RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169116

Ensembl transcript IDs: ENST00000307428.7, ENST00000513238.5

Found 457 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTCCTGCAGTGGGGAAAGAAGCCTTCACCATGGTGGTCTGGCCTaGCTGGTGCAAGGCTGGCCCACTTCAGCTGCAAATCAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: GSCSGERSLHHGGLA*LVQGWPTSAANQPP
Trigger: TGGAGGCTGATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTTTCCCCACTGCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp GCAGTGGGGAAAGAAGCCTTCACCATGGTGGTCTGGCCTGGCTGGTaGAAGGCTGGCCCACTTCAGCTGCAAATCAGCCTCCACTCACCT +
Preference number: 1 (lower is better)
Translates to: AVGKEAFTMVVWPGW*KAGPLQLQISLHSP
Trigger: AGGTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTTTCCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 90 bp CCTGCAGTGGGGAAAGAAGCCTTCACCATGGTGGTCTGGCCTGGCTaGTGCAAGGCTGGCCCACTTCAGCTGCAAATCAGCCTCCACTCA +
Preference number: 1 (lower is better)
Translates to: PAVGKEAFTMVVWPG*CKAGPLQLQISLHS
Trigger: TGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTTTCCCCACTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 90 bp TGCAACTCTGCTGATCACTTGTGGGCTGGGATCCCAGCTGCCTTTTaGACAGAGCAGACATCCTTTACAGAGACAGGTGGCCTGGAGGGG +
Preference number: 1 (lower is better)
Translates to: CNSADHLWAGIPAAF*TEQTSFTETGGLEG
Trigger: CCCCTCCAGGCCACCTGTCTCTGTAAAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCCCACAAGTGATCAGCAGAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp GCCACAGGAAAAGAAAACAAAGTTGAATCCCGCTCTTTCATCATCTaGAGTCGATGGCCGAGAAGAGGCGGCTTGCCTCCCTCCTGCTCT +
Preference number: 1 (lower is better)
Translates to: ATGKENKVESRSFII*SRWPRRGGLPPSCS
Trigger: AGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCGGGATTCAACTTTGTTTTCTTTTCCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 90 bp CTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTaGTCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGT +
Preference number: 1 (lower is better)
Translates to: LEFTVYRRRWFLGRG*SLAPGFTAEAAFRS
Trigger: ACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 90 bp AAAAATGCCTGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTaGGAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAG +
Preference number: 1 (lower is better)
Translates to: KNACLSSRFIEGDGS*EEADPLPQDLRQRQ
Trigger: CTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCAGGCATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 90 bp AAAGAAAACAAAGTTGAATCCCGCTCTTTCATCATCTGCAGTCGATaGCCGAGAAGAGGCGGCTTGCCTCCCTCCTGCTCTGACATTCTC +
Preference number: 1 (lower is better)
Translates to: KENKVESRSFIICSR*PRRGGLPPSCSDIL
Trigger: GAGAATGTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCGGGATTCAACTTTGTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 90 bp GGCGGCTTGCCTCCCTCCTGCTCTGACATTCTCTCTAAAGTGTTATaGCTAGACCTATCCATGGATAGGATGTGGTTGTTTAGACCCACT +
Preference number: 1 (lower is better)
Translates to: GGLPPSCSDILSKVL*LDLSMDRMWLFRPT
Trigger: AGTGGGTCTAAACAACCACATCCTATCCATGGATAGGTCTAGTCATAACACTTTAGAGAGAATGTCAGAGCAGGAGGGAGGCAAGCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 90 bp TGGCCCACTTCAGCTGCAAATCAGCCTCCACTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAAGGGGAAGTTGTAGCAGCCAGAGGA +
Preference number: 1 (lower is better)
Translates to: WPTSAANQPPLTFKE*FFLYQKGEVVAARG
Trigger: TCCTCTGGCTGCTACAACTTCCCCTTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp CATTTTACAGCCATTATCCAACAGACAGTAAAGCAGTGGACCAGTTaGTGTGTGGGTATAAAGCAAACGGTCTCTGGGCTCCTCCAAGCT +
Preference number: 1 (lower is better)
Translates to: HFTAIIQQTVKQWTS*CVGIKQTVSGLLQA
Trigger: AGCTTGGAGGAGCCCAGAGACCGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGATAATGGCTGTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp CTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTaGACCTCTCCAAAGGTGTTTCACAAACATTGTGTCAAAATGTTT +
Preference number: 1 (lower is better)
Translates to: LIPCPRIYGRGSIQK*TSPKVFHKHCVKMF
Trigger: AAACATTTTGACACAATGTTTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 90 bp AGCATCTGGCCCAATTGCAAAATTCATTTCCTGGATGTGAGGGATTaGACCATGCACACTTGCAAGCAAGATGAAGGGCAAACAGATGAC +
Preference number: 1 (lower is better)
Translates to: SIWPNCKIHFLDVRD*TMHTCKQDEGQTDD
Trigger: GTCATCTGTTTGCCCTTCATCTTGCTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGGAAATGAATTTTGCAATTGGGCCAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp GTCACCTTGCTGAATATATCTGCTCTAGGCCCACATCTCTCTCTTTaGCATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATG +
Preference number: 1 (lower is better)
Translates to: VTLLNISALGPHLSL*HAHLEANKSNRPIM
Trigger: CATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGGCCTAGAGCAGATATATTCAGCAAGGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 90 bp GGCACTTCCTATTTTCATCTTTCATTAATTAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCCAAGCAGGCAGCATCCTGTCAGAAA +
Preference number: 1 (lower is better)
Translates to: GTSYFHLSLIRQLRS*FPACRAKQAASCQK
Trigger: TTTCTGACAGGATGCTGCCTGCTTGGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCTAATTAATGAAAGATGAAAATAGGAAGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 90 bp TGCAAATTAGCATCTGGCCCAATTGCAAAATTCATTTCCTGGATGTaGGGGATTGAACCATGCACACTTGCAAGCAAGATGAAGGGCAAA +
Preference number: 1 (lower is better)
Translates to: CKLASGPIAKFISWM*GIEPCTLASKMKGK
Trigger: TTTGCCCTTCATCTTGCTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGGAAATGAATTTTGCAATTGGGCCAGATGCTAATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTTCTGCCCCGTGACCTaGTGGCCCCCTCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVFCPVT*WPPPGH
Trigger: GTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCAGAA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTGCCCCGTGACCTGCTaGCCCCCTCCAGGGCACTTC +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHCPVTC*PPPGHF
Trigger: GAAGTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCA...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGTCTGGCCTGGCTGGTaGAAGGCTGGCCCACTTCAG +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVVWPGW*KAGPLQ
Trigger: CTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGAC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCGTCTGGCCTGGCTGGTaGAAGGCTGGCCCACTTCAG +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVVWPGW*KAGPLQ
Trigger: CTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGAC...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCTTCACCATGGTGGTCTaGCCTGGCTGGTGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICFTMVV*PGWCKA
Trigger: AGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAA...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCAAGCCTTCACCATGGTaGTCTGGCCTGGCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICKPSPW*SGLAGA
Trigger: TGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGCAGAGGGGTTTTCAGTaGTTTGCCGGGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVQRGFQ*FAGPQP
Trigger: TGGCTGTGGCCCGGCAAAGCACTGAAAACCCCTCTG...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCTGGCTGGTGCAAGGCTaGCCCACTTCAGCTGCAAAT +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICWLVQG*PTSAAN
Trigger: ATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCA...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTTCACCATGGTGGTCTaGCCTGGCTGGTGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVFTMVV*PGWCKA
Trigger: AGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCTCTGCTGATCACTTGTaGGCTGGGATCCCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVSADHL*AGIPAA
Trigger: GGCAGCTGGGATCCCAGCCCACAAGTGATCAGCAGA...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGGCTGGGATCCCAGCTaGCTTTTGAACAGAGCAGAC +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVGWDPS*LLNRAD
Trigger: GTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCGAGAAGAGGCGGCTTaGCTCCCTCCTGCTCTGACA +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGREEAA*LPPALT
Trigger: TGTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCAGAGACAGGTGGCCTaGAGGGGAGAACAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGQRQVA*RGEQVG
Trigger: CCCTACCTGTTCTCCCCTCCAGGCCACCTGTCTCTG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 90 bp TCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTC +
Preference number: 2 (lower is better)
Translates to: SRFIEGDGSWEEADP*PQDLRQRQHSEVHL
Trigger: GAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGATCCCACAGCAACCTaGGAGATTCTGCCCCGTGAC +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGDPTAT*EILPRD
Trigger: GTCACGGGGCAGAATCTCTCAGGTTGCTGTGGGATC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATGCCCCGTGACCTGCTaGCCCCCTCCAGGGCACTTC +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQCPVTC*PPPGHF
Trigger: GAAGTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCAGACAGTAAAGCAGTaGACCAGTTGCTGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICQTVKQ*TSCCVG
Trigger: ACCCACACAGCAACTGGTCCACTGCTTTACTGTCTG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGAAATGCAACTCTGCTaGTCACTTGTGGGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHEMQLC*SLVGWD
Trigger: ATCCCAGCCCACAAGTGATCAGCAGAGTTGCATTTC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTCTCAAAGTGGGTCCTaGAGTGGGGAAAGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVSQSGS*SGERSL
Trigger: AAGGCTTCTTTCCCCACTGCAGGACCCACTTTGAGA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCC +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVRQLRS*FPACRA
Trigger: GGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTTCTGCCCCGTGACCTaGTGGCCCCCTCCAGGGCAC +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHFCPVT*WPPPGH
Trigger: GTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCAGAA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCAATACTTCTGGGGCTTaGTCATTCTCCGTCCACACT +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICNTSGA*SFSVHT
Trigger: AGTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAACATGGTGGTCTGGCCTaGCTGGTGCAAGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQHGGLA*LVQGWP
Trigger: GGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATG...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCAAGAAGCCTTCACCATaGTGGTCTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGKKPSP*WSGLAG
Trigger: ACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTT...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCTCTCCCATGCAGGGTaGAATCCTCGTAGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPLSHAG*NPRRAH
Trigger: ATGAGCTCTACGAGGATTTCACCCTGCATGGGAGAG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATATCCCAGCTGCCTTTTaGACAGAGCAGACATCCTTT +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHIPAAF*TEQTSF
Trigger: AAAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGAT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCAATACTTCTGGGGCTTaGTCATTCTCCGTCCACACT +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVNTSGA*SFSVHT
Trigger: AGTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCATGGTGGTCTGGCCTaGCTGGTGCAAGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHHGGLA*LVQGWP
Trigger: GGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCAGAGACAGGTGGCCTaGAGGGGAGAACAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFQRQVA*RGEQVG
Trigger: CCCTACCTGTTCTCCCCTCCAGGCCACCTGTCTCTG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCGTTTGGCAGCATTCCTaGCTTCTAGTAGCACCCCCA +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPVWQHS*LLVAPP
Trigger: TGGGGGTGCTACTAGAAGCCAGGAATGCTGCCAAAC...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGCAGGTTGTAGAAAGTaGCACTGCCCCTACTGTCTC +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGAGCRK*HCPYCL
Trigger: GAGACAGTAGGGGCAGTGCCACTTTCTACAACCTGC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCGAAATGCAACTCTGCTaGTCACTTGTGGGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPEMQLC*SLVGWD
Trigger: ATCCCAGCCCACAAGTGATCAGCAGAGTTGCATTTC...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCAATCTCGGCACTACTaGTATTTTGGGGTGGATGAT +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVQSRHY*YFGVDD
Trigger: ATCATCCACCCCAAAATATCAGTAGTGCCGAGATTG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCGTATCACTAATCTGTaGGTGTCTTGTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICRITNL*VSCSVT
Trigger: TGTGACAGAACAAGACACTCACAGATTAGTGATACG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCAGCCAGAGACAGGATaGGCCGGGGTCAAGTTTCTG +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFQPETG*AGVKFL
Trigger: CAGAAACTTGACCCCGGCTCATCCTGTCTCTGGCTG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACTGGCCCACTTCAGCTaGAAATCAGCCTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQLAHFS*KSASTH
Trigger: GTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCAGAGGGGTTTTCAGTaGTTTGCCGGGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFQRGFQ*FAGPQP
Trigger: TGGCTGTGGCCCGGCAAAGCACTGAAAACCCCTCTG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCCCATTATGTGCCCTTaGACAATAGCAGCCTTTCGG +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGPIMCP*TIAAFR
Trigger: CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCTTGCTGAATATATCTaGTCTAGGCCCACATCTCTC +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVLAEYI*SRPTSL
Trigger: GAGAGATGTGGGCCTAGAGCAGATATATTCAGCAAG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCGGCTCCTCCAAGCTGTaGATATCTCTGGCCATTATC +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPGSSKL*ISLAII
Trigger: GATAATGGCCAGAGATATCCACAGCTTGGAGGAGCC...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCTCCAGTGTGTGGGTTaGCAGGTTGTAGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRLQCVG*QVVESG
Trigger: GCCACTTTCTACAACCTGCCAACCCACACACTGGAG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGCGTATCACTAATCTGTaGGTGTCTTGTTCTGTCACA +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVRITNL*VSCSVT
Trigger: TGTGACAGAACAAGACACTCACAGATTAGTGATACG...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCTGGCCCACTTCAGCTaGAAATCAGCCTCCACTCAC +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFLAHFS*KSASTH
Trigger: GTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTATCTGCTTTTCCTTTaGCAAACTGAAAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVYLLFL*QTESPV
Trigger: CACAGGGCTTTCAGTTTGGCAAAGGAAAAGCAGATA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAGTGGTCTGGCCTGGCTaGTGCAAGGCTGGCCCACTT +
Preference number: 2 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIVVWPG*CKAGPL
Trigger: AAGTGGGCCAGCCTTGCACCAGCCAGGCCAGACCAC...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCGGTCCTTCTCAAAGTaGGTCCTGCAGTGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFRSFSK*VLQWGK
Trigger: CTTTCCCCACTGCAGGACCCACTTTGAGAAGGACCG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCGTGTTAGAATTGTTATaGGAAGCTGTCACCTTGCTG +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVVLELL*EAVTLL
Trigger: CAGCAAGGTGACAGCTTCCCATAACAATTCTAACAC...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGATCCCACAGCAACCTaGGAGATTCTGCCCCGTGAC +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHDPTAT*EILPRD
Trigger: GTCACGGGGCAGAATCTCTCAGGTTGCTGTGGGATC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCAATACAACACATTTTaGAGTCGGACCCAATGTTTG +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHQYNTF*SRTQCL
Trigger: CAAACATTGGGTCCGACTTCAAAATGTGTTGTATTG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATTCCTGGGAAGAGGCTaGTCCCTTGCCCCAGGATTT +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQFLGRG*SLAPGF
Trigger: AAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAAATCTGAGAAAACCCTaGTCTCTCCCATGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQNLRKP*SLPCRV
Trigger: CACCCTGCATGGGAGAGAGCAGGGTTTTCTCAGATT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGGCTGGGATCCCAGCTaGCTTTTGAACAGAGCAGAC +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQGWDPS*LLNRAD
Trigger: GTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCTTTTTCTTTGGAAATaGAACTCTGCTGATCACTTG +
Preference number: 2 (lower is better)
Translates to: RDSYSSQARPEGAPLVICLFLWK*NSADHL
Trigger: CAAGTGATCAGCAGAGTTGCATTTCCAAAGAAAAAG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTAAGAGGCTGATCCCTTaGCCCAGGATTTACGGCAGA +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFKRLIP*PRIYGR
Trigger: TCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTT...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGAAGTGGGTCCTGCAGTaGGGAAAGAAGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTKWVLQ*GKKPSP
Trigger: TGGTGAAGGCTTCTTTCCCCACTGCAGGACCCACTT...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGGCAAAATCACCTCCTaGTTGAGAATGATTGCAATA +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHGKITS*LRMIAI
Trigger: TATTGCAATCATTCTCAACCAGGAGGTGATTTTGCC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 90 bp ACATTTTACAGCCATTATCCAACAGACAGTAAAGCAGTGGACCAGTaGCTGTGTGGGTATAAAGCAAACGGTCTCTGGGCTCCTCCAAGC +
Preference number: 2 (lower is better)
Translates to: TFYSHYPTDSKAVDQ*LCGYKANGLWAPPS
Trigger: GCTTGGAGGAGCCCAGAGACCGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGATAATGGCTGTAAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCATGAAAATGCCTCGTTaGGTAATTGCAGATAGACTA +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVMKMPR*VIADRL
Trigger: TAGTCTATCTGCAATTACTCAACGAGGCATTTTCAT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCAATCTCGGCACTACTaGTATTTTGGGGTGGATGAT +
Preference number: 2 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRQSRHY*YFGVDD
Trigger: ATCATCCACCCCAAAATATCAGTAGTGCCGAGATTG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAATCAGGACATAAGATaGTGCTTGCTAATATCAGCT +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHNQDIR*CLLISA
Trigger: AGCTGATATTAGCAAGCAGCATCTTATGTCCTGATT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTGGCTGGTGCAAGGCTaGCCCACTTCAGCTGCAAAT +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHWLVQG*PTSAAN
Trigger: ATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACAAGAAGCCTTCACCATaGTGGTCTGGCCTGGCTGGT +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHKKPSP*WSGLAG
Trigger: ACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAAAGTGGGTCCTGCAGTaGGGAAAGAAGCCTTCACCA +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQKWVLQ*GKKPSP
Trigger: TGGTGAAGGCTTCTTTCCCCACTGCAGGACCCACTT...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATATCTGCTGATCACTTGTaGGCTGGGATCCCAGCTGCC +
Preference number: 2 (lower is better)
Translates to: CCLLISAVTRRQSCRHEISADHL*AGIPAA
Trigger: GGCAGCTGGGATCCCAGCCCACAAGTGATCAGCAGA...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCAGACAGTAAAGCAGTaGACCAGTTGCTGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFQTVKQ*TSCCVG
Trigger: ACCCACACAGCAACTGGTCCACTGCTTTACTGTCTG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCTCTCCCATGCAGGGTaGAATCCTCGTAGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHLSHAG*NPRRAH
Trigger: ATGAGCTCTACGAGGATTTCACCCTGCATGGGAGAG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGCCATTATCAATAGCTaGTTCTCACTTGTCCTAATG +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGAIINS*FSLVLM
Trigger: CATTAGGACAAGTGAGAATCAGCTATTGATAATGGC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCAATACAACACATTTTaGAGTCGGACCCAATGTTTG +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPQYNTF*SRTQCL
Trigger: CAAACATTGGGTCCGACTTCAAAATGTGTTGTATTG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCAGGACATAAGATGCTaGTTGCTAATATCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPQDIRC*LLISAV
Trigger: AACAGCTGATATTAGCAAGCAGCATCTTATGTCCTG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGGCAGCATTCAGAAGTaGACCTCTCCAAAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFGSIQK*TSPKVF
Trigger: AAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAA +
Preference number: 2 (lower is better)
Translates to: KERQLLKPSTARRGALGHLTFKE*FFLYQK
Trigger: TTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAA +
Preference number: 2 (lower is better)
Translates to: AISFRQTWTGALPEVKDVLTFKE*FFLYQK
Trigger: TTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGGCTCCTCCAAGCTGTaGATATCTCTGGCCATTATC +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQGSSKL*ISLAII
Trigger: GATAATGGCCAGAGATATCCACAGCTTGGAGGAGCC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGGCAAAATCACCTCCTaGTTGAGAATGATTGCAATA +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGGKITS*LRMIAI
Trigger: TATTGCAATCATTCTCAACCAGGAGGTGATTTTGCC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGTTTGGCAGCATTCCTaGCTTCTAGTAGCACCCCCA +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHVWQHS*LLVAPP
Trigger: TGGGGGTGCTACTAGAAGCCAGGAATGCTGCCAAAC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGCAGGTTGTAGAAAGTaGCACTGCCCCTACTGTCTC +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHAGCRK*HCPYCL
Trigger: GAGACAGTAGGGGCAGTGCCACTTTCTACAACCTGC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCTTTGCCATGCACATTTaGAAGCCAATAAGAGCAACA +
Preference number: 2 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGFAMHI*KPIRAT
Trigger: TGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAA...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 90 bp AATATATCTGCTCTAGGCCCACATCTCTCTCTTTGCCATGCACATTaGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACA +
Preference number: 2 (lower is better)
Translates to: NISALGPHLSLCHAH*EANKSNRPIMCPCT
Trigger: TGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGGCCTAGAGCAGATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACAATCTGAGAAAACCCTaGTCTCTCCCATGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHNLRKP*SLPCRV
Trigger: CACCCTGCATGGGAGAGAGCAGGGTTTTCTCAGATT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCGACTATACCCAGGGTTaGTCATTTATTAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPDYTQG*SFIKAK
Trigger: CTTTGCTTTAATAAATGAGCAACCCTGGGTATAGTC...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAAAGCCTTCACCATGGTaGTCTGGCCTGGCTGGTGCA +
Preference number: 2 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGKPSPW*SGLAGA
Trigger: TGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCATAGCCTTTTTCTTTaGAAATGCAACTCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRHSLFL*KCNSAD
Trigger: ATCAGCAGAGTTGCATTTCCAAAGAAAAAGGCTATG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGCCATTATCAATAGCTaGTTCTCACTTGTCCTAATG +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFAIINS*FSLVLM
Trigger: CATTAGGACAAGTGAGAATCAGCTATTGATAATGGC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCC +
Preference number: 2 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIRQLRS*FPACRA
Trigger: GGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCT...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCAGGACATAAGATGCTaGTTGCTAATATCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFQDIRC*LLISAV
Trigger: AACAGCTGATATTAGCAAGCAGCATCTTATGTCCTG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAAATCAGGACATAAGATaGTGCTTGCTAATATCAGCT +
Preference number: 2 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQNQDIR*CLLISA
Trigger: AGCTGATATTAGCAAGCAGCATCTTATGTCCTGATT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATATCTGCTTTTCCTTTaGCAAACTGAAAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQYLLFL*QTESPV
Trigger: CACAGGGCTTTCAGTTTGGCAAAGGAAAAGCAGATA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGTGTCAAAATGTTTTTaGCCGATGGAGAAAGAAACA +
Preference number: 2 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQVSKCF*PMEKET
Trigger: TGTTTCTTTCTCCATCGGCCAAAAACATTTTGACAC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 90 bp AGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAACATaGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAA +
Preference number: 2 (lower is better)
Translates to: RQHSEVHLSKGVSQT*CQNVFGRWRKKHME
Trigger: TTCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTAAGCAGTGGACCAGTTaGTGTGTGGGTATAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIKQWTS*CVGIKQ
Trigger: TTGCTTTATACCCACACAGCAACTGGTCCACTGCTT...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCATAGCCTTTTTCTTTaGAAATGCAACTCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHHSLFL*KCNSAD
Trigger: ATCAGCAGAGTTGCATTTCCAAAGAAAAAGGCTATG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACACTGATATTTTGGGGTaGATGATTCTTTGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHTDILG*MILCCC
Trigger: ACAACAGCAAAGAATCATCCACCCCAAAATATCAGT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAAATGTTTTTGGCCGATaGAGAAAGAAACATATGGAA +
Preference number: 2 (lower is better)
Translates to: MHIWKPIRATDPLCALAQNVFGR*RKKHME
Trigger: TTCCATATGTTTCTTTCTCCATCGGCCAAAAACATT...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAGACTATACCCAGGGTTaGTCATTTATTAAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIDYTQG*SFIKAK
Trigger: CTTTGCTTTAATAAATGAGCAACCCTGGGTATAGTC...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACTGATATTTTGGGGTaGATGATTCTTTGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLITDILG*MILCCC
Trigger: ACAACAGCAAAGAATCATCCACCCCAAAATATCAGT...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAATATTTTGGGGTGGATaGTTCTTTGCTGTTGTAGGT +
Preference number: 2 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGIFWGG*FFAVVG
Trigger: ACCTACAACAGCAAAGAATCATCCACCCCAAAATAT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAATGAAAATGCCTCGTTaGGTAATTGCAGATAGACTA +
Preference number: 2 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGMKMPR*VIADRL
Trigger: TAGTCTATCTGCAATTACTCAACGAGGCATTTTCAT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR GCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACTTTTTCTTTGGAAATaGAACTCTGCTGATCACTTG +
Preference number: 2 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGLFLWK*NSADHL
Trigger: CAAGTGATCAGCAGAGTTGCATTTCCAAAGAAAAAG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp GGAAACCATGGCTGTGGCACCAGGCATGGTCAACCCTaGAGTGATTCAGCTGCACAAAGGGGTAGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: GNHGCGTRHGQP*SDSAAQRGSPE
Trigger: CTCTGGACTACCCCTTTGTGCAGCTGAATCACTGCAGGGTTGACCATGCCTGGTGCCACAGCCATGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 72 bp ACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTaGTCCCTTGCCCCAGGATTTACGGCAGAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: TVYRRRWFLGRG*SLAPGFTAEAA
Trigger: TGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp CAAATCCTCCTCCTCGGTCCTTCTCAAAGTGGGTCCTaGAGTGGGGAAAGAAGCCTTCACCATGGTGGTCTG +
Preference number: 3 (lower is better)
Translates to: QILLLGPSQSGS*SGERSLHHGGL
Trigger: CAGACCACCATGGTGAAGGCTTCTTTCCCCACTGCAGGACCCACTTTGAGAAGGACCGAGGAGGAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 72 bp AAAGTTGAATCCCGCTCTTTCATCATCTGCAGTCGATaGCCGAGAAGAGGCGGCTTGCCTCCCTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: KVESRSFIICSR*PRRGGLPPSCS
Trigger: AGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCGGGATTCAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGGGGTTTTCAGTGCTTaGCCGGGCCACAGCCAGAGA +
Preference number: 3 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRGVFSA*PGHSQR
Trigger: TCTCTGGCTGTGGCCCGGCAAAGCACTGAAAACCCC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATACTCCAGTGTGTGGGTaGGCAGGTTGTAGAAAGTGG +
Preference number: 3 (lower is better)
Translates to: KERQLLKPSTARRGALGHTPVCG*AGCRKW
Trigger: CCACTTTCTACAACCTGCCAACCCACACACTGGAGT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCCAGAAGGGGCGCCCTaGGTCATTTGCTGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGPEGAP*VICCPF
Trigger: AAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTGG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 72 bp GCTGATCACTTGTGGGCTGGGATCCCAGCTGCCTTTTaGACAGAGCAGACATCCTTTACAGAGACAGGTGGC +
Preference number: 3 (lower is better)
Translates to: ADHLWAGIPAAF*TEQTSFTETGG
Trigger: GCCACCTGTCTCTGTAAAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCCCACAAGTGATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCCAGAAGGGGCGCCCTaGGTCATTTGCTGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRPEGAP*VICCPF
Trigger: AAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTGG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAG +
Preference number: 3 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFREEADP*PQDLRQ
Trigger: CTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 72 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTaGGAAGAGGCTGATCCCTTGCCCCAGGATTTACGG +
Preference number: 3 (lower is better)
Translates to: CLSSRFIEGDGS*EEADPLPQDLR
Trigger: CCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGAAAGCAGTGGACCAGTaGCTGTGTGGGTATAAAGCA +
Preference number: 3 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVKAVDQ*LCGYKA
Trigger: TGCTTTATACCCACACAGCAACTGGTCCACTGCTTT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAAACAGGGCTTAAGATaGTCGTTCAATGCGCATCAG +
Preference number: 3 (lower is better)
Translates to: KERQLLKPSTARRGALGHKQGLR*SFNAHQ
Trigger: CTGATGCGCATTGAACGACAATCTTAAGCCCTGTTT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCAAACAGGGCTTAAGATaGTCGTTCAATGCGCATCAG +
Preference number: 3 (lower is better)
Translates to: AISFRQTWTGALPEVKDVKQGLR*SFNAHQ
Trigger: CTGATGCGCATTGAACGACAATCTTAAGCCCTGTTT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCAAATACTTCTGGGGCTaGCTCATTCTCCGTCCACAC +
Preference number: 3 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPKYFWG*LILRPH
Trigger: GTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATTT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp AAAGAAAACAAAGTTGAATCCCGCTCTTTCATCATCTaGAGTCGATGGCCGAGAAGAGGCGGCTTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: KENKVESRSFII*SRWPRRGGLPP
Trigger: GGGAGGCAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCGGGATTCAACTTTGTTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTGCATGGTAGAATGTTaGGCAGCATTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPCMVEC*AAFLAS
Trigger: AGAAGCCAGGAATGCTGCCAAACATTCTACCATGCA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAACTCCAGTGTGTGGGTaGGCAGGTTGTAGAAAGTGG +
Preference number: 3 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQTPVCG*AGCRKW
Trigger: CCACTTTCTACAACCTGCCAACCCACACACTGGAGT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAG +
Preference number: 3 (lower is better)
Translates to: MHIWKPIRATDPLCALAQEEADP*PQDLRQ
Trigger: CTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp GCCATTATCCAACAGACAGTAAAGCAGTGGACCAGTTaGTGTGTGGGTATAAAGCAAACGGTCTCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: AIIQQTVKQWTS*CVGIKQTVSGL
Trigger: GAGCCCAGAGACCGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGATAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp TGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTaGACCTCTCCAAAGGTGTTTCACAAACATTGTGTC +
Preference number: 3 (lower is better)
Translates to: CPRIYGRGSIQK*TSPKVFHKHCV
Trigger: GACACAATGTTTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGAAAGAATGGTTCTTCTaGTACCAGAAAGGGGAAGTT +
Preference number: 3 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVKEWFF*YQKGEV
Trigger: AACTTCCCCTTTCTGGTACAAGAAGAACCATTCTTT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGATCCCAGCTGCCTTTaGAACAGAGCAGACATCCTT +
Preference number: 3 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQDPSCL*NRADIL
Trigger: AAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGATCCCAGCTGCCTTTaGAACAGAGCAGACATCCTT +
Preference number: 3 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFDPSCL*NRADIL
Trigger: AAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGACAATACAACACATTTaGAAGTCGGACCCAATGTTT +
Preference number: 3 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVTIQHI*KSDPMF
Trigger: AAACATTGGGTCCGACTTCAAAATGTGTTGTATTGT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTTGCATGGTAGAATGTTaGGCAGCATTCCTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFCMVEC*AAFLAS
Trigger: AGAAGCCAGGAATGCTGCCAAACATTCTACCATGCA...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGACATAAGATGCTGCTaGCTAATATCAGCTGTTACA +
Preference number: 3 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGDIRCC*LISAVT
Trigger: TGTAACAGCTGATATTAGCAAGCAGCATCTTATGTC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 72 bp GCATCTGGCCCAATTGCAAAATTCATTTCCTGGATGTaGGGGATTGAACCATGCACACTTGCAAGCAAGATG +
Preference number: 3 (lower is better)
Translates to: ASGPIAKFISWM*GIEPCTLASKM
Trigger: CATCTTGCTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGGAAATGAATTTTGCAATTGGGCCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp ATTGTTATGGGAAGCTGTCACCTTGCTGAATATATCTaGTCTAGGCCCACATCTCTCTCTTTGCCATGCACA +
Preference number: 3 (lower is better)
Translates to: IVMGSCHLAEYI*SRPTSLSLPCT
Trigger: TGTGCATGGCAAAGAGAGAGATGTGGGCCTAGAGCAGATATATTCAGCAAGGTGACAGCTTCCCATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR TCA 72 bp CCCAATTGCAAAATTCATTTCCTGGATGTGAGGGATTaGACCATGCACACTTGCAAGCAAGATGAAGGGCAA +
Preference number: 3 (lower is better)
Translates to: PNCKIHFLDVRD*TMHTCKQDEGQ
Trigger: TTGCCCTTCATCTTGCTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGGAAATGAATTTTGCAATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp CTGAATATATCTGCTCTAGGCCCACATCTCTCTCTTTaGCATGCACATTTGGAAGCCAATAAGAGCAACAGA +
Preference number: 3 (lower is better)
Translates to: LNISALGPHLSL*HAHLEANKSNR
Trigger: TCTGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGGCCTAGAGCAGATATATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CCA 72 bp TCAGCTGCAAATCAGCCTCCACTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAAGGGGAAGTTGTAGCA +
Preference number: 3 (lower is better)
Translates to: SAANQPPLTFKE*FFLYQKGEVVA
Trigger: TGCTACAACTTCCCCTTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAGTGGAGGCTGATTTGCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGACATAAGATGCTGCTaGCTAATATCAGCTGTTACA +
Preference number: 3 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFDIRCC*LISAVT
Trigger: TGTAACAGCTGATATTAGCAAGCAGCATCTTATGTC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR GCA 72 bp TATTTTCATCTTTCATTAATTAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCCAAGCAGGCAGCATCC +
Preference number: 3 (lower is better)
Translates to: YFHLSLIRQLRS*FPACRAKQAAS
Trigger: GGATGCTGCCTGCTTGGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCTAATTAATGAAAGATGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR-3UTR CAA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACACAATACAACACATTTaGAAGTCGGACCCAATGTTT +
Preference number: 3 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHTIQHI*KSDPMF
Trigger: AAACATTGGGTCCGACTTCAAAATGTGTTGTATTGT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGCTCCGTCAGCTGCGTaGCCTCCGGTGCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICAPSAA*PPVLRA
Trigger: AGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCGCAGCTCCGTCAGCTaGGTGCCCTCCGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICRSSVS*VPSGAP
Trigger: CGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCGCTCCGTCAGCTGCGTaGCCTCCGGTGCTCCGCGCT +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVAPSAA*PPVLRA
Trigger: AGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGC...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTGCCCCGTGACCTGCTaGCCCCCTCCAGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVCPVTC*PPPGHF
Trigger: GAAGTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGCGCGAACAGCTCCAGTaGAGGGCGCGAGGCAAACGA +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVREQLQ*RARGKR
Trigger: TCGTTTGCCTCGCGCCCTCCACTGGAGCTGTTCGCG...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTGCCCCGTGACCTGCTaGCCCCCTCCAGGGCACTTC +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPCPVTC*PPPGHF
Trigger: GAAGTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCGAGAACCCAGAAGGTaGGGGGTCTGTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICREPRR*GVCVCA
Trigger: GGCACAAACACAGACCCCTCACCTTCTGGGTTCTCG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTGTAGCTGCCACGCCTaGTTCAGGAGTGCCCGAGCT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHCSCHA*FRSARA
Trigger: AGCTCGGGCACTCCTGAAGCAGGCGTGGCAGCTACA...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCTGCTCCGCGCTCTTCTaGTCCATCCCAGCCGCCCGA +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGCSALF*SIPAAR
Trigger: TCGGGCGGCTGGGATGGAGCAGAAGAGCGCGGAGCA...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCTGCGTGCCCTCCGGTaGTCCGCGCTCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRLRALR*SALFCS
Trigger: GGAGCAGAAGAGCGCGGAGCACCGGAGGGCACGCAG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGACTGACAGAGCGCACTaGGCGCTGGTAGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVTDRAH*ALVATP
Trigger: AGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGGAGCTCCAGTGGGTTaGGTGCTGGTCACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVGAPVG*VLVTVE
Trigger: CTCCACTGTGACCAGCACCCAACCCACTGGAGCTCC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCATGGTGGTCTGGCCTaGCTGGTGCAAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGHGGLA*LVQGWP
Trigger: GGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCAGAGACAGGTGGCCTaGAGGGGAGAACAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHQRQVA*RGEQVG
Trigger: CCCTACCTGTTCTCCCCTCCAGGCCACCTGTCTCTG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAGCACCGAGTTGTTGTaGGTGCCGTTGGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHSTELL*VPLDGE
Trigger: CTCCCCATCCAACGGCACTCACAACAACTCGGTGCT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR TCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCTTCCTGGGAAGAGGCTaGTCCCTTGCCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICFLGRG*SLAPGF
Trigger: AAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAA...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGGCTCAGCAGCGGACTaGGACAGTGTAGCTGCCACG +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGGSAAD*DSVAAT
Trigger: CGTGGCAGCTACACTGTCGCAGTCCGCTGCTGAGCC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGTCTGGCCTGGCTGGTaGAAGGCTGGCCCACTTCAG +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGVWPGW*KAGPLQ
Trigger: CTGAAGTGGGCCAGCCTTGCACCAGCCAGGCCAGAC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCAGAGGGGTTTTCAGTaGTTTGCCGGGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVQRGFQ*FAGPQP
Trigger: TGGCTGTGGCCCGGCAAAGCACTGAAAACCCCTCTG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCAGTTGGAGCTCCAGTaGGTTGGGTGCTGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVQLELQ*VGCWSQ
Trigger: CTGTGACCAGCACCCAACCCACTGGAGCTCCAACTG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGTGTGTGGTCAGAGCTaGACTCCTCTGTCGGGGACT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHVCGQS*TPLSGT
Trigger: AGTCCCCGACAGAGGAGTCCAGCTCTGACCACACAC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCGGTCCTTCTCAAAGTaGGTCCTGCAGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICRSFSK*VLQWGK
Trigger: CTTTCCCCACTGCAGGACCCACTTTGAGAAGGACCG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGAAGGCGATGGTTCCTaGGAAGAGGCTGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICEGDGS*EEADPL
Trigger: CAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTCCTGGGAAGAGGCTaGTCCCTTGCCCCAGGATTT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHFLGRG*SLAPGF
Trigger: AAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAA...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCTGGTCAACCCTGCAGTaGTTCAGCTGCACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVWSTLQ*FSCTKG
Trigger: CCCCTTTGTGCAGCTGAATCACTGCAGGGTTGACCA...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCTCCAGTGGGTTGGGTaGTGGTCACAGTGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHLQWVG*WSQWSY
Trigger: ATAGCTCCACTGTGACCAGCACCCAACCCACTGGAG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTTTCTGCCCCGTGACCTaGTGGCCCCCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFFCPVT*WPPPGH
Trigger: GTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCAGAA...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCGAGAAGAGGCGGCTTaGCTCCCTCCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPREEAA*LPPALT
Trigger: TGTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTGTTGTGAGTGCCGTTaGATGGGGAGGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHCCECR*MGRQCL
Trigger: CAGACACTGCCTCCCCATCCAACGGCACTCACAACA...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAAGAAGCCTTCACCATaGTGGTCTGGCCTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHKKPSP*WSGLAG
Trigger: ACCAGCCAGGCCAGACCACCATGGTGAAGGCTTCTT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCTCTCCCATGCAGGGTaGAATCCTCGTAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVLSHAG*NPRRAH
Trigger: ATGAGCTCTACGAGGATTTCACCCTGCATGGGAGAG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAAACTGAAAGCCCTGTaGTGGGGGTGGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHKLKAL*WGWGKR
Trigger: TCTCTTTCCCCACCCCCATCACAGGGCTTTCAGTTT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCTGGATGTGAGGGATTaGACCATGCACACTTGCAAG +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICLDVRD*TMHTCK
Trigger: CTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCTGCGACAGTGTAGCTaGCACGCCTGCTTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGLRQCS*HACFRS
Trigger: ACTCCTGAAGCAGGCGTGGCAGCTACACTGTCGCAG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICRQLRS*FPACRA
Trigger: GGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCATGAAGACACAGACGTaGAGGGAGGGCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVMKTQT*REGRRF
Trigger: AAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCAT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGTTTGGCAGCATTCCTaGCTTCTAGTAGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHVWQHS*LLVAPP
Trigger: TGGGGGTGCTACTAGAAGCCAGGAATGCTGCCAAAC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGCAGGTTGTAGAAAGTaGCACTGCCCCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVAGCRK*HCPYCL
Trigger: GAGACAGTAGGGGCAGTGCCACTTTCTACAACCTGC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCTCCAGTGTGTGGGTTaGCAGGTTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHLQCVG*QVVESG
Trigger: GCCACTTTCTACAACCTGCCAACCCACACACTGGAG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGGCAGGAGGTTTCACTaGGGCCACAGGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICGRRFH*GHRKRK
Trigger: TTTTCTTTTCCTGTGGCCCCAGTGAAACCTCCTGCC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 72 bp ATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: IEGDGSWEEADP*PQDLRQRQHSE
Trigger: TTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAAAGGAGTTTGCGGACTaGCAGAGCGCACTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQKEFAD*QSALGA
Trigger: AGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCAGAGATGTTGGGGCTaGTGCTGTAACTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPQRCWG*CCNWEH
Trigger: GTGCTCCCAGTTACAGCATCAGCCCCAACATCTCTG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR TCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGACAGGTGCTCTCCCTaGGGTCAAAGACGTCAATTT +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHDRCSP*GQRRQF
Trigger: AAATTGACGTCTTTGACCTCAGGGAGAGCACCTGTC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGGGCGGCAAGGAGTTTaGGGACTGACAGAGCGCACT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQGRQGV*GLTERT
Trigger: AGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACGCCTGCTTCAGGAGTaGCCGAGCTGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQRLLQE*PSCVPP
Trigger: TGGAGGAACACAGCTCGGGCACTCCTGAAGCAGGCG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCTCTCAAAGTGGGTCCTaGAGTGGGGAAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVSQSGS*SGERSL
Trigger: AAGGCTTCTTTCCCCACTGCAGGACCCACTTTGAGA...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAATCTGAGAAAACCCTaGTCTCTCCCATGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHNLRKP*SLPCRV
Trigger: CACCCTGCATGGGAGAGAGCAGGGTTTTCTCAGATT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCCCATTATGTGCCCTTaGACAATAGCAGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVPIMCP*TIAAFR
Trigger: CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCCACATCTCTCTCTTTaGCATGCACATTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICPHLSL*HAHLEA
Trigger: GGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGCCAGATGGTGGTCGGTaGTACAATGTTTGTCGGAAG +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVPDGGR*YNVCRK
Trigger: CTTCCGACAAACATTGTACCACCGACCACCATCTGG...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGAAGCCTTCACCATGGTaGTCTGGCCTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRKPSPW*SGLAGA
Trigger: TGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTT...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCATCATCTGCAGTCGATaGCCGAGAAGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPIICSR*PRRGGL
Trigger: CAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGAT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGGCAGGAGGTTTCACTaGGGCCACAGGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVGRRFH*GHRKRK
Trigger: TTTTCTTTTCCTGTGGCCCCAGTGAAACCTCCTGCC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCTCTCCCATGCAGGGTaGAATCCTCGTAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGLSHAG*NPRRAH
Trigger: ATGAGCTCTACGAGGATTTCACCCTGCATGGGAGAG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACAGCCAGAGACAGGATaGGCCGGGGTCAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQQPETG*AGVKFL
Trigger: CAGAAACTTGACCCCGGCTCATCCTGTCTCTGGCTG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCGCAGCTCCGTCAGCTaGGTGCCCTCCGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIRSSVS*VPSGAP
Trigger: CGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGGCAGCATTCAGAAGTaGACCTCTCCAAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVGSIQK*TSPKVF
Trigger: AAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCAAGAGGCTGATCCCTTaGCCCAGGATTTACGGCAGA +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPKRLIP*PRIYGR
Trigger: TCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCATGAAGACACAGACGTaGAGGGAGGGCAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPMKTQT*REGRRF
Trigger: AAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCAT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGAACGTGGTTGTTAAGTaGACTCCACCGCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVNVVVK*TPPLVD
Trigger: GTCAACAAGCGGTGGAGTCCACTTAACAACCACGTT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCTGTGAAGTGGGTGTGTaGTCAGAGCTGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGCEVGV*SELDSS
Trigger: AGAGGAGTCCAGCTCTGACCACACACCCACTTCACA...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCAAGTGGGTCCTGCAGTaGGGAAAGAAGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGKWVLQ*GKKPSP
Trigger: TGGTGAAGGCTTCTTTCCCCACTGCAGGACCCACTT...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGTTTGGCAGCATTCCTaGCTTCTAGTAGCACCCCCA +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGVWQHS*LLVAPP
Trigger: TGGGGGTGCTACTAGAAGCCAGGAATGCTGCCAAAC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCTCCATGGATAGGATGTaGTTGTTTAGACCCACTGGA +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICSMDRM*LFRPTG
Trigger: TCCAGTGGGTCTAAACAACCACATCCTATCCATGGA...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGGATCCCACAGCAACCTaGGAGATTCTGCCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTDPTAT*EILPRD
Trigger: GTCACGGGGCAGAATCTCTCAGGTTGCTGTGGGATC...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTTTCTGCCCCGTGACCTaGTGGCCCCCTCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIFCPVT*WPPPGH
Trigger: GTGCCCTGGAGGGGGCCAGCAGGTCACGGGGCAGAA...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGAAGCAGTGGACCAGTTaGTGTGTGGGTATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVKQWTS*CVGIKQ
Trigger: TTGCTTTATACCCACACAGCAACTGGTCCACTGCTT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCAAGCAGTGGACCAGTTaGTGTGTGGGTATAAAGCAA +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVKQWTS*CVGIKQ
Trigger: TTGCTTTATACCCACACAGCAACTGGTCCACTGCTT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCTTGCTGAATATATCTaGTCTAGGCCCACATCTCTC +
Preference number: 4 (lower is better)
Translates to: KERQLLKPSTARRGALGHLAEYI*SRPTSL
Trigger: GAGAGATGTGGGCCTAGAGCAGATATATTCAGCAAG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTTCCCAATTCGAACCTaGGCTGGTGATCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPFPIRT*AGDLLF
Trigger: GAAGAGGAGATCACCAGCCCAGGTTCGAATTGGGAA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGGGACTCTGGTGCAGTTaGAGCTCCAGTGGGTTGGGT +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTGLWCS*SSSGLG
Trigger: ACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCC...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACTGTGGCATGTGAAGTaGGTGTGTGGTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQLWHVK*VCGQSW
Trigger: CCAGCTCTGACCACACACCCACTTCACATGCCACAG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGTCACCCTGGGAAAGGTaGTGGTGGTCTCCATGTCTA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRSPWER*WWSPCL
Trigger: TAGACATGGAGACCACCACCACCTTTCCCAGGGTGA...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGTTCACCATGGTGGTCTaGCCTGGCTGGTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTFTMVV*PGWCKA
Trigger: AGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAA...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGAAGCCTTCACCATGGTaGTCTGGCCTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTKPSPW*SGLAGA
Trigger: TGCACCAGCCAGGCCAGACCACCATGGTGAAGGCTT...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCAGACAGTAAAGCAGTaGACCAGTTGCTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPQTVKQ*TSCCVG
Trigger: ACCCACACAGCAACTGGTCCACTGCTTTACTGTCTG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGCAGGTTGTAGAAAGTaGCACTGCCCCTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRAGCRK*HCPYCL
Trigger: GAGACAGTAGGGGCAGTGCCACTTTCTACAACCTGC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGAAATGCAACTCTGCTaGTCACTTGTGGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFREMQLC*SLVGWD
Trigger: ATCCCAGCCCACAAGTGATCAGCAGAGTTGCATTTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTTGGTCAACCCTGCAGTaGTTCAGCTGCACAAAGGGG +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFWSTLQ*FSCTKG
Trigger: CCCCTTTGTGCAGCTGAATCACTGCAGGGTTGACCA...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCTGGCCCACTTCAGCTaGAAATCAGCCTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTLAHFS*KSASTH
Trigger: GTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGTCTCAAAGTGGGTCCTaGAGTGGGGAAAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRSQSGS*SGERSL
Trigger: AAGGCTTCTTTCCCCACTGCAGGACCCACTTTGAGA...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGGCTGGGATCCCAGCTaGCTTTTGAACAGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFGWDPS*LLNRAD
Trigger: GTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACACTGACAGAGCGCACTaGGCGCTGGTAGCGACTCCT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHTDRAH*ALVATP
Trigger: AGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACAGAAGGGGCGCCCTTaGTCATTTGCTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQQKGRP*SFAALF
Trigger: AAAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTATCATCTGCAGTCGATaGCCGAGAAGAGGCGGCTTG +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFIICSR*PRRGGL
Trigger: CAAGCCGCCTCTTCTCGGCCATCGACTGCAGATGAT...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATCGAACCTGGGCTGGTaGTCTCCTCTTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQSNLGW*SPLLWT
Trigger: AGTCCAGAGAAGAGGAGATCACCAGCCCAGGTTCGA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR TCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCCATAGGAGGAATGCCTaGTTTTTAGGTAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPHRRNA*FLGRLQ
Trigger: TTGCAGCCTACCTAAAAATCAGGCATTCCTCCTATG...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCATGAAAATGCCTCGTTaGGTAATTGCAGATAGACTA +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICMKMPR*VIADRL
Trigger: TAGTCTATCTGCAATTACTCAACGAGGCATTTTCAT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCAATACAACACATTTTaGAGTCGGACCCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVQYNTF*SRTQCL
Trigger: CAAACATTGGGTCCGACTTCAAAATGTGTTGTATTG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGACAGGTGCTCTCCCTaGGGTCAAAGACGTCAATTT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQDRCSP*GQRRQF
Trigger: AAATTGACGTCTTTGACCTCAGGGAGAGCACCTGTC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATATGTCGGGGACTCTGGTaGAGTTGGAGCTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEICRGLW*SWSSSG
Trigger: CCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACA...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGCTCACACATCACTTTaGCTGACACAGTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQAHTSL*LTQLLG
Trigger: CCCCAACAACTGTGTCAGGCAAAGTGATGTGTGAGC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCCACATCTCTCTCTTTaGCATGCACATTTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRPHLSL*HAHLEA
Trigger: GGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCTCTGTCGGGGACTCTaGTGCAGTTGGAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHLCRGL*CSWSSS
Trigger: ACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGTACTGGCTCAGCTGTaGCATGTGAAGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFVLAQL*HVKWVC
Trigger: ACACACCCACTTCACATGCCACAGCTGAGCCAGTAC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTGTGGTCTGGCCTGGCTaGTGCAAGGCTGGCCCACTT +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIVVWPG*CKAGPL
Trigger: AAGTGGGCCAGCCTTGCACCAGCCAGGCCAGACCAC...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTTCACCATGGTGGTCTaGCCTGGCTGGTGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHFTMVV*PGWCKA
Trigger: AGCCTTGCACCAGCCAGGCCAGACCACCATGGTGAA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACAGAGACAGGTGGCCTaGAGGGGAGAACAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIQRQVA*RGEQVG
Trigger: CCCTACCTGTTCTCCCCTCCAGGCCACCTGTCTCTG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTCTGCTGATCACTTGTaGGCTGGGATCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHSADHL*AGIPAA
Trigger: GGCAGCTGGGATCCCAGCCCACAAGTGATCAGCAGA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATGGAAACCATGGCTGTaGCACCAGGCATGGTCAACC +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQWKPWL*HQAWST
Trigger: GGTTGACCATGCCTGGTGCCACAGCCATGGTTTCCA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 72 bp AGCCATTATCCAACAGACAGTAAAGCAGTGGACCAGTaGCTGTGTGGGTATAAAGCAAACGGTCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHYPTDSKAVDQ*LCGYKANGLWA
Trigger: AGCCCAGAGACCGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGATAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 72 bp GCTCTAGGCCCACATCTCTCTCTTTGCCATGCACATTaGGAAGCCAATAAGAGCAACAGACCCATTATGTGC +
Preference number: 4 (lower is better)
Translates to: ALGPHLSLCHAH*EANKSNRPIMC
Trigger: GCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGGCCTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAAAACTGAAAGCCCTGTaGTGGGGGTGGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQKLKAL*WGWGKR
Trigger: TCTCTTTCCCCACCCCCATCACAGGGCTTTCAGTTT...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTAGGCAGCTAAGAAGCTaGTTTCCAGCTTGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFRQLRS*FPACRA
Trigger: GGCTCTACAAGCTGGAAAGCAGCTTCTTAGCTGCCT...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGGCTGGGATCCCAGCTaGCTTTTGAACAGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHGWDPS*LLNRAD
Trigger: GTCTGCTCTGTTCAAAAGGCAGCTGGGATCCCAGCC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGACTATACCCAGGGTTaGTCATTTATTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVDYTQG*SFIKAK
Trigger: CTTTGCTTTAATAAATGAGCAACCCTGGGTATAGTC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAGGGTTTTCAGTGCTTTaGCGGGCCACAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIGFSVL*RATARD
Trigger: GTCTCTGGCTGTGGCCCGGCAAAGCACTGAAAACCC...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACAGAGGGGTTTTCAGTaGTTTGCCGGGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIQRGFQ*FAGPQP
Trigger: TGGCTGTGGCCCGGCAAAGCACTGAAAACCCCTCTG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTATCTGCTTTTCCTTTaGCAAACTGAAAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPYLLFL*QTESPV
Trigger: CACAGGGCTTTCAGTTTGGCAAAGGAAAAGCAGATA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCGCTCTTTCATCATCTaGAGTCGATGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFRSFII*SRWPRR
Trigger: TCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTAGGCATGGTCAACCCTaGAGTGATTCAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFRHGQP*SDSAAQ
Trigger: TTGTGCAGCTGAATCACTGCAGGGTTGACCATGCCT...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGAAGGTGAATCAACGTaGAAATTAGCATCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFREGEST*KLASGP
Trigger: TGGGCCAGATGCTAATTTGCACGTTGATTCACCTTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGGTCACAGTGGAGCTATaGTTGGTAGTAACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTVTVEL*LVVTEA
Trigger: TGCCTCCGTTACTACCAACCATAGCTCCACTGTGAC...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCCTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RDSYSSQARPEGAPLVICLTFKE*FFLYQK
Trigger: TTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAG...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACATGGTGGTCTGGCCTaGCTGGTGCAAGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGHGGLA*LVQGWP
Trigger: GGGCCAGCCTTGCACCAGCCAGGCCAGACCACCATG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCATAGCCTTTTTCTTTaGAAATGCAACTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVHSLFL*KCNSAD
Trigger: ATCAGCAGAGTTGCATTTCCAAAGAAAAAGGCTATG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGGCTCCTCCAAGCTGTaGATATCTCTGGCCATTATC +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFGSSKL*ISLAII
Trigger: GATAATGGCCAGAGATATCCACAGCTTGGAGGAGCC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCGTGTTAGAATTGTTATaGGAAGCTGTCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGVLELL*EAVTLL
Trigger: CAGCAAGGTGACAGCTTCCCATAACAATTCTAACAC...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGTGCAAATTAGCATCTaGCCCAATTGCAAAATTCAT +
Preference number: 4 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVVQISI*PNCKIH
Trigger: ATGAATTTTGCAATTGGGCCAGATGCTAATTTGCAC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGAACAGACAAAGGAGCTaGTGTAGGCAGACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTNRQRS*CRQTLY
Trigger: GTACAGAGTCTGCCTACATCAGCTCCTTTGTCTGTT...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGATCCCAGCTGCCTTTTaGACAGAGCAGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTIPAAF*TEQTSF
Trigger: AAAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGAT...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCATATTTTGGGGTGGATaGTTCTTTGCTGTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGIFWGG*FFAVVG
Trigger: ACCTACAACAGCAAAGAATCATCCACCCCAAAATAT...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGTATCTGCTTTTCCTTTaGCAAACTGAAAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRYLLFL*QTESPV
Trigger: CACAGGGCTTTCAGTTTGGCAAAGGAAAAGCAGATA...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCGTTGCTAAAATCTTCTaGCCAATTCAAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AISFRQTWTGALPEVKDVVAKIF*PIQKQK
Trigger: TTTCTGCTTTTGAATTGGGCAGAAGATTTTAGCAAC...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGGCTTGCCTCCCTCCTaGTCTGACATTCTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQGLPPS*SDILSK
Trigger: TTTAGAGAGAATGTCAGAGCAGGAGGGAGGCAAGCC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAATGCCTGCAGTTAAGATaGAAAGAGCGAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQCLQLR*KERRES
Trigger: AGACTCTCTTCGCTCTTTGCATCTTAACTGCAGGCA...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS-3UTR CCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACGCGAACAGCTCCAGTaGAGGGCGCGAGGCAAACGA +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGREQLQ*RARGKR
Trigger: TCGTTTGCCTCGCGCCCTCCACTGGAGCTGTTCGCG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTGGGGGTGTTTTCTCCTaGGGTACTGGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIGGVFS*GTGSAV
Trigger: CACAGCTGAGCCAGTACCCCAGGAGAAAACACCCCC...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTTCTGCTGATCACTTGTaGGCTGGGATCCCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLISADHL*AGIPAA
Trigger: GGCAGCTGGGATCCCAGCCCACAAGTGATCAGCAGA...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTTTGCCATGCACATTTaGAAGCCAATAAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPFAMHI*KPIRAT
Trigger: TGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCATCTGTGAGGTAGTATaGGGTGAGGTCAATATGAAA +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGICEVV*GEVNMK
Trigger: TTTCATATTGACCTCACCCCATACTACCTCACAGAT...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATATGGAAACCATGGCTGTaGCACCAGGCATGGTCAACC +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIWKPWL*HQAWST
Trigger: GGTTGACCATGCCTGGTGCCACAGCCATGGTTTCCA...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAAAGGAGTTTGCGGACTaGCAGAGCGCACTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGKEFAD*QSALGA
Trigger: AGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAGTTCTACTTCCTGCATaGTCACCCTGGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIVLLPA*SPWERW
Trigger: CCACCTTTCCCAGGGTGATCATGCAGGAAGTAGAAC...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR TCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCATAGGAGGAATGCCTaGTTTTTAGGTAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFHRRNA*FLGRLQ
Trigger: TTGCAGCCTACCTAAAAATCAGGCATTCCTCCTATG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAATCCTGCAGTTAAGATaGAAAGAGCGAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQILQLR*KERRES
Trigger: AGACTCTCTTCGCTCTTTGCATCTTAACTGCAGGAT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACAGGGGTCTGTGTTTGTaGCTTCCCAATTCGAACCTG +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHRGLCL*LPNSNL
Trigger: CAGGTTCGAATTGGGAAGGCACAAACACAGACCCCT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCCTTTTTCTTTGGAAATaGAACTCTGCTGATCACTTG +
Preference number: 4 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGLFLWK*NSADHL
Trigger: CAAGTGATCAGCAGAGTTGCATTTCCAAAGAAAAAG...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCAATCAGGACATAAGATaGTGCTTGCTAATATCAGCT +
Preference number: 4 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPNQDIR*CLLISA
Trigger: AGCTGATATTAGCAAGCAGCATCTTATGTCCTGATT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACGAGAAGAGGCGGCTTaGCTCCCTCCTGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGREEAA*LPPALT
Trigger: TGTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGGAAGGTGAATCAACGTaGAAATTAGCATCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTEGEST*KLASGP
Trigger: TGGGCCAGATGCTAATTTGCACGTTGATTCACCTTC...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTTGCATCAGTGTTTTGTaGAGAGCTAGTCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFCISVL*RASPDG
Trigger: ACCATCTGGACTAGCTCTCCACAAAACACTGATGCA...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTTGGCTGGTGCAAGGCTaGCCCACTTCAGCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIWLVQG*PTSAAN
Trigger: ATTTGCAGCTGAAGTGGGCCAGCCTTGCACCAGCCA...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAAGTGGGTCCTGCAGTaGGGAAAGAAGCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIKWVLQ*GKKPSP
Trigger: TGGTGAAGGCTTCTTTCCCCACTGCAGGACCCACTT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGGCTCCTCCAAGCTGTaGATATCTCTGGCCATTATC +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHGSSKL*ISLAII
Trigger: GATAATGGCCAGAGATATCCACAGCTTGGAGGAGCC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCAGACAGTAAAGCAGTaGACCAGTTGCTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHQTVKQ*TSCCVG
Trigger: ACCCACACAGCAACTGGTCCACTGCTTTACTGTCTG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGGCAAAATCACCTCCTaGTTGAGAATGATTGCAATA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRGKITS*LRMIAI
Trigger: TATTGCAATCATTCTCAACCAGGAGGTGATTTTGCC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACAGAAGGGGCGCCCTTaGTCATTTGCTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIQKGRP*SFAALF
Trigger: AAAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGTTTGCCATGCACATTTaGAAGCCAATAAGAGCAACA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRFAMHI*KPIRAT
Trigger: TGTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAA...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACATCCCAGCTGCCTTTTaGACAGAGCAGACATCCTTT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHIPAAF*TEQTSF
Trigger: AAAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGAT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCGTATCACTAATCTGTaGGTGTCTTGTTCTGTCACA +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTRITNL*VSCSVT
Trigger: TGTGACAGAACAAGACACTCACAGATTAGTGATACG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACAGCCAGAGACAGGATaGGCCGGGGTCAAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGQPETG*AGVKFL
Trigger: CAGAAACTTGACCCCGGCTCATCCTGTCTCTGGCTG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACTCTCTAAAGTGTTATaGCTAGACCTATCCATGGAT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQLSKVL*LDLSMD
Trigger: ATCCATGGATAGGTCTAGTCATAACACTTTAGAGAG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACTGGATGTGAGGGATTaGACCATGCACACTTGCAAG +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEILDVRD*TMHTCK
Trigger: CTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATTCATTTCCTGGATGTaGGGGATTGAACCATGCACA +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQFISWM*GIEPCT
Trigger: TGTGCATGGTTCAATCCCTCACATCCAGGAAATGAA...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACCGAGTTGTTGTGAGTaGCGTTGGATGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGPSCCE*RWMGRQ
Trigger: CTGCCTCCCCATCCAACGGCACTCACAACAACTCGG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGCATGTTCTACTTCCTaGATGATCACCCTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHACSTS*MITLGK
Trigger: CTTTCCCAGGGTGATCATGCAGGAAGTAGAACATGC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAGGGTTTTCAGTGCTTTaGCGGGCCACAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGGFSVL*RATARD
Trigger: GTCTCTGGCTGTGGCCCGGCAAAGCACTGAAAACCC...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGGCAGCATTCAGAAGTaGACCTCTCCAAAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHGSIQK*TSPKVF
Trigger: AAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTAAGAGGCTGATCCCTTaGCCCAGGATTTACGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIKRLIP*PRIYGR
Trigger: TCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTT...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACCCATTATGTGCCCTTaGACAATAGCAGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIPIMCP*TIAAFR
Trigger: CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAGGCATGGTCAACCCTaGAGTGATTCAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIRHGQP*SDSAAQ
Trigger: TTGTGCAGCTGAATCACTGCAGGGTTGACCATGCCT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTGTGTTCCTCCAACGTaGTTGTTAAGTGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHCVPPT*LLSGLH
Trigger: GTGGAGTCCACTTAACAACCACGTTGGAGGAACACA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCTCCAGTGTGTGGGTTaGCAGGTTGTAGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLILQCVG*QVVESG
Trigger: GCCACTTTCTACAACCTGCCAACCCACACACTGGAG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGTGTCAAAATGTTTTTaGCCGATGGAGAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRVSKCF*PMEKET
Trigger: TGTTTCTTTCTCCATCGGCCAAAAACATTTTGACAC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGTGTTAGAATTGTTATaGGAAGCTGTCACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFVLELL*EAVTLL
Trigger: CAGCAAGGTGACAGCTTCCCATAACAATTCTAACAC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 72 bp TCATTACCCACTCTGGTTGTAAAATACTTCTGGGGCTaGCTCATTCTCCGTCCACACTTAGAGAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SLPTLVVKYFWG*LILRPHLESLG
Trigger: TCCTAAACTCTCTAAGTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATTTTACAACCAGAGTGGGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGATATTTTGGGGTGGATaGTTCTTTGCTGTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTIFWGG*FFAVVG
Trigger: ACCTACAACAGCAAAGAATCATCCACCCCAAAATAT...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCAATACAACACATTTTaGAGTCGGACCCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTQYNTF*SRTQCL
Trigger: CAAACATTGGGTCCGACTTCAAAATGTGTTGTATTG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTTGGGGAGGCAGTGTCTaGATCAGTGTTTTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIWGGSV*ISVLWR
Trigger: TCTCCACAAAACACTGATGCAGACACTGCCTCCCCA...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR GCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACTGGCCCACTTCAGCTaGAAATCAGCCTCCACTCAC +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGLAHFS*KSASTH
Trigger: GTGAGTGGAGGCTGATTTGCAGCTGAAGTGGGCCAG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCAGGACATAAGATGCTaGTTGCTAATATCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTQDIRC*LLISAV
Trigger: AACAGCTGATATTAGCAAGCAGCATCTTATGTCCTG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAATACTTCTGGGGCTTaGTCATTCTCCGTCCACACT +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEINTSGA*SFSVHT
Trigger: AGTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTGGCTTGCCTCCCTCCTaGTCTGACATTCTCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIGLPPS*SDILSK
Trigger: TTTAGAGAGAATGTCAGAGCAGGAGGGAGGCAAGCC...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCGCTCTTTCATCATCTaGAGTCGATGGCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIRSFII*SRWPRR
Trigger: TCTTCTCGGCCATCGACTGCAGATGATGAAAGAGCG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAACTGATATTTTGGGGTaGATGATTCTTTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQTDILG*MILCCC
Trigger: ACAACAGCAAAGAATCATCCACCCCAAAATATCAGT...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAGAAGGCGATGGTTCCTaGGAAGAGGCTGATCCCTTG +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGEGDGS*EEADPL
Trigger: CAAGGGATCAGCCTCTTCCCAGGAACCATCGCCTTC...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGCCATTATCAATAGCTaGTTCTCACTTGTCCTAATG +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQAIINS*FSLVLM
Trigger: CATTAGGACAAGTGAGAATCAGCTATTGATAATGGC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACTTGCTGAATATATCTaGTCTAGGCCCACATCTCTC +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEILAEYI*SRPTSL
Trigger: GAGAGATGTGGGCCTAGAGCAGATATATTCAGCAAG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGTTGCTAAAATCTTCTaGCCAATTCAAAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQVAKIF*PIQKQK
Trigger: TTTCTGCTTTTGAATTGGGCAGAAGATTTTAGCAAC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACTCACCTTTAAAGAATaGTTCTTCTTGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQLTFKE*FFLYQK
Trigger: TTTCTGGTACAAGAAGAACCATTCTTTAAAGGTGAG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGGCAAAATCACCTCCTaGTTGAGAATGATTGCAATA +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQGKITS*LRMIAI
Trigger: TATTGCAATCATTCTCAACCAGGAGGTGATTTTGCC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTACTGATATTTTGGGGTaGATGATTCTTTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFTDILG*MILCCC
Trigger: ACAACAGCAAAGAATCATCCACCCCAAAATATCAGT...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATATCCATGGATAGGATGTaGTTGTTTAGACCCACTGGA +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEISMDRM*LFRPTG
Trigger: TCCAGTGGGTCTAAACAACCACATCCTATCCATGGA...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAGAAATGCAACTCTGCTaGTCACTTGTGGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGEMQLC*SLVGWD
Trigger: ATCCCAGCCCACAAGTGATCAGCAGAGTTGCATTTC...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGCCATTATCAATAGCTaGTTCTCACTTGTCCTAATG +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHAIINS*FSLVLM
Trigger: CATTAGGACAAGTGAGAATCAGCTATTGATAATGGC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCAATCTCGGCACTACTaGTATTTTGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIQSRHY*YFGVDD
Trigger: ATCATCCACCCCAAAATATCAGTAGTGCCGAGATTG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGACTATACCCAGGGTTaGTCATTTATTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: MHIWKPIRATDPLCALAQDYTQG*SFIKAK
Trigger: CTTTGCTTTAATAAATGAGCAACCCTGGGTATAGTC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCAGGACATAAGATGCTaGTTGCTAATATCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHQDIRC*LLISAV
Trigger: AACAGCTGATATTAGCAAGCAGCATCTTATGTCCTG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACATGAAAATGCCTCGTTaGGTAATTGCAGATAGACTA +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHMKMPR*VIADRL
Trigger: TAGTCTATCTGCAATTACTCAACGAGGCATTTTCAT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACTCTCTAAAGTGTTATaGCTAGACCTATCCATGGAT +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEILSKVL*LDLSMD
Trigger: ATCCATGGATAGGTCTAGTCATAACACTTTAGAGAG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACCTTTTTCTTTGGAAATaGAACTCTGCTGATCACTTG +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHLFLWK*NSADHL
Trigger: CAAGTGATCAGCAGAGTTGCATTTCCAAAGAAAAAG...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR TCA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGATTCATTTCCTGGATGTaGGGGATTGAACCATGCACA +
Preference number: 4 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGFISWM*GIEPCT
Trigger: TGTGCATGGTTCAATCCCTCACATCCAGGAAATGAA...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR GCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAATCAGGACATAAGATaGTGCTTGCTAATATCAGCT +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEINQDIR*CLLISA
Trigger: AGCTGATATTAGCAAGCAGCATCTTATGTCCTGATT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACAATGTTTTTGGCCGATaGAGAAAGAAACATATGGAA +
Preference number: 4 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHNVFGR*RKKHME
Trigger: TTCCATATGTTTCTTTCTCCATCGGCCAAAAACATT...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTATCTGTGAGGTAGTATaGGGTGAGGTCAATATGAAA +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIICEVV*GEVNMK
Trigger: TTTCATATTGACCTCACCCCATACTACCTCACAGAT...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAATGTTTTTGGCCGATaGAGAAAGAAACATATGGAA +
Preference number: 4 (lower is better)
Translates to: CCLLISAVTRRQSCRHEINVFGR*RKKHME
Trigger: TTCCATATGTTTCTTTCTCCATCGGCCAAAAACATT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CCA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTGTGCAAATTAGCATCTaGCCCAATTGCAAAATTCAT +
Preference number: 4 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIVQISI*PNCKIH
Trigger: ATGAATTTTGCAATTGGGCCAGATGCTAATTTGCAC...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
3UTR CAA 72 bp ACTTCAGCTAACTTACCCCAAGAGAAAAATCTGGCATaGATCTCTTGGTTAGCATTATTACCAATATCAACT +
Preference number: 4 (lower is better)
Translates to: TSANLPQEKNLA*ISWLALLPIST
Trigger: AGTTGATATTGGTAATAATGCTAACCAAGAGATCAATGCCAGATTTTTCTCTTGGGGTAAGTTAGCTGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS CCA 90 bp GCCGGGTGGGCTGCGGTGGGAGCCGGGAGGCGCGAACAGCTCCAGTaGAGGGCGCGAGGCAAACGAGGCGAACGCAGCGCAGCTCCGTCA +
Preference number: 5 (lower is better)
Translates to: AGWAAVGAGRREQLQ*RARGKRGERSAAPS
Trigger: TGACGGAGCTGCGCTGCGTTCGCCTCGTTTGCCTCGCGCCCTCCACTGGAGCTGTTCGCGCCTCCCGGCTCCCACCGCAGCCCACCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS CCA 90 bp AGCCCGGGGCGGGCGGCAAGGAGTTTGCGGACTGACAGAGCGCACTaGGCGCTGGTAGCGACTCCTCTGCCGGGTGGGCTGCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SPGRAARSLRTDRAH*ALVATPLPGGLRWE
Trigger: CTCCCACCGCAGCCCACCCGGCAGAGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCGCCCCGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 90 bp GAGGGCGCGAGGCAAACGAGGCGAACGCAGCGCAGCTCCGTCAGCTaGGTGCCCTCCGGTGCTCCGCGCTCTTCTGCTCCATCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: EGARQTRRTQRSSVS*VPSGAPRSSAPSQP
Trigger: CGGCTGGGATGGAGCAGAAGAGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCGCTGCGTTCGCCTCGTTTGCCTCGCGCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS TCA 90 bp GTATTTGGTGCCCAGCCCGGGGCGGGCGGCAAGGAGTTTGCGGACTaGCAGAGCGCACTGGGCGCTGGTAGCGACTCCTCTGCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: VFGAQPGAGGKEFAD*QSALGAGSDSSAGW
Trigger: CCACCCGGCAGAGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCGCCCCGGGCTGGGCACCAAATAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 90 bp GGAGATGAGTGTGGGAGGCTCAGCAGCGGACTGCGACAGTGTAGCTaGCACGCCTGCTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGT +
Preference number: 5 (lower is better)
Translates to: GDECGRLSSGLRQCS*HACFRSARAVFLQR
Trigger: ACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGCAGGCGTGGCAGCTACACTGTCGCAGTCCGCTGCTGAGCCTCCCACACTCATCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS GCA 90 bp AGTGGGTGTGTGGTCAGAGCTGGACTCCTCTGTCGGGGACTCTGGTaGAGTTGGAGCTCCAGTGGGTTGGGTGCTGGTCACAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: SGCVVRAGLLCRGLW*SWSSSGLGAGHSGA
Trigger: AGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCTGACCACACACCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCGGGCGGCAAGGAGTTaGCGGACTGACAGAGCGCAC +
Preference number: 5 (lower is better)
Translates to: AISFRQTWTGALPEVKDVRAARS*RTDRAH
Trigger: GTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGGGACTCTGGTGCAGTaGGAGCTCCAGTGGGTTGGG +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICGTLVQ*ELQWVG
Trigger: CCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATCCGAGAAGAGGCGGCTaGCCTCCCTCCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHPRRGG*PPSCSD
Trigger: GTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCGG...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS CCA 90 bp GACTCCTCTGTCGGGGACTCTGGTGCAGTTGGAGCTCCAGTGGGTTaGGTGCTGGTCACAGTGGAGCTATGGTTGGTAGTAACGGAGGCA +
Preference number: 5 (lower is better)
Translates to: DSSVGDSGAVGAPVG*VLVTVELWLVVTEA
Trigger: TGCCTCCGTTACTACCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 90 bp TGTGTGGTCAGAGCTGGACTCCTCTGTCGGGGACTCTGGTGCAGTTaGAGCTCCAGTGGGTTGGGTGCTGGTCACAGTGGAGCTATGGTT +
Preference number: 5 (lower is better)
Translates to: CVVRAGLLCRGLWCS*SSSGLGAGHSGAMV
Trigger: AACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCTGACCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 90 bp CTGCCACGCCTGCTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGTaGTTGTTAAGTGGACTCCACCGCTTGTTGACGAGAACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LPRLLQECPSCVPPT*LLSGLHRLLTRTQK
Trigger: CTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGCAGGCGTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATGGGGTTTTCAGTGCTTaGCCGGGCCACAGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHGVFSA*PGHSQR
Trigger: TCTCTGGCTGTGGCCCGGCAAAGCACTGAAAACCCC...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 90 bp GAGCACCGAGTTGTTGTGAGTGCCGTTGGATGGGGAGGCAGTGTCTaGATCAGTGTTTTGTGGAGAGCTAGTCCAGATGGTGGTCGGTGG +
Preference number: 5 (lower is better)
Translates to: EHRVVVSAVGWGGSV*ISVLWRASPDGGRW
Trigger: CCACCGACCACCATCTGGACTAGCTCTCCACAAAACACTGATGCAGACACTGCCTCCCCATCCAACGGCACTCACAACAACTCGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 90 bp GCTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGTGGTTGTTAAGTaGACTCCACCGCTTGTTGACGAGAACCCAGAAGGTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: ASGVPELCSSNVVVK*TPPLVDENPEGEGS
Trigger: AGACCCCTCACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCAGTGGACTCCACCGCTaGTTGACGAGAACCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICSGLHR*LTRTQK
Trigger: CTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCCCAGAAGGGGCGCCCTaGGTCATTTGCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: AISFRQTWTGALPEVKDVPEGAP*VICCPF
Trigger: AAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTGG...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAG +
Preference number: 5 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVEEADP*PQDLRQ
Trigger: CTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS CCA 90 bp GCAGTTGGAGCTCCAGTGGGTTGGGTGCTGGTCACAGTGGAGCTATaGTTGGTAGTAACGGAGGCAGAAAAGACCTCAGGTGGTGAGGTT +
Preference number: 5 (lower is better)
Translates to: AVGAPVGWVLVTVEL*LVVTEAEKTSGGEV
Trigger: AACCTCACCACCTGAGGTCTTTTCTGCCTCCGTTACTACCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 90 bp GTGAGTGCCGTTGGATGGGGAGGCAGTGTCTGCATCAGTGTTTTGTaGAGAGCTAGTCCAGATGGTGGTCGGTGGTACAATGTTTGTCGG +
Preference number: 5 (lower is better)
Translates to: VSAVGWGGSVCISVL*RASPDGGRWYNVCR
Trigger: CCGACAAACATTGTACCACCGACCACCATCTGGACTAGCTCTCCACAAAACACTGATGCAGACACTGCCTCCCCATCCAACGGCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGACTCCAGTGTGTGGGTaGGCAGGTTGTAGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVTPVCG*AGCRKW
Trigger: CCACTTTCTACAACCTGCCAACCCACACACTGGAGT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCACCCATTATGTGCCCTaGCACAATAGCAGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICTHYVP*HNSSLS
Trigger: CGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGT...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGACAGTGGAGCTATGGTaGGTAGTAACGGAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVTVELW*VVTEAE
Trigger: TTCTGCCTCCGTTACTACCAACCATAGCTCCACTGT...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCGATCCCAGCTGCCTTTaGAACAGAGCAGACATCCTT +
Preference number: 5 (lower is better)
Translates to: AISFRQTWTGALPEVKDVDPSCL*NRADIL
Trigger: AAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATC...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCTGCATGGTAGAATGTTaGGCAGCATTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICCMVEC*AAFLAS
Trigger: AGAAGCCAGGAATGCTGCCAAACATTCTACCATGCA...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAAATACTTCTGGGGCTaGCTCATTCTCCGTCCACAC +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHKYFWG*LILRPH
Trigger: GTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATTT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATATGGATAGGATGTGGTaGTTTAGACCCACTGGAGCC +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHMDRMW*FRPTGA
Trigger: GGCTCCAGTGGGTCTAAACAACCACATCCTATCCAT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGCCTCAGGTGGTGAGGTaGATAGGGATGAGGGTGATG +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRPQVVR*IGMRVM
Trigger: CATCACCCTCATCCCTATCAACCTCACCACCTGAGG...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GAAGAGGCTGATCCCTTGCCCCAGGATTTACGGCAGAGGCAGCATTCAGAAGTGTGCATGGTAGAATGTTaGGCAGCATTCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: EEADPLPQDLRQRQHSEVCMVEC*AAFLAS
Trigger: AGAAGCCAGGAATGCTGCCAAACATTCTACCATGCA...CACTTCTGAATGCTGCCTCTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGGGGTTTTCAGTGCTTaGCCGGGCCACAGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFGVFSA*PGHSQR
Trigger: TCTCTGGCTGTGGCCCGGCAAAGCACTGAAAACCCC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAATGGTAGCCTGGTATTaGGTGCCCAGCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIMVAWY*VPSPGR
Trigger: CCGCCCCGGGCTGGGCACCAAATACCAGGCTACCAT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTCGGTGGTACAATGTTaGTCGGAAGAGAAACAGACA +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHSVVQC*SEEKQT
Trigger: TGTCTGTTTCTCTTCCGACAAACATTGTACCACCGA...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAATGCCTGACACAGTTGTaGGGGGTGTTTTCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQCLTQL*GVFSPG
Trigger: CCCAGGAGAAAACACCCCCAACAACTGTGTCAGGCA...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCACCCATTATGTGCCCTaGCACAATAGCAGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPTHYVP*HNSSLS
Trigger: CGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATACCGAGAAGAGGCGGCTaGCCTCCCTCCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIPRRGG*PPSCSD
Trigger: GTCAGAGCAGGAGGGAGGCAAGCCGCCTCTTCTCGG...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS TCA 90 bp TCTGGACTCTATGGAAATGTTCTTAGGAAGCAGAGATGTTGGGGCTaGTGCTGTAACTGGGAGCACCGAGTTGTTGTGAGTGCCGTTGGA +
Preference number: 5 (lower is better)
Translates to: SGLYGNVLRKQRCWG*CCNWEHRVVVSAVG
Trigger: TCCAACGGCACTCACAACAACTCGGTGCTCCCAGTTACAGCATCAGCCCCAACATCTCTGCTTCCTAAGAACATTTCCATAGAGTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCGGGCGGCAAGGAGTTaGCGGACTGACAGAGCGCAC +
Preference number: 5 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIRAARS*RTDRAH
Trigger: GTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTGTTCCTCCAACGTGGTaGTTAAGTGGACTCCACCGC +
Preference number: 5 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFVPPTW*LSGLHR
Trigger: GCGGTGGAGTCCACTTAACAACCACGTTGGAGGAAC...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACTGGAGCTCCAGTGGGTaGGGTGCTGGTCACAGTGGA +
Preference number: 5 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHWSSSG*GAGHSG
Trigger: TCCACTGTGACCAGCACCCAACCCACTGGAGCTCCA...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGAGCTCACACATCACTTaGCCTGACACAGTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRSSHIT*PDTVVG
Trigger: CCCAACAACTGTGTCAGGCAAAGTGATGTGTGAGCT...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGACATAAGATGCTGCTaGCTAATATCAGCTGTTACA +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICDIRCC*LISAVT
Trigger: TGTAACAGCTGATATTAGCAAGCAGCATCTTATGTC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTACCCACGGACTCCACCGCTTGTaGACGAGAACCCAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FSIFRDMTIPVSPLLITHGLHRL*TRTQKV
Trigger: CACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCC...GTGGGTAATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp ATTTTAGAAATGAAGACACAGACGTGCAGGGAGGGCAGGAGGTTTCACTGGGGCAAACAGGGCTTAAGATaGTCGTTCAATGCGCATCAG +
Preference number: 5 (lower is better)
Translates to: ILEMKTQTCREGRRFHWGKQGLR*SFNAHQ
Trigger: CTGATGCGCATTGAACGACAATCTTAAGCCCTGTTT...GCCCCAGTGAAACCTCCTGCCCTCCCTGCACGTCTGTGTCTTCATTTCTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAAGAGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATAAAGAATGGTTCTTCTaGTACCAGAAAGGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KERQLLKPSTARRGALGHKEWFF*YQKGEV
Trigger: AACTTCCCCTTTCTGGTACAAGAAGAACCATTCTTT...ATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGAAAGCAGTGGACCAGTaGCTGTGTGGGTATAAAGCA +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRKAVDQ*LCGYKA
Trigger: TGCTTTATACCCACACAGCAACTGGTCCACTGCTTT...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AGAGACAGTTACTCAAGCCAAGCACGGCCAGAAGGGGCGCCCTTGGTCATTTGCGAAAAGAAAACAAAGTaGAATCCCGCTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: RDSYSSQARPEGAPLVICEKKTK*NPALSS
Trigger: TGATGAAAGAGCGGGATTCAACTTTGTTTTCTTTTC...GCAAATGACCAAGGGCGCCCCTTCTGGCCGTGCTTGGCTTGAGTAACTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAATGGTAGCCTGGTATTaGGTGCCCAGCCCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGMVAWY*VPSPGR
Trigger: CCGCCCCGGGCTGGGCACCAAATACCAGGCTACCAT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGTCTGCATCAGTGTTTaGTGGAGAGCTAGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQVCISV*WRASPD
Trigger: ATCTGGACTAGCTCTCCACAAAACACTGATGCAGAC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAACCAGGCCATATTCCATaGTTAGGAGTCATCGTACAG +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQPGHIP*LGVIVQ
Trigger: CTGTACGATGACTCCTAACAATGGAATATGGCCTGG...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCATTTCCTTTAGGCAGACCTGGACAGGTGCTCTCCCTGAGGTCAAAGACGTCACAATACAACACATTTaGAAGTCGGACCCAATGTTT +
Preference number: 5 (lower is better)
Translates to: AISFRQTWTGALPEVKDVTIQHI*KSDPMF
Trigger: AAACATTGGGTCCGACTTCAAAATGTGTTGTATTGT...GACGTCTTTGACCTCAGGGAGAGCACCTGTCCAGGTCTGCCTAAAGGAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCCCACATCTCTCTCTTaGCCATGCACATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTPTSLS*PCTFGS
Trigger: GCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATCCAACAGACAGTAAAGCAGTGGACCAGTTGCTGTGTGGGTATAAAGCAAACGCCTGGATGTGAGGGATaGAACCATGCACACTTGCAA +
Preference number: 5 (lower is better)
Translates to: IQQTVKQWTSCCVGIKQTPGCEG*NHAHLQ
Trigger: TTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGG...CGTTTGCTTTATACCCACACAGCAACTGGTCCACTGCTTTACTGTCTGTTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCAAAGAATGGTTCTTCTaGTACCAGAAAGGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPKEWFF*YQKGEV
Trigger: AACTTCCCCTTTCTGGTACAAGAAGAACCATTCTTT...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAGATCCCAGCTGCCTTTaGAACAGAGCAGACATCCTT +
Preference number: 5 (lower is better)
Translates to: MHIWKPIRATDPLCALAQDPSCL*NRADIL
Trigger: AAGGATGTCTGCTCTGTTCAAAAGGCAGCTGGGATC...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAAAAATACTTCTGGGGCTaGCTCATTCTCCGTCCACAC +
Preference number: 5 (lower is better)
Translates to: MHIWKPIRATDPLCALAQKYFWG*LILRPH
Trigger: GTGTGGACGGAGAATGAGCAAGCCCCAGAAGTATTT...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTGAAGAGGCTGATCCCTaGCCCCAGGATTTACGGCAG +
Preference number: 5 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIEEADP*PQDLRQ
Trigger: CTGCCGTAAATCCTGGGGCAAGGGATCAGCCTCTTC...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAACCCACATCTCTCTCTTaGCCATGCACATTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: MHIWKPIRATDPLCALAQPTSLS*PCTFGS
Trigger: GCTTCCAAATGTGCATGGCAAAGAGAGAGATGTGGG...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAATGGGAAGCTGTCACCTaGCTGAATATATCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQWEAVT*LNISAL
Trigger: TAGAGCAGATATATTCAGCAAGGTGACAGCTTCCCA...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp ATGCACATTTGGAAGCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAACCAGGCCATATTCCATaGTTAGGAGTCATCGTACAG +
Preference number: 5 (lower is better)
Translates to: MHIWKPIRATDPLCALAQPGHIP*LGVIVQ
Trigger: CTGTACGATGACTCCTAACAATGGAATATGGCCTGG...TTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGCTTCCAAATGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGACATAAGATGCTGCTaGCTAATATCAGCTGTTACA +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFRDIRCC*LISAVT
Trigger: TGTAACAGCTGATATTAGCAAGCAGCATCTTATGTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp AAGGACAGAGGTCTACGTCTACTGCTGTTAGTGCTCAGGTATCCATCCTGTTTTCTTTGCCATGCACATTaGGAAGCCAATAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: KDRGLRLLLLVLRYPSCFLCHAH*EANKSN
Trigger: GTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAG...AAAACAGGATGGATACCTGAGCACTAACAGCAGTAGACGTAGACCTCTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TGCTTGAGTTCACGGTTTATAGAAGGCGATGGTTCCTGGGAAGAGGCTGATCCCTCTGGCATTGATCTCTaGGTTAGCATTATTACCAAT +
Preference number: 5 (lower is better)
Translates to: CLSSRFIEGDGSWEEADPSGIDL*VSIITN
Trigger: ATTGGTAATAATGCTAACCAAGAGATCAATGCCAGA...GGGATCAGCCTCTTCCCAGGAACCATCGCCTTCTATAAACCGTGAACTCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACCAGAAGGGGCGCCCTaGGTCATTTGCTGCCCTTTT +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGPEGAP*VICCPF
Trigger: AAAAGGGCAGCAAATGACCAAGGGCGCCCCTTCTGG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGAAAAGAAAACAAAGTaGAATCCCGCTCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFREKKTK*NPALSS
Trigger: TGATGAAAGAGCGGGATTCAACTTTGTTTTCTTTTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GCCAATAAGAGCAACAGACCCATTATGTGCCCTTGCACAATAGCAGCCTTTCGGGAGAAAAATCTGGCATaGATCTCTTGGTTAGCATTA +
Preference number: 5 (lower is better)
Translates to: ANKSNRPIMCPCTIAAFREKNLA*ISWLAL
Trigger: TAATGCTAACCAAGAGATCAATGCCAGATTTTTCTC...CCGAAAGGCTGCTATTGTGCAAGGGCACATAATGGGTCTGTTGCTCTTATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTGTTGTTTTCAATATTCAGAGATATGACGATTCCAGTAAGCCCCCTCCTCATTCCTGGATGTGAGGGATaGAACCATGCACACTTGCAA +
Preference number: 5 (lower is better)
Translates to: LLFSIFRDMTIPVSPLLIPGCEG*NHAHLQ
Trigger: TTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGG...AATGAGGAGGGGGCTTACTGGAATCGTCATATCTCTGAATATTGAAAACAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAATCTGGCATTGATCTCTaGGTTAGCATTATTACCAAT +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQSGIDL*VSIITN
Trigger: ATTGGTAATAATGCTAACCAAGAGATCAATGCCAGA...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp GATTTACGGCAGAGGCAGCATTCAGAAGTGCACCTCTCCAAAGGTGTTTCACAAGAGAAAAATCTGGCATaGATCTCTTGGTTAGCATTA +
Preference number: 5 (lower is better)
Translates to: DLRQRQHSEVHLSKGVSQEKNLA*ISWLAL
Trigger: TAATGCTAACCAAGAGATCAATGCCAGATTTTTCTC...TTGTGAAACACCTTTGGAGAGGTGCACTTCTGAATGCTGCCTCTGCCGTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAGTGAGGGGTCTGTGTTaGTGCCTTCCCAATTCGAAC +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGVRGLC*CLPNSN
Trigger: GTTCGAATTGGGAAGGCACAAACACAGACCCCTCAC...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS-3UTR CAA 90 bp TGCTGCTTGCTAATATCAGCTGTTACAAGAAGACAGAGTTGTCGCCATGAAATAAAACAGGGCTTAAGATaGTCGTTCAATGCGCATCAG +
Preference number: 5 (lower is better)
Translates to: CCLLISAVTRRQSCRHEIKQGLR*SFNAHQ
Trigger: CTGATGCGCATTGAACGACAATCTTAAGCCCTGTTT...TATTTCATGGCGACAACTCTGTCTTCTTGTAACAGCTGATATTAGCAAGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAATGGATAGGATGTGGTaGTTTAGACCCACTGGAGCC +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGMDRMW*FRPTGA
Trigger: GGCTCCAGTGGGTCTAAACAACCACATCCTATCCAT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGAAAAGCAGTGGACCAGTaGCTGTGTGGGTATAAAGCA +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGKAVDQ*LCGYKA
Trigger: TGCTTTATACCCACACAGCAACTGGTCCACTGCTTT...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGACTTTGCCATGCACATTaGGAAGCCAATAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGLCHAH*EANKSN
Trigger: GTTGCTCTTATTGGCTTCCAAATGTGCATGGCAAAG...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS-3UTR CAA 90 bp TTCACAAACATTGTGTCAAAATGTTTTTGGCCGATGGAGAAAGAAACATATGGATGGGAAGCTGTCACCTaGCTGAATATATCTGCTCTA +
Preference number: 5 (lower is better)
Translates to: FTNIVSKCFWPMEKETYGWEAVT*LNISAL
Trigger: TAGAGCAGATATATTCAGCAAGGTGACAGCTTCCCA...TCCATATGTTTCTTTCTCCATCGGCCAAAAACATTTTGACACAATGTTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS TCA 72 bp GCCCAGCCCGGGGCGGGCGGCAAGGAGTTTGCGGACTaGCAGAGCGCACTGGGCGCTGGTAGCGACTCCTCT +
Preference number: 6 (lower is better)
Translates to: AQPGAGGKEFAD*QSALGAGSDSS
Trigger: AGAGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCGCCCCGGGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 72 bp AACGCAGCGCAGCTCCGTCAGCTGCGTGCCCTCCGGTaGTCCGCGCTCTTCTGCTCCATCCCAGCCGCCCGA +
Preference number: 6 (lower is better)
Translates to: NAAQLRQLRALR*SALFCSIPAAR
Trigger: TCGGGCGGCTGGGATGGAGCAGAAGAGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCGCTGCGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS CCA 72 bp CGGGCGGCAAGGAGTTTGCGGACTGACAGAGCGCACTaGGCGCTGGTAGCGACTCCTCTGCCGGGTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RAARSLRTDRAH*ALVATPLPGGL
Trigger: CAGCCCACCCGGCAGAGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 72 bp AAACGAGGCGAACGCAGCGCAGCTCCGTCAGCTGCGTaGCCTCCGGTGCTCCGCGCTCTTCTGCTCCATCCC +
Preference number: 6 (lower is better)
Translates to: KRGERSAAPSAA*PPVLRALLLHP
Trigger: GGGATGGAGCAGAAGAGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCGCTGCGTTCGCCTCGTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS GCA 72 bp AGGCAAACGAGGCGAACGCAGCGCAGCTCCGTCAGCTaGGTGCCCTCCGGTGCTCCGCGCTCTTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RQTRRTQRSSVS*VPSGAPRSSAP
Trigger: TGGAGCAGAAGAGCGCGGAGCACCGGAGGGCACGCAGCTGACGGAGCTGCGCTGCGTTCGCCTCGTTTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513238.5
CDS CAA 72 bp TATTTGGTGCCCAGCCCGGGGCGGGCGGCAAGGAGTTaGCGGACTGACAGAGCGCACTGGGCGCTGGTAGCG +
Preference number: 6 (lower is better)
Translates to: YLVPSPGRAARS*RTDRAHWALVA
Trigger: CGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCGCCCCGGGCTGGGCACCAAATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS CAA 90 bp GTAGCCTGGTATTTGGTGCCCAGCCCGGGGCGGGCGGCAAGGAGTTaGCGGACTGACAGAGCGCACTGGGCGCTGGTAGCGACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: VAWYLVPSPGRAARS*RTDRAHWALVATPL
Trigger: CAGAGGAGTCGCTACCAGCGCCCAGTGCGCTCTGTCAGTCCGCAAACTCCTTGCCGCCCGCCCCGGGCTGGGCACCAAATACCAGGCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307428.7
ENST00000513238.5
CDS GCA 72 bp TGTGGGAGGCTCAGCAGCGGACTGCGACAGTGTAGCTaGCACGCCTGCTTCAGGAGTGCCCGAGCTGTGTTC +
Preference number: 6 (lower is better)
Translates to: CGRLSSGLRQCS*HACFRSARAVF
Trigger: GAACACAGCTCGGGCACTCCTGAAGCAGGCGTGGCAGCTACACTGTCGCAGTCCGCTGCTGAGCCTCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS GCA 72 bp CTCAGCAGCGGACTGCGACAGTGTAGCTGCCACGCCTaGTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGT +
Preference number: 6 (lower is better)
Translates to: LSSGLRQCSCHA*FRSARAVFLQR
Trigger: ACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGCAGGCGTGGCAGCTACACTGTCGCAGTCCGCTGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS GCA 72 bp GTGGTCAGAGCTGGACTCCTCTGTCGGGGACTCTGGTaGAGTTGGAGCTCCAGTGGGTTGGGTGCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: VVRAGLLCRGLW*SWSSSGLGAGH
Trigger: GTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCTGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp CCTCTGTCGGGGACTCTGGTGCAGTTGGAGCTCCAGTaGGTTGGGTGCTGGTCACAGTGGAGCTATGGTTGG +
Preference number: 6 (lower is better)
Translates to: PLSGTLVQLELQ*VGCWSQWSYGW
Trigger: CCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp AGAGCTGGACTCCTCTGTCGGGGACTCTGGTGCAGTTaGAGCTCCAGTGGGTTGGGTGCTGGTCACAGTGGA +
Preference number: 6 (lower is better)
Translates to: RAGLLCRGLWCS*SSSGLGAGHSG
Trigger: TCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp TGTGTGGTCAGAGCTGGACTCCTCTGTCGGGGACTCTaGTGCAGTTGGAGCTCCAGTGGGTTGGGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: CVVRAGLLCRGL*CSWSSSGLGAG
Trigger: ACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCTGACCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp TCTCCTGGGGTACTGGCTCAGCTGTGGCATGTGAAGTaGGTGTGTGGTCAGAGCTGGACTCCTCTGTCGGGG +
Preference number: 6 (lower is better)
Translates to: SPGVLAQLWHVK*VCGQSWTPLSG
Trigger: CCCCGACAGAGGAGTCCAGCTCTGACCACACACCCACTTCACATGCCACAGCTGAGCCAGTACCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp GGACTCCTCTGTCGGGGACTCTGGTGCAGTTGGAGCTCCAGTGGGTaGGGTGCTGGTCACAGTGGAGCTATGGTTGGTAGTAACGGAGGC +
Preference number: 6 (lower is better)
Translates to: GLLCRGLWCSWSSSG*GAGHSGAMVGSNGG
Trigger: GCCTCCGTTACTACCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp GTGTGTGGTCAGAGCTGGACTCCTCTGTCGGGGACTCTGGTGCAGTaGGAGCTCCAGTGGGTTGGGTGCTGGTCACAGTGGAGCTATGGT +
Preference number: 6 (lower is better)
Translates to: VCGQSWTPLSGTLVQ*ELQWVGCWSQWSYG
Trigger: ACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGACAGAGGAGTCCAGCTCTGACCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp CCACGCCTGCTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGTGGTaGTTAAGTGGACTCCACCGCTTGTTGACGAGAACCCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: PRLLQECPSCVPPTW*LSGLHRLLTRTQKV
Trigger: CACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGCAGGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS TCA 72 bp GGGGCTGATGCTGTAACTGGGAGCACCGAGTTGTTGTaGGTGCCGTTGGATGGGGAGGCAGTGTCTGCATCA +
Preference number: 6 (lower is better)
Translates to: GADAVTGSTELL*VPLDGEAVSAS
Trigger: TGATGCAGACACTGCCTCCCCATCCAACGGCACTCACAACAACTCGGTGCTCCCAGTTACAGCATCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp GTCGGGGACTCTGGTGCAGTTGGAGCTCCAGTGGGTTaGGTGCTGGTCACAGTGGAGCTATGGTTGGTAGTA +
Preference number: 6 (lower is better)
Translates to: VGDSGAVGAPVG*VLVTVELWLVV
Trigger: TACTACCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGCTCCAACTGCACCAGAGTCCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 72 bp GCCGTTGGATGGGGAGGCAGTGTCTGCATCAGTGTTTaGTGGAGAGCTAGTCCAGATGGTGGTCGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: AVGWGGSVCISV*WRASPDGGRWY
Trigger: GTACCACCGACCACCATCTGGACTAGCTCTCCACAAAACACTGATGCAGACACTGCCTCCCCATCCAACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp GTGCCCGAGCTGTGTTCCTCCAACGTGGTTGTTAAGTaGACTCCACCGCTTGTTGACGAGAACCCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: VPELCSSNVVVK*TPPLVDENPEG
Trigger: ACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp CTGCTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGTaGTTGTTAAGTGGACTCCACCGCTTGTTGACGAGA +
Preference number: 6 (lower is better)
Translates to: LLQECPSCVPPT*LLSGLHRLLTR
Trigger: TCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCACTCCTGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp GCTCCAGTGGGTTGGGTGCTGGTCACAGTGGAGCTATaGTTGGTAGTAACGGAGGCAGAAAAGACCTCAGGT +
Preference number: 6 (lower is better)
Translates to: APVGWVLVTVEL*LVVTEAEKTSG
Trigger: ACCTGAGGTCTTTTCTGCCTCCGTTACTACCAACCATAGCTCCACTGTGACCAGCACCCAACCCACTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 72 bp CTTCAGGAGTGCCCGAGCTGTGTTCCTCCAACGTGGTaGTTAAGTGGACTCCACCGCTTGTTGACGAGAACC +
Preference number: 6 (lower is better)
Translates to: LQECPSCVPPTW*LSGLHRLLTRT
Trigger: GGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGGGCACTCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp AGCTGTGTTCCTCCAACGTGGTTGTTAAGTGGACTCCACCGCTTGTaGACGAGAACCCAGAAGGTGAGGGGTCTGTGTTTGTGCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SCVPPTWLLSGLHRL*TRTQKVRGLCLCLP
Trigger: GGGAAGGCACAAACACAGACCCCTCACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp CCGAGCTGTGTTCCTCCAACGTGGTTGTTAAGTGGACTCCACCGCTaGTTGACGAGAACCCAGAAGGTGAGGGGTCTGTGTTTGTGCCTT +
Preference number: 6 (lower is better)
Translates to: PSCVPPTWLLSGLHR*LTRTQKVRGLCLCL
Trigger: AAGGCACAAACACAGACCCCTCACCTTCTGGGTTCTCGTCAACAAGCGGTGGAGTCCACTTAACAACCACGTTGGAGGAACACAGCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp ACTTTGCCTGACACAGTTGTTGGGGGTGTTTTCTCCTaGGGTACTGGCTCAGCTGTGGCATGTGAAGTGGGT +
Preference number: 6 (lower is better)
Translates to: TLPDTVVGGVFS*GTGSAVACEVG
Trigger: ACCCACTTCACATGCCACAGCTGAGCCAGTACCCCAGGAGAAAACACCCCCAACAACTGTGTCAGGCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp GTTGGATGGGGAGGCAGTGTCTGCATCAGTGTTTTGTaGAGAGCTAGTCCAGATGGTGGTCGGTGGTACAAT +
Preference number: 6 (lower is better)
Translates to: VGWGGSVCISVL*RASPDGGRWYN
Trigger: ATTGTACCACCGACCACCATCTGGACTAGCTCTCCACAAAACACTGATGCAGACACTGCCTCCCCATCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 90 bp GTTGTGAGTGCCGTTGGATGGGGAGGCAGTGTCTGCATCAGTGTTTaGTGGAGAGCTAGTCCAGATGGTGGTCGGTGGTACAATGTTTGT +
Preference number: 6 (lower is better)
Translates to: VVSAVGWGGSVCISV*WRASPDGGRWYNVC
Trigger: ACAAACATTGTACCACCGACCACCATCTGGACTAGCTCTCCACAAAACACTGATGCAGACACTGCCTCCCCATCCAACGGCACTCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CAA 72 bp GTGGTGGTCTCCATGTCTATGAGCTCACACATCACTTaGCCTGACACAGTTGTTGGGGGTGTTTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VVVSMSMSSHIT*PDTVVGGVFSW
Trigger: CCAGGAGAAAACACCCCCAACAACTGTGTCAGGCAAAGTGATGTGTGAGCTCATAGACATGGAGACCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS TCA 72 bp CTGTGTTTGTGCCTTCCCAATTCGAACCTGGGCTGGTaGTCTCCTCTTCTCTGGACTCTATGGAAATGTTCT +
Preference number: 6 (lower is better)
Translates to: LCLCLPNSNLGW*SPLLWTLWKCS
Trigger: AGAACATTTCCATAGAGTCCAGAGAAGAGGAGATCACCAGCCCAGGTTCGAATTGGGAAGGCACAAACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS TCA 72 bp TACAATGTTTGTCGGAAGAGAAACAGACAAAGGAGCTaGTGTAGGCAGACTCTGTACCCTCCATCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: YNVCRKRNRQRS*CRQTLYPPSCS
Trigger: ACTGCAGGATGGAGGGTACAGAGTCTGCCTACATCAGCTCCTTTGTCTGTTTCTCTTCCGACAAACATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS TCA 72 bp TATGGAAATGTTCTTAGGAAGCAGAGATGTTGGGGCTaGTGCTGTAACTGGGAGCACCGAGTTGTTGTGAGT +
Preference number: 6 (lower is better)
Translates to: YGNVLRKQRCWG*CCNWEHRVVVS
Trigger: ACTCACAACAACTCGGTGCTCCCAGTTACAGCATCAGCCCCAACATCTCTGCTTCCTAAGAACATTTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7
CDS CCA 72 bp AGTGTTTTGTGGAGAGCTAGTCCAGATGGTGGTCGGTaGTACAATGTTTGTCGGAAGAGAAACAGACAAAGG +
Preference number: 6 (lower is better)
Translates to: SVLWRASPDGGR*YNVCRKRNRQR
Trigger: CCTTTGTCTGTTTCTCTTCCGACAAACATTGTACCACCGACCACCATCTGGACTAGCTCTCCACAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307428.7