RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARG (Homo sapiens)

Ensembl gene IDs: ENSG00000227345

Ensembl transcript IDs: ENST00000402038.7, ENST00000492350.2, ENST00000497481.1, ENST00000610922.1, ENST00000614063.4, ENST00000616448.2

Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTCTCTGCACAGGACTCGACAGCATGG +
Preference number: 1 (lower is better)
Translates to: VGGDAIRSAPQVPVL*PEWSAVSAQDSTAW
Trigger: CCATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 90 bp AGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGCACAGGACTCGACAGCATGGTATAT +
Preference number: 1 (lower is better)
Translates to: RRCYSLGSSGPCPLP*MVSGLCTGLDSMVY
Trigger: ATATACCATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 90 bp GCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGGCAACGATCTCAGTGCAGCGCCGCT +
Preference number: 1 (lower is better)
Translates to: ARVSFSQAQTDRGSV*SEEHRWQRSQCSAA
Trigger: AGCGGCGCTGCACTGAGATCGTTGCCATCGATGCTCTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 90 bp GATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAGGACTCGACAGCATGGTATATGAAT +
Preference number: 1 (lower is better)
Translates to: DAIRSAPQVPVLCPE*SAVSAQDSTAWYMN
Trigger: ATTCATATACCATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 90 bp ACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTaGTATAATATATGGGCAGGAAGAAAGAGACCCGACAGGCTGAGC +
Preference number: 1 (lower is better)
Translates to: TCFLASLASAGCRSN*YNIWAGRKRPDRLS
Trigger: GCTCAGCCTGTCGGGTCTCTTTCTTCCTGCCCATATATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 90 bp TTAACCTGGCATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTaGCCACTGCAGAAAGATTCTCTGAAGAAACTCCAGGACGGAGAA +
Preference number: 1 (lower is better)
Translates to: LTWHHPQRHHSPSFL*PLQKDSLKKLQDGE
Trigger: TTCTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATGCCAGGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 90 bp GGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAGAAATCCACAGTAAGCCTTGTTCAG +
Preference number: 1 (lower is better)
Translates to: GTTAPVSCGHCRKIL*RNSRTEKSTVSLVQ
Trigger: CTGAACAAGGCTTACTGTGGATTTCTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 90 bp TCAATTCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCT +
Preference number: 1 (lower is better)
Translates to: SIHILHLTAQTGRLW*EVGGDAIRSAPQVP
Trigger: AGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 90 bp AAGTCAATTCATATATTACACCTGACAGCTCAAACAGGACGTCTCTaGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTC +
Preference number: 1 (lower is better)
Translates to: KSIHILHLTAQTGRL*WEVGGDAIRSAPQV
Trigger: GACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAATTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR GCA 90 bp TCCTGGATTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTaGAGAAGCAACTGGTATAATATATGGGCAGGAAGAAAGAGACCC +
Preference number: 1 (lower is better)
Translates to: SWISTCFLASLASAG*RSNWYNIWAGRKRP
Trigger: GGGTCTCTTTCTTCCTGCCCATATATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 90 bp ATGGTCAGCGGTCTCTGCACAGGACTCGACAGCATGGTATATGAATaGATAAAGCTTGATGTCTGGTCCAGGGGTGGAACAGTTTCTGCA +
Preference number: 1 (lower is better)
Translates to: MVSGLCTGLDSMVYE*IKLDVWSRGGTVSA
Trigger: TGCAGAAACTGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 90 bp CTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCAACTaGCAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAA +
Preference number: 1 (lower is better)
Translates to: LSPRESGWREFRCTN*QLHMCGRDCVLDYK
Trigger: TTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR TCA 90 bp GCAACTGGTATAATATATGGGCAGGAAGAAAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGGACAA +
Preference number: 1 (lower is better)
Translates to: ATGIIYGQEERDPTG*AQPSMGFHKRSDGQ
Trigger: TTGTCCATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCTGCCCATATATTATACCAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 90 bp TCAGTTAAAGAGATTCCTGGATTTCAACTTGTTTCCTGGCATCGCTaGCATCTGCGGGCTGCAGAAGCAACTGGTATAATATATGGGCAG +
Preference number: 1 (lower is better)
Translates to: SVKEIPGFQLVSWHR*HLRAAEATGIIYGQ
Trigger: CTGCCCATATATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAATCTCTTTAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR TCA 90 bp TGTGCATGCTGTAAATGTCTCTCATCAATTCTGAGTCCCCAAAGGTaGAATAAACCACATCTCGCTCAGCTGCAGCAGCTGCCAATATCT +
Preference number: 1 (lower is better)
Translates to: CACCKCLSSILSPQR*NKPHLAQLQQLPIS
Trigger: AGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTGGTTTATTTCACCTTTGGGGACTCAGAATTGATGAGAGACATTTACAGCATGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 90 bp ATGGGCAGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATaGGATTTCACAAGAGATCTGATGGACAAAAGAAATAAACATCAA +
Preference number: 1 (lower is better)
Translates to: MGRKKETRQAEHNLP*DFTRDLMDKRNKHQ
Trigger: TTGATGTTTATTTCTTTTGTCCATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCTGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR CCA 90 bp ACAGGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTTTCTGCATTCTTCATTGTAGTATCG +
Preference number: 1 (lower is better)
Translates to: TGLDSMVYEWIKLDV*SRGGTVSAFFIVVS
Trigger: CGATACTACAATGAAGAATGCAGAAACTGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp TCTGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTCAGTGCAGCGCCGCTaGCAGTCGTCCCTTTCACTC +
Preference number: 2 (lower is better)
Translates to: SGGRWEEMLFARLLRSLSSVQRR*QSSLSL
Trigger: GAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGA...GGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGGCAACGATCTCAGTaGAGCGCCGCTGCCAGTCGT +
Preference number: 2 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLWQRSQ*SAAASR
Trigger: ACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCA...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTTCAGTGCAGCGCCGCTaGCAGTCGTCCCTTTCACTC +
Preference number: 2 (lower is better)
Translates to: LFARLLRSLSFALNGQRSSVQRR*QSSLSL
Trigger: GAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGA...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp GGCATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGG +
Preference number: 2 (lower is better)
Translates to: GITPKGTTAPVSCGHCRKDRGSV*SEEHRW
Trigger: CCATCGATGCTCTTCACTTCAGACGCTACCTCGATC...CTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTCCACGTGAGTCAGGATaGAGGGAGTTTAGATGTACC +
Preference number: 2 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLPRESG*REFRCT
Trigger: GGTACATCTAAACTCCCTCCATCCTGACTCACGTGG...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR CCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTAGTGAAGAGCATCGATaGCAACGATCTCAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLSEEHR*QRSQCS
Trigger: GCTGCACTGAGATCGTTGCCATCGATGCTCTTCACT...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGGTTTCCTGGCATCGCTaGCATCTGCGGGCTGCAGAA +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMVSWHR*HLRAAE
Trigger: TTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAAC...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp CCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCAGCATAGCTCACTCCCATCTTCGTaGCTCCGGGACCAACGATAT +
Preference number: 2 (lower is better)
Translates to: PFHSHLRGSGTNDMSQHSSLPSS*LRDQRY
Trigger: ATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGA...GCTATGCTGAGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTTTAAGGCTTTTAACCTaGCATCACCCCCAAAGGCAC +
Preference number: 2 (lower is better)
Translates to: LFARLLRSLSFALNGQRSLRLLT*HHPQRH
Trigger: GTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAA...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp TCTGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 2 (lower is better)
Translates to: SGGRWEEMLFARLLRSLSMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...GGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp CCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 2 (lower is better)
Translates to: PCSARVSFSQAQTDRGSVVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...GACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCT +
Preference number: 2 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRTGRLW*EVGGDA
Trigger: AGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGT...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR CCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT +
Preference number: 2 (lower is better)
Translates to: LFARLLRSLSFALNGQRSIKLDV*SRGGTV
Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp CCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAG +
Preference number: 2 (lower is better)
Translates to: PCSARVSFSQAQTDRGSVVLCPE*SAVSAQ
Trigger: CTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGAC...GACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp CCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTCACTCCCATCTTCGTaGCTCCGGGACCAACGATAT +
Preference number: 2 (lower is better)
Translates to: PCSARVSFSQAQTDRGSVSLPSS*LRDQRY
Trigger: ATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGA...GACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp GCCAGTCGTCCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 2 (lower is better)
Translates to: ASRPFHSHLRGSGTNDMSFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...AGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGGACGACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp AAACTGATCGAGGTAGCGTCTGAAGTGAAGAGCATCGATGGCAACGATCTCAGTGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 2 (lower is better)
Translates to: KLIEVASEVKSIDGNDLSVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...ACTGAGATCGTTGCCATCGATGCTCTTCACTTCAGACGCTACCTCGATCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATACCACGTGAGTCAGGATaGAGGGAGTTTAGATGTACC +
Preference number: 2 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIPRESG*REFRCT
Trigger: GGTACATCTAAACTCCCTCCATCCTGACTCACGTGG...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGTTTCAACTTGTTTCCTaGCATCGCTGGCATCTGCGG +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMFQLVS*HRWHLR
Trigger: CCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp GGCATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: GITPKGTTAPVSCGHCRKSMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...CTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGA +
Preference number: 2 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNRDPTG*AQPSMG
Trigger: TCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCT...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR TCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMCRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR TCA 90 bp CCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCAGCATAGCGTCTCTCATCAATTCTaGGTCCCCAAAGGTGAAATA +
Preference number: 2 (lower is better)
Translates to: PFHSHLRGSGTNDMSQHSVSHQF*VPKGEI
Trigger: TATTTCACCTTTGGGGACTCAGAATTGATGAGAGAC...GCTATGCTGAGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTGAGCACAACCTTCCATaGGATTTCACAAGAGATCTG +
Preference number: 2 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGEHNLP*DFTRDL
Trigger: CAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTC...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp CAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAGGAGCACAACCTTCCATaGGATTTCACAAGAGATCTG +
Preference number: 2 (lower is better)
Translates to: QRHHSPSFLWPLQKDSLKEHNLP*DFTRDL
Trigger: CAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTC...CTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR TCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 2 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR TCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTTTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 2 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR TCA 90 bp CCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAATTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 2 (lower is better)
Translates to: PKAPQPQFPVATAERFSEFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...TTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp ACATCTCGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGCACATCTCGCTCAGCTaGAGCAGCTGCCAATATCTG +
Preference number: 2 (lower is better)
Translates to: TSRSAAAAANICIKAFNLHISLS*SSCQYL
Trigger: CAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTG...CAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMVVLAG*KYLADR
Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR CCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 2 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR CCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 2 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGGGCTGCAGAAGCAACTaGTATAATATATGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMGCRSN*YNIWAG
Trigger: TCCTGCCCATATATTATACCAGTTGCTTCTGCAGCC...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp CCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA +
Preference number: 2 (lower is better)
Translates to: PCSARVSFSQAQTDRGSVRSGIG*VQIFGR
Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...GACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR TCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR TCA 90 bp GGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTATATCTAAGTCCACGTaGGTCAGGATGGAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: GLDSMVYEWIKLDVWSRGISKST*VRMEGV
Trigger: AACTCCCTCCATCCTGACTCACGTGGACTTAGATAT...ACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614063.4
3UTR-3UTR TCA 90 bp CGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGGCATCATGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 2 (lower is better)
Translates to: RSAAAAANICIKAFNLASCRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...TGATGCCAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGATTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 2 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR GCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATAATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 2 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGAACTGGTATAATATATaGGCAGGAAGAAAGAGACCC +
Preference number: 2 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMNWYNI*AGRKRP
Trigger: GGGTCTCTTTCTTCCTGCCCATATATTATACCAGTT...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR TCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATCTGAGTCCCCAAAGGTaGAATAAACCACATCTCGCT +
Preference number: 2 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNLSPQR*NKPHLA
Trigger: AGCGAGATGTGGTTTATTTCACCTTTGGGGACTCAG...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR GCA 90 bp GCCAATATCTGTATTAAGGCTTTTAACCTGGCATCACCCCCAAAGGCACCACAGATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 2 (lower is better)
Translates to: ANICIKAFNLASPPKAPQMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...CTGTGGTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAATACAGATATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 2 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR GCA 90 bp GGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTGTGTATTCACTGTACTaGTCAGTACCTGTGATAATT +
Preference number: 2 (lower is better)
Translates to: GLDSMVYEWIKLDVWSRGVYSLY*SVPVII
Trigger: AATTATCACAGGTACTGAGCAGTACAGTGAATACAC...ACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CCA 90 bp ACATCTCGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 2 (lower is better)
Translates to: TSRSAAAAANICIKAFNLSMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...CAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR TCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCAAGAGATTGCGTCCTTaGCTACAAATGTGGATTATG +
Preference number: 2 (lower is better)
Translates to: NKTYLSPRESGWREFRCTKRLRP*LQMWIM
Trigger: CATAATCCACATTTGTAGTCAAGGACGCAATCTCTT...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR GCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 2 (lower is better)
Translates to: NKTYLSPRESGWREFRCTMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR CCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATCCAGTTCTCAAACTTTaGTTATATGAATATGCCTCA +
Preference number: 2 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNPVLKL*LYEYAS
Trigger: TGAGGCATATTCATATAACCAAAGTTTGAGAACTGG...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CAA 90 bp GATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTaGACTACAAATGTGGATTATGTACACATTTATATTAACTTAAGT +
Preference number: 2 (lower is better)
Translates to: DVPTDNCTCVEEIAS*TTNVDYVHIYINLS
Trigger: ACTTAAGTTAATATAAATGTGTACATAATCCACATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
3UTR TCA 72 bp TATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGCACAGGACTCGACAGC +
Preference number: 3 (lower is better)
Translates to: YSLGSSGPCPLP*MVSGLCTGLDS
Trigger: GCTGTCGAGTCCTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR GCA 72 bp GATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTCTCTGCACAGGACTCG +
Preference number: 3 (lower is better)
Translates to: DAIRSAPQVPVL*PEWSAVSAQDS
Trigger: CGAGTCCTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 72 bp CTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTaGTATAATATATGGGCAGGAAGAAAGAGACCCGAC +
Preference number: 3 (lower is better)
Translates to: LASLASAGCRSN*YNIWAGRKRPD
Trigger: GTCGGGTCTCTTTCTTCCTGCCCATATATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 72 bp ATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCT +
Preference number: 3 (lower is better)
Translates to: ILHLTAQTGRLW*EVGGDAIRSAP
Trigger: AGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 72 bp GCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAGAAATCCACAGTAAGC +
Preference number: 3 (lower is better)
Translates to: APVSCGHCRKIL*RNSRTEKSTVS
Trigger: GCTTACTGTGGATTTCTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR GCA 72 bp TCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTaGAGAAGCAACTGGTATAATATATGGGCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: STCFLASLASAG*RSNWYNIWAGR
Trigger: TCTTCCTGCCCATATATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 72 bp GGTCTCTGCACAGGACTCGACAGCATGGTATATGAATaGATAAAGCTTGATGTCTGGTCCAGGGGTGGAACA +
Preference number: 3 (lower is better)
Translates to: GLCTGLDSMVYE*IKLDVWSRGGT
Trigger: TGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCCTGTGCAGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR TCA 72 bp CGTGAGTCAGGATGGAGGGAGTTTAGATGTACCAACTaGCAACTGCACATGTGTGGAAGAGATTGCGTCCTT +
Preference number: 3 (lower is better)
Translates to: RESGWREFRCTN*QLHMCGRDCVL
Trigger: AAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATCCTGACTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
3UTR TCA 72 bp TCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGGCAACGATCTCAGTGC +
Preference number: 3 (lower is better)
Translates to: SFSQAQTDRGSV*SEEHRWQRSQC
Trigger: GCACTGAGATCGTTGCCATCGATGCTCTTCACTTCAGACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 72 bp GAGATTCCTGGATTTCAACTTGTTTCCTGGCATCGCTaGCATCTGCGGGCTGCAGAAGCAACTGGTATAATA +
Preference number: 3 (lower is better)
Translates to: EIPGFQLVSWHR*HLRAAEATGII
Trigger: TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR CCA 72 bp TCAGTTAAAGAGATTCCTGGATTTCAACTTGTTTCCTaGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACT +
Preference number: 3 (lower is better)
Translates to: SVKEIPGFQLVS*HRWHLRAAEAT
Trigger: AGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAATCTCTTTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CAA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 3 (lower is better)
Translates to: RKKETRQAEHNLPWDFTREEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR TCA 72 bp ATAATATATGGGCAGGAAGAAAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGATTTCACAAGAGATCT +
Preference number: 3 (lower is better)
Translates to: IIYGQEERDPTG*AQPSMGFHKRS
Trigger: AGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCTGCCCATATATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR-3UTR CAA 90 bp GGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 3 (lower is better)
Translates to: GLDSMVYEWIKLDVWSRGEEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...ACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR CCA 72 bp AAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATaGGATTTCACAAGAGATCTGATGGACAAAAGAAAT +
Preference number: 3 (lower is better)
Translates to: KKETRQAEHNLP*DFTRDLMDKRN
Trigger: ATTTCTTTTGTCCATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
3UTR CCA 72 bp GACAGCATGGTATATGAATGGATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTTTCTGCATTCTTCATT +
Preference number: 3 (lower is better)
Translates to: DSMVYEWIKLDV*SRGGTVSAFFI
Trigger: AATGAAGAATGCAGAAACTGTTCCACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
3UTR-3UTR CAA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACATTCCTGGATTTCAACTaGTTTCCTGGCATCGCTGGC +
Preference number: 3 (lower is better)
Translates to: PVLKLWLYEYASSTTKETFLDFN*FPGIAG
Trigger: GCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAA...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR-3UTR CAA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATTTTAACCTAGGAGGTTaGCATTATGCAACACATATG +
Preference number: 3 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNFNLGG*HYATHM
Trigger: CATATGTGTTGCATAATGCAAACCTCCTAGGTTAAA...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
3UTR TCA 72 bp ATTTATATTAACTTAAGTCAATTCATATATTACACCTaGCAGCTCAAACAGGACGTCTCTGGTGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: IYINLSQFIYYT*QLKQDVSGGRW
Trigger: CCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAATTGACTTAAGTTAATATAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TCTGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 4 (lower is better)
Translates to: SGGRWEEMLFARLLRSLSVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...GGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp CGATGGCAACGATCTCAGTGCAGCGCCGCTGCCAGTCGTCCCTTTCACTCCCATACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: RWQRSQCSAAASRPFHSHTGRLW*EVGGDA
Trigger: AGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGT...ATGGGAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp CATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCAGTGCAGCGCCGCTaGCAGTCGTCCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: HHPQRHHSPSFLWPLQKDSVQRR*QSSLSL
Trigger: GAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGA...ATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp CATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTGGCAACGATCTCAGTaGAGCGCCGCTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: HHPQRHHSPSFLWPLQKDWQRSQ*SAAASR
Trigger: ACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCA...ATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTATGGTCAGCGGTCTCTaGACAGGACTCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLMVSGL*TGLDSM
Trigger: CATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCAT...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLVLCPE*SAVSAQ
Trigger: CTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGAC...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp TGGTGGGAGGTGGGAGGAGATGCTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTGTCTCTGGTGGGAGGTaGGAGGAGATGCTATTCGCT +
Preference number: 4 (lower is better)
Translates to: WWEVGGDAIRSAPQVPVLVSGGR*EEMLFA
Trigger: AGCGAATAGCATCTCCTCCCACCTCCCACCAGAGAC...AAGGACAGGGACCTGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: HHPQRHHSPSFLWPLQKDRDPTG*AQPSMG
Trigger: TCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCT...ATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614063.4
CDS-3UTR GCA 90 bp CATCGATGGCAACGATCTCAGTGCAGCGCCGCTGCCAGTCGTCCCTTTCACTCCCACATCTCGCTCAGCTaGAGCAGCTGCCAATATCTG +
Preference number: 4 (lower is better)
Translates to: HRWQRSQCSAAASRPFHSHISLS*SSCQYL
Trigger: CAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTG...GGAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCATCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTATGGTCAGCGGTCTCTaGACAGGACTCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: LFARLLRSLSFALNGQRSMVSGL*TGLDSM
Trigger: CATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCAT...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGG +
Preference number: 4 (lower is better)
Translates to: LFARLLRSLSFALNGQRSDRGSV*SEEHRW
Trigger: CCATCGATGCTCTTCACTTCAGACGCTACCTCGATC...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGCCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRPCPLP*MVSGLC
Trigger: GCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGG...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGRDPTG*AQPSMG
Trigger: TCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCT...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGQVPVL*PEWSAV
Trigger: GACCGCTGACCATTCAGGGCAAAGGACAGGGACCTG...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp AAGCCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCTGGCAACGATCTCAGTaGAGCGCCGCTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: KPCSARVSFSQAQTDRGSWQRSQ*SAAASR
Trigger: ACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCA...GCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATGGTCAGCGGTCTCTaGACAGGACTCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGMVSGL*TGLDSM
Trigger: CATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCAT...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRQVPVL*PEWSAV
Trigger: GACCGCTGACCATTCAGGGCAAAGGACAGGGACCTG...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGGAGGTGGGAGGAGATaGTATTCGCTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGGGGRR*YSLGSS
Trigger: TGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCC...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGGGAGGTGGGAGGAGATaGTATTCGCTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRGGGRR*YSLGSS
Trigger: TGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCC...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATAGCCCCAGTTTCCTGTaGCCACTGCAGAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: HHPQRHHSPSFLWPLQKDSPSFL*PLQKDS
Trigger: AGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCT...ATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp CTATTCGCTCGGCTCCTCAGGTCCCTGTCCTTTGCCCTGAATGGTCAGCGGTCTTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: LFARLLRSLSFALNGQRSCLVQG*NSFCIL
Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...AGACCGCTGACCATTCAGGGCAAAGGACAGGGACCTGAGGAGCCGAGCGAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp GGCATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: GITPKGTTAPVSCGHCRKIKLDV*SRGGTV
Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...CTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp GCCAGTCGTCCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCCACGTGAGTCAGGATaGAGGGAGTTTAGATGTACC +
Preference number: 4 (lower is better)
Translates to: ASRPFHSHLRGSGTNDMSPRESG*REFRCT
Trigger: GGTACATCTAAACTCCCTCCATCCTGACTCACGTGG...AGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGGACGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614063.4
CDS-3UTR TCA 90 bp GCCAGTCGTCCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCTGAGTCCCCAAAGGTaGAATAAACCACATCTCGCT +
Preference number: 4 (lower is better)
Translates to: ASRPFHSHLRGSGTNDMSLSPQR*NKPHLA
Trigger: AGCGAGATGTGGTTTATTTCACCTTTGGGGACTCAG...AGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGGACGACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp GCCAATATCTGTATTAAGGCTTTTAACCTGGCATCACCCCCAAAGGCACCACAGCCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ANICIKAFNLASPPKAPQPCPLP*MVSGLC
Trigger: GCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGG...CTGTGGTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAATACAGATATTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CATCGATGGCAACGATCTCAGTGCAGCGCCGCTGCCAGTCGTCCCTTTCACTCCTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 4 (lower is better)
Translates to: HRWQRSQCSAAASRPFHSFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...GGAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCATCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp CAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAGCACATCTCGCTCAGCTaGAGCAGCTGCCAATATCTG +
Preference number: 4 (lower is better)
Translates to: QRHHSPSFLWPLQKDSLKHISLS*SSCQYL
Trigger: CAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTG...CTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGG +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGDRGSV*SEEHRW
Trigger: CCATCGATGCTCTTCACTTCAGACGCTACCTCGATC...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATACACATCTCGCTCAGCTaGAGCAGCTGCCAATATCTG +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIHISLS*SSCQYL
Trigger: CAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTG...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp AAACTGATCGAGGTAGCGTCTGAAGTGAAGAGCATCGATGGCAACGATCTCAGTCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: KLIEVASEVKSIDGNDLSQVPVL*PEWSAV
Trigger: GACCGCTGACCATTCAGGGCAAAGGACAGGGACCTG...ACTGAGATCGTTGCCATCGATGCTCTTCACTTCAGACGCTACCTCGATCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR GCA 90 bp AAACTGATCGAGGTAGCGTCTGAAGTGAAGAGCATCGATGGCAACGATCTCAGTGGAGGTGGGAGGAGATaGTATTCGCTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KLIEVASEVKSIDGNDLSGGGRR*YSLGSS
Trigger: TGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCC...ACTGAGATCGTTGCCATCGATGCTCTTCACTTCAGACGCTACCTCGATCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGTCACTCCCATCTTCGTaGCTCCGGGACCAACGATAT +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRSLPSS*LRDQRY
Trigger: ATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGA...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAAGCCCCAGTTTCCTGTaGCCACTGCAGAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: PKAPQPQFPVATAERFSESPSFL*PLQKDS
Trigger: AGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCT...TTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp AAGCCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: KPCSARVSFSQAQTDRGSVLCPE*SAVSAQ
Trigger: CTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGAC...GCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp GGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: GLDSMVYEWIKLDVWSRGTGRLW*EVGGDA
Trigger: AGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGT...ACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAGTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: QRHHSPSFLWPLQKDSLKCRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...CTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAACTGAGTCCCCAAAGGTaGAATAAACCACATCTCGCT +
Preference number: 4 (lower is better)
Translates to: PKAPQPQFPVATAERFSELSPQR*NKPHLA
Trigger: AGCGAGATGTGGTTTATTTCACCTTTGGGGACTCAG...TTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp CATCACCCCCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATGTCTCTCATCAATTCTaGGTCCCCAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: HHPQRHHSPSFLWPLQKDVSHQF*VPKGEI
Trigger: TATTTCACCTTTGGGGACTCAGAATTGATGAGAGAC...ATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGGGGGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTCCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIPCPLP*MVSGLC
Trigger: GCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGG...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATCTCCTTCTCAGCGCCTaGCTTGGCCTCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNLLLSA*LGLPKC
Trigger: GCACTTTGGGAGGCCAAGGCAGGCGCTGAGAAGGAG...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402038.7
CDS-3UTR GCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTTCAGTGCAGCGCCGCTaGCAGTCGTCCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEISVQRR*QSSLSL
Trigger: GAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGA...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTTGGCAACGATCTCAGTaGAGCGCCGCTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIWQRSQ*SAAASR
Trigger: ACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCA...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGTGAAGAGCATCGATaGCAACGATCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRSEEHR*QRSQCS
Trigger: GCTGCACTGAGATCGTTGCCATCGATGCTCTTCACT...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAAGTGAAGAGCATCGATaGCAACGATCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGSEEHR*QRSQCS
Trigger: GCTGCACTGAGATCGTTGCCATCGATGCTCTTCACT...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGCCCCAGTTTCCTGTaGCCACTGCAGAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRSPSFL*PLQKDS
Trigger: AGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCT...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGCLVQG*NSFCIL
Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp CCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCAGCATAGCATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: PFHSHLRGSGTNDMSQHSIKLDV*SRGGTV
Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...GCTATGCTGAGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGTTTCAACTTGTTTCCTaGCATCGCTGGCATCTGCGG +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRFQLVS*HRWHLR
Trigger: CCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATATGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIICRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATACTGAGTCCCCAAAGGTaGAATAAACCACATCTCGCT +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIILSPQR*NKPHLA
Trigger: AGCGAGATGTGGTTTATTTCACCTTTGGGGACTCAG...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGVVLAG*KYLADR
Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGGAGGTGGGAGGAGATaGTATTCGCTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNGGGRR*YSLGSS
Trigger: TGAGGAGCCGAGCGAATAGCATCTCCTCCCACCTCC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGACTGGCATCTGCGGGCTaGAGAAGCAACTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRLASAG*RSNWYN
Trigger: ATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAG...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCTCTCAGCGCCTGCCTTaGCCTCCCAAAGTGCCGAGA +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTSQRLP*PPKVPR
Trigger: TCTCGGCACTTTGGGAGGCCAAGGCAGGCGCTGAGA...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402038.7
CDS-3UTR CCA 90 bp CCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PKAPQPQFPVATAERFSERSGIG*VQIFGR
Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...TTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614063.4
CDS-3UTR CCA 90 bp AAGCCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCAGTGAAGAGCATCGATaGCAACGATCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: KPCSARVSFSQAQTDRGSSEEHR*QRSQCS
Trigger: GCTGCACTGAGATCGTTGCCATCGATGCTCTTCACT...GCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGATTAAGGCTTTTAACCTaGCATCACCCCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGLRLLT*HHPQRH
Trigger: GTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAA...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRCLVQG*NSFCIL
Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGTGTCTGGTCCAGGGGTaGAACAGTTTCTGCATTCTT +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMCLVQG*NSFCIL
Trigger: AAGAATGCAGAAACTGTTCCACCCCTGGACCAGACA...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGTTTCCTGGCATCGCTaGCATCTGCGGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIVSWHR*HLRAAE
Trigger: TTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAAC...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGTTTCCTGGCATCGCTaGCATCTGCGGGCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNVSWHR*HLRAAE
Trigger: TTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAAC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTGTCTCTCATCAATTCTaGGTCCCCAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGVSHQF*VPKGEI
Trigger: TATTTCACCTTTGGGGACTCAGAATTGATGAGAGAC...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCAGAGACCCGACAGGCTaGGCACAACCTTCCATGGGA +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTRDPTG*AQPSMG
Trigger: TCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCT...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGAAGCATATTAAGAGTTaGGTGGAAGGCTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMKHIKS*VEGSQG
Trigger: TCCCTGTGAGCCTTCCACTCAACTCTTAATATGCTT...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATAGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIVVLAG*KYLADR
Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMRSGIG*VQIFGR
Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGIKLDV*SRGGTV
Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGGAGCACAACCTTCCATaGGATTTCACAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMEHNLP*DFTRDL
Trigger: CAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTC...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATAGGCTGCAGAAGCAACTaGTATAATATATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIGCRSN*YNIWAG
Trigger: TCCTGCCCATATATTATACCAGTTGCTTCTGCAGCC...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAACTATCCAAACTTTCTaGTTCCGCTGTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGTIQTF*FRCLDS
Trigger: GGAATCAAGACAGCGGAATCAGAAAGTTTGGATAGT...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGGATCGAGGTAGCGTCTaGAGTGAAGAGCATCGATGG +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLDRGSV*SEEHRW
Trigger: CCATCGATGCTCTTCACTTCAGACGCTACCTCGATC...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGTCTCTCATCAATTCTaGGTCCCCAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGVSHQF*VPKGEI
Trigger: TATTTCACCTTTGGGGACTCAGAATTGATGAGAGAC...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATATTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGTTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTCACATCTCGCTCAGCTaGAGCAGCTGCCAATATCTG +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIHISLS*SSCQYL
Trigger: CAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGTG...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCATGGTCAGCGGTCTCTaGACAGGACTCGACAGCATG +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTMVSGL*TGLDSM
Trigger: CATGCTGTCGAGTCCTGTGCAGAGACCGCTGACCAT...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp ACATCTCGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGAGTGAAGAGCATCGATaGCAACGATCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: TSRSAAAAANICIKAFNLSEEHR*QRSQCS
Trigger: GCTGCACTGAGATCGTTGCCATCGATGCTCTTCACT...CAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp GGACTCGACAGCATGGTATATGAATGGATAAAGCTTGATGTCTGGTCCAGGGGTTTAAGGCTTTTAACCTaGCATCACCCCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GLDSMVYEWIKLDVWSRGLRLLT*HHPQRH
Trigger: GTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAA...ACCCCTGGACCAGACATCAAGCTTTATCCATTCATATACCATGCTGTCGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp CCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCAGCATAGCAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PFHSHLRGSGTNDMSQHSSMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...GCTATGCTGAGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTVLCPE*SAVSAQ
Trigger: CTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGAC...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGTCTCTCATCAATTCTaGGTCCCCAAAGGTGAAATA +
Preference number: 4 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRVSHQF*VPKGEI
Trigger: TATTTCACCTTTGGGGACTCAGAATTGATGAGAGAC...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACACCCTGTCCTTTGCCCTaGATGGTCAGCGGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETPCPLP*MVSGLC
Trigger: GCAGAGACCGCTGACCATTCAGGGCAAAGGACAGGG...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGATTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 4 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp ACATCTCGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGATATCTAAGTCCACGTaGGTCAGGATGGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: TSRSAAAAANICIKAFNLISKST*VRMEGV
Trigger: AACTCCCTCCATCCTGACTCACGTGGACTTAGATAT...CAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCGAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614063.4
CDS-3UTR TCA 90 bp GAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAGATCTGATGCAAACTTTGGTTATATaGATATGCCTCAAGCACCAC +
Preference number: 4 (lower is better)
Translates to: ETRQAEHNLPWDFTRDLMQTLVI*ICLKHH
Trigger: GTGGTGCTTGAGGCATATTCATATAACCAAAGTTTG...CATCAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACATGGCAACGATCTCAGTaGAGCGCCGCTGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETWQRSQ*SAAASR
Trigger: ACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCA...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp CCTTGTTCAGCTCGCGTCTCATTTTCTCAGGCACAAACTGATCGAGGTAGCGTCATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 4 (lower is better)
Translates to: PCSARVSFSQAQTDRGSVMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...GACGCTACCTCGATCAGTTTGTGCCTGAGAAAATGAGACGCGAGCTGAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp CCAAAGGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTGAAAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: PKAPQPQFPVATAERFSESMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...TTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATCCACGTGAGTCAGGATaGAGGGAGTTTAGATGTACC +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNPRESG*REFRCT
Trigger: GGTACATCTAAACTCCCTCCATCCTGACTCACGTGG...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAAACTGGTATAATATATaGGCAGGAAGAAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGNWYNI*AGRKRP
Trigger: GGGTCTCTTTCTTCCTGCCCATATATTATACCAGTT...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATAATATTAAGAGTTGAGTaGAAGGCTCACAGGGAGATT +
Preference number: 4 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIILRVE*KAHREI
Trigger: AATCTCCCTGTGAGCCTTCCACTCAACTCTTAATAT...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLCRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp GCCAATATCTGTATTAAGGCTTTTAACCTGGCATCACCCCCAAAGGCACCACAGTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 4 (lower is better)
Translates to: ANICIKAFNLASPPKAPQFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...CTGTGGTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAATACAGATATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTATATCTAAGTCCACGTaGGTCAGGATGGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIISKST*VRMEGV
Trigger: AACTCCCTCCATCCTGACTCACGTGGACTTAGATAT...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp CAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACATTCAGTGCAGCGCCGCTaGCAGTCGTCCCTTTCACTC +
Preference number: 4 (lower is better)
Translates to: QFSNFGYMNMPQAPQKKHSVQRR*QSSLSL
Trigger: GAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGA...ATGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCCTGGCATCTGCGGGCTaGAGAAGCAACTGGTATAAT +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTLASAG*RSNWYN
Trigger: ATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAG...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATTTAAGGCTTTTAACCTaGCATCACCCCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNLRLLT*HHPQRH
Trigger: GTGCCTTTGGGGGTGATGCCAGGTTAAAAGCCTTAA...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGSMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACAACAGGACGTCTCTGGTaGGAGGTGGGAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETTGRLW*EVGGDA
Trigger: AGCATCTCCTCCCACCTCCCACCAGAGACGTCCTGT...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCTTTCAACTTGTTTCCTaGCATCGCTGGCATCTGCGG +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTFQLVS*HRWHLR
Trigger: CCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAATATTAAGAGTTGAGTaGAAGGCTCACAGGGAGATT +
Preference number: 4 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRILRVE*KAHREI
Trigger: AATCTCCCTGTGAGCCTTCCACTCAACTCTTAATAT...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAG +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTCRKIL*RNSRTE
Trigger: CTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCA...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp CGCTCAGCTGCAGCAGCTGCCAATATCTGTATTAAGGCTTTTAACCTGGCATCAAAGAGATTGCGTCCTTaGCTACAAATGTGGATTATG +
Preference number: 4 (lower is better)
Translates to: RSAAAAANICIKAFNLASKRLRP*LQMWIM
Trigger: CATAATCCACATTTGTAGTCAAGGACGCAATCTCTT...TGATGCCAGGTTAAAAGCCTTAATACAGATATTGGCAGCTGCTGCAGCTGAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR TCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGAAGCATATTAAGAGTTaGGTGGAAGGCTCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLKHIKS*VEGSQG
Trigger: TCCCTGTGAGCCTTCCACTCAACTCTTAATATGCTT...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGTGGTATTGGCTGGGTaGAAATATTTGGCAGACAGA +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNVVLAG*KYLADR
Trigger: TCTGTCTGCCAAATATTTGCACCCAGCCAATACCAC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp CAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACATCAGGTCCCTGTCCTTTaGCCTGAATGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: QFSNFGYMNMPQAPQKKHQVPVL*PEWSAV
Trigger: GACCGCTGACCATTCAGGGCAAAGGACAGGGACCTG...ATGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTAGGAGTGGTATTGGCTaGGTGCAAATATTTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIRSGIG*VQIFGR
Trigger: TCTGCCAAATATTTGCACCCAGCCAATACCACTCCT...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp AGGAAGAAAGAGACCCGACAGGCTGAGCACAACCTTCCATGGGATTTCACAAGAAGCATGGTATATGAATaGATAAAGCTTGATGTCTGG +
Preference number: 4 (lower is better)
Translates to: RKKETRQAEHNLPWDFTRSMVYE*IKLDVW
Trigger: CCAGACATCAAGCTTTATCCATTCATATACCATGCT...TCTTGTGAAATCCCATGGAAGGTTGTGCTCAGCCTGTCGGGTCTCTTTCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACAGTCCTTTGCCCTGAATaGTCAGCGGTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETVLCPE*SAVSAQ
Trigger: CTGTGCAGAGACCGCTGACCATTCAGGGCAAAGGAC...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGAGCACAACCTTCCATaGGATTTCACAAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIEHNLP*DFTRDL
Trigger: CAGATCTCTTGTGAAATCCCATGGAAGGTTGTGCTC...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGCCAGTTCTCAAACTTTaGTTATATGAATATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRPVLKL*LYEYAS
Trigger: TGAGGCATATTCATATAACCAAAGTTTGAGAACTGG...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATACTATCCAAACTTTCTaGTTCCGCTGTCTTGATTCC +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNTIQTF*FRCLDS
Trigger: GGAATCAAGACAGCGGAATCAGAAAGTTTGGATAGT...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTTTCATATATTACACCTaGCAGCTCAAACAGGACGTC +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIFIYYT*QLKQDV
Trigger: GACGTCCTGTTTGAGCTGTCAGGTGTAATATATGAA...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTTTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCATAAAGCTTGATGTCTaGTCCAGGGGTGGAACAGTT +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTIKLDV*SRGGTV
Trigger: AACTGTTCCACCCCTGGACCAGACATCAAGCTTTAT...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCGGCTGCAGAAGCAACTaGTATAATATATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTGCRSN*YNIWAG
Trigger: TCCTGCCCATATATTATACCAGTTGCTTCTGCAGCC...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGAAGAGATTGCGTCCTTaGCTACAAATGTGGATTATG +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLKRLRP*LQMWIM
Trigger: CATAATCCACATTTGTAGTCAAGGACGCAATCTCTT...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTAAGAGATTGCGTCCTTaGCTACAAATGTGGATTATG +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIKRLRP*LQMWIM
Trigger: CATAATCCACATTTGTAGTCAAGGACGCAATCTCTT...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp AACAAAACATATCTAAGTCCACGTGAGTCAGGATGGAGGGAGTTTAGATGTACCTTTAGATGTACCAACTaGCAACTGCACATGTGTGGA +
Preference number: 4 (lower is better)
Translates to: NKTYLSPRESGWREFRCTFRCTN*QLHMCG
Trigger: TCCACACATGTGCAGTTGTCAGTTGGTACATCTAAA...GGTACATCTAAACTCCCTCCATCCTGACTCACGTGGACTTAGATATGTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR TCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGCAAACTTTGGTTATATaGATATGCCTCAAGCACCAC +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLQTLVI*ICLKHH
Trigger: GTGGTGCTTGAGGCATATTCATATAACCAAAGTTTG...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR GCA 90 bp GATGGAGGGAGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTATGTGTGGAAGAGATTaGGTCCTTGACTACAAATGT +
Preference number: 4 (lower is better)
Translates to: DGGSLDVPTDNCTCVEEIMCGRD*VLDYKC
Trigger: ACATTTGTAGTCAAGGACGCAATCTCTTCCACACAT...AATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACTCCCTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACAAGCCCCAGTTTCCTGTaGCCACTGCAGAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETSPSFL*PLQKDS
Trigger: AGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCT...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATAACTGGTATAATATATaGGCAGGAAGAAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNNWYNI*AGRKRP
Trigger: GGGTCTCTTTCTTCCTGCCCATATATTATACCAGTT...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR TCA 90 bp CCAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACAATATCTAAGTCCACGTaGGTCAGGATGGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: PVLKLWLYEYASSTTKETISKST*VRMEGV
Trigger: AACTCCCTCCATCCTGACTCACGTGGACTTAGATAT...TGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR GCA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGTGTATTCACTGTACTaGTCAGTACCTGTGATAATT +
Preference number: 4 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNVYSLY*SVPVII
Trigger: AATTATCACAGGTACTGAGCAGTACAGTGAATACAC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CCA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGCCAGTTCTCAAACTTTaGTTATATGAATATGCCTCA +
Preference number: 4 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLPVLKL*LYEYAS
Trigger: TGAGGCATATTCATATAACCAAAGTTTGAGAACTGG...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATATTCTCAGCGCCTGCCTaGGCCTCCCAAAGTGCCGAG +
Preference number: 5 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIFSAPA*ASQSAE
Trigger: CTCGGCACTTTGGGAGGCCAAGGCAGGCGCTGAGAA...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402038.7
CDS TCA 90 bp GGCACCACAGCCCCAGTTTCCTGTGGCCACTGCAGAAAGATTCTCTaGAGAAACTCCAGGACGGAGAAATCCACAGTAAGCCTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: GTTAPVSCGHCRKIL*RNSRTEKSTVSLQD
Trigger: ATCCTGCAGGCTTACTGTGGATTTCTCCGTCCTGGAGTTTCTTCAGAGAATCTTTCTGCAGTGGCCACAGGAAACTGGGGCTGTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492350.2
CDS-3UTR CAA 90 bp CGATGGCAACGATCTCAGTGCAGCGCCGCTGCCAGTCGTCCCTTTCACTCCCATGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 5 (lower is better)
Translates to: RWQRSQCSAAASRPFHSHEEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...ATGGGAGTGAAAGGGACGACTGGCAGCGGCGCTGCACTGAGATCGTTGCCATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000610922.1
ENST00000614063.4
CDS-3UTR CAA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTTTCCTGGATTTCAACTaGTTTCCTGGCATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGFLDFN*FPGIAG
Trigger: GCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAA...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp CCCTTTCACTCCCATCTTCGTGGCTCCGGGACCAACGATATGTCTCAGCATAGCGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG +
Preference number: 5 (lower is better)
Translates to: PFHSHLRGSGTNDMSQHSVSGVV*AGCKYL
Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...GCTATGCTGAGACATATCGTTGGTCCCGGAGCCACGAAGATGGGAGTGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614063.4
CDS CCA 90 bp ATCAGCCTGATACCATCTGAATTAATCCTTTGTGGCAGGCCTTTGTaGACCACACTGGTGGTAAGGCTGCACACTCAAAGCTTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ISLIPSELILCGRPL*TTLVVRLHTQSLGL
Trigger: AAGCCCTAAGCTTTGAGTGTGCAGCCTTACCACCAGTGTGGTCCACAAAGGCCTGCCACAAAGGATTAATTCAGATGGTATCAGGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497481.1
CDS-3UTR CAA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTGTAATAGTCTTTTGTTaGAAAACAAGCGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGVIVFC*KTSEVA
Trigger: CGCCACCTCGCTTGTTTTCAAACAAAAGACTATTAC...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp CTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTATAATAGTAATAGTCTTTTGTTaGAAAACAAGCGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: LVSWHRWHLRAAEATGIIVIVFC*KTSEVA
Trigger: CGCCACCTCGCTTGTTTTCAAACAAAAGACTATTAC...TATTATACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp CATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGAGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 5 (lower is better)
Translates to: HILHLTAQTGRLWWEVGGEEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...TCCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CAA 90 bp AGTTTAGATGTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGTTCCTGGATTTCAACTaGTTTCCTGGCATCGCTGGC +
Preference number: 5 (lower is better)
Translates to: SLDVPTDNCTCVEEIASLFLDFN*FPGIAG
Trigger: GCCAGCGATGCCAGGAAACAAGTTGAAATCCAGGAA...CAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTACATCTAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp TTTCAACTTGTTTCCTGGCATCGCTGGCATCTGCGGGCTGCAGAAGCAACTGGTTTTAACCTAGGAGGTTaGCATTATGCAACACATATG +
Preference number: 5 (lower is better)
Translates to: FQLVSWHRWHLRAAEATGFNLGG*HYATHM
Trigger: CATATGTGTTGCATAATGCAAACCTCCTAGGTTAAA...ACCAGTTGCTTCTGCAGCCCGCAGATGCCAGCGATGCCAGGAAACAAGTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp TCATATATTACACCTGACAGCTCAAACAGGACGTCTCTGGTGGGAGGTGGGAGGTTTAACCTAGGAGGTTaGCATTATGCAACACATATG +
Preference number: 5 (lower is better)
Translates to: SYITPDSSNRTSLVGGGRFNLGG*HYATHM
Trigger: CATATGTGTTGCATAATGCAAACCTCCTAGGTTAAA...CCTCCCACCTCCCACCAGAGACGTCCTGTTTGAGCTGTCAGGTGTAATATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS-3UTR CAA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGTTTCAGGAGTGGTATaGGCTGGGTGCAAATATTTG +
Preference number: 5 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNVSGVV*AGCKYL
Trigger: CAAATATTTGCACCCAGCCAATACCACTCCTGAAAC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402038.7
ENST00000614063.4
ENST00000616448.2
CDS-3UTR CAA 90 bp GTACCAACTGACAACTGCACATGTGTGGAAGAGATTGCGTCCTTGACTACAAATGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 5 (lower is better)
Translates to: VPTDNCTCVEEIASLTTNEEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...ATTTGTAGTCAAGGACGCAATCTCTTCCACACATGTGCAGTTGTCAGTTGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402038.7
ENST00000610922.1
ENST00000614063.4
ENST00000616448.2
CDS TCA 90 bp ATTATCAAAGCCTGTGAGTGCCTAGACACTAACAGTGTTTCTGACTaGTGTACTAGGATCAGTGTCCATTATCAAGCTTATGTTCAATTT +
Preference number: 5 (lower is better)
Translates to: IIKACECLDTNSVSD*CTRISVHYQAYVQF
Trigger: AAATTGAACATAAGCTTGATAATGGACACTGATCCTAGTACATCAGTCAGAAACACTGTTAGTGTCTAGGCACTCACAGGCTTTGATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492350.2
CDS-3UTR CAA 90 bp CAGTTCTCAAACTTTGGTTATATGAATATGCCTCAAGCACCACAAAAGAAACATGAAGAGATTGCGTCCTaGACTACAAATGTGGATTAT +
Preference number: 5 (lower is better)
Translates to: QFSNFGYMNMPQAPQKKHEEIAS*TTNVDY
Trigger: ATAATCCACATTTGTAGTCAAGGACGCAATCTCTTC...ATGTTTCTTTTGTGGTGCTTGAGGCATATTCATATAACCAAAGTTTGAGAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402038.7
ENST00000616448.2
CDS CAA 90 bp ACTATCAGCCTGATACCATCTGAATTAATCCTTTGTGGCAGGCCTTaGTGGACCACACTGGTGGTAAGGCTGCACACTCAAAGCTTAGGG +
Preference number: 6 (lower is better)
Translates to: TISLIPSELILCGRP*WTTLVVRLHTQSLG
Trigger: CCCTAAGCTTTGAGTGTGCAGCCTTACCACCAGTGTGGTCCACAAAGGCCTGCCACAAAGGATTAATTCAGATGGTATCAGGCTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497481.1
CDS CCA 72 bp ATACCATCTGAATTAATCCTTTGTGGCAGGCCTTTGTaGACCACACTGGTGGTAAGGCTGCACACTCAAAGC +
Preference number: 6 (lower is better)
Translates to: IPSELILCGRPL*TTLVVRLHTQS
Trigger: GCTTTGAGTGTGCAGCCTTACCACCAGTGTGGTCCACAAAGGCCTGCCACAAAGGATTAATTCAGATGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497481.1
CDS TCA 72 bp GCCTGTGAGTGCCTAGACACTAACAGTGTTTCTGACTaGTGTACTAGGATCAGTGTCCATTATCAAGCTTAT +
Preference number: 6 (lower is better)
Translates to: ACECLDTNSVSD*CTRISVHYQAY
Trigger: ATAAGCTTGATAATGGACACTGATCCTAGTACATCAGTCAGAAACACTGTTAGTGTCTAGGCACTCACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492350.2
CDS GCA 72 bp TTTTTCCTTTCTCTATTTAGTGTCAAGGTTGAGACTTaGACGTTTCTTTATGGTCCCTTTCCTGGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: FFLSLFSVKVET*TFLYGPFPGRS
Trigger: TGACCTTCCAGGAAAGGGACCATAAAGAAACGTGCAAGTCTCAACCTTGACACTAAATAGAGAAAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497481.1