigger: ACCAGGGGTCAGCAGAGCCCAGGAGGCGACACCGCC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTTCAGGCGGCCACAGTTaGGGGCGGGGAGCATCAGCC +
Preference number: 2 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTSGGHS*GRGASA
Trigger: GGCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGA...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR CCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGTCTGCTGACCCCTGGTaGTGGGGTCGGCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTESADPW*WGRPRL
Trigger: CAGCCTGGGCCGACCCCACCACCAGGGGTCAGCAGA...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524918.5
3UTR-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGGGAGCATCAGCCTGTaGGGAGCTGGGAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTGSISL*GAGSLG
Trigger: TCCCAGGCTCCCAGCTCCGCACAGGCTGATGCTCCC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR-3UTR GCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGGGAGCATCAGCCTGTaGGGAGCTGGGAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTGSISL*GAGSLG
Trigger: TCCCAGGCTCCCAGCTCCGCACAGGCTGATGCTCCC...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
3UTR GCA 72 bp GGCACTGCCGGTGCCGTCGTGCCGTGGTACAGCACCTaGTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GTAGAVVPWYST*STGRRSHRCSR
Trigger: CCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR CAA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGCTCAGGCGGCCACAGTaGGGGGCGGGGAGCATCAGC +
Preference number: 3 (lower is better)
Translates to: LTAIPHTAFWSPQREAGALRRPQ*GAGSIS
Trigger: GCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGAG...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR GCA 72 bp GCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTaGCACGAACACCGCCTTATGGCCATCGGCGTTGGG +
Preference number: 3 (lower is better)
Translates to: AAALPVVASQHP*HEHRLMAIGVG
Trigger: CCCAACGCCGATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 72 bp GCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTaGTACAGCACCTGCTCCACCGGGCGCCGCTCGCAT +
Preference number: 3 (lower is better)
Translates to: AQMSGTAGAVVP*YSTCSTGRRSH
Trigger: ATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp GCGACACGCGCTCCACACGAACGACGCGGATGCTGCTaGGGGCAGCGTCCAGGGTGTCGTAGAAGGCCCGCA +
Preference number: 3 (lower is better)
Translates to: ATRAPHERRGCC*GQRPGCRRRPA
Trigger: TGCGGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp GGTGCGACACGCGCTCCACACGAACGACGCGGATGCTaGTGCGGGCAGCGTCCAGGGTGTCGTAGAAGGCCC +
Preference number: 3 (lower is better)
Translates to: GATRAPHERRGC*CGQRPGCRRRP
Trigger: GGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp GCGGGTGCGACACGCGCTCCACACGAACGACGCGGATaGTGCTGCGGGCAGCGTCCAGGGTGTCGTAGAAGG +
Preference number: 3 (lower is better)
Translates to: AGATRAPHERRG*CCGQRPGCRRR
Trigger: CCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 72 bp GTGGCGTTGCGGCCGCAGAAGCTGCGGTTGAAGCCGTaGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTG +
Preference number: 3 (lower is better)
Translates to: VALRPQKLRLKP*AQMSGTAGAVV
Trigger: CACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCAC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 72 bp CCCGTGCCACGAACACCGCCTTATGGCCATCGGCGTTaGGGGGCGAGTAGCGGTCCTGCACCGACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: PVPRTPPYGHRR*GASSGPAPTGR
Trigger: CCTCCCTGTCGGTGCAGGACCGCTACTCGCCCCCCAACGCCGATGGCCATAAGGCGGTGTTCGTGGCACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 72 bp GGGGAAGCGCGGGGCACGTGCTCGCAGGTGATGAGGTaGGTGGGCAGCGCCTGGGTGTCGTGGAAGATGACG +
Preference number: 3 (lower is better)
Translates to: GEARGTCSQVMR*VGSAWVSWKMT
Trigger: CGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCTGCGAGCACGTGCCCCGCGCTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR TCA 72 bp CGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTG +
Preference number: 3 (lower is better)
Translates to: RRPWRCGRRSCG*SRGRRCQALPV
Trigger: CACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp TACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTaGAGCAGGCGCTCCCGGTACAGCTCATACTGCTGC +
Preference number: 3 (lower is better)
Translates to: YSTCSTGRRSHR*SRRSRYSSYCC
Trigger: GCAGCAGTATGAGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp GTTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAGCACCTGCTCCACCGG +
Preference number: 3 (lower is better)
Translates to: VEAVGADVRHCR*RRAVVQHLLHR
Trigger: CCGGTGGAGCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR CCA 72 bp GCGAGTAGCGGTCCTGCACCGACAGGGAGGCGCGCCTaGCGAAATACACGCCCTTCCCGTAGACCGTGGCGT +
Preference number: 3 (lower is better)
Translates to: ASSGPAPTGRRA*RNTRPSRRPWR
Trigger: ACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCGCCTCCCTGTCGGTGCAGGACCGCTACTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR GCA 72 bp TCCCGGTACAGCTCATACTGCTGCTGCAGCAGCGGGTaGGACACGCGCTCCACACGAACGACGCGGATGCTG +
Preference number: 3 (lower is better)
Translates to: SRYSSYCCCSSG*DTRSTRTTRML
Trigger: CAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
3UTR-3UTR CAA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCTCAGGCGGCCACAGTaGGGGGCGGGGAGCATCAGC +
Preference number: 3 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGLRRPQ*GAGSIS
Trigger: GCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGAG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
3UTR CCA 72 bp ACGTGCTCGCAGGTGATGAGGTGGGTGGGCAGCGCCTaGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TCSQVMRWVGSA*VSWKMTKMLGW
Trigger: CCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCTCATCACCTGCGAGCACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCCCGGGTAGGCGTTaGAGGTCCTCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRGPGRR*RSSRGP
Trigger: GGGGCCCCTGGAGGACCTGCAACGCCTACCCGGGCC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCCCGTGGTACAGCACCTaGTCCACCGGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASPWYST*STGRRS
Trigger: CGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGG...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGGGCTCGTGGTGGAGCTaGCCGCAGGCTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGAGSWWS*PQAQLG
Trigger: GCCCAGCTGAGCCTGCGGCCAGCTCCACCACGAGCC...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACAGCGTGCAGGGGCTCGTaGTGGAGCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ADRGGPARSRQSAPVPRTACRGS*WSWPQA
Trigger: AGCCTGCGGCCAGCTCCACCACGAGCCCCTGCACGC...TGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCTCTGCTGACCCCTGGTaGTGGGGTCGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASSADPW*WGRPRL
Trigger: CAGCCTGGGCCGACCCCACCACCAGGGGTCAGCAGA...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCTCTGCTGACCCCTaGTGGTGGGGTCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRGSADP*WWGRPR
Trigger: CCTGGGCCGACCCCACCACCAGGGGTCAGCAGAGCC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAATCCTCTGGCTGCTCCTaGGGCCCTTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHESSGCS*GPSSSS
Trigger: GCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGA...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCCTCCACTGCCACCCCTaGCTCTGCCTCCGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASLHCHP*LCLRHC
Trigger: GCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAG...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACGGCCCGGGTAGGCGTTaGAGGTCCTCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDGPGRR*RSSRGP
Trigger: GGGGCCCCTGGAGGACCTGCAACGCCTACCCGGGCC...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTCTGGCGCTGCCCGGGTaGTCCAGGCACAACACATGG +
Preference number: 4 (lower is better)
Translates to: PAPPGAARIAAAGAPGTALALPG*SRHNTW
Trigger: CCATGTGTTGTGCCTGGAGCACCCGGGCAGCGCCAG...AGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAAACAGGGTGTGGGCGTTaGCAGGGAGCACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHETGCGR*QGALGG
Trigger: CCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGT...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCTCCAGCCACCTGGGTaGCACAGTGCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGLQPPG*HSAGGH
Trigger: GTGGCCCCCAGCACTGTGGCACCCAGGTGGCTGGAG...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASVRHCR*RRAVVQ
Trigger: CTGTACCACGGCACGACGGCACCGGCAGTGCCTGAC...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp AGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: STCSTGRRSHRCSRRSRYVRHCR*RRAVVQ
Trigger: CTGTACCACGGCACGACGGCACCGGCAGTGCCTGAC...GTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCGCAGATGTCAGGCACTaGCGGTGCCGTCGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASADVRH*RCRRAV
Trigger: CACGGCACGACGGCACCGGCAGTGCCTGACATCTGC...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGCGTAGACCGTGGCGTTaGGGCCGCAGAAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGARRPWR*GRRSCG
Trigger: ACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACG...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGTAGCCCTAGGCCCCTaGGTGGACGGGTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRVALGP*VDGWSP
Trigger: AGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTAC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TGGTACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCCAAGCGCTGGGGCGTaGTGCCAGGGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: WYSTCSTGRRSHRCSRRSPSAGA*CQGAVL
Trigger: AAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGG...GGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGAGAAGTGCCACCAAGTaGCGGGCAGCACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGARSATK*RAARAG
Trigger: CCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCT...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp ACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAGAAGGCCCGCCTCCAAGGCAGCCCTaGGCGCCCGGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TNDADAAAGSVQGVVEGPPPRQP*APGPAP
Trigger: AGGAGCTGGACCGGGCGCTCAGGGCTGCCTTGGAGG...CGGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp CAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: QHLLHRAPLASLQQALPVRRSCG*SRGRRC
Trigger: ACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCG...TACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGTCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRSTDLH*HPCLCL
Trigger: GAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGA...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGTCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGSTDLH*HPCLCL
Trigger: GAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGA...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCCTCAGCTCTGAGCCCTaGAACCGGTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASLSSEP*NRCSCC
Trigger: GCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAG...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCCCCTCCTGTTCCTaGAACCCCACAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRGPSCS*NPTGLR
Trigger: CCTGAGGCCTGTGGGGTTGCAGGAACAGGAGGGGCC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGGAACGACGCGGATGCTaGTGCGGGCAGCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLADAVHGAVVAQEHVARERRGC*CGQRPG
Trigger: CCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTC...CCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGTGCTGCAGCAGCGGGTaGGACACGCGCTCCACACGA +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRCCSSG*DTRSTR
Trigger: TCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCA...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGGGCTCGTGGTGGAGCTaGCCGCAGGCTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARGSWWS*PQAQLG
Trigger: GCCCAGCTGAGCCTGCGGCCAGCTCCACCACGAGCC...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp ACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCTCCAAGCGCTaGGGCGTGGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: TAAAAAGATRAPHERRGCCCSKR*GVVPGG
Trigger: GCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCA...GCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCCCGCAGCAAGGCCTaGACATGCTGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRARSKA*TCCSKR
Trigger: GCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TGGTACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCGCCCGCAGCAAGGCCTaGACATGCTGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: WYSTCSTGRRSHRCSRRSARSKA*TCCSKR
Trigger: GCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGC...GGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCAACTCCTCAGCCGCCTaGCAGGAAGCCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASNSSAA*QEAWAP
Trigger: TGGAGCCCAGGCTTCCTGCCAGGCGGCTGAGGAGTT...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TGGTACAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCGGCCTGTGTCCAACGTaGCTGTGGCCAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: WYSTCSTGRRSHRCSRRSGLCPT*LWPGAL
Trigger: CAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCC...GGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGGGTCCACAGGGTGTaGGCGTTGCCAGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRGVHRV*ALPGST
Trigger: AGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASLGPPG*PAVLGP
Trigger: AGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAG...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAAGAGTGCACCACCAGCTaGGCCTTGCCATCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHEECTTS*ALPSVP
Trigger: GGGGACTGATGGCAAGGCCCAGCTGGTGGTGCACTC...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGGTGCCGTCGTGCCGTaGTACAGCACCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGGAVVP*YSTCST
Trigger: GGTGGAGCAGGTGCTGTACCACGGCACGACGGCACC...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTACAGGGAGGCGCGCCTaGCGAAATACACGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAPPGAARIAAAGAPGTATGRRA*RNTRPS
Trigger: GGAAGGGCGTGTATTTCGCCAGGCGCGCCTCCCTGT...AGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTATGGGTGGGCAGCGCCTaGGTGTCGTGGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: QHLLHRAPLASLQQALPVWVGSA*VSWKMT
Trigger: CGTCATCTTCCACGACACCCAGGCGCTGCCCACCCA...TACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCTTCGGTTAAGTGTCTaGGGAGCGGCCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGLRLSV*GAAREP
Trigger: GGGCTCCCGGGCCGCTCCCCAGACACTTAACCGAAG...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCCCATGGGCATCGAGCTaGCTTGCTCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASPWASS*LALPVP
Trigger: TGGGACAGGCAGAGCAAGTCAGCTCGATGCCCATGG...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCCCGACCTTGAGGCTCCAGTaGCCGGTGGAGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ADAVHGAVVAQEHVARTPTLRLQ*PVEGQL
Trigger: CAGCTGGCCCTCCACCGGTCACTGGAGCCTCAAGGT...CGGGGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTGAAGCCGTGGGCGCATCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PVDRGVAAAEAAVEAVGASTDLH*HPCLCL
Trigger: GAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGA...TGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAAGTCCTCAGGAGAGCATaGTTGGTAGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHEVLRRA*LVALGP
Trigger: GGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGAC...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGAGAGAGGCCCCTGACTaGCCTGGTTCCTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGREAPD*PGSSPE
Trigger: CTCTGGCGAGGAACCAGGGCAGTCAGGGGCCTCTCT...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGAGAGAGGTCCCTGACTaGCCTGGTTCCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGAREVPD*PGSWPE
Trigger: CTCTGGCCAGGAACCAGGGCAGTCAGGGACCTCTCT...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACGGTCTCCACTGGGCCTaGAGACCCCACAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDGLHWA*RPHRPQ
Trigger: CTGGGGCCTGTGGGGTCTGCAGGCCCAGTGGAGACC...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACCCACCAGCCCCTCTTaGTCTGGTGAGTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHEPTSPS*SGESMA
Trigger: TGCCATGGACTCACCAGAGCAAGAGGGGCTGGTGGG...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGAGCAAGGCCTGGACATaGTGCTCCAAGCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRSKAWT*CSKRWG
Trigger: GCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCT...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTACTCCAGCCACCTGGGTaGCACAGTGCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ALHTNDADAAAGSVQGVVLQPPG*HSAGGH
Trigger: GTGGCCCCCAGCACTGTGGCACCCAGGTGGCTGGAG...TACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACAGCTTGCTCAAAGGCCGAGTaGACCACCAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PAPPGAARIAAAGAPGTACSKAE*TTSWAL
Trigger: CAAGGCCCAGCTGGTGGTGCACTCGGCCTTTGAGCA...AGCTGTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDASTQL*RQCAAP
Trigger: TGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGC...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGCGACGCGGATGCTGCTaGGGGCAGCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARRRGCC*GQRPGC
Trigger: ACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCG...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGACGCCGCTCGCATCGCTaGAGCAGGCGCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: HTAAAAAGATRAPHERRGRRSHR*SRRSRY
Trigger: GTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCG...TCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGAAGCGCGGGGCACGTaGTCGCAGGTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VRHALHTNDADAAAGSVQEARGT*SQVMRW
Trigger: CCACCTCATCACCTGCGAGCACGTGCCCCGCGCTTC...CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp AGGCGCTCCCGGTACAGCTCATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCGGCCCCTTCAGCGTCTaGCCCGCCAACCATGGCACC +
Preference number: 4 (lower is better)
Translates to: RRSRYSSYCCCSSGCDTRGPFSV*PANHGT
Trigger: GGTGCCATGGTTGGCGGGGCAGACGCTGAAGGGGCC...GCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCGGGAGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCGCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACCTCAGAAAGGGGCTTaGGCAACTGGACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PQTAAALPVVASQHPCHEPQKGA*ATGPEP
Trigger: GGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGG...TTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGGGTCCACAGGGTGTaGGCGTTGCCAGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: VRHALHTNDADAAAGSVQGVHRV*ALPGST
Trigger: AGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCC...CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGTCTCCTCCTGGACGTaGACCTCCAAGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGVSSWT*TSKAAL
Trigger: CAGGGCTGCCTTGGAGGTCCACGTCCAGGAGGAGAC...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGTCGCAGGTGATGAGGTaGGTGGGCAGCGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GLADAVHGAVVAQEHVARSQVMR*VGSAWV
Trigger: CACCCAGGCGCTGCCCACCCACCTCATCACCTGCGA...CCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp ACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGATGCCTGCCCCGCCAACCATaGCACCGCTCCAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: TAAAAAGATRAPHERRGCLPRQP*HRSRRA
Trigger: TGCTCGCCTGGAGCGGTGCCATGGTTGGCGGGGCAG...GCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGCTCCTCTGTACTGTCTaGGGTCCACAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGALLCTV*GPQGVG
Trigger: GCCCACACCCTGTGGACCCCAGACAGTACAGAGGAG...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR TCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGCCAGAGACCCCATGGTaGTCTCCATGGGACCCACCA +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRPETPW*SPWDPP
Trigger: TGGTGGGTCCCATGGAGATCACCATGGGGTCTCTGG...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCAAGACACACTGGAACTaGGCCTCCAGCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASKTHWN*ASSPWR
Trigger: TCTCCAGGGGCTGGAGGCTCAGTTCCAGTGTGTCTT...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGGTGTCGTGGAAGATaGCGAAGATGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRGCRGR*RRCWAG
Trigger: GCCAGCCCAGCATCTTCGTCATCTTCCACGACACCC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGAGCCCTGCAACCGGTaGTCCTGCTGCAACACTCGT +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGREPCNR*SCCNTR
Trigger: ACGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGAGAGAGGTCCCTGACTaGCCTGGTTCCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGREVPD*PGSWPE
Trigger: CTCTGGCCAGGAACCAGGGCAGTCAGGGACCTCTCT...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTGAAGCCGTGGGCGCATCCACCAGGCCCTCCTaGCCCAGCAACCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: PVDRGVAAAEAAVEAVGASTRPS*PSNPLE
Trigger: CTCTAAGGGGTTGCTGGGGCAGGAGGGCCTGGTGGA...TGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCAGGACTCCTGTGCCTaGCCCTCAGCAAGCCTAACC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGQDSCA*PSASLT
Trigger: GGTTAGGCTTGCTGAGGGGCAGGCACAGGAGTCCTG...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGAAGGCCTGGACATGCTaGTCCAAGCGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: VRHALHTNDADAAAGSVQKAWTC*SKRWGV
Trigger: CACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTT...CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp TGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCCCGTGGTACAGCACCTaGTCCACCGGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WRNTRPSRRPWRCGRRSCPWYST*STGRRS
Trigger: CGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGG...GCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGGCAGATGTCAGGCACTaGCGGTGCCGTCGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARADVRH*RCRRAV
Trigger: CACGGCACGACGGCACCGGCAGTGCCTGACATCTGC...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCCCTGGGTGGACGGGTaGTCCCCTCCACTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDPWVDG*SPPLVF
Trigger: GAACACCAGTGGAGGGGACCACCCGTCCACCCAGGG...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGCCTCAGAAAGGGGCTTaGGCAACTGGACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRPQKGA*ATGPEP
Trigger: GGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGG...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCCTCAGAAAGGGGCTTaGGCAACTGGACCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGPQKGA*ATGPEP
Trigger: GGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGG...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGAAGGTGCTGCCCTTCTaGGCCCAGGAGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGKVLPF*AQEKPG
Trigger: GCCAGGTTTCTCCTGGGCCCAGAAGGGCAGCACCTT...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGGTTGCCAGGGAGCACTaGGAGGGCCTCGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARVAREH*EGLGRV
Trigger: GACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAAC...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCAACACTCACACCATaGCACCGCTCCAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRATLTP*HRSRRA
Trigger: TGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp ACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAGAAGGCCCGCTTCGGTTAAGTGTCTaGGGAGCGGCCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TNDADAAAGSVQGVVEGPLRLSV*GAAREP
Trigger: GGGCTCCCGGGCCGCTCCCCAGACACTTAACCGAAG...CGGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGAPCSS*SAWAKT
Trigger: GGTCTTGGCCCAGGCAGATCACGAACTACATGGTGC...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTGAAGCCGTGGGCGCATGCCACCCCTGCCTCTaGCTCCGCCATTGCAACCAT +
Preference number: 4 (lower is better)
Translates to: PVDRGVAAAEAAVEAVGACHPCL*LRHCNH
Trigger: ATGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCA...TGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGACTCGTTCTGCCACTTaGCACTGCTGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGATRSAT*HCWKEA
Trigger: TGCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGT...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp ACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGTCCAACCGGTGCTCCTGCTaGAACACTCGTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TAIPHTAFWSPQREAGASNRCSC*NTRSAT
Trigger: AGTGGCAGAACGAGTGTTGCAGCAGGAGCACCGGTT...GGACGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGAGAGAGGTCCCTGACTaGCCTGGTTCCTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLADAVHGAVVAQEHVARREVPD*PGSWPE
Trigger: CTCTGGCCAGGAACCAGGGCAGTCAGGGACCTCTCT...CCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCGAGCTGACTTGCTCTaGCTGTCCCAGAGACCCCAT +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGRADLL*LSQRPH
Trigger: ATGGGGTCTCTGGGACAGGCAGAGCAAGTCAGCTCG...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCGGCCCCTCCTGTTCCTaGAACCCCACAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AWRNTRPSRRPWRCGRRSGPSCS*NPTGLR
Trigger: CCTGAGGCCTGTGGGGTTGCAGGAACAGGAGGGGCC...GCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACATCTGGGGGCTCTTCTaGCTCCAACGGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDIWGLF*LQRGLL
Trigger: GAGCAGCCCCCGTTGGAGGCAGAAGAGCCCCCAGAT...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGCTCCCCGGTGTTCTCTaGCAGACGCTCCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRLPGVL*QTLQVV
Trigger: AACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAG...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGTACAGCTCATACTGCTaGTGCAGCAGCGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRYSSYC*CSSGCD
Trigger: GTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTA...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CGCGCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGATGCTGGGCTGGCAGATaGAGTCCACGGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RAWRNTRPSRRPWRCGRRCWAGR*SPRRCR
Trigger: ACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCA...TCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCCCGGCCACTTGCCACTGCTaGAAGGAGGCAACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ADAVHGAVVAQEHVARTPATCHC*KEATVP
Trigger: GGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGC...CGGGGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACACAGCAAGGCTGTACTaGGAGCCCCGAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYTARLY*EPRGPQ
Trigger: CTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGT...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CAGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTAATCCGGTCCTTCAAGTaGCAAGAGAGCGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: QHLLHRAPLASLQQALPVIRSFK*QESDVS
Trigger: GGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGAT...TACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GGGCGAGTAGCGGTCCTGCACCGACAGGGAGGCGCGCCTGGCGAAATACACGCCACCACCTGTACTGTCTaGGGTCCACAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GRVAVLHRQGGAPGEIHATTCTV*GPQGVG
Trigger: GCCCACACCCTGTGGACCCCAGACAGTACAGGTGGT...GGCGTGTATTTCGCCAGGCGCGCCTCCCTGTCGGTGCAGGACCGCTACTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGGTTGAAGCCGTGGGCGCACAGGAGGCCAGAGGGTaGCCCCTTCGGTTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PVDRGVAAAEAAVEAVGAQEARG*PLRLSV
Trigger: GACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTG...TGCGCCCACGGCTTCAACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGCCATGGGCATCGAGCTaGCTTGCTCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARPWASS*LALPVP
Trigger: TGGGACAGGCAGAGCAAGTCAGCTCGATGCCCATGG...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGCCCCTCTTGCTCTGGTaGGTCCATGGCAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRPLLLW*VHGNFH
Trigger: GTGGAAATTGCCATGGACTCACCAGAGCAAGAGGGG...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CGCGCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGACCAGAGACCCCATGGTaGTCTCCATGGGACCCACCA +
Preference number: 4 (lower is better)
Translates to: RAWRNTRPSRRPWRCGRRPETPW*SPWDPP
Trigger: TGGTGGGTCCCATGGAGATCACCATGGGGTCTCTGG...TCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp GCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAGGGTGTCGTGGAAGATaGCGAAGATGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALHTNDADAAAGSVQGVVGCRGR*RRCWAG
Trigger: GCCAGCCCAGCATCTTCGTCATCTTCCACGACACCC...TACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGCTGCAACACTCGTTCTaGCACTTGCCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGALQHSF*HLPLLE
Trigger: TTCCAGCAGTGGCAAGTGGCAGAACGAGTGTTGCAG...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGAACCGGTGCTCCTGCTaGAACACTCGTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGNRCSC*NTRSAT
Trigger: AGTGGCAGAACGAGTGTTGCAGCAGGAGCACCGGTT...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GCAGACCGCGGCGGCCCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACAAACCGGTGCTCCTGCTaGAACACTCGTTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ADRGGPARSRQSAPVPRTNRCSC*NTRSAT
Trigger: AGTGGCAGAACGAGTGTTGCAGCAGGAGCACCGGTT...TGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGGGCCGCCGCGGTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGCATTGTCACAGTCCCTaGACCCTGCAGAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: GLADAVHGAVVAQEHVARHCHSP*TLQSRH
Trigger: GTGACGGCTCTGCAGGGTGCAGGGACTGTGACAATG...CCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGATAATCCCTCTACCCTaGACCATGGGACCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LTAIPHTAFWSPQREAGAIIPLP*TMGPVL
Trigger: GAGGACAGGTCCCATGGTGCAGGGTAGAGGGATTAT...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCTGGAACTCCCCGGTGTTCTCTGCCAGACGCTCCAGGTTGTTCCAGGGCCCCTTGGAGCAGCAGGCGTaGAGGGGCTCGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SWNSPVFSARRSRLFQGPLEQQA*RGSWWS
Trigger: GCTCCACCACGAGCCCCTGCACGCCTGCTGCTCCAA...GGGGCCCTGGAACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAGTTCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACAGCAAGGCCTGGACATaGTGCTCCAAGCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYSKAWT*CSKRWG
Trigger: GCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCT...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACCCCTGGAGAAGGTGCTaGCCTTCTGGGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYPWRRC*PSGPRR
Trigger: TCTCCTGGGCCCAGAAGGGCAGCACCTTCTCCAGGG...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp AGGTGGGTGGGCAGCGCCTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGTGCTGCAGCAGCGGGTaGGACACGCGCTCCACACGA +
Preference number: 4 (lower is better)
Translates to: RWVGSAWVSWKMTKMLGWCCSSG*DTRSTR
Trigger: TCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCA...CCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GGGCGAGTAGCGGTCCTGCACCGACAGGGAGGCGCGCCTGGCGAAATACACGCCTACAGCTCATACTGCTaGTGCAGCAGCGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: GRVAVLHRQGGAPGEIHAYSSYC*CSSGCD
Trigger: GTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTA...GGCGTGTATTTCGCCAGGCGCGCCTCCCTGTCGGTGCAGGACCGCTACTCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp TGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCCGTAGACCGTGGCGTTaGGGCCGCAGAAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: WRNTRPSRRPWRCGRRSCRRPWR*GRRSCG
Trigger: ACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACG...GCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACGCCAGTCAGCACCCGTaGCACGAACACCGCCTTATG +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDASQHP*HEHRLM
Trigger: CATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGC...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTCATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCTGCAACCATTCCCCGTaGCCGCTAGGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AHTAAAAAGATRAPHERRCNHSP*PLGSLR
Trigger: CCTGAGGCTGCCTAGCGGCCACGGGGAATGGTTGCA...GCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGGTCCCAGAGACCCCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARVPETP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGGGTCTCTGGGAC...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGCTCTGGTGAGTCCATaGCAATTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AADRHPPHRLLEPAEGGRALVSP*QFPPGP
Trigger: AGGGCCTGGTGGAAATTGCCATGGACTCACCAGAGC...CCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGCTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCTCTGGTGAGTCCATaGCAATTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLTAIPHTAFWSPQREAGALVSP*QFPPGP
Trigger: AGGGCCTGGTGGAAATTGCCATGGACTCACCAGAGC...CCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGGTGGGTGGGCAGCGCCTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGAGGGGCTTGGGCAACTaGACCAGAGCCCGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: RWVGSAWVSWKMTKMLGWRGLGN*TRARSG
Trigger: GCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCT...CCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAGGCGCTGCCCACCCACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACAGCACCTGCAAGGTGCTGCCCTTCTaGGCCCAGGAGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: WAQMSGTAGAVVPWYSTCKVLPF*AQEKPG
Trigger: GCCAGGTTTCTCCTGGGCCCAGAAGGGCAGCACCTT...GCAGGTGCTGTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDCPTWL*PGALSQ
Trigger: TTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACA...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATGGTGCCGTCGTGCCGTaGTACAGCACCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: PARSRQSAPVPRTPPYGHGAVVP*YSTCST
Trigger: GGTGGAGCAGGTGCTGTACCACGGCACGACGGCACC...ATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CGCGCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGACTGCGGTTGAAGCCGTaGGCGCAGATGTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RAWRNTRPSRRPWRCGRRLRLKP*AQMSGT
Trigger: AGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAG...TCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGTATGGCCATCGGCGTTaGGGGGCGAGTAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GEIHALPVDRGVAAAEAAYGHRR*GASSGP
Trigger: AGGACCGCTACTCGCCCCCCAACGCCGATGGCCATA...CGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp CGCGCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: RAWRNTRPSRRPWRCGRRAPCSS*SAWAKT
Trigger: GGTCTTGGCCCAGGCAGATCACGAACTACATGGTGC...TCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp GCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAAAGACACACTGGAACTaGGCCTCCAGCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALHTNDADAAAGSVQGVVKTHWN*ASSPWR
Trigger: TCTCCAGGGGCTGGAGGCTCAGTTCCAGTGTGTCTT...TACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCCTCCAAGGCAGCCCTaGGCGCCCGGTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGPPRQP*APGPAP
Trigger: AGGAGCTGGACCGGGCGCTCAGGGCTGCCTTGGAGG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACTCAGCTCTGAGCCCTaGAACCGGTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRCWAGRCSPRRCRSAGALSSEP*NRCSCC
Trigger: GCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAG...TGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCAAGAGAGGCCCCTGACTaGCCTGGTTCCTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RRCWAGRCSPRRCRSAGAREAPD*PGSSPE
Trigger: CTCTGGCGAGGAACCAGGGCAGTCAGGGGCCTCTCT...TGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCGAGCTGACTTGCTCTaGCTGTCCCAGAGACCCCAT +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDRADLL*LSQRPH
Trigger: ATGGGGTCTCTGGGACAGGCAGAGCAAGTCAGCTCG...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTCCACCAGGCCCTCCTaGCCTGCCAGCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: AWRNTRPSRRPWRCGRRSSTRPS*PASFTH
Trigger: ATGTGTGAAGCTGGCAGGGCAGGAGGGCCTGGTGGA...GCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGCTCCCCGGTGTTCTCTaGCAGACGCTCCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: KQEARGWPLRLSVWGAARLPGVL*QTLQVV
Trigger: AACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAG...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGGTAGCCCTAGGCCCCTaGGTGGACGGGTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SWKMTKMLGWQMQSTALSVALGP*VDGWSP
Trigger: AGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTAC...CGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGCTCTGGTGAGTCCATaGCAATTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VRHALHTNDADAAAGSVQALVSP*QFPPGP
Trigger: AGGGCCTGGTGGAAATTGCCATGGACTCACCAGAGC...CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGGCTCGTGGTGGAGCTaGCCGCAGGCTCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGGSWWS*PQAQLG
Trigger: GCCCAGCTGAGCCTGCGGCCAGCTCCACCACGAGCC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGTGCTGCTCCAAGCGCTaGGGCGTGGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGCCSKR*GVVPGG
Trigger: GCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCA...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp ACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAGAAGGCCCGCAGCTTCACACATCCTaGGCTCACAGGCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TNDADAAAGSVQGVVEGPQLHTS*AHRPCL
Trigger: AAGGCAGGGCCTGTGAGCCCAGGATGTGTGAAGCTG...CGGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CGTAGTCGCCAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATCGGCGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: RSRQSAPVPRTPPYGHRRLGPPG*PAVLGP
Trigger: AGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAG...ACGCCGATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATGTCTCCTCCTGGACGTaGACCTCCAAGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PARSRQSAPVPRTPPYGHVSSWT*TSKAAL
Trigger: CAGGGCTGCCTTGGAGGTCCACGTCCAGGAGGAGAC...ATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TCCTGGAACTCCCCGGTGTTCTCTGCCAGACGCTCCAGGTTGTTCCAGGGCCCCCCCACCGTCTCCTCCTaGACGTGGACCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SWNSPVFSARRSRLFQGPPTVSS*TWTSKA
Trigger: TGCCTTGGAGGTCCACGTCCAGGAGGAGACGGTGGG...GGGGCCCTGGAACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAGTTCCAGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGAACGAAGATGCTGGGCTaGCAGATGCAGTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: HTAAAAAGATRAPHERRGTKMLG*QMQSTA
Trigger: CGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGT...TCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR TCA 90 bp ACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGGGTGTCGTAGAAGGCCCGTTTCAAAGTAGAGAGTaGGCAGCTCGTCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: TNDADAAAGSVQGVVEGPFQSRE*AARRAR
Trigger: CCGTGCCCGACGAGCTGCTCACTCTCTACTTTGAAA...CGGGCCTTCTACGACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGCTGCAACACTCGTTCTaGCACTTGCCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GLADAVHGAVVAQEHVARLQHSF*HLPLLE
Trigger: TTCCAGCAGTGGCAAGTGGCAGAACGAGTGTTGCAG...CCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTCATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCTGCAACCGGTGCTCCTaGTGCAACACTCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AHTAAAAAGATRAPHERRCNRCS*CNTRSA
Trigger: GGCAGAACGAGTGTTGCAGCAGGAGCACCGGTTGCA...GCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCAGAGCCCTGCAACCGGTaGTCCTGCTGCAACACTCGT +
Preference number: 4 (lower is better)
Translates to: RRCWAGRCSPRRCRSAGAEPCNR*SCCNTR
Trigger: ACGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTC...TGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GCTCATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGCATCGAGCTGACTTaGTCTGCCTGTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AHTAAAAAGATRAPHERRGIELT*SACPRD
Trigger: GTCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCC...GCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCACCTGGGTGCCACAGTaGTGGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGTWVPQ*WGPQAP
Trigger: AGGAGCCTGTGGCCCCCAGCACTGTGGCACCCAGGT...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATAGCTCATACTGCTGCTaGAGCAGCGGGTGCGACACG +
Preference number: 4 (lower is better)
Translates to: PARSRQSAPVPRTPPYGHSSYCC*SSGCDT
Trigger: CGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCT...ATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCGCCGCTCGCATCGCTaGAGCAGGCGCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPRRSHR*SRRSRY
Trigger: GTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCTGCCCGTAGTCGCCAGTCAGCACCCGTGCCACGAACACCGCCTTATGGCCATCTTAGAGGTCTCCACTaGGCCTGCAGACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PARSRQSAPVPRTPPYGHLRGLH*ACRPHR
Trigger: CCTGTGGGGTCTGCAGGCCCAGTGGAGACCTCTAAG...ATGGCCATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGCGACTACGGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACAGGCTCACGTCCTCCTaGTCACCACCTGTACTGTCT +
Preference number: 4 (lower is better)
Translates to: AGRCSPRRCRSAGARGQDRLTSS*SPPVLS
Trigger: AGACAGTACAGGTGGTGACCAGGAGGACGTGAGCCT...GTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGCAGCACGGGCAGGGTaGGCCCCGAAGCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRAARAG*APKPRR
Trigger: CCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGGCTGACCCCTGGTGGTaGGGTCGGCCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPADPWW*GRPRLG
Trigger: TCCCAGCCTGGGCCGACCCCACCACCAGGGGTCAGC...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGGGCTCTGCTGACCCCTaGTGGTGGGGTCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPGSADP*WWGRPR
Trigger: CCTGGGCCGACCCCACCACCAGGGGTCAGCAGAGCC...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACCCCCTCTTGCTCTGGTaGGTCCATGGCAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYPLLLW*VHGNFH
Trigger: GTGGAAATTGCCATGGACTCACCAGAGCAAGAGGGG...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGGGCCCGGGTAGGCGTTaGAGGTCCTCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEGPGRR*RSSRGP
Trigger: GGGGCCCCTGGAGGACCTGCAACGCCTACCCGGGCC...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp GGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCTGCGACTCGTTCTGCCACTTaGCACTGCTGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GEIHALPVDRGVAAAEAATRSAT*HCWKEA
Trigger: TGCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGT...CGCAGCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp GATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGACAGTCCCTGCACCCTaGAGAGCCGTCACCAACCCT +
Preference number: 4 (lower is better)
Translates to: DDEDAGLADAVHGAVVAQTVPAP*RAVTNP
Trigger: AGGGTTGGTGACGGCTCTGCAGGGTGCAGGGACTGT...CTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCATAATCCCTCTACCCTaGACCATGGGACCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: LADAVHGAVVAQEHVARTIIPLP*TMGPVL
Trigger: GAGGACAGGTCCCATGGTGCAGGGTAGAGGGATTAT...GGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCCAGGCCCTCCTGCCCTaGCAGCTTCACACATCCTGG +
Preference number: 4 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGQALLP*QLHTSW
Trigger: CCAGGATGTGTGAAGCTGGCAGGGCAGGAGGGCCTG...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCGACGCGGATGCTGCTaGGGGCAGCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPRRGCC*GQRPGC
Trigger: ACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCACGAACGACGCGGATaGTGCTGCGGGCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGHERRG*CCGQRP
Trigger: TGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCGCCGCTCGCATCGCTaGAGCAGGCGCTCCCGGTAC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGERRSHR*SRRSRY
Trigger: GTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCCCTGGGTGGACGGGTaGTCCCCTCCACTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGPWVDG*SPPLVF
Trigger: GAACACCAGTGGAGGGGACCACCCGTCCACCCAGGG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCGTGCAGGGGCTCGTaGTGGAGCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGACRGS*WSWPQA
Trigger: AGCCTGCGGCCAGCTCCACCACGAGCCCCTGCACGC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGATGCTGCTCCAAGCGCTaGGGCGTGGTGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRCCSKR*GVVPGG
Trigger: GCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCA...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGCCCGCAGCAAGGCCTaGACATGCTGCTCCAAGCGC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGARSKA*TCCSKR
Trigger: GCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCAACTCCTCAGCCGCCTaGCAGGAAGCCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGNSSAA*QEAWAP
Trigger: TGGAGCCCAGGCTTCCTGCCAGGCGGCTGAGGAGTT...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TTGAAGCCGTGGGCGCAGATGTCAGGCACTGCCGGTGCCGTCGTGCCGTGGTACTCCAGGCACAACACATaGCAGCTAATGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LKPWAQMSGTAGAVVPWYSRHNT*QLMLPS
Trigger: GCTGGGCAGCATTAGCTGCCATGTGTTGTGCCTGGA...GTACCACGGCACGACGGCACCGGCAGTGCCTGACATCTGCGCCCACGGCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGGCCTGTGTCCAACGTaGCTGTGGCCAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGGLCPT*LWPGAL
Trigger: CAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGGGGTCCACAGGGTGTaGGCGTTGCCAGGGAGCACT +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGGVHRV*ALPGST
Trigger: AGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGCAGCACGGGCAGGGTaGGCCCCGAAGCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTAARAG*APKPRR
Trigger: CCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GCTCATACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCAGCGCCTGGGTGTCGTaGAAGATGACGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AHTAAAAAGATRAPHERRSAWVS*KMTKML
Trigger: CAGCATCTTCGTCATCTTCCACGACACCCAGGCGCT...GCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGTCGCAGGTGATGAGGTaGGTGGGCAGCGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGSQVMR*VGSAWV
Trigger: CACCCAGGCGCTGCCCACCCACCTCATCACCTGCGA...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGAAGGCCTGGACATGCTaGTCCAAGCGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGKAWTC*SKRWGV
Trigger: CACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTT...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCAGGCCCTCCTGCCCTaGCAGCTTCACACATCCTGG +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGQALLP*QLHTSW
Trigger: CCAGGATGTGTGAAGCTGGCAGGGCAGGAGGGCCTG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACCTGGGTGCCACAGTaGTGGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPTWVPQ*WGPQAP
Trigger: AGGAGCCTGTGGCCCCCAGCACTGTGGCACCCAGGT...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGATCTGGGGGCTCTTCTaGCTCCAACGGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGIWGLF*LQRGLL
Trigger: GAGCAGCCCCCGTTGGAGGCAGAAGAGCCCCCAGAT...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGGGGCCAGCCAGAAGTaGCACCAAGTGGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGGASQK*HQVAGS
Trigger: GCTGCCCGCCACTTGGTGGCACTTCTGGCTGGCCCC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGGGGCCAGCCAGAAGTaGCACCAAGTGGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGGASQK*HQVAGS
Trigger: GCTGCCCGCCACTTGGTGGCACTTCTGGCTGGCCCC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGGCCCCTTCAGCGTCTaGCCCGCCAAGGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEGPFSV*PAKVGP
Trigger: AGGCCCTACCTTGGCGGGGCAGACGCTGAAGGGGCC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGACGCGGATGCTGCTaGGGGCAGCGTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGRRGCC*GQRPGC
Trigger: ACACCCTGGACGCTGCCCGCAGCAGCATCCGCGTCG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGAACGACGCGGATGCTaGTGCGGGCAGCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEERRGC*CGQRPG
Trigger: CCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCCGGTACAGCTCATACTaGTGCTGCAGCAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGRYSSY*CCSSGC
Trigger: GCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCG...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCGTAGACCGTGGCGTTaGGGCCGCAGAAGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPRRPWR*GRRSCG
Trigger: ACCGCAGCTTCTGCGGCCGCAACGCCACGGTCTACG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGGGGAGCATCAGCCTGTaGGGAGCTGGGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPGSISL*GAGSLG
Trigger: TCCCAGGCTCCCAGCTCCGCACAGGCTGATGCTCCC...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCGCTGTCGGGTGGTCCCCTCCACTaGTGTTCTCAGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWKMTKMLGWQMQSTALSGGPLH*CSQPAP
Trigger: AGGAGCTGGCTGAGAACACCAGTGGAGGGGACCACC...CGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGTAGCCCTAGGCCCCTaGGTGGACGGGTGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRVALGP*VDGWSP
Trigger: AGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTAC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGTGCAGGGGCTCGTaGTGGAGCTGGCCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRACRGS*WSWPQA
Trigger: AGCCTGCGGCCAGCTCCACCACGAGCCCCTGCACGC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGCCAAGCGCTGGGGCGTaGTGCCAGGGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGPSAGA*CQGAVL
Trigger: AAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGG...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGAGTGCACCACCAGCTaGGCCTTGCCATCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGECTTS*ALPSVP
Trigger: GGGGACTGATGGCAAGGCCCAGCTGGTGGTGCACTC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGTATGGCCATCGGCGTTaGGGGGCGAGTAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGYGHRR*GASSGP
Trigger: AGGACCGCTACTCGCCCCCCAACGCCGATGGCCATA...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCTGACCCCTGGTGGTaGGGTCGGCCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGADPWW*GRPRLG
Trigger: TCCCAGCCTGGGCCGACCCCACCACCAGGGGTCAGC...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTGGCGGTGTCGCCTCCTaGGCTCTGCTGACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGGGVAS*ALLTPG
Trigger: ACCAGGGGTCAGCAGAGCCCAGGAGGCGACACCGCC...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGGCGGTGTCGCCTCCTaGGCTCTGCTGACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGGGVAS*ALLTPG
Trigger: ACCAGGGGTCAGCAGAGCCCAGGAGGCGACACCGCC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTTCCTCTGGCTGCTCCTaGGGCCCTTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGSSGCS*GPSSSS
Trigger: GCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGA...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGGCCCCTCCTGTTCCTaGAACCCCACAGGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRGPSCS*NPTGLR
Trigger: CCTGAGGCCTGTGGGGTTGCAGGAACAGGAGGGGCC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGGTCTCCACTGGGCCTaGAGACCCCACAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTGLHWA*RPHRPQ
Trigger: CTGGGGCCTGTGGGGTCTGCAGGCCCAGTGGAGACC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGCAAGGCCTGGACATaGTGCTCCAAGCGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPSKAWT*CSKRWG
Trigger: GCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCT...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACAGGGTGTGGGCGTTaGCAGGGAGCACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGTGCGR*QGALGG
Trigger: CCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGT...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGACAGGGTGTGGGCGTTaGCAGGGAGCACTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGTGCGR*QGALGG
Trigger: CCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGT...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGCTCCAGCCACCTGGGTaGCACAGTGCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRLQPPG*HSAGGH
Trigger: GTGGCCCCCAGCACTGTGGCACCCAGGTGGCTGGAG...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTASTQL*RQCAAP
Trigger: TGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGASTQL*RQCAAP
Trigger: TGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGC...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCCCCTTCAGCGTCTaGCCCGCCAAGGTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRGPFSV*PAKVGP
Trigger: AGGCCCTACCTTGGCGGGGCAGACGCTGAAGGGGCC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGAACGACGCGGATGCTaGTGCGGGCAGCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRERRGC*CGQRPG
Trigger: CCCTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACACGAACGACGCGGATaGTGCTGCGGGCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRHERRG*CCGQRP
Trigger: TGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTTGCTGCAGCAGCGGGTaGGACACGCGCTCCACACGA +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGCCSSG*DTRSTR
Trigger: TCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCA...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCGGTACAGCTCATACTaGTGCTGCAGCAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGRYSSY*CCSSGC
Trigger: GCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACACCGTGGTACAGCACCTaGTCCACCGGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTPWYST*STGRRS
Trigger: CGAGCGGCGCCCGGTGGAGCAGGTGCTGTACCACGG...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGTCAGGCACTGCCGGTaGCGTCGTGCCGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRVRHCR*RRAVVQ
Trigger: CTGTACCACGGCACGACGGCACCGGCAGTGCCTGAC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGCCAGTCAGCACCCGTaGCACGAACACCGCCTTATG +
Preference number: 4 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGASQHP*HEHRLM
Trigger: CATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGAAGCGCGGGGCACGTaGTCGCAGGTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGEARGT*SQVMRW
Trigger: CCACCTCATCACCTGCGAGCACGTGCCCCGCGCTTC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAGGGAGCATCAGCCTGTaGGGAGCTGGGAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRGSISL*GAGSLG
Trigger: TCCCAGGCTCCCAGCTCCGCACAGGCTGATGCTCCC...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCCCTGGGTGGACGGGTaGTCCCCTCCACTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEPWVDG*SPPLVF
Trigger: GAACACCAGTGGAGGGGACCACCCGTCCACCCAGGG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CTGGGTGTCGTGGAAGATGACGAAGATGCTGGGCTGGCAGATGCAGTCCACGGCCTCTACCCTGCACCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LGVVEDDEDAGLADAVHGLYPAP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGTGCAGGGTAGAG...GCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGTCATCTTCCACGACACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACCAAGCGCTGGGGCGTaGTGCCAGGGGGCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGPSAGA*CQGAVL
Trigger: AAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTACAGCAAGGCTGTACTaGGAGCCCCGAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGTARLY*EPRGPQ
Trigger: CTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGT...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAAGGGGCTTGGGCAACTaGACCAGAGCCCGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRRGLGN*TRARSG
Trigger: GCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTTGCCAGGGAGCACTaGGAGGGCCTCGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEVAREH*EGLGRV
Trigger: GACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAAC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCCCACCGTCTCCTCCTaGACGTGGACCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPPTVSS*TWTSKA
Trigger: TGCCTTGGAGGTCCACGTCCAGGAGGAGACGGTGGG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCGAAGCCACGGAGGATaGTGCAGTCACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPRSHGG*CSHHAG
Trigger: CCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGATCAGGCGGCCACAGTTaGGGGCGGGGAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGSGGHS*GRGASA
Trigger: GGCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGA...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGATCTGCTGACCCCTGGTaGTGGGGTCGGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGSADPW*WGRPRL
Trigger: CAGCCTGGGCCGACCCCACCACCAGGGGTCAGCAGA...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGTCCTCTGGCTGCTCCTaGGGCCCTTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRSSGCS*GPSSSS
Trigger: GCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGA...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGACCTTGAGGCTCCAGTaGCCGGTGGAGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRTLRLQ*PVEGQL
Trigger: CAGCTGGCCCTCCACCGGTCACTGGAGCCTCAAGGT...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTACCTTGAGGCTCCAGTaGCCGGTGGAGGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTTLRLQ*PVEGQL
Trigger: CAGCTGGCCCTCCACCGGTCACTGGAGCCTCAAGGT...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGRRSCG*SRGRRC
Trigger: ACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCG...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGTGCCACCCCTGCCTCTaGCTCCGCCATTGCAACCAT +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPCHPCL*LRHCNH
Trigger: ATGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCA...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCTCAGCTCTGAGCCCTaGAACCGGTGCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGELSSEP*NRCSCC
Trigger: GCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACAGTCCCTGCACCCTaGAGAGCCGTCACCAACCCT +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPTVPAP*RAVTNP
Trigger: AGGGTTGGTGACGGCTCTGCAGGGTGCAGGGACTGT...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAAGAGAGGCCCCTGACTaGCCTGGTTCCTCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRREAPD*PGSSPE
Trigger: CTCTGGCGAGGAACCAGGGCAGTCAGGGGCCTCTCT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGATCCACCAGGCCCTCCTaGCCCAGCAACCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRSTRPS*PSNPLE
Trigger: CTCTAAGGGGTTGCTGGGGCAGGAGGGCCTGGTGGA...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCCCACCAGCCCCTCTTaGTCTGGTGAGTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPPTSPS*SGESMA
Trigger: TGCCATGGACTCACCAGAGCAAGAGGGGCTGGTGGG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGATTGGAGCAGCAGGCGTaGAGGGGCTCGTGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRLEQQA*RGSWWS
Trigger: GCTCCACCACGAGCCCCTGCACGCCTGCTGCTCCAA...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGAAGGCCTGGACATGCTaGTCCAAGCGCTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEKAWTC*SKRWGV
Trigger: CACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTT...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACAGGCCCTCCTGCCCTaGCAGCTTCACACATCCTGG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRQALLP*QLHTSW
Trigger: CCAGGATGTGTGAAGCTGGCAGGGCAGGAGGGCCTG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCTGGCGCTGCCCGGGTaGTCCAGGCACAACACATGG +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTLALPG*SRHNTW
Trigger: CCATGTGTTGTGCCTGGAGCACCCGGGCAGCGCCAG...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACTGGCGCTGCCCGGGTaGTCCAGGCACAACACATGG +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGLALPG*SRHNTW
Trigger: CCATGTGTTGTGCCTGGAGCACCCGGGCAGCGCCAG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGACCTGGGTGCCACAGTaGTGGGGGCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTETWVPQ*WGPQAP
Trigger: AGGAGCCTGTGGCCCCCAGCACTGTGGCACCCAGGT...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCAGATGTCAGGCACTaGCGGTGCCGTCGTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRADVRH*RCRRAV
Trigger: CACGGCACGACGGCACCGGCAGTGCCTGACATCTGC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGAAGCGCGGGGCACGTaGTCGCAGGTGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGEARGT*SQVMRW
Trigger: CCACCTCATCACCTGCGAGCACGTGCCCCGCGCTTC...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAACAGCAAGGCTGTACTaGGAGCCCCGAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRTARLY*EPRGPQ
Trigger: CTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGT...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGAGGGGCTTGGGCAACTaGACCAGAGCCCGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRRGLGN*TRARSG
Trigger: GCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCT...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGAACTCCTCAGCCGCCTaGCAGGAAGCCTGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGNSSAA*QEAWAP
Trigger: TGGAGCCCAGGCTTCCTGCCAGGCGGCTGAGGAGTT...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCCTGTGTCCAACGTaGCTGTGGCCAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRGLCPT*LWPGAL
Trigger: CAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGTTGCCAGGGAGCACTaGGAGGGCCTCGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRVAREH*EGLGRV
Trigger: GACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAAC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGTCTCCTCCTGGACGTaGACCTCCAAGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGVSSWT*TSKAAL
Trigger: CAGGGCTGCCTTGGAGGTCCACGTCCAGGAGGAGAC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGCCCACCGTCTCCTCCTaGACGTGGACCTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGPTVSS*TWTSKA
Trigger: TGCCTTGGAGGTCCACGTCCAGGAGGAGACGGTGGG...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACGAAGCCACGGAGGATaGTGCAGTCACCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRRSHGG*CSHHAG
Trigger: CCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGAGAAGTGCCACCAAGTaGCGGGCAGCACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTERSATK*RAARAG
Trigger: CCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCT...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGGGTGCCGTCGTGCCGTaGTACAGCACCTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEGAVVP*YSTCST
Trigger: GGTGGAGCAGGTGCTGTACCACGGCACGACGGCACC...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAACAGGGAGGCGCGCCTaGCGAAATACACGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRTGRRA*RNTRPS
Trigger: GGAAGGGCGTGTATTTCGCCAGGCGCGCCTCCCTGT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGACAGGGAGGCGCGCCTaGCGAAATACACGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGETGRRA*RNTRPS
Trigger: GGAAGGGCGTGTATTTCGCCAGGCGCGCCTCCCTGT...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGTATGGCCATCGGCGTTaGGGGGCGAGTAGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEYGHRR*GASSGP
Trigger: AGGACCGCTACTCGCCCCCCAACGCCGATGGCCATA...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACTTCGGTTAAGTGTCTaGGGAGCGGCCCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGLRLSV*GAAREP
Trigger: GGGCTCCCGGGCCGCTCCCCAGACACTTAACCGAAG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACATCAGGCGGCCACAGTTaGGGGCGGGGAGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTSGGHS*GRGASA
Trigger: GGCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGA...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR TCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGACAAGGCTCAGCTCTaGGCCCTGCAACCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRDKAQL*ALQPVL
Trigger: GAGCACCGGTTGCAGGGCTCAGAGCTGAGCCTTGTC...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGGAAAGGCCAAACTCTaGTCCCAGGGGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGGKAKL*SQGPAR
Trigger: TCTGGCTGGCCCCTGGGATCAGAGTTTGGCCTTTCC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGACGCAGAAGCTGCGGTTaGAGCCGTGGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRRRSCG*SRGRRC
Trigger: ACATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCG...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACACTCCACTGCCACCCCTaGCTCTGCCTCCGCCATTGC +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTLHCHP*LCLRHC
Trigger: GCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAG...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCCTCAGGAGAGCATaGTTGGTAGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEVLRRA*LVALGP
Trigger: GGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGAC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCATTGTCACAGTCCCTaGACCCTGCAGAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPHCHSP*TLQSRH
Trigger: GTGACGGCTCTGCAGGGTGCAGGGACTGTGACAATG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGTCCACCAGGCCCTCCTaGCCCAGCAACCCCTTAGAG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRSTRPS*PSNPLE
Trigger: CTCTAAGGGGTTGCTGGGGCAGGAGGGCCTGGTGGA...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGTCCACCAGGCCCTCCTaGCCTGCCAGCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGSTRPS*PASFTH
Trigger: ATGTGTGAAGCTGGCAGGGCAGGAGGGCCTGGTGGA...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGTCCACCAGGCCCTCCTaGCCTGCCAGCTTCACACAT +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGSTRPS*PASFTH
Trigger: ATGTGTGAAGCTGGCAGGGCAGGAGGGCCTGGTGGA...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCCCTGGAGAAGGTGCTaGCCTTCTGGGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTPWRRC*PSGPRR
Trigger: TCTCCTGGGCCCAGAAGGGCAGCACCTTCTCCAGGG...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAATCTGGGGGCTCTTCTaGCTCCAACGGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGIWGLF*LQRGLL
Trigger: GAGCAGCCCCCGTTGGAGGCAGAAGAGCCCCCAGAT...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGTGCTCAAAGGCCGAGTaGACCACCAGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGECSKAE*TTSWAL
Trigger: CAAGGCCCAGCTGGTGGTGCACTCGGCCTTTGAGCA...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGAGCTCATACTGCTGCTaGAGCAGCGGGTGCGACACG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGSSYCC*SSGCDT
Trigger: CGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCT...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACGGTACAGCTCATACTaGTGCTGCAGCAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRRYSSY*CCSSGC
Trigger: GCACCCGCTGCTGCAGCAGCAGTATGAGCTGTACCG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGATGCTGGGCTGGCAGATaGAGTCCACGGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRCWAGR*SPRRCR
Trigger: ACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCA...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGTGCTGGGCTGGCAGATaGAGTCCACGGCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTECWAGR*SPRRCR
Trigger: ACGACAGCGCCGTGGACTGCATCTGCCAGCCCAGCA...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGATGCAACCATTCCCCGTaGCCGCTAGGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGCNHSP*PLGSLR
Trigger: CCTGAGGCTGCCTAGCGGCCACGGGGAATGGTTGCA...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGTGCAACCATTCCCCGTaGCCGCTAGGCAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRCNHSP*PLGSLR
Trigger: CCTGAGGCTGCCTAGCGGCCACGGGGAATGGTTGCA...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGTCCAGGCCCAGATTCTaGGCCTGCTCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGESRPRF*ACSSRT
Trigger: TGTCCTGGAGGAGCAGGCCCAGAATCTGGGCCTGGA...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGCCACTTGCCACTGCTaGAAGGAGGCAACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGATCHC*KEATVP
Trigger: GGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCCACTTGCCACTGCTaGAAGGAGGCAACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGATCHC*KEATVP
Trigger: GGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGGGTGGTCCCCTCCACTaGTGTTCTCAGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGGGPLH*CSQPAP
Trigger: AGGAGCTGGCTGAGAACACCAGTGGAGGGGACCACC...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGGTGGTCCCCTCCACTaGTGTTCTCAGCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGGGPLH*CSQPAP
Trigger: AGGAGCTGGCTGAGAACACCAGTGGAGGGGACCACC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCTCTACCCTGCACCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPLYPAP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGTGCAGGGTAGAG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTGTCCCAGAGACCCCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGVPETP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGGGTCTCTGGGAC...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTTAGAGGTCTCCACTaGGCCTGCAGACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGLRGLH*ACRPHR
Trigger: CCTGTGGGGTCTGCAGGCCCAGTGGAGACCTCTAAG...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCTTAGAGGTCTCCACTaGGCCTGCAGACCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGLRGLH*ACRPHR
Trigger: CCTGTGGGGTCTGCAGGCCCAGTGGAGACCTCTAAG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAAAGGTGCTGCCCTTCTaGGCCCAGGAGAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRKVLPF*AQEKPG
Trigger: GCCAGGTTTCTCCTGGGCCCAGAAGGGCAGCACCTT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGECPTWL*PGALSQ
Trigger: TTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACA...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTACCACCTGTACTGTCTaGGGTCCACAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGTTCTV*GPQGVG
Trigger: GCCCACACCCTGTGGACCCCAGACAGTACAGGTGGT...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313028.12
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCT +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTLGPPG*PAVLGP
Trigger: AGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAG...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCAACACTCACACCATaGCACCGCTCCAGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGATLTP*HRSRRA
Trigger: TGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGC...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGCGGTTGAAGCCGTaGGCGCAGATGTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGLRLKP*AQMSGT
Trigger: AGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAG...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGTGGGTGGGCAGCGCCTaGGTGTCGTGGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRWVGSA*VSWKMT
Trigger: CGTCATCTTCCACGACACCCAGGCGCTGCCCACCCA...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGATGGGTGGGCAGCGCCTaGGTGTCGTGGAAGATGACG +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRWVGSA*VSWKMT
Trigger: CGTCATCTTCCACGACACCCAGGCGCTGCCCACCCA...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACATCGCAGGTGATGAGGTaGGTGGGCAGCGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTSQVMR*VGSAWV
Trigger: CACCCAGGCGCTGCCCACCCACCTCATCACCTGCGA...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACAGGAGGCCAGAGGGTaGCCCCTTCGGTTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRQEARG*PLRLSV
Trigger: GACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGTTTCAAAGTAGAGAGTaGGCAGCTCGTCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPFQSRE*AARRAR
Trigger: CCGTGCCCGACGAGCTGCTCACTCTCTACTTTGAAA...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGACAAGGCTCAGCTCTaGGCCCTGCAACCGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTDKAQL*ALQPVL
Trigger: GAGCACCGGTTGCAGGGCTCAGAGCTGAGCCTTGTC...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR TCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACCATGGGCATCGAGCTaGCTTGCTCTGCCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGPWASS*LALPVP
Trigger: TGGGACAGGCAGAGCAAGTCAGCTCGATGCCCATGG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACCAGAGACCCCATGGTaGTCTCCATGGGACCCACCA +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGPETPW*SPWDPP
Trigger: TGGTGGGTCCCATGGAGATCACCATGGGGTCTCTGG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAAAGACACACTGGAACTaGGCCTCCAGCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRKTHWN*ASSPWR
Trigger: TCTCCAGGGGCTGGAGGCTCAGTTCCAGTGTGTCTT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGGTGTCGTGGAAGATaGCGAAGATGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRGCRGR*RRCWAG
Trigger: GCCAGCCCAGCATCTTCGTCATCTTCCACGACACCC...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGATGCCACCCCTGCCTCTaGCTCCGCCATTGCAACCAT +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRCHPCL*LRHCNH
Trigger: ATGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCA...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGTGCAACCGGTGCTCCTaGTGCAACACTCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGCNRCS*CNTRSA
Trigger: GGCAGAACGAGTGTTGCAGCAGGAGCACCGGTTGCA...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGAGCCCTGCAACCGGTaGTCCTGCTGCAACACTCGT +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTREPCNR*SCCNTR
Trigger: ACGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGTCCTCAGGAGAGCATaGTTGGTAGCCCTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRVLRRA*LVALGP
Trigger: GGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGAC...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTACAGTCCCTGCACCCTaGAGAGCCGTCACCAACCCT +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTTVPAP*RAVTNP
Trigger: AGGGTTGGTGACGGCTCTGCAGGGTGCAGGGACTGT...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCATTGTCACAGTCCCTaGACCCTGCAGAGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGHCHSP*TLQSRH
Trigger: GTGACGGCTCTGCAGGGTGCAGGGACTGTGACAATG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGGCATCGAGCTGACTTaGTCTGCCTGTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEGIELT*SACPRD
Trigger: GTCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGCCCACCAGCCCCTCTTaGTCTGGTGAGTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRPTSPS*SGESMA
Trigger: TGCCATGGACTCACCAGAGCAAGAGGGGCTGGTGGG...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCAGGACTCCTGTGCCTaGCCCTCAGCAAGCCTAACC +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEQDSCA*PSASLT
Trigger: GGTTAGGCTTGCTGAGGGGCAGGCACAGGAGTCCTG...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAAGCCACGGAGGATGGTaGAGTCACCACGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRSHGGW*SHHAGQ
Trigger: TTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCT...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTAGCCACGGAGGATGGTaGAGTCACCACGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTSHGGW*SHHAGQ
Trigger: TTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCT...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCTCCCCGGTGTTCTCTaGCAGACGCTCCAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGELPGVL*QTLQVV
Trigger: AACAACCTGGAGCGTCTGGCAGAGAACACCGGGGAG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAAGCTCATACTGCTGCTaGAGCAGCGGGTGCGACACG +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRSSYCC*SSGCDT
Trigger: CGTGTCGCACCCGCTGCTGCAGCAGCAGTATGAGCT...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTTACAGCTCATACTGCTaGTGCAGCAGCGGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGYSSYC*CSSGCD
Trigger: GTCGCACCCGCTGCTGCAGCAGCAGTATGAGCTGTA...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGGCCAGTCAGCACCCGTaGCACGAACACCGCCTTATG +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEASQHP*HEHRLM
Trigger: CATAAGGCGGTGTTCGTGGCACGGGTGCTGACTGGC...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTTCCAGGCCCAGATTCTaGGCCTGCTCCTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTSRPRF*ACSSRT
Trigger: TGTCCTGGAGGAGCAGGCCCAGAATCTGGGCCTGGA...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCTCTACCCTGCACCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGLYPAP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGTGCAGGGTAGAG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGTCCCAGAGACCCCATaGGACCTGTCCTCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRVPETP*DLSSER
Trigger: CCTCTCTGAGGACAGGTCCCATGGGGTCTCTGGGAC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCAGCTTCACACATCCTaGGCTCACAGGCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEQLHTS*AHRPCL
Trigger: AAGGCAGGGCCTGTGAGCCCAGGATGTGTGAAGCTG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCAGCTTCACACATCCTaGGCTCACAGGCCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGQLHTS*AHRPCL
Trigger: AAGGCAGGGCCTGTGAGCCCAGGATGTGTGAAGCTG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTCPTWL*PGALSQ
Trigger: TTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACA...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGTGCACCACCAGCTaGGCCTTGCCATCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTECTTS*ALPSVP
Trigger: GGGGACTGATGGCAAGGCCCAGCTGGTGGTGCACTC...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACTGCGGTTGAAGCCGTaGGCGCAGATGTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGLRLKP*AQMSGT
Trigger: AGTGCCTGACATCTGCGCCCACGGCTTCAACCGCAG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTACGAAGATGCTGGGCTaGCAGATGCAGTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTTKMLG*QMQSTA
Trigger: CGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGT...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCAGGAGGCCAGAGGGTaGCCCCTTCGGTTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEQEARG*PLRLSV
Trigger: GACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTG...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR TCA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGTTTCAAAGTAGAGAGTaGGCAGCTCGTCGGGCACGG +
Preference number: 4 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGFQSRE*AARRAR
Trigger: CCGTGCCCGACGAGCTGCTCACTCTCTACTTTGAAA...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp GTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: VPGSLPPGFTFTFIQTTEAPCSS*SAWAKT
Trigger: GGTCTTGGCCCAGGCAGATCACGAACTACATGGTGC...CTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR TCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGGAAAGGCCAAACTCTaGTCCCAGGGGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTGKAKL*SQGPAR
Trigger: TCTGGCTGGCCCCTGGGATCAGAGTTTGGCCTTTCC...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGATGCAACCGGTGCTCCTaGTGCAACACTCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGCNRCS*CNTRSA
Trigger: GGCAGAACGAGTGTTGCAGCAGGAGCACCGGTTGCA...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACGAGCTGACTTGCTCTaGCTGTCCCAGAGACCCCAT +
Preference number: 4 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGRADLL*LSQRPH
Trigger: ATGGGGTCTCTGGGACAGGCAGAGCAAGTCAGCTCG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGCATCGAGCTGACTTaGTCTGCCTGTCCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRGIELT*SACPRD
Trigger: GTCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGAATCCGGTCCTTCAAGTaGCAAGAGAGCGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRIRSFK*QESDVS
Trigger: GGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGAT...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAACGAAGATGCTGGGCTaGCAGATGCAGTCCACGGCG +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTTKMLG*QMQSTA
Trigger: CGCCGTGGACTGCATCTGCCAGCCCAGCATCTTCGT...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGCCTGGGTGTCGTaGAAGATGACGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGSAWVS*KMTKML
Trigger: CAGCATCTTCGTCATCTTCCACGACACCCAGGCGCT...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp CCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACGGGTCCCTTCCGCCTaGGTTCACGTTCACGTTTAT +
Preference number: 4 (lower is better)
Translates to: PGPFRLGSRSRLFKQQSRRVPSA*VHVHVY
Trigger: ATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCG...TCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR TCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGACCCCTCTTGCTCTGGTaGGTCCATGGCAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRPLLLW*VHGNFH
Trigger: GTGGAAATTGCCATGGACTCACCAGAGCAAGAGGGG...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGACTCGTTCTGCCACTTaGCACTGCTGGAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRTRSAT*HCWKEA
Trigger: TGCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGT...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCTGCAACACTCGTTCTaGCACTTGCCACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAWVHVHVYSNNRADSGELQHSF*HLPLLE
Trigger: TTCCAGCAGTGGCAAGTGGCAGAACGAGTGTTGCAG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR GCA 90 bp GGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGATAATCCCTCTACCCTaGACCATGGGACCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GFTFTFIQTTEPTRARSGIIPLP*TMGPVL
Trigger: GAGGACAGGTCCCATGGTGCAGGGTAGAGGGATTAT...CCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTATCCGGTCCTTCAAGTaGCAAGAGAGCGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTIRSFK*QESDVS
Trigger: GGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGAT...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGATCCAGGCACAACACATaGCAGCTAATGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRSRHNT*QLMLPS
Trigger: GCTGGGCAGCATTAGCTGCCATGTGTTGTGCCTGGA...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp TTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAAGGCTCACGTCCTCCTaGTCACCACCTGTACTGTCT +
Preference number: 4 (lower is better)
Translates to: FRLGSRSRLFKQQSRLGRRLTSS*SPPVLS
Trigger: AGACAGTACAGGTGGTGACCAGGAGGACGTGAGCCT...TCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313028.12
CDS-3UTR CCA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGCGGGTCCCTTCCGCCTaGGTTCACGTTCACGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRRVPSA*VHVHVY
Trigger: ATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCG...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CCA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACATCCAGGCACAACACATaGCAGCTAATGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTSRHNT*QLMLPS
Trigger: GCTGGGCAGCATTAGCTGCCATGTGTTGTGCCTGGA...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS GCA 90 bp GAGCAGCTCGTCGGGCACGGCAGGGGGCAGTCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTCCGCCATTGCAACCCTGGGACGGGG +
Preference number: 5 (lower is better)
Translates to: EQLVGHGRGQSTDLH*HPCLCLRHCNPGTG
Trigger: CCCCGTCCCAGGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGACTGCCCCCTGCCGTGCCCGACGAGCTGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525773.5
CDS GCA 90 bp TCTGCCCCGCCAACCATGGCACCGCTCCAGGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCAGGGCCCCACCGTCTCCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: SAPPTMAPLQASTQL*RQCAAPGPHRLLLD
Trigger: GTCCAGGAGGAGACGGTGGGGCCCTGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTTGGCGGGGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS TCA 90 bp CCCACCCGGGAGACGCCGGCAGCGGCGCAGGCCTCCGGTTGCTTGTaGGAAACGACCCAAGCCCCAAATCCCGAGGCTGGCGGTCGTCCC +
Preference number: 5 (lower is better)
Translates to: PTRETPAAAQASGCL*ETTQAPNPEAGGRP
Trigger: GGGACGACCGCCAGCCTCGGGATTTGGGGCTTGGGTCGTTTCTCACAAGCAACCGGAGGCCTGCGCCGCTGCCGGCGTCTCCCGGGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528136.5
CDS CCA 90 bp AGCCCCGAGGCCCGCAGCAAGGCCTGGACATGCTGCTCCAAGCGCTaGGGCGTGGTGCCAGGGGGCAGTCCTTGGAGCAGCAGGCGTGCA +
Preference number: 5 (lower is better)
Translates to: SPEARSKAWTCCSKR*GVVPGGSPWSSRRA
Trigger: TGCACGCCTGCTGCTCCAAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGCCTCGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525486.5
ENST00000525773.5
ENST00000525879.5
ENST00000526985.1
ENST00000527262.5
ENST00000528136.5
ENST00000528625.5
ENST00000528914.5
ENST00000529842.5
ENST00000531537.5
ENST00000533665.1
CDS-3UTR CAA 90 bp AGCACCTGCTCCACCGGGCGCCGCTCGCATCGCTGCAGCAGGCGCTCCCGGTACCCGCAGAAGCTGCGGTaGAAGCCGTGGGCGCAGATG +
Preference number: 5 (lower is better)
Translates to: STCSTGRRSHRCSRRSRYPQKLR*KPWAQM
Trigger: CATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGG...GTACCGGGAGCGCCTGCTGCAGCGATGCGAGCGGCGCCCGGTGGAGCAGGTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS GCA 90 bp GGCAACACTCACACCATGGCACCGCTCCAGGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCAGGGCCCCACCGTCTCCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GNTHTMAPLQASTQL*RQCAAPGPHRLLLD
Trigger: GTCCAGGAGGAGACGGTGGGGCCCTGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS GCA 90 bp GGCGGGCAGCACGGGCAGGGTGGGCCCCGAAGCCACGGAGGATGGTaGAGTCACCACGCAGGGCAACACTCACACCATGGCACCGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGQHGQGGPRSHGGW*SHHAGQHSHHGTAP
Trigger: TGGAGCGGTGCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS TCA 90 bp TCCTCCTCCTCATGCCCTGGGGTCACCTCCTCCTCTGGCTGCTCCTaGGGCCCTTCCTCCTCCAGCTCCCGAGGCAGCCAGTCCTCCCCG +
Preference number: 5 (lower is better)
Translates to: SSSSCPGVTSSSGCS*GPSSSSSRGSQSSP
Trigger: CGGGGAGGACTGGCTGCCTCGGGAGCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGAGGAGGTGACCCCAGGGCATGAGGAGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
ENST00000527262.5
CDS CCA 90 bp GGCCACAGGCTCCTCCTCCTCATGCCCTGGGGTCACCTCCTCCTCTaGCTGCTCCTGAGGCCCTTCCTCCTCCAGCTCCCGAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GHRLLLLMPWGHLLL*LLLRPFLLQLPRQP
Trigger: TGGCTGCCTCGGGAGCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGAGGAGGTGACCCCAGGGCATGAGGAGGAGGAGCCTGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
ENST00000527262.5
CDS CCA 90 bp AGTGGCGGGCAGCACGGGCAGGGTGGGCCCCGAAGCCACGGAGGATaGTGCAGTCACCACGCAGGGCAACACTCACACCATGGCACCGCT +
Preference number: 5 (lower is better)
Translates to: SGGQHGQGGPRSHGG*CSHHAGQHSHHGTA
Trigger: AGCGGTGCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGCCCGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 90 bp CCCGAGGCAGCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCTGGGGGCAGGGAGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: PEAASPPRLGLGPPG*PAVLGPPLGAGRGH
Trigger: ATGGCCTCTCCCTGCCCCCAGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGCTGCCTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS-3UTR CAA 90 bp GTGCGACACGCGCTCCACACGAACGACGCGGATGCTGCTGCGGGCAGCGTCCAGCCTCTGCCTCCGCCATaGCAACCATTCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: VRHALHTNDADAAAGSVQPLPPP*QPFPVA
Trigger: GGCCACGGGGAATGGTTGCAATGGCGGAGGCAGAGG...CTGGACGCTGCCCGCAGCAGCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CAA 90 bp CTGACCGCCATCCCCCACACCGCCTTCTGGAGCCCGCAGAGGGAGGCAGGGGCGCACTCGTTCTGCCACTaGCCACTGCTGGAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LTAIPHTAFWSPQREAGAHSFCH*PLLEGG
Trigger: GCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGTG...CGCCCCTGCCTCCCTCTGCGGGCTCCAGAAGGCGGTGTGGGGGATGGCGGTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS GCA 90 bp GCAACACTCGTTCTGCCACTTGCCACTGCTGGAAGGAGGCAACAGTaGCCAGGGGCCCGGGTAGGCGTTGCAGGTCCTCCAGGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: ATLVLPLATAGRRQQ*PGARVGVAGPPGAP
Trigger: GGGGGCCCCTGGAGGACCTGCAACGCCTACCCGGGCCCCTGGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGTGTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 90 bp GCACCCTGCAGAGCCGTCACCAACCCTCCGGTCCTCAGGAGAGCATaGTTGGTAGCCCTAGGCCCCTGGGTGGACGGGTGGTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: APCRAVTNPPVLRRA*LVALGPWVDGWSPP
Trigger: TGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACCGGAGGGTTGGTGACGGCTCTGCAGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 90 bp TGCCAAGGGAAAGGCCAAACTCTGATCCCAGGGGCCAGCCAGAAGTaGCACCAAGTGGCGGGCAGCACGGGCAGGGTGGGCCCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: CQGKGQTLIPGASQK*HQVAGSTGRVGPEA
Trigger: GGCTTCGGGGCCCACCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCTGGCTGGCCCCTGGGATCAGAGTTTGGCCTTTCCCTTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 90 bp CCCGAGGCAGCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCCAGGCTCACGTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: PEAASPPRLGLGPPG*PAVLGPPPGSRPPG
Trigger: ACCAGGAGGACGTGAGCCTGGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGCTGCCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313028.12
ENST00000525773.5
ENST00000527262.5
CDS-3UTR CAA 90 bp ACTGCTGCTGCAGCAGCGGGTGCGACACGCGCTCCACACGAACGACGCGGATGCGCCAGACGCTCCAGGTaGTTCCAGGGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TAAAAAGATRAPHERRGCARRSR*FQGPFS
Trigger: GCTGAAGGGGCCCTGGAACAACCTGGAGCGTCTGGC...GCATCCGCGTCGTTCGTGTGGAGCGCGTGTCGCACCCGCTGCTGCAGCAGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS CCA 90 bp CTCAGGAGAGCATGCTTGGTAGCCCTAGGCCCCTGGGTGGACGGGTaGTCCCCTCCACTGGTGTTCTCAGCCAGCTCCTCGGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LRRACLVALGPWVDG*SPPLVFSASSSGSR
Trigger: CCTGGAGCCCGAGGAGCTGGCTGAGAACACCAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS CCA 90 bp GACCTCCTCCAGGCTCACGTCCTCCTGGTCACCACCTGTACTGTCTaGGGTCCACAGGGTGTGGGCGTTGCCAGGGAGCACTGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: DLLQAHVLLVTTCTV*GPQGVGVAREHWEG
Trigger: GCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGGTGGTGACCAGGAGGACGTGAGCCTGGAGGAGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313028.12
ENST00000525773.5
ENST00000527262.5
CDS CCA 90 bp CCACGGAGGATGGTGCAGTCACCACGCAGGGCAACACTCACACCATaGCACCGCTCCAGGCGAGCACGCAGCTCTGCAGGCAGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: PRRMVQSPRRATLTP*HRSRRARSSAGSVR
Trigger: CCGCACACTGCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATCCTCCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 90 bp AGCCCTACCCAGGCTCACGTCCTCCTGGTCACCACCTGTACTGTCTaGGGTCCACAGGGTGTGGGCGTTGCCAGGGAGCACTGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: SPTQAHVLLVTTCTV*GPQGVGVAREHWEG
Trigger: GCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGGTGGTGACCAGGAGGACGTGAGCCTGGGTAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526007.5
ENST00000528963.1
CDS-3UTR CAA 90 bp AAGCAGGAGGCCAGAGGGTGGCCCCTTCGGTTAAGTGTCTGGGGAGCGGCCCGGGCCTCAGAAAGGGGCTaGGGCAACTGGACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: KQEARGWPLRLSVWGAARASERG*GNWTRA
Trigger: GGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGC...CCGGGCCGCTCCCCAGACACTTAACCGAAGGGGCCACCCTCTGGCCTCCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS CCA 90 bp AACCCTCCGGTCCTCAGGAGAGCATGCTTGGTAGCCCTAGGCCCCTaGGTGGACGGGTGGTCCCCTCCACTGGTGTTCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NPPVLRRACLVALGP*VDGWSPPLVFSASS
Trigger: GGAGCTGGCTGAGAACACCAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACCGGAGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS CCA 90 bp TCCTCCAGGACACGGACATCTGCCTCAGAAAGGGGCTTGGGCAACTaGACCAGAGCCCGGTCTGGCCGGGGGCTGGCCAAGGCACAGCAA +
Preference number: 5 (lower is better)
Translates to: SSRTRTSASERGLGN*TRARSGRGLAKAQQ
Trigger: TTGCTGTGCCTTGGCCAGCCCCCGGCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGCAGATGTCCGTGTCCTGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000525879.5
ENST00000527262.5
ENST00000528625.5
ENST00000533665.1
CDS CCA 90 bp ACACTGGAACTGAGCCTCCAGCCCCTGGAGAAGGTGCTGCCCTTCTaGGCCCAGGAGAAACCTGGCGCTGCCCGGGTGCTCCAGGCACAA +
Preference number: 5 (lower is better)
Translates to: TLELSLQPLEKVLPF*AQEKPGAARVLQAQ
Trigger: TTGTGCCTGGAGCACCCGGGCAGCGCCAGGTTTCTCCTGGGCCCAGAAGGGCAGCACCTTCTCCAGGGGCTGGAGGCTCAGTTCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
ENST00000527262.5
ENST00000528963.1
CDS CCA 90 bp AGCAGTTCTCGGACCTCCTCTGTACTGTCTGGGGTCCACAGGGTGTaGGCGTTGCCAGGGAGCACTGGGAGGGCCTCGGTAGGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SSSRTSSVLSGVHRV*ALPGSTGRASVGST
Trigger: GGTGGACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGAGGAGGTCCGAGAACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS CCA 90 bp CCCGAGGCAGCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCTGTACTGTCTGGGGTCCACA +
Preference number: 5 (lower is better)
Translates to: PEAASPPRLGLGPPG*PAVLGPPLYCLGST
Trigger: TGTGGACCCCAGACAGTACAGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGCTGCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS-3UTR CAA 90 bp GCCTGGCGAAATACACGCCCTTCCCGTAGACCGTGGCGTTGCGGCCGCAGAAGCCCTCGCCAGAGCCCATaGTCACAGTCCCTGCACCCT +
Preference number: 5 (lower is better)
Translates to: AWRNTRPSRRPWRCGRRSPRQSP*SQSLHP
Trigger: AGGGTGCAGGGACTGTGACAATGGGCTCTGGCGAGG...GCTTCTGCGGCCGCAACGCCACGGTCTACGGGAAGGGCGTGTATTTCGCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS-3UTR CAA 90 bp CTGGCAGATGCAGTCCACGGCGCTGTCGTAGCGCAGGAGCACGTGGCCAGGACCGGGCATCGAGCTGACTaGCTCTGCCTGTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LADAVHGAVVAQEHVARTGHRAD*LCLSQR
Trigger: TCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCCC...GGTCCTGGCCACGTGCTCCTGCGCTACGACAGCGCCGTGGACTGCATCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS CCA 90 bp CCCAGGAGAAACCTGGCGCTGCCCGGGTGCTCCAGGCACAACACATaGCAGCTAATGCTGCCCAGCAGGCTCCGCAGAAACTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PRRNLALPGCSRHNT*QLMLPSRLRRNSSA
Trigger: GGCTGAGGAGTTTCTGCGGAGCCTGCTGGGCAGCATTAGCTGCCATGTGTTGTGCCTGGAGCACCCGGGCAGCGCCAGGTTTCTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000528963.1
CDS TCA 90 bp CTCCTCGGGCTCCAGGATGTCGTAGTGGGGGACAAGGCTCAGCTCTaGGCCCTGCAACCGGTGCTCCTGCTGCAACACTCGTTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLGLQDVVVGDKAQL*ALQPVLLLQHSFCH
Trigger: GTGGCAGAACGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAGCCTTGTCCCCCACTACGACATCCTGGAGCCCGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 90 bp GAATATCAGGGCACCCAGGCTGTCCCTTCAGCCAGCCCTCTCACCTaGAGGCTCTCTGAAGGTGAGGACGCCCCCACAGCCCAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: EYQGTQAVPSASPLT*RLSEGEDAPTAQSL
Trigger: CAGAGACTGGGCTGTGGGGGCGTCCTCACCTTCAGAGAGCCTGCAGGTGAGAGGGCTGGCTGAAGGGACAGCCTGGGTGCCCTGATATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528580.1
CDS GCA 90 bp CGGTCTTCCCTTGCTTCCCCCTGGGTTCCCAGAAGCAGGTGGAGTTaGGCAGGGCTGGGTCCCGACGCTGTCGTCAAGCCAACTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RSSLASPWVPRSRWS*AGLGPDAVVKPTVP
Trigger: TGGAACAGTTGGCTTGACGACAGCGTCGGGACCCAGCCCTGCGCAACTCCACCTGCTTCTGGGAACCCAGGGGGAAGCAAGGGAAGACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532311.5
CDS CCA 90 bp TTGCTTCCCCCTGGGTTCCCAGAAGCAGGTGGAGTTGCGCAGGGCTaGGTCCCGACGCTGTCGTCAAGCCAACTGTTCCACTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLPPGFPEAGGVAQG*VPTLSSSQLFHCSL
Trigger: CAAGGAACAGTGGAACAGTTGGCTTGACGACAGCGTCGGGACCCAGCCCTGCGCAACTCCACCTGCTTCTGGGAACCCAGGGGGAAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532311.5
CDS-3UTR CAA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGGCCTCAGAAAGGGGCTaGGGCAACTGGACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGASERG*GNWTRA
Trigger: GGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGC...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCTCAGGCGGCCACAGTaGGGGGCGGGGAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTLRRPQ*GAGSIS
Trigger: GCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGAG...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS CCA 90 bp CTGGGCTCCACAGAGCCGAAAGCCAGTCATATCCGGTCCTTCAAGTaGCAAGAGAGCGACGTCTCCCAGGCCCGCAAGAAGGTCCTCATG +
Preference number: 5 (lower is better)
Translates to: LGSTEPKASHIRSFK*QESDVSQARKKVLM
Trigger: CATGAGGACCTTCTTGCGGGCCTGGGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGATATGACTGGCTTTCGGCTCTGTGGAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000528963.1
CDS-3UTR CAA 90 bp CCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCCTCTGCCTCCGCCATaGCAACCATTCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: PFRLGSRSRLFKQQSRLGPLPPP*QPFPVA
Trigger: GGCCACGGGGAATGGTTGCAATGGCGGAGGCAGAGG...CCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp TTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGAGCGGCGGGCACTCGTTCTGCCACTaGCCACTGCTGGAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: FTFIQTTEPTRARSGSGGHSFCH*PLLEGG
Trigger: GCCTCCTTCCAGCAGTGGCAAGTGGCAGAACGAGTG...CCCGCCGCTCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp CCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGCCTCGCCAGAGCCCATaGTCACAGTCCCTGCACCCT +
Preference number: 5 (lower is better)
Translates to: PGSLPPGFTFTFIQTTEPPRQSP*SQSLHP
Trigger: AGGGTGCAGGGACTGTGACAATGGGCTCTGGCGAGG...CGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGCCAGACGCTCCAGGTaGTTCCAGGGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEARRSR*FQGPFS
Trigger: GCTGAAGGGGCCCTGGAACAACCTGGAGCGTCTGGC...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp TCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGCCGCAGAAGCTGCGGTaGAAGCCGTGGGCGCAGATG +
Preference number: 5 (lower is better)
Translates to: SAWVHVHVYSNNRADSGEPQKLR*KPWAQM
Trigger: CATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGG...CTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp AGAGTTCCCGGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACACTCAGGCGGCCACAGTaGGGGGCGGGGAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: RVPGSLPPGFTFTFIQTTLRRPQ*GAGSIS
Trigger: GCTGATGCTCCCCGCCCCCAACTGTGGCCGCCTGAG...TGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCCGGGAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS CCA 90 bp GGGACTCCATCTCTACCTCTTCAAGGCCTGTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAAAGACACACTGGAACTGAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GTPSLPLQGLCPTWL*PGALSQRHTGTEPP
Trigger: TGGAGGCTCAGTTCCAGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAGGTAGAGATGGAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS CCA 90 bp AGGGGTGGGACTCCATCTCTACCTCTTCAAGGCCTGTGTCCAACGTaGCTGTGGCCAGGCGCTCTGTCCCAAAGACACACTGGAACTGAG +
Preference number: 5 (lower is better)
Translates to: RGGTPSLPLQGLCPT*LWPGALSQRHTGTE
Trigger: CTCAGTTCCAGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAGGTAGAGATGGAGTCCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS-3UTR CAA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACCTCTGCCTCCGCCATaGCAACCATTCCCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGPLPPP*QPFPVA
Trigger: GGCCACGGGGAATGGTTGCAATGGCGGAGGCAGAGG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCCTCGCCAGAGCCCATaGTCACAGTCCCTGCACCCT +
Preference number: 5 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGPRQSP*SQSLHP
Trigger: AGGGTGCAGGGACTGTGACAATGGGCTCTGGCGAGG...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGCCAGACGCTCCAGGTaGTTCCAGGGCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTARRSR*FQGPFS
Trigger: GCTGAAGGGGCCCTGGAACAACCTGGAGCGTCTGGC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp GGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTCTGGGACCGCAGAAGCTGCGGTaGAAGCCGTGGGCGCAGATG +
Preference number: 5 (lower is better)
Translates to: GSRSRLFKQQSRLGRGLGPQKLR*KPWAQM
Trigger: CATCTGCGCCCACGGCTTCAACCGCAGCTTCTGCGG...TCCCAGACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp CGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGCGAGGTGGGCATCGAGCTGACTaGCTCTGCCTGTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: RLGSRSRLFKQQSRLGRGGHRAD*LCLSQR
Trigger: TCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCCC...ACCTCGCCCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS-3UTR CAA 90 bp GGGTCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTGCCTCAGAAAGGGGCTaGGGCAACTGGACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: GSLPPGFTFTFIQTTEPTASERG*GNWTRA
Trigger: GGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGC...AGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS GCA 90 bp CGCCTCAGGTCTTGCCTGCCCATTCCTGCAGCTTTCTGTCCTGCCTaGACCTCCCCATCTCACACCATCATTGGCATCGTCACAAGTAAC +
Preference number: 5 (lower is better)
Translates to: RLRSCLPIPAAFCPA*TSPSHTIIGIVTSN
Trigger: GTTACTTGTGACGATGCCAATGATGGTGTGAGATGGGGAGGTGCAGGCAGGACAGAAAGCTGCAGGAATGGGCAGGCAAGACCTGAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529842.5
CDS-3UTR CAA 90 bp TCCCTTCCGCCTGGGTTCACGTTCACGTTTATTCAAACAACAGAGCCGACTCGGGGGCATCGAGCTGACTaGCTCTGCCTGTCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SLPPGFTFTFIQTTEPTRGHRAD*LCLSQR
Trigger: TCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCCC...CCGAGTCGGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313028.12
ENST00000524918.5
CDS TCA 72 bp CCCACACGTCCCCGGCCGAGACCCCAGCCTCCGCGCTaGGCTCCCACCCGGGAGACGCCGGCAGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: PTRPRPRPQPPR*APTRETPAAAQ
Trigger: CTGCGCCGCTGCCGGCGTCTCCCGGGTGGGAGCTCAGCGCGGAGGCTGGGGTCTCGGCCGGGGACGTGTGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525879.5
ENST00000528136.5
CDS GCA 72 bp CTCCTGTGCCTGCCCCTCAGCAAGCCTAACCCGGCCTaGGGCGCCCGGCCACCGGTGAGTCCCCGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: LLCLPLSKPNPA*GARPPVSPRPE
Trigger: CTCGGGCCGGGGACTCACCGGTGGCCGGGCGCCGCAGGCCGGGTTAGGCTTGCTGAGGGGCAGGCACAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528625.5
CDS CCA 72 bp GTGCGGCGCCAGGGCCCCACCGTCTCCTCCTGGACGTaGACCTCCAAGGCAGCCCTGAGCGCCCGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: VRRQGPTVSSWT*TSKAALSARSS
Trigger: GCTGGACCGGGCGCTCAGGGCTGCCTTGGAGGTCCACGTCCAGGAGGAGACGGTGGGGCCCTGGCGCCGCAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
ENST00000527262.5
CDS CCA 72 bp GAGGCACCATCCCCCACCACACGCACCGCTCGGGCCTaGGGAACCCGGGCCAGGGACACCAAGGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: EAPSPTTRTARA*GTRARDTKVPS
Trigger: GGAGGGGACCTTGGTGTCCCTGGCCCGGGTTCCCCAGGCCCGAGCGGTGCGTGTGGTGGGGGATGGTGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000526985.1
ENST00000527262.5
ENST00000533665.1
CDS TCA 72 bp AGCGCCCACCGCCCGACCCCACCCCTCGGCAGACAGTaGGAGGCGGGCCTCTGGCCGGAGCGAAGAGGAACA +
Preference number: 6 (lower is better)
Translates to: SAHRPTPPLGRQ*EAGLWPERRGT
Trigger: TGTTCCTCTTCGCTCCGGCCAGAGGCCCGCCTCTCACTGTCTGCCGAGGGGTGGGGTCGGGCGGTGGGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532660.1
ENST00000534737.1
CDS GCA 72 bp CACACCATGGCACCGCTCCAGGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCAGGGCCCCACCGTCTC +
Preference number: 6 (lower is better)
Translates to: HTMAPLQASTQL*RQCAAPGPHRL
Trigger: GAGACGGTGGGGCCCTGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS GCA 72 bp GGCAGGGGGCAGTCCACGGACCTCCACTGCCACCCCTaGCTCTGCCTCCGCCATTGCAACCCTGGGACGGGG +
Preference number: 6 (lower is better)
Translates to: GRGQSTDLHCHP*LCLRHCNPGTG
Trigger: CCCCGTCCCAGGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGACTGCCCCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525773.5
CDS GCA 72 bp CCAACCATGGCACCGCTCCAGGCGAGCACGCAGCTCTaGAGGCAGTGTGCGGCGCCAGGGCCCCACCGTCTC +
Preference number: 6 (lower is better)
Translates to: PTMAPLQASTQL*RQCAAPGPHRL
Trigger: GAGACGGTGGGGCCCTGGCGCCGCACACTGCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527262.5
CDS GCA 72 bp GTCGGGCACGGCAGGGGGCAGTCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTCCGCCATTGCAACCCT +
Preference number: 6 (lower is better)
Translates to: VGHGRGQSTDLH*HPCLCLRHCNP
Trigger: AGGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGACTGCCCCCTGCCGTGCCCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525773.5
CDS CCA 72 bp GCCCGCAGCAAGGCCTGGACATGCTGCTCCAAGCGCTaGGGCGTGGTGCCAGGGGGCAGTCCTTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: ARSKAWTCCSKR*GVVPGGSPWSS
Trigger: GCTGCTCCAAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525486.5
ENST00000525773.5
ENST00000525879.5
ENST00000526985.1
ENST00000527262.5
ENST00000528136.5
ENST00000528625.5
ENST00000528914.5
ENST00000529842.5
ENST00000531537.5
ENST00000533665.1
CDS CAA 90 bp CTGAGCTCCCACCCGGGAGACGCCGGCAGCGGCGCAGGCCTCCGGTaGCTTGTGAGAAACGACCCAAGCCCCAAATCCCGAGGCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LSSHPGDAGSGAGLR*LVRNDPSPKSRGWR
Trigger: CCGCCAGCCTCGGGATTTGGGGCTTGGGTCGTTTCTCACAAGCAACCGGAGGCCTGCGCCGCTGCCGGCGTCTCCCGGGTGGGAGCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528136.5
CDS GCA 72 bp GTCGGGCACGGCAGGGGGCAGTCCACGGACCTCCACTaGCACCCCTGCCTCTGCCTCCGCCATTGCAACCAT +
Preference number: 6 (lower is better)
Translates to: VGHGRGQSTDLH*HPCLCLRHCNH
Trigger: ATGGTTGCAATGGCGGAGGCAGAGGCAGGGGTGGCAGTGGAGGTCCGTGGACTGCCCCCTGCCGTGCCCGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525486.5
ENST00000525879.5
ENST00000527262.5
ENST00000528136.5
ENST00000528580.1
ENST00000528625.5
ENST00000528914.5
ENST00000529311.5
ENST00000529842.5
ENST00000530478.5
ENST00000531537.5
ENST00000531707.1
ENST00000532311.5
CDS CCA 72 bp GCAAGGCCTGGACATGCTGCTCCAAGCGCTGGGGCGTaGTGCCAGGGGGCAGTCCTTGGAGCAGCAGGCGTG +
Preference number: 6 (lower is better)
Translates to: ARPGHAAPSAGA*CQGAVLGAAGV
Trigger: CACGCCTGCTGCTCCAAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525486.5
ENST00000525773.5
ENST00000525879.5
ENST00000526985.1
ENST00000527262.5
ENST00000528136.5
ENST00000528625.5
ENST00000528914.5
ENST00000529842.5
ENST00000531537.5
ENST00000533665.1
CDS CCA 72 bp GCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCTGGGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: ASPPRLGLGPPG*PAVLGPPLGAG
Trigger: CCCTGCCCCCAGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS CAA 90 bp CCCTGCAGAGCCGTCACCAACCCTCCGGTCCTCAGGAGAGCATGCTaGGTAGCCCTAGGCCCCTGGGTGGACGGGTGGTCCCCTCCACTG +
Preference number: 6 (lower is better)
Translates to: PCRAVTNPPVLRRAC*VALGPWVDGWSPPL
Trigger: CAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACCGGAGGGTTGGTGACGGCTCTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS TCA 72 bp GAGACGCCGGCAGCGGCGCAGGCCTCCGGTTGCTTGTaGGAAACGACCCAAGCCCCAAATCCCGAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: ETPAAAQASGCL*ETTQAPNPEAG
Trigger: GCCAGCCTCGGGATTTGGGGCTTGGGTCGTTTCTCACAAGCAACCGGAGGCCTGCGCCGCTGCCGGCGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528136.5
CDS GCA 72 bp CACGGGCAGGGTGGGCCCCGAAGCCACGGAGGATGGTaGAGTCACCACGCAGGGCAACACTCACACCATGGC +
Preference number: 6 (lower is better)
Translates to: HGQGGPRSHGGW*SHHAGQHSHHG
Trigger: GCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCGGGGCCCACCCTGCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 72 bp CCTCCAGGACACGGACATCTGCCTCAGAAAGGGGCTTaGGCAACTGGACCAGAGCCCGGTCTGGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: PPGHGHLPQKGA*ATGPEPGLAGG
Trigger: GCCCCCGGCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGCAGATGTCCGTGTCCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000525879.5
ENST00000527262.5
ENST00000528625.5
ENST00000533665.1
CDS CCA 72 bp AGAAGTGCCACCAAGTGGCGGGCAGCACGGGCAGGGTaGGCCCCGAAGCCACGGAGGATGGTGCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: RSATKWRAARAG*APKPRRMVQSP
Trigger: TGGTGACTGCACCATCCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CAA 72 bp GCCGTCACCAACCCTCCGGTCCTCAGGAGAGCATGCTaGGTAGCCCTAGGCCCCTGGGTGGACGGGTGGTCC +
Preference number: 6 (lower is better)
Translates to: AVTNPPVLRRAC*VALGPWVDGWS
Trigger: GGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACCGGAGGGTTGGTGACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 72 bp AGAGCCGTCACCAACCCTCCGGTCCTCAGGAGAGCATaGTTGGTAGCCCTAGGCCCCTGGGTGGACGGGTGG +
Preference number: 6 (lower is better)
Translates to: RAVTNPPVLRRA*LVALGPWVDGW
Trigger: CCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGACCGGAGGGTTGGTGACGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 72 bp AAAGGCCAAACTCTGATCCCAGGGGCCAGCCAGAAGTaGCACCAAGTGGCGGGCAGCACGGGCAGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: KGQTLIPGASQK*HQVAGSTGRVG
Trigger: GCCCACCCTGCCCGTGCTGCCCGCCACTTGGTGGCACTTCTGGCTGGCCCCTGGGATCAGAGTTTGGCCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 72 bp GCATGCTTGGTAGCCCTAGGCCCCTGGGTGGACGGGTaGTCCCCTCCACTGGTGTTCTCAGCCAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ACLVALGPWVDG*SPPLVFSASSS
Trigger: CGAGGAGCTGGCTGAGAACACCAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS CCA 72 bp ACACGGACATCTGCCTCAGAAAGGGGCTTGGGCAACTaGACCAGAGCCCGGTCTGGCCGGGGGCTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: TRTSASERGLGN*TRARSGRGLAK
Trigger: CTTGGCCAGCCCCCGGCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGCAGATGTCCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000525879.5
ENST00000527262.5
ENST00000528625.5
ENST00000533665.1
CDS CCA 72 bp GCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCCAGGCTCACGT +
Preference number: 6 (lower is better)
Translates to: ASPPRLGLGPPG*PAVLGPPPGSR
Trigger: ACGTGAGCCTGGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313028.12
ENST00000525773.5
ENST00000527262.5
CDS CCA 72 bp CAGCACGGGCAGGGTGGGCCCCGAAGCCACGGAGGATaGTGCAGTCACCACGCAGGGCAACACTCACACCAT +
Preference number: 6 (lower is better)
Translates to: QHGQGGPRSHGG*CSHHAGQHSHH
Trigger: ATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCATCCTCCGTGGCTTCGGGGCCCACCCTGCCCGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CCA 72 bp GCCTCCGCCATTGCAACCCTGGGACGGGGCATCAGGTaGGTAGGGAAACAGCCCATTCCACCCCTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: ASAIATLGRGIR*VGKQPIPPLLP
Trigger: GGGCAGGAGGGGTGGAATGGGCTGTTTCCCTACCCACCTGATGCCCCGTCCCAGGGTTGCAATGGCGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525773.5
CDS CAA 72 bp TCCTCCAGGACACGGACATCTGCCTCAGAAAGGGGCTaGGGCAACTGGACCAGAGCCCGGTCTGGCCGGGGG +
Preference number: 6 (lower is better)
Translates to: SSRTRTSASERG*GNWTRARSGRG
Trigger: CCCCCGGCCAGACCGGGCTCTGGTCCAGTTGCCCAAGCCCCTTTCTGAGGCAGATGTCCGTGTCCTGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000525879.5
ENST00000527262.5
ENST00000528625.5
ENST00000533665.1
CDS CAA 90 bp TCCTGGTCACCACCTGTACTGTCTGGGGTCCACAGGGTGTGGGCGTaGCCAGGGAGCACTGGGAGGGCCTCGGTAGGGTCCACCTGTAGG +
Preference number: 6 (lower is better)
Translates to: SWSPPVLSGVHRVWA*PGSTGRASVGSTCR
Trigger: CCTACAGGTGGACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGGTGGTGACCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS TCA 72 bp GCTGGCCGCAGGCTCAGCTGGGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACCCTCTCGGCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: AGRRLSWAPCSS*SAWAKTLSASA
Trigger: TGCAGACGCCGAGAGGGTCTTGGCCCAGGCAGATCACGAACTACATGGTGCCCAGCTGAGCCTGCGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525486.5
ENST00000525773.5
ENST00000525879.5
ENST00000526985.1
ENST00000527262.5
ENST00000528136.5
ENST00000528625.5
ENST00000528914.5
ENST00000529311.5
ENST00000529842.5
ENST00000530478.5
ENST00000531537.5
ENST00000532311.5
CDS TCA 72 bp GCTGGCCGCAGGCTCAGCTGGGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACCCTCTCGGCGTCTGTG +
Preference number: 6 (lower is better)
Translates to: AGRRLSWAPCSS*SAWAKTLSASV
Trigger: CACAGACGCCGAGAGGGTCTTGGCCCAGGCAGATCACGAACTACATGGTGCCCAGCTGAGCCTGCGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528580.1
CDS GCA 72 bp GTTCTGCCACTTGCCACTGCTGGAAGGAGGCAACAGTaGCCAGGGGCCCGGGTAGGCGTTGCAGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: VLPLATAGRRQQ*PGARVGVAGPP
Trigger: TGGAGGACCTGCAACGCCTACCCGGGCCCCTGGGCACTGTTGCCTCCTTCCAGCAGTGGCAAGTGGCAGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 72 bp ACCGAACGGCCAGTCAAATTGGCCAGACCAGACTTCTaGCTCCAGGGGTCTTCAGCGCCCACCGCCCGACCC +
Preference number: 6 (lower is better)
Translates to: TERPVKLARPDF*LQGSSAPTARP
Trigger: GGGTCGGGCGGTGGGCGCTGAAGACCCCTGGAGGCAGAAGTCTGGTCTGGCCAATTTGACTGGCCGTTCGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532660.1
ENST00000534737.1
CDS CCA 72 bp ATGGTGCAGTCACCACGCAGGGCAACACTCACACCATaGCACCGCTCCAGGCGAGCACGCAGCTCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: MVQSPRRATLTP*HRSRRARSSAG
Trigger: GCCTGCAGAGCTGCGTGCTCGCCTGGAGCGGTGCCATGGTGTGAGTGTTGCCCTGCGTGGTGACTGCACCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000526007.5
CDS CAA 90 bp TCCTGGTCACCACCTGTACTGTCTGGGGTCCACAGGGTGTGGGCGTaGCCAGGGAGCACTGGGAGGGCCTCGGTAGGGTCCACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: SWSPPVLSGVHRVWA*PGSTGRASVGSTSS
Trigger: TGAAGAGGTGGACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGGTGGTGACCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000525773.5
ENST00000527262.5
ENST00000528963.1
CDS CAA 90 bp TCTCGGACCTCCTCTGTACTGTCTGGGGTCCACAGGGTGTGGGCGTaGCCAGGGAGCACTGGGAGGGCCTCGGTAGGGTCCACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: SRTSSVLSGVHRVWA*PGSTGRASVGSTSS
Trigger: TGAAGAGGTGGACCCTACCGAGGCCCTCCCAGTGCTCCCTGGCAACGCCCACACCCTGTGGACCCCAGACAGTACAGAGGAGGTCCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS TCA 72 bp GCTGGCCGCAGGCTCAGCTGGGCACCATGTAGTTCGTaGTCTGCCTGGGCCAAGACCCTCTCGGCGTATTCC +
Preference number: 6 (lower is better)
Translates to: AGRRLSWAPCSS*SAWAKTLSAYS
Trigger: GGAATACGCCGAGAGGGTCTTGGCCCAGGCAGATCACGAACTACATGGTGCCCAGCTGAGCCTGCGGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533665.1
CDS GCA 72 bp TCCTCGCCAGAGCCCATTGTCACAGTCCCTGCACCCTaGAGAGCCGTCACCAACCCTCCGGTCCTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: SSPEPIVTVPAP*RAVTNPPVLRR
Trigger: TCTCCTGAGGACCGGAGGGTTGGTGACGGCTCTGCAGGGTGCAGGGACTGTGACAATGGGCTCTGGCGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS CCA 72 bp GTCCTCAGGAGAGCATGCTTGGTAGCCCTAGGCCCCTaGGTGGACGGGTGGTCCCCTCCACTGGTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: VLRRACLVALGP*VDGWSPPLVFS
Trigger: TGAGAACACCAGTGGAGGGGACCACCCGTCCACCCAGGGGCCTAGGGCTACCAAGCATGCTCTCCTGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS CCA 72 bp GCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTaGCCAGCAGTTCTCGGACCTCCTCTGTACTGTCTG +
Preference number: 6 (lower is better)
Translates to: ASPPRLGLGPPG*PAVLGPPLYCL
Trigger: CAGACAGTACAGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524918.5
CDS TCA 72 bp CTCCAGGATGTCGTAGTGGGGGACAAGGCTCAGCTCTaGGCCCTGCAACCGGTGCTCCTGCTGCAACACTCG +
Preference number: 6 (lower is better)
Translates to: LQDVVVGDKAQL*ALQPVLLLQHS
Trigger: CGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAGCCTTGTCCCCCACTACGACATCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 72 bp CCCTGCCAGCTTCACACATCCTGGGCTCACAGGCCCTaGCTTCTCCAGAGACCCCATGGTGATCTCCATGGG +
Preference number: 6 (lower is better)
Translates to: PCQLHTSWAHRP*LLQRPHGDLHG
Trigger: CCCATGGAGATCACCATGGGGTCTCTGGAGAAGGCAGGGCCTGTGAGCCCAGGATGTGTGAAGCTGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
CDS GCA 72 bp GCCTTCCTCCCGCCTCAGGTCTTGCCTGCCCATTCCTaGAGCTTTCTGTCCTGCCTGCACCTCCCCATCTCA +
Preference number: 6 (lower is better)
Translates to: AFLPPQVLPAHS*SFLSCLHLPIS
Trigger: TGAGATGGGGAGGTGCAGGCAGGACAGAAAGCTGCAGGAATGGGCAGGCAAGACCTGAGGCGGGAGGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529842.5
CDS CCA 72 bp AGCAGTTCTCGGACCTCCTCCAGGCTCACGTCCTCCTaGTCACCACCTGTACTGTCTGGGGTCCACAGGGTG +
Preference number: 6 (lower is better)
Translates to: SSSRTSSRLTSS*SPPVLSGVHRV
Trigger: CACCCTGTGGACCCCAGACAGTACAGGTGGTGACCAGGAGGACGTGAGCCTGGAGGAGGTCCGAGAACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313028.12
ENST00000525773.5
ENST00000527262.5
CDS GCA 72 bp ACAAGGCTCAGCTCTGAGCCCTGCAACCGGTGCTCCTaGTGCAACACTCGTTCTGCCACTTGCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: TRLSSEPCNRCS*CNTRSATCHCW
Trigger: CCAGCAGTGGCAAGTGGCAGAACGAGTGTTGCAGCAGGAGCACCGGTTGCAGGGCTCAGAGCTGAGCCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000533665.1
CDS GCA 72 bp GGCGGTTCCCCACCCTTGGTCTCCAAGAATGTGCATTaGAGCACAGCCTTCCTCCCGCCTCAGGTCTTGCCT +
Preference number: 6 (lower is better)
Translates to: GGSPPLVSKNVH*STAFLPPQVLP
Trigger: AGGCAAGACCTGAGGCGGGAGGAAGGCTGTGCTGCAATGCACATTCTTGGAGACCAAGGGTGGGGAACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529842.5
CDS GCA 72 bp TCATGTTCCAGAGACCCCATGGGCATCGAGCTGACTTaGTCTGCCTGTCCCAGAGACCCCATGGGACCTGTC +
Preference number: 6 (lower is better)
Translates to: SCSRDPMGIELT*SACPRDPMGPV
Trigger: GACAGGTCCCATGGGGTCTCTGGGACAGGCAGAGCAAGTCAGCTCGATGCCCATGGGGTCTCTGGAACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000313059.9
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
CDS CCA 72 bp GGTCCACCTCTTCAAGGCCTGTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAAAGACACACTGGAACT +
Preference number: 6 (lower is better)
Translates to: GPPLQGLCPTWL*PGALSQRHTGT
Trigger: AGTTCCAGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAGGTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000528963.1
CDS CCA 72 bp GGGCCTTTGTTGGTCACAGATGGCCCGGGGATTTCCTaGGATAGAAATAGCCGCCGGCTCCGGCCCCTTAAA +
Preference number: 6 (lower is better)
Translates to: GPLLVTDGPGIS*DRNSRRLRPLK
Trigger: TTTAAGGGGCCGGAGCCGGCGGCTATTTCTATCCCAGGAAATCCCCGGGCCATCTGTGACCAACAAAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525879.5
ENST00000528136.5
CDS GCA 72 bp AACTCATCACAGGTTATCCATTACGCCGACCCTGGCTaGAGAGGGCCTGCCACAGGCACCACTCACACCACA +
Preference number: 6 (lower is better)
Translates to: NSSQVIHYADPG*RGPATGTTHTT
Trigger: TGTGGTGTGAGTGGTGCCTGTGGCAGGCCCTCTGCAGCCAGGGTCGGCGTAATGGATAACCTGTGATGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529311.5
CDS CCA 72 bp ACAGAGCCGAAAGCCAGTCATATCCGGTCCTTCAAGTaGCAAGAGAGCGACGTCTCCCAGGCCCGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: TEPKASHIRSFK*QESDVSQARKK
Trigger: CTTCTTGCGGGCCTGGGAGACGTCGCTCTCTTGCCACTTGAAGGACCGGATATGACTGGCTTTCGGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313028.12
ENST00000524918.5
ENST00000525773.5
ENST00000527262.5
ENST00000528963.1
CDS CCA 72 bp TCTCTACCTCTTCAAGGCCTGTGTCCAACGTGGCTGTaGCCAGGCGCTCTGTCCCAAAGACACACTGGAACT +
Preference number: 6 (lower is better)
Translates to: SLPLQGLCPTWL*PGALSQRHTGT
Trigger: AGTTCCAGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAGGTAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS CCA 72 bp ACTCCATCTCTACCTCTTCAAGGCCTGTGTCCAACGTaGCTGTGGCCAGGCGCTCTGTCCCAAAGACACACT +
Preference number: 6 (lower is better)
Translates to: TPSLPLQGLCPT*LWPGALSQRHT
Trigger: AGTGTGTCTTTGGGACAGAGCGCCTGGCCACAGCCACGTTGGACACAGGCCTTGAAGAGGTAGAGATGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526007.5
CDS CAA 72 bp GAGAGGCTGGTGCGGGAAAATGAGGAACTGAAGAAGTaGGTGCGGCTCATTCGGGAGAATCACGAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: ERLVRENEELKK*VRLIRENHELK
Trigger: CTTGAGCTCGTGATTCTCCCGAATGAGCCGCACCAACTTCTTCAGTTCCTCATTTTCCCGCACCAGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530478.5
CDS CAA 90 bp CATCAGATAGAGAGGCTGGTGCGGGAAAATGAGGAACTGAAGAAGTaGGTGCGGCTCATTCGGGAGAATCACGAGCTCAAGTCAGCGATC +
Preference number: 6 (lower is better)
Translates to: HQIERLVRENEELKK*VRLIRENHELKSAI
Trigger: GATCGCTGACTTGAGCTCGTGATTCTCCCGAATGAGCCGCACCAACTTCTTCAGTTCCTCATTTTCCCGCACCAGCCTCTCTATCTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530478.5
CDS CAA 90 bp CCGCATTTAGGAATAAATTTCTTAACTACCGAACGGCCAGTCAAATaGGCCAGACCAGACTTCTGCCTCCAGGGGTCTTCAGCGCCCACC +
Preference number: 6 (lower is better)
Translates to: PHLGINFLTTERPVK*ARPDFCLQGSSAPT
Trigger: GGTGGGCGCTGAAGACCCCTGGAGGCAGAAGTCTGGTCTGGCCAATTTGACTGGCCGTTCGGTAGTTAAGAAATTTATTCCTAAATGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532660.1
ENST00000534737.1