RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARD3B (Homo sapiens)

Ensembl gene IDs: ENSG00000116117

Ensembl transcript IDs: ENST00000349953.7, ENST00000351153.5, ENST00000358768.6, ENST00000406610.7, ENST00000415947.1, ENST00000462231.5, ENST00000465890.1, ENST00000471958.1, ENST00000488622.1, ENST00000489565.1, ENST00000494482.1, ENST00000613457.4, ENST00000614500.3, ENST00000622699.2

Found 1320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCA +
Preference number: 1 (lower is better)
Translates to: GSTSERVMLPGRDCL*TASLRGGCPRVCTS
Trigger: TGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp GAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGACTTGGCATTTCCCAGGGCACTGCCT +
Preference number: 1 (lower is better)
Translates to: EAMVSSSLSPSADGY*LALSLDLAFPRALP
Trigger: AGGCAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp GCGGCCAGTTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGT +
Preference number: 1 (lower is better)
Translates to: AASWAATSVSKASGL*RSAGFPLGLSILWS
Trigger: ACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAACTGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 90 bp GTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAGTCTGGACTTGGCATTTCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: VIRGHGQLLAVPECR*LLLGTESGLGISQG
Trigger: GCCCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp CTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGGCATTTCC +
Preference number: 1 (lower is better)
Translates to: LLVIRGHGQLLAVPE*RWLLLGTESGLGIS
Trigger: GGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp AAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: KRLAGYQQVGLALGH*FSSPAVECLVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR GCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGTGGTTCTTG +
Preference number: 1 (lower is better)
Translates to: LGGHFCLKSIWALPI*RVSTGALNLVEWFL
Trigger: CAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 90 bp CTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTT +
Preference number: 1 (lower is better)
Translates to: LKCGQLGGHFCLKSI*ALPICRVSTGALNL
Trigger: AAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 90 bp ACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: TTSSRIPTGTTSFRL*PPGCEALGWVSAGG
Trigger: CCCACCTGCTGATACCCAGCCAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR GCA 90 bp CTCCTTCAAGACACAGGATTCTCACCTGACACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGCTTAATCCAGAAGGAATGTTCTGGC +
Preference number: 1 (lower is better)
Translates to: LLQDTGFSPDTITPG*PSSGLGLIQKECSG
Trigger: GCCAGAACATTCCTTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTGTCTTGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 90 bp ACTCTTCCTGTAAAGGCCACTCCTTCAAGACACAGGATTCTCACCTaGCACCATCACCCCTGGCTGCCCCTCAAGTGGCCTAGGCTTAAT +
Preference number: 1 (lower is better)
Translates to: TLPVKATPSRHRILT*HHHPWLPLKWPRLN
Trigger: ATTAAGCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTGTCTTGAAGGAGTGGCCTTTACAGGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp TCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATaGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGG +
Preference number: 1 (lower is better)
Translates to: SLIHFHLIPAGHQRP*SAPRCPRVQMVTAW
Trigger: CCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp ACTCTCTCTCTCTCTCTCTCTCATTCACTTCCATCTAATACCTGCTaGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCA +
Preference number: 1 (lower is better)
Translates to: TLSLSLSHSLPSNTC*SSEAMVSSSLSPSA
Trigger: TGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAGAGAGAGAGAGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp CATACTCTCTCTCTCTCTCTCTCTCATTCACTTCCATCTAATACCTaGTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGT +
Preference number: 1 (lower is better)
Translates to: HTLSLSLSHSLPSNT*WSSEAMVSSSLSPS
Trigger: ACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAGAGAGAGAGAGAGAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp CTTTGTAGGGATACCTTAAGGCGACTCCTCTTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGTTGGCAGGAACTGGGAGTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: LCRDTLRRLLFLVSL*HRFQLSWQELGVLR
Trigger: TCTCAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAAGAGGAGTCGCCTTAAGGTATCCCTACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp TATGGCAAGGGTGAGAGTGCCACAACCCGATGGCATAATGGATTCTaGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCT +
Preference number: 1 (lower is better)
Translates to: YGKGESATTRWHNGF*GGCVSLPCGSLNSP
Trigger: AGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCAGAATCCATTATGCCATCGGGTTGTGGCACTCTCACCCTTGCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp CGACTCCTCTTTCTGGTCTCGCTGTGGCATCGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTGAGAAATACTTCTGTGGCTGTTTCT +
Preference number: 1 (lower is better)
Translates to: RLLFLVSLWHRFQLS*QELGVLRNTSVAVS
Trigger: AGAAACAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAAGAGGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp CTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGAGTGGTTCTTGTTCTTCAAACACAG +
Preference number: 1 (lower is better)
Translates to: LSQKHLGSADLQGFH*GSQSCGVVLVLQTQ
Trigger: CTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 90 bp GGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCAAACACAGCAATCAGCTTGTCTTTA +
Preference number: 1 (lower is better)
Translates to: GLCRSAGFPLGLSIL*SGSCSSNTAISLSL
Trigger: TAAAGACAAGCTGATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR TCA 90 bp AACCTGATCACCTTAGTCCTCGGAAGATATTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTCCCGGGACTAATACTGCATTTTACC +
Preference number: 1 (lower is better)
Translates to: NLITLVLGRYSFWKL*PAVHILPGLILHFT
Trigger: GGTAAAATGCAGTATTAGTCCCGGGAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGAATATCTTCCGAGGACTAAGGTGATCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp TCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTT +
Preference number: 1 (lower is better)
Translates to: SFHGLHDPAVRSAAK*MYVDWVWSSMCHSL
Trigger: AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp ACAACAGGTTTTGTTTTAGGTTCCAGTAGTAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCTGAAGGAGCCCAGTCAGGAGACAGG +
Preference number: 1 (lower is better)
Translates to: TTGFVLGSSSKQPYR*NRRTLSEGAQSGDR
Trigger: CCTGTCTCCTGACTGGGCTCCTTCAGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTTACTACTGGAACCTAAAACAAAACCTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp AGCATTTCAAATGTCAGTGCCTGGTTCAAACCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTGCTTGTGTTCTCATTTGGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: SISNVSAWFKPVLRF*CLPHLLLVFSFGPA
Trigger: AGCTGGCCCAAATGAGAACACAAGCAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGGCACTGACATTTGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 90 bp AATACTTCTGTGGCTGTTTCTGAGTCCAAATCCCTCCTGCCTAATTaGACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAG +
Preference number: 1 (lower is better)
Translates to: NTSVAVSESKSLLPN*TKTSLSVARRLRKQ
Trigger: CTGCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACTCAGAAACAGCCACAGAAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp TTGGGGTTTCAGCTTTTTAAAGCCATAACACTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCTGACCTGACTTTAGCTAATGAAATA +
Preference number: 1 (lower is better)
Translates to: LGFQLFKAITLSFAN*RPWPCPDLTLANEI
Trigger: TATTTCATTAGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATGGCTTTAAAAAGCTGAAACCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 90 bp CTGAATGCTGAGTTCTACACATCCAATCCTGGCACCACATTTTCGTaGTATTGGGAGCTTGAAAATGTACACCACTCACATGGTATGGTT +
Preference number: 1 (lower is better)
Translates to: LNAEFYTSNPGTTFS*YWELENVHHSHGMV
Trigger: AACCATACCATGTGAGTGGTGTACATTTTCAAGCTCCCAATATCACGAAAATGTGGTGCCAGGATTGGATGTGTAGAACTCAGCATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 90 bp GACAGTCGGTCTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTCAACACATATATATCTACAGATCTA +
Preference number: 1 (lower is better)
Translates to: DSRSQNPYYALKIFT*CHPVGVNTYISTDL
Trigger: TAGATCTGTAGATATATATGTGTTGACTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAGACCGACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 90 bp GGCTATCTGAGAGGATTATTCACAATTACAGCTCTTCAAAGCAACTaGGGATTTAGCAGGAAGATCCCACAGTCCTATATGGAAGGAGAA +
Preference number: 1 (lower is better)
Translates to: GYLRGLFTITALQSN*GFSRKIPQSYMEGE
Trigger: TTCTCCTTCCATATAGGACTGTGGGATCTTCCTGCTAAATCCTCAGTTGCTTTGAAGAGCTGTAATTGTGAATAATCCTCTCAGATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR GCA 90 bp AGTCGGTCTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTaGCATCCTGTGGGAGTCAACACATATATATCTACAGATCTAAGA +
Preference number: 1 (lower is better)
Translates to: SRSQNPYYALKIFTW*HPVGVNTYISTDLR
Trigger: TCTTAGATCTGTAGATATATATGTGTTGACTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAGACCGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 90 bp CATCAAACTCTCCAGAAAGCATTATTAATCTTTCATTCTCCATACTaGCAATCATATGTGTTCGAACACACACATACACACACACACACA +
Preference number: 1 (lower is better)
Translates to: HQTLQKALLIFHSPY*QSYVFEHTHTHTHT
Trigger: TGTGTGTGTGTGTGTATGTGTGTGTTCGAACACATATGATTGCCAGTATGGAGAATGAAAGATTAATAATGCTTTCTGGAGAGTTTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp GCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTGGCATTTCCCAGGGCACTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: AMVSSSLSPSADGYC*ALSLDLAFPRALPP
Trigger: AGGAGGCAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTGCTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: GVKRLAGYQQVGLALGHCLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...GCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAGACACCTTCCTTTCTaGACCGGGCTGGCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: LLAVPECRWLLLGTESGLRHLPF*TGLASV
Trigger: CACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGACACCTTCCTTTCTaGACCGGGCTGGCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRHLPF*TGLASV
Trigger: CACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCGCTTGTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: YLLEQPVSDSGHQGVKRLWALPI*RVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCA...CAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 2 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp CCATGCCTGGAATGTGGGAGGGAGGAAGGTGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATCACCTTAGTCCTCGGAAGATATTCC +
Preference number: 2 (lower is better)
Translates to: PCLECGREEGEGRGM*NPLNLITLVLGRYS
Trigger: GGAATATCTTCCGAGGACTAAGGTGATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTCACCTTCCTCCCTCCCACATTCCAGGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 2 (lower is better)
Translates to: LLAVPECRWLLLGTESGLGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGTTACTGCTTGGCACTaGGTCTGGACTTGGCATTTC +
Preference number: 2 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSVTAWH*VWTWHF
Trigger: GAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAAC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAGACACCTTCCTTTCTaGACCGGGCTGGCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWERHLPF*TGLASV
Trigger: CACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 2 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TACTTCAATCTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 2 (lower is better)
Translates to: YFNLPTNWLKCGQLGGHFCLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...GAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CAA 90 bp GCGACTCCTCTTTCTGGTCTCGCTGTGGCATCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCTGAGAAATACTTCTGTGGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: ATPLSGLAVASFPAK*AGTGSAEKYFCGCF
Trigger: GAAACAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAAGAGGAGTCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACACAGGATTCTCACCTaGCACCATCACCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKHRILT*HHHPWL
Trigger: CAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCACAGGATTCTCACCTaGCACCATCACCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEHRILT*HHHPWL
Trigger: CAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGGGCTATTAGTGTTCTaGGCTACAAGGAGACACCGG +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMGLLVF*ATRRHR
Trigger: CCGGTGTCTCCTTGTAGCTCAGAACACTAATAGCCC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAAAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAEKASGL*RSAGFP
Trigger: TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTT...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCAGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: AATSVSKASGLCRSAGFPGLSIL*SGSCSS
Trigger: TGAAGAACAAGAACCACTCCACAAGATTGAGAGCCC...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAACTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAELQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQATITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 2 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTA +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESWSSLP*ACVQEV
Trigger: TACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCAACCAGATATCTCCATaGCTGGAATGTGGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSNQISP*LECGRE
Trigger: CTCCCTCCCACATTCCAGGCATGGAGATATCTGGTT...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 2 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAGACACCTTCCTTTCTaGACCGGGCTGGCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQARHLPF*TGLASV
Trigger: CACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVLSFAN*RPWPCP
Trigger: AGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTT +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRSAAK*MYVDWV
Trigger: AACCCAATCAACATACATCCACTTGGCTGCAGATCT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCTTGGTGCCATCCTGTaGGAGTCAACACATATATAT +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALLGAIL*ESTHIY
Trigger: ATATATATGTGTTGACTCCCACAGGATGGCACCAAG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACACGTGAGCAGGGCCTaGGATCCTCAACCACTTCGA +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAHVSRA*DPQPLR
Trigger: TCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAATCAGGATCCACGGGTaGCAGTCGGTCTCAGAACCC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKIRIHG*QSVSEP
Trigger: GGGTTCTGAGACCGACTGTCACCCGTGGATCCTGAT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQALAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISTITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGCTTGTGTTCTCATTTaGGCCAGCTTGTATGTTTTA +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALACVLI*ASLYVL
Trigger: TAAAACATACAAGCTGGCCCAAATGAGAACACAAGC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCACTCTAAAGGTGCCTaGCTTAAGAGAGATGACAGA +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMHSKGA*LKRDDR
Trigger: TCTGTCATCTCTCTTAAGCCAGGCACCTTTAGAGTG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAGTGCCACAACCCGATaGCATAATGGATTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWESATTR*HNGFWG
Trigger: TCCCCAGAATCCATTATGCCATCGGGTTGTGGCACT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAACTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 2 (lower is better)
Translates to: LPTNWLKCGQLGGHFCLKLNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...TTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQASFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 2 (lower is better)
Translates to: LELLIVAWLDGASVCHKYWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAATGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 2 (lower is better)
Translates to: FFQAGSNGACVILQARKEWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGTCTTCCACATCTTTTaGTTGTGTTCTCATTTGGGC +
Preference number: 2 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMVFHIF*LCSHLG
Trigger: GCCCAAATGAGAACACAAGCAAAAGATGTGGAAGAC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGTACCTTCACATCACTaGCTGCCATTCAGGATTAGC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEVPSHH*LPFRIS
Trigger: GCTAATCCTGAATGGCAGCCAGTGATGTGAAGGTAC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGAGTCCTGTAACCTCTaGGTGGTAACAATTGAAGGG +
Preference number: 2 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPESCNL*VVTIEG
Trigger: CCCTTCAATTGTTACCACCCAGAGGTTACAGGACTC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCAATTGTTGCTTGGCTTaGTGGAGCCTCTGTCTGTCA +
Preference number: 2 (lower is better)
Translates to: NWELFPAPRHITDYSLVFNCCLA*WSLCLS
Trigger: TGACAGACAGAGGCTCCATCAAGCCAAGCAACAATT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 2 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCACTCTAAAGGTGCCTaGCTTAAGAGAGATGACAGA +
Preference number: 2 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLHSKGA*LKRDDR
Trigger: TCTGTCATCTCTCTTAAGCCAGGCACCTTTAGAGTG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTGGCTGCCCCTCAAGTaGCCTAGGCTTAATCCAGAA +
Preference number: 2 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRWLPLK*PRLNPE
Trigger: TTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATGGCTGCCCCTCAAGTaGCCTAGGCTTAATCCAGAA +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKWLPLK*PRLNPE
Trigger: TTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGTTTCTCTCCCTTGTaGAAGTCTCAATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWECFSPL*KSQFSC
Trigger: GCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp AAGCATTTCAAATGTCAGTGCCTGGTTCAAACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTTGCTTGTGTTCTCATTTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KHFKCQCLVQTSAQV*LSSTSFACVLIWAS
Trigger: GCTGGCCCAAATGAGAACACAAGCAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGGCACTGACATTTGAAATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGTTACTGCTTGGCACTaGGTCTGGACTTGGCATTTC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAVTAWH*VWTWHF
Trigger: GAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAAC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTG +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESPVLRF*CLPHLL
Trigger: CAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 2 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACCCAGCAGTCAGATCTaGAGCCAAGTGGATGTATGT +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKPSSQI*SQVDVC
Trigger: ACATACATCCACTTGGCTGCAGATCTGACTGCTGGG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TTTAAAACTGCAAAGTCCCACTTAACCTATGGGTACAGCACTTTGATCTTTCATATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 2 (lower is better)
Translates to: FKTAKSHLTYGYSTLIFHISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...ATGAAAGATCAAAGTGCTGTACCCATAGGTTAAGTGGGACTTTGCAGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CAA 90 bp ATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGTGGTTCTaGTTCTTCAAACACAGCAATCAGCTTGTCTTTATCTTCAACAAC +
Preference number: 2 (lower is better)
Translates to: ICRVSTGALNLVEWF*FFKHSNQLVFIFNN
Trigger: GTTGTTGAAGATAAAGACAAGCTGATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGGCTATTAGTGTTCTaGGCTACAAGGAGACACCGG +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGLLVF*ATRRHR
Trigger: CCGGTGTCTCCTTGTAGCTCAGAACACTAATAGCCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACTTCCATCTAATACCTaGTGGTCATCAGAGGCCATG +
Preference number: 2 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGELPSNT*WSSEAM
Trigger: CATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTG +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVPVLRF*CLPHLL
Trigger: CAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TTTAAAACTGCAAAGTCCCACTTAACCTATGGGTACAGCACTTTGATCTTTCATACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 2 (lower is better)
Translates to: FKTAKSHLTYGYSTLIFHTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...ATGAAAGATCAAAGTGCTGTACCCATAGGTTAAGTGGGACTTTGCAGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 2 (lower is better)
Translates to: NWELFPAPRHITDYSLVFSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp CACATCACTGGCTGCCATTCAGGATTAGCAACTATTTTATTGACTTaGTATGCAACACAAAACCCAGCTTTGGAGCAGTTTACCCTGAGC +
Preference number: 2 (lower is better)
Translates to: HITGCHSGLATILLT*YATQNPALEQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGTTGCATACAAAGTCAATAAAATAGTTGCTAATCCTGAATGGCAGCCAGTGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 2 (lower is better)
Translates to: LELLIVAWLDGASVCHKYRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTCTAAAACTAGCAGTTaGATCCTTCTTGGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESSKTSS*ILLGSR
Trigger: TCTGCTACCAAGAAGGATGCAACTGCTAGTTTTAGA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGATCTACTTAGAGGTTaGGGTTTCAGCTTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLDLLRG*GFSFLK
Trigger: CTTTAAAAAGCTGAAACCCCAACCTCTAAGTAGATC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 2 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATGTTTCTCTCCCTTGTaGAAGTCTCAATTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKCFSPL*KSQFSC
Trigger: GCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp GCAGATGGATTTAGCCTTAGCGCCTTTTCTCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAAGCATTATTAATCTTTCATTCTCCA +
Preference number: 2 (lower is better)
Translates to: ADGFSLSAFSPFPPL*HQTLQKALLIFHSP
Trigger: TGGAGAATGAAAGATTAATAATGCTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGGAGAAAAGGCGCTAAGGCTAAATCCATCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 2 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGTCTTCCACATCTTTTaGTTGTGTTCTCATTTGGGC +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKVFHIF*LCSHLG
Trigger: GCCCAAATGAGAACACAAGCAAAAGATGTGGAAGAC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 2 (lower is better)
Translates to: FFQAGSNGACVILQARKELHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGATCTACTTAGAGGTTaGGGTTTCAGCTTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: SCLIALRPVFLLLVDSESDLLRG*GFSFLK
Trigger: CTTTAAAAAGCTGAAACCCCAACCTCTAAGTAGATC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 2 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 2 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 2 (lower is better)
Translates to: LRTPTMLLRSLLGAILWESKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 90 bp TACCTTCACATCACTGGCTGCCATTCAGGATTAGCAACTATTTTATaGACTTTGTATGCAACACAAAACCCAGCTTTGGAGCAGTTTACC +
Preference number: 2 (lower is better)
Translates to: YLHITGCHSGLATIL*TLYATQNPALEQFT
Trigger: GGTAAACTGCTCCAAAGCTGGGTTTTGTGTTGCATACAAAGTCAATAAAATAGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: FFQAGSNGACVILQARKEPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGCTTGTGTTCTCATTTaGGCCAGCTTGTATGTTTTA +
Preference number: 2 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAACVLI*ASLYVL
Trigger: TAAAACATACAAGCTGGCCCAAATGAGAACACAAGC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGCTTGTGTTCTCATTTaGGCCAGCTTGTATGTTTTA +
Preference number: 2 (lower is better)
Translates to: LELLIVAWLDGASVCHKYACVLI*ASLYVL
Trigger: TAAAACATACAAGCTGGCCCAAATGAGAACACAAGC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAAT +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISQVDVC*LGLELN
Trigger: ATTGAGCTCCAAACCCAATCAACATACATCCACTTG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAGCTTATCAGTAACATaGAGAATTCCTAACACCAAG +
Preference number: 2 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSLSVT*RIPNTK
Trigger: CTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTATGTTGATTGGGTTTaGAGCTCAATGTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: VSILLHLKVFNGLSSFISYVDWV*SSMCHS
Trigger: AGAGTGGCACATTGAGCTCCAAACCCAATCAACATA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAAT +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVQVDVC*LGLELN
Trigger: ATTGAGCTCCAAACCCAATCAACATACATCCACTTG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 2 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 2 (lower is better)
Translates to: LELLIVAWLDGASVCHKYFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 2 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTCTAAAACTAGCAGTTaGATCCTTCTTGGTAGCAGA +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVSKTSS*ILLGSR
Trigger: TCTGCTACCAAGAAGGATGCAACTGCTAGTTTTAGA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 2 (lower is better)
Translates to: CISSTDLILLGNGIMARVSKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp GGGCTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGACCGCCAGTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: GLRLHLGAGNAA*QRLPLDRQSQR
Trigger: CCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp TCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGGGGATGTCCACGTGTC +
Preference number: 3 (lower is better)
Translates to: SERVMLPGRDCL*TASLRGGCPRV
Trigger: GACACGTGGACATCCCCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp AGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCC +
Preference number: 3 (lower is better)
Translates to: SAWLGISRWAWH*VTASPHQQWSA
Trigger: GGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 72 bp GGCCAGTTGGGCGGCCACTTCTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCT +
Preference number: 3 (lower is better)
Translates to: GQLGGHFCLKSI*ALPICRVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR TCA 72 bp CGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTaGGTCTGGACTTGGCATTTCCCAGGGCACTGCCTC +
Preference number: 3 (lower is better)
Translates to: RCPRVQMVTAWH*VWTWHFPGHCL
Trigger: GAGGCAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp AGGGAAACCGGTAGCTCCCCTGCACTCCACCTCACGTaGGCAGGGCCTGAGATCCTCAACCACTTCGAACAA +
Preference number: 3 (lower is better)
Translates to: RETGSSPALHLT*AGPEILNHFEQ
Trigger: TTGTTCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTGAGGTGGAGTGCAGGGGAGCTACCGGTTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp GTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGACTTGGCATTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSSSLSPSADGY*LALSLDLAFPR
Trigger: CCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp TGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCACTGGGGCTCTCAATC +
Preference number: 3 (lower is better)
Translates to: WAATSVSKASGL*RSAGFPLGLSI
Trigger: GATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR GCA 72 bp GCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTA +
Preference number: 3 (lower is better)
Translates to: AGYQQVGLALGH*FSSPAVECLVL
Trigger: TAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 72 bp GGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAGTCTGGACTTGGCATT +
Preference number: 3 (lower is better)
Translates to: GHGQLLAVPECR*LLLGTESGLGI
Trigger: AATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp ATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGCACTGAGTCTGGACTT +
Preference number: 3 (lower is better)
Translates to: IRGHGQLLAVPE*RWLLLGTESGL
Trigger: AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 3 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSEGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTGCCTTGTGGAGTGGTTCTaGTTCTTCAAACACAGCAAT +
Preference number: 3 (lower is better)
Translates to: GVKRLAGYQQVGLALGHCLVEWF*FFKHSN
Trigger: ATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAG...GCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR GCA 72 bp GACACAGGATTCTCACCTGACACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGCTTAATCCAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: DTGFSPDTITPG*PSSGLGLIQKE
Trigger: TTCCTTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp CACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATaGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTT +
Preference number: 3 (lower is better)
Translates to: HFHLIPAGHQRP*SAPRCPRVQMV
Trigger: AACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp AGGAGGTATTGCACACTCTGGTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCCTGTAAAGGCCACTCC +
Preference number: 3 (lower is better)
Translates to: RRYCTLWWQRCR*KHGHSSCKGHS
Trigger: GGAGTGGCCTTTACAGGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCACCAGAGTGTGCAATACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp CACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAG +
Preference number: 3 (lower is better)
Translates to: HFCLKSIWALPI*RVSTGALNLVE
Trigger: CTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 72 bp TCAATCTCCCCACCAATTGGCTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: SISPPIGLNAAS*AATSVSKASGL
Trigger: GAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 3 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMEGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLTVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CCA 72 bp CTCTCTCTCTCTCATTCACTTCCATCTAATACCTGCTaGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCC +
Preference number: 3 (lower is better)
Translates to: LSLSHSLPSNTC*SSEAMVSSSLS
Trigger: GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAGAGAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp GATACCTTAAGGCGACTCCTCTTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGTTGGCAGGAACTGGGA +
Preference number: 3 (lower is better)
Translates to: DTLRRLLFLVSL*HRFQLSWQELG
Trigger: TCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAAGAGGAGTCGCCTTAAGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp AAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGAGTGGTTCTTGTTCTT +
Preference number: 3 (lower is better)
Translates to: KHLGSADLQGFH*GSQSCGVVLVL
Trigger: AAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 3 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp ACCTTAGTCCTCGGAAGATATTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTCCCGGGACTAATACTG +
Preference number: 3 (lower is better)
Translates to: TLVLGRYSFWKL*PAVHILPGLIL
Trigger: CAGTATTAGTCCCGGGAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGAATATCTTCCGAGGACTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp ATGCAACACAAAACCCAGCTTTGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTATTGCACACTCTGGTG +
Preference number: 3 (lower is better)
Translates to: MQHKTQLWSSLP*ACVQEVLHTLV
Trigger: CACCAGAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGTTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp CCCAGCAGTCAGATCTGCAGCCAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAATGTGCCACTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PSSQICSQVDVC*LGLELNVPLSS
Trigger: GGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGCAGATCTGACTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp TCTCTCTCTCTCTCTCATTCACTTCCATCTAATACCTaGTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTG +
Preference number: 3 (lower is better)
Translates to: SLSLSHSLPSNT*WSSEAMVSSSL
Trigger: CAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAGAGAGAGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp GCAGTCAGATCTGCAGCCAAGTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGGG +
Preference number: 3 (lower is better)
Translates to: AVRSAAKWMYVD*VWSSMCHSLPG
Trigger: CCCTGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGCAGATCTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp GGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTTTGGAGCTCAATGTGC +
Preference number: 3 (lower is better)
Translates to: GLHDPAVRSAAK*MYVDWVWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: PGLLNTLKACSPKCWERVALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 3 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 3 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: WLDGASVCHKYNVSFFQATVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp TTTCTGGTCTCGCTGTGGCATCGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTGAGAAATACTTCTGTG +
Preference number: 3 (lower is better)
Translates to: FLVSLWHRFQLS*QELGVLRNTSV
Trigger: CACAGAAGTATTTCTCAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp CGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCAAACACAGCAATCAGC +
Preference number: 3 (lower is better)
Translates to: RSAGFPLGLSIL*SGSCSSNTAIS
Trigger: GCTGATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: LRTPTMLLRSLLGAILWETQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR GCA 72 bp GTGGCTGTTTCTGAGTCCAAATCCCTCCTGCCTAATTaGACTAAGACCAGTCTTTCTGTTGCTCGTAGACTC +
Preference number: 3 (lower is better)
Translates to: VAVSESKSLLPN*TKTSLSVARRL
Trigger: GAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACTCAGAAACAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 3 (lower is better)
Translates to: LGLMEPLSVTNIMLASFREGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 3 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCAAGGAGACACCGGATaGAGTTTTCCCAAGGCCATA +
Preference number: 3 (lower is better)
Translates to: SCLIALRPVFLLLVDSESQGDTG*SFPKAI
Trigger: TATGGCCTTGGGAAAACTCAATCCGGTGTCTCCTTG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 3 (lower is better)
Translates to: LELLIVAWLDGASVCHKYADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: PGLLNTLKACSPKCWERVTQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: PGLLNTLKACSPKCWERVPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: LRTPTMLLRSLLGAILWECLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 3 (lower is better)
Translates to: VSILLHLKVFNGLSSFISCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp TTTGTTTTAGGTTCCAGTAGTAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCTGAAGGAGCCCAGTCA +
Preference number: 3 (lower is better)
Translates to: FVLGSSSKQPYR*NRRTLSEGAQS
Trigger: TGACTGGGCTCCTTCAGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTTACTACTGGAACCTAAAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 3 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 3 (lower is better)
Translates to: LELLIVAWLDGASVCHKYTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 3 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 3 (lower is better)
Translates to: NWELFPAPRHITDYSLVFAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 3 (lower is better)
Translates to: VSILLHLKVFNGLSSFISTQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCAAACACAGCAATCAGCTaGTCTTTATCTTCAACAACA +
Preference number: 3 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPNTAIS*SLSSTT
Trigger: TGTTGTTGAAGATAAAGACAAGCTGATTGCTGTGTT...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR TCA 72 bp GAGTTCTACACATCCAATCCTGGCACCACATTTTCGTaGTATTGGGAGCTTGAAAATGTACACCACTCACAT +
Preference number: 3 (lower is better)
Translates to: EFYTSNPGTTFS*YWELENVHHSH
Trigger: ATGTGAGTGGTGTACATTTTCAAGCTCCCAATATCACGAAAATGTGGTGCCAGGATTGGATGTGTAGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKCLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CCA 72 bp TCTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTCAACACATATATATCT +
Preference number: 3 (lower is better)
Translates to: SQNPYYALKIFT*CHPVGVNTYIS
Trigger: AGATATATATGTGTTGACTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 3 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: CISSTDLILLGNGIMARVATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAA +
Preference number: 3 (lower is better)
Translates to: CISSTDLILLGNGIMARVPSGCM*IGFGAQ
Trigger: TTGAGCTCCAAACCCAATCAACATACATCCACTTGG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTCCATAATTAGTTGTTaGTGTGTTCCGTTGCCACTC +
Preference number: 3 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFSIISC*CVPLPL
Trigger: GAGTGGCAACGGAACACACAAACAACTAATTATGGA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 3 (lower is better)
Translates to: CISSTDLILLGNGIMARVCLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 3 (lower is better)
Translates to: CISSTDLILLGNGIMARVAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR TCA 72 bp AAAATGTTCCTGTTTCTGAGCTTGTATTTCATCCACTaGTTTGATATTGTTAGGAAACGGTATTATGGCAAG +
Preference number: 3 (lower is better)
Translates to: KMFLFLSLYFIH*FDIVRKRYYGK
Trigger: CTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACAAGCTCAGAAACAGGAACATTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTGCCGCTGCAGCGCCTGCTaGGTGAGCTCGCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: GVKRLAGYQQVGLALGHCRCSAC*VSSPTR
Trigger: GCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCG...GCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTCCCCGGAACACCCTaGGGCCCGGAGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: AATSVSKASGLCRSAGFPLPGTP*GPEARG
Trigger: GCCGCGAGCCTCCGGGCCTCAGGGTGTTCCGGGGAG...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCCCGCTCCTACTCCTaGCCGGCCCAGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSRSYS*PAQAAA
Trigger: AGCAGCCGCCTGGGCCGGGCAGGAGTAGGAGCGGGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTGGCCAGGCGGCAGGTaGCGGGAATCGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGGHFCLKSIWALPICRVWPGGR*RESGRG
Trigger: GCCCCTCCCCGATTCCCGCCACCTGCCGCCTGGCCA...AACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCTTCTTGGCGGGCAATaGCCAGCGATGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLLGGQ*PAMLSP
Trigger: GGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTGCCCACGATGCCCGTCCTaGCGAAGCACACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: GVKRLAGYQQVGLALGHCPRCPS*RSTRSL
Trigger: AAGTGACCGTGTGCTTCGGCAGGACGGGCATCGTGG...GCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGAGCCCCCGAGGTGCTaGTGGCAGATAGTCTACAGG +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQEPPRC*WQIVYR
Trigger: CCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGTAAGGGTACTGGTCTaGGCTGCCCCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCVRVLV*AAPTGP
Trigger: GGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTAC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCCTGGCCCTGGCCCTaGCCCTGGCGGCGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSWPWP*PWRRWQ
Trigger: CTGCCAACGCCGCCAGGGCCAGGGCCAGGGCCAGGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR TCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGGCCGAACAGGTGTCTaGCCCCGCGGGCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEGRTGV*PRGRSP
Trigger: GGGGCTGCGCCCGCGGGGTCAGACACCTGTTCGGCC...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCACAGGATTCTCACCTaGCACCATCACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQHRILT*HHHPWL
Trigger: CAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACATCAGGATCCACGGGTaGCAGTCGGTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDIRIHG*QSVSEP
Trigger: GGGTTCTGAGACCGACTGTCACCCGTGGATCCTGAT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGAGGATACCGGAGATCTaGCACCCTGAGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQRIPEI*HPELCG
Trigger: CCCACAGAGCTCAGGGTGGCAGATCTCCGGTATCCT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTGTGAAGCGCTTGGCTaGGTATCAGCAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQCEALG*VSAGGP
Trigger: AGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCAGCGCCTGCTGGGTaGGCTCGCCGACGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEAAPAG*ARRRAA
Trigger: AGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGC...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCCTGGGTTCGTCCGGTaGCATCTCTCCCATTTACCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQPGFVR*HLSHLP
Trigger: AGGTAAATGGGAGAGATGTCACCGGACGAACCCAGG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGAAGGTCATTCTTCCTaGCCTCGGCCACTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQEGHSS*PRPLQS
Trigger: AGACTGCAGTGGCCGAGGTCAGGAAGAATGACCTTC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCGCTGCAGCGCCTGCTaGGTGAGCTCGCCGACGCGC +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMRCSAC*VSSPTR
Trigger: GCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGCCACAAGCTCTTCCTaGGTTCGTCCGGTGACATCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQATSSS*VRPVTS
Trigger: AGATGTCACCGGACGAACCCAGGAAGAGCTTGTGGC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTGCAGGATCCTCCATTaGTCTCTCTGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDCRILH*SLWPPQ
Trigger: CTGAGGAGGCCAGAGAGACCAATGGAGGATCCTGCA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGGGAGCTGGCGGGGGTaGGTAGTGCTGAGGATACCG +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLGSWRG*VVLRIP
Trigger: CGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCFVLGS*RGWVVL
Trigger: CAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTG +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPGWPR*HSAIRL
Trigger: CAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCTCCCCGGAACACCCTaGGGCCCGGAGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELPGTP*GPEARG
Trigger: GCCGCGAGCCTCCGGGCCTCAGGGTGTTCCGGGGAG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGCCGAACAGGTGTCTaGCCCCGCGGGCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGRTGV*PRGRSP
Trigger: GGGGCTGCGCCCGCGGGGTCAGACACCTGTTCGGCC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGATTTCACGGCCTTCATaGCCCAGCAGTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQISRPS*PSSQIC
Trigger: GCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAAT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCATGCAGGGCACCACGATaGCCGTCCTGCCGAAGCACA +
Preference number: 4 (lower is better)
Translates to: AATSVSKASGLCRSAGFPCRAPR*PSCRST
Trigger: TGTGCTTCGGCAGGACGGGCATCGTGGTGCCCTGCA...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAAGGCAGGTGCCTTGGCTaGAGCCGCGCCCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAEGRCLG*SRAPLL
Trigger: GAGGAGTGGGGCGCGGCTGCAGCCAAGGCACCTGCC...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDCLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDVEEHT*RFHCLA
Trigger: CGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCAC...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDCGGST*RSTLGD
Trigger: ATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCGGCCCATCCGTCATTaGGCAGCAATAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQRPIRH*AAIDLS
Trigger: AGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACATACGGCTGCAGTCATaGGGTTCTTCTGCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDIRLQS*GSSAGN
Trigger: ATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTAT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCTGGCCACCAGGGTGTaGAGCGCTTGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSLATRV*SAWLGI
Trigger: GATACCCAGCCAAGCGCTTCACACCCTGGTGGCCAG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDSLHGH*PPKCFH
Trigger: ATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDGFQIN*FRLPGR
Trigger: CCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCC...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACGTTACTGCTTGGCACTaGGTCTGGACTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDVTAWH*VWTWHF
Trigger: GAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAAC...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCATCAGGATCCACGGGTaGCAGTCGGTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCIRIHG*QSVSEP
Trigger: GGGTTCTGAGACCGACTGTCACCCGTGGATCCTGAT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTGCAGGGCACCACGATaGCCGTCCTGCCGAAGCACA +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSCRAPR*PSCRST
Trigger: TGTGCTTCGGCAGGACGGGCATCGTGGTGCCCTGCA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCGAAAGGGTCCTTTGTaGTGGGGAGCTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRKGPL*WGAGGG
Trigger: ACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSTITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IWALPICRVSTGALNLVERWAWH*VTASPH
Trigger: GTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCT...CTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTGTGAAGCGCTTGGCTaGGTATCAGCAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCCEALG*VSAGGP
Trigger: AGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGTCAGCTGGAACCAGTaGATGGTATGGCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQVSWNQ*MVWLVD
Trigger: GTCAACAAGCCATACCATCCACTGGTTCCAGCTGAC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTGGCCAGGCGGCAGGTaGCGGGAATCGGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLWPGGR*RESGRG
Trigger: GCCCCTCCCCGATTCCCGCCACCTGCCGCCTGGCCA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTTGTTGCAGGGAAGCTaGTGCATCTGTTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQLLQGS*CICFRT
Trigger: AGTCCTGAAACAGATGCATCAGCTTCCCTGCAACAA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACTTCTTGGCGGGCAATaGCCAGCGATGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLLGGQ*PAMLSP
Trigger: GGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCAGCTCCGAATTCCCCTaGGGGGCAGACTCACAATTC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSSEFP*GADSQF
Trigger: GAATTGTGAGTCTGCCCCTCAGGGGAATTCGGAGCT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACAATTGTTGCTTGGCTTaGTGGAGCCTCTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDNCCLA*WSLCLS
Trigger: TGACAGACAGAGGCTCCATCAAGCCAAGCAACAATT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCACGATGCCCGTCCTaGCGAAGCACACGGTCACTT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSPRCPS*RSTRSL
Trigger: AAGTGACCGTGTGCTTCGGCAGGACGGGCATCGTGG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR GCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTCTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LGGHFCLKSIWALPICRVLALGH*FSSPAV
Trigger: CACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAG...AACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACGTTTGTCTTGTGGACTaGAAGTGCCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDVCLVD*KCQVDA
Trigger: TGCATCCACTTGGCACTTGCAGTCCACAAGACAAAC...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACACGGGGCCCTGGTCTaGCTGTTTCCTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLHGALV*LFPDRL
Trigger: CAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEGTGLG*PHGALV
Trigger: GACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCATCGCCGACGCGCAGCTaGCCCTCCTTGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPSPTRS*PSLQGT
Trigger: GGTGCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGA...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSRWAWH*VTASPH
Trigger: GTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCTGGGTATCAGCAGGTaGGCCTGGCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSLGISR*AWHWVT
Trigger: AGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTCTCAAAGCATGGCTTaGAAAATGCCCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDSQSMA*KMPHTL
Trigger: CAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGAGCTCGAGGGGGAGATaGAGATCTAAAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQSSRGR*RSKDIC
Trigger: GCAAATGTCTTTAGATCTCCATCTCCCCCTCGAGCT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGGGAGCTGGCGGGGGTaGGTAGTGCTGAGGATACCG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMGSWRG*VVLRIP
Trigger: CGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAAGGGTCCTTTGTGCTaGGGAGCTGGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRKGPLC*GAGGGG
Trigger: CCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGGCATTCTTTGGTGCTaGGGAGGGGAAGGCGGAACG +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALGILWC*GGEGGT
Trigger: CGTTCCGCCTTCCCCTCCCCAGCACCAAAGAATGCC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGACTCTCCAAGGAGCTaGACTTTTTCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQDSPRS*TFSNPE
Trigger: CTCTGGGTTTGAAAAAGTCCAGCTCCTTGGAGAGTC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
3UTR CAA 72 bp AGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTGGCATTTCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSSLSPSADGYC*ALSLDLAFPRA
Trigger: TGCCCTGGGAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAACTGGCCACCAGGGTGTaGAGCGCTTGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAELATRV*SAWLGI
Trigger: GATACCCAGCCAAGCGCTTCACACCCTGGTGGCCAG...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTGCTGCCAAATCCCATaGGAGGCGAGAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSCCQIP*EARVRE
Trigger: CTCCCTCACTCTCGCCTCTCATGGGATTTGGCAGCA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTGCTGCCAAATCCCATaGGAGGCGAGAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALCCQIP*EARVRE
Trigger: CTCCCTCACTCTCGCCTCTCATGGGATTTGGCAGCA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCACAGGATTCTCACCTaGCACCATCACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALHRILT*HHHPWL
Trigger: CAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGGGCTATTAGTGTTCTaGGCTACAAGGAGACACCGG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCGLLVF*ATRRHR
Trigger: CCGGTGTCTCCTTGTAGCTCAGAACACTAATAGCCC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGTCTTCAGGTACCGCTaGAGCGCCTGCTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEVFRYR*SACWVS
Trigger: GCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGAC...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCKASGL*RSAGFP
Trigger: TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGGHFCLKSIWALPICRVTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...AACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCTCCCGCTTGGACCTaGTGTTGTCTTCAATGCCTC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPPAWT*CCLQCL
Trigger: GAGGCATTGAAGACAACAGCAGGTCCAAGCGGGAGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLDAVSP*LVLLSM
Trigger: CATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTGTCTCCAGAGAGAGTaGACAGCAGTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCCLQRE*TAVRFS
Trigger: GGAGAACCTGACTGCTGTGCACTCTCTCTGGAGACA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSVEPPR*CWQIVY
Trigger: GTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTAC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFGTGLG*PHGALV
Trigger: GACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESGTGLG*PHGALV
Trigger: GACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGTCATGGGGTTCTTCTaGCGGGAATCCTGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSVMGFF*RESWVR
Trigger: CCGAACCCAGGATTCCCGGCAGAAGAACCCCATGAC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGAGTCCAAATCCCTCCTaGCTAATTGCACTAAGACCA +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQSPNPS*LIALRP
Trigger: TGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: IWALPICRVSTGALNLVETSFRL*PPGCEA
Trigger: CGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGT...CTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTACATGTATTCCCAATaGGCCTCCTTCCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDYMYSQ*ASFPRN
Trigger: ATTTCTGGGGAAGGAGGCCCATTGGGAATACATGTA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCAGTCCCGATTTTCCATaGACAGGAGGCGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSPDFP*TGGGTL
Trigger: CAAAGTGCCGCCTCCTGTCCATGGAAAATCGGGACT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDSRMWC*RRWNFT
Trigger: AGTGAAGTTCCACCTTCTCCAACACCACATTCTGCT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACAACCTTGCTTTCATCTaGCACAAGGTCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDNLAFI*HKVHAL
Trigger: AAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMFVLGS*RGWVVL
Trigger: CAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCAAGGGTCCTTTGTGCTaGGGAGCTGGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSKGPLC*GAGGGG
Trigger: CCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTT...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGTAAGGGTACTGGTCTaGGCTGCCCCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKVRVLV*AAPTGP
Trigger: GGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTAC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTTTCCACTGGGGCTCTCAATCTTGTGGAGTGGTTCTTGTTCTTCAAACACAGCCGGTCACTTTCATCCTaGCCCCCGGCGACCACGCCG +
Preference number: 4 (lower is better)
Translates to: VSTGALNLVEWFLFFKHSRSLSS*PPATTP
Trigger: CGGCGTGGTCGCCGGGGGCCAGGATGAAAGTGACCG...GCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSLSFAN*RPWPCP
Trigger: AGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGCAGCGCCTGCTGGGTaGGCTCGCCGACGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKAAPAG*ARRRAA
Trigger: AGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACATACATTCATTTTCGTaGAATAGTCCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDIHSFS*NSPSRL
Trigger: CAAGCGGGAGGGACTATTTCACGAAAATGAATGTAT...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCATGAGAGGCGAGAGTaGGGGAGAGGATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSHERRE*GRGWFS
Trigger: GGAAAACCATCCTCTCCCTCACTCTCGCCTCTCATG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACCTGGGTTCGTCCGGTaGCATCTCTCCCATTTACCT +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLPGFVR*HLSHLP
Trigger: AGGTAAATGGGAGAGATGTCACCGGACGAACCCAGG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCTTCTTGGCGGGCAATaGCCAGCGATGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMLLGGQ*PAMLSP
Trigger: GGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSLHGH*PPKCFH
Trigger: ATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCCPANE*TLLSSG
Trigger: GCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAAGCTCCGAATTCCCCTaGGGGGCAGACTCACAATTC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLSSEFP*GADSQF
Trigger: GAATTGTGAGTCTGCCCCTCAGGGGAATTCGGAGCT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTTTTCCCTTAGCTCCTaGTGTTTTGCTCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDFSLSS*CFAPIL
Trigger: AAGGATTGGAGCAAAACATCAGGAGCTAAGGGAAAA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGATCCATATCATACACTaGTCCAATTGCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQIHIIH*SNCTSS
Trigger: GCTACTGGTGCAATTGGATCAGTGTATGATATGGAT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCGGGCACTGCCTCCTGTaGGACCTCCCCAGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFGHCLL*DLPSRP
Trigger: GGGCCTACTGGGGAGGTCTCACAGGAGGCAGTGCCC...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTATTTCACGGCCTTCATaGCCCAGCAGTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLISRPS*PSSQIC
Trigger: GCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAAT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGGCCTGGCACTGGGTCACTGCCTTCAATCTGAATGCTaGGTTCTACACATCCAATCC +
Preference number: 4 (lower is better)
Translates to: GVKRLAGYQQVGLALGHCLQSEC*VLHIQS
Trigger: GGATTGGATGTGTAGAACTCAGCATTCAGATTGAAG...GCAGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACG +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESYRCSA*WVSSPT
Trigger: CGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRWALPI*RVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMWALPI*RVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCCCCAGCAGTCAGATCTaGAGCCAAGTGGATGTATGT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCPSSQI*SQVDVC
Trigger: ACATACATCCACTTGGCTGCAGATCTGACTGCTGGG...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCGCTTGTGTGAAGCGCTTGGCTaGGTATCAGCAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: YLLEQPVSDSGHQGVKRLCEALG*VSAGGP
Trigger: AGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACA...CAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTTAACTGCAATCAGCTaGTCATTCATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQLTAIS*SFIRRR
Trigger: TCGTCTGCGAATGAATGACCAGCTGATTGCAGTTAA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTGGTGTTGGAGAAGGTaGAACTTCACTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLWCWRR*NFTLGP
Trigger: TGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAACGGCCACTGTCAGCTaGAACCAGTGGATGGTATGG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLTATVS*NQWMVW
Trigger: CCATACCATCCACTGGTTCCAGCTGACAGTGGCCGT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCTGCGGGTCCTCCCCTaGGTAAGGATGCGTACTGCC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSLRVLP*VRMRTA
Trigger: GGCAGTACGCATCCTTACCCAGGGGAGGACCCGCAG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGGGAGCTGGCGGGGGTaGGTAGTGCTGAGGATACCG +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLGSWRG*VVLRIP
Trigger: CGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTGTTTCCTGATAGGCTaGCATTCTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCCFLIG*HSLVLG
Trigger: CCCCAGCACCAAAGAATGCCAGCCTATCAGGAAACA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGTAAGGGTACTGGTCTaGGCTGCCCCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFVRVLV*AAPTGP
Trigger: GGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTAC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGCACGGGGCCAGAGTTaGGAGGAAACTTTTGCGCCG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRARGQS*EETFAP
Trigger: CGGCGCAAAAGTTTCCTCCCAACTCTGGCCCCGTGC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEPGWPR*HSAIRL
Trigger: CAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTGGCTGCCCCTCAAGTaGCCTAGGCTTAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLWLPLK*PRLNPE
Trigger: TTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCTTGGTGCCATCCTGTaGGAGTCAACACATATATAT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLGAIL*ESTHIY
Trigger: ATATATATGTGTTGACTCCCACAGGATGGCACCAAG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGGCGACTCCTCTTTCTaGTCTCGCTGTGGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSGDSSF*SRCGIV
Trigger: AACGATGCCACAGCGAGACCAGAAAGAGGAGTCGCC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGGGGGATCTCAAAGGTaGGCTGCTCGCTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRGGSQR*AARLSP
Trigger: TGGAGACAAGCGAGCAGCTCACCTTTGAGATCCCCC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLGFQIN*FRLPGR
Trigger: CCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACGACTATTTAAGGACATaGGGGAGAAAAGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDDYLRT*GRKEFH
Trigger: GTGAAACTCTTTTCTCCCTCATGTCCTTAAATAGTC...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCCTGTCTTCCAAGTTCTaGGTGGAATCTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCLSSKF*VESGTT
Trigger: GGTTGTTCCAGATTCCACGCAGAACTTGGAAGACAG...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGGCAATGACCAGCGATaGTGTCTCCCCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMGNDQR*CLPLLG
Trigger: ACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAAATGCCCCACACTCTaGAGGATCCTCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLKCPTL*RILHWS
Trigger: AGACCAATGGAGGATCCTGCAGAGTGTGGGGCATTT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTAATTGATTCAGGCTaGCTGGCCGGTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCLIDSG*LAGVTD
Trigger: ATCTGTGACACCGGCCAGGCAGCCTGAATCAATTAA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCGAAAGGGTCCTTTGTaGTGGGGAGCTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWERKGPL*WGAGGG
Trigger: ACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCACGGGGCCCTGGTCTaGCTGTTTCCTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSHGALV*LFPDRL
Trigger: CAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTCTAAAACTAGCAGTTaGATCCTTCTTGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQSKTSS*ILLGSR
Trigger: TCTGCTACCAAGAAGGATGCAACTGCTAGTTTTAGA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTCTAAAACTAGCAGTTaGATCCTTCTTGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDSKTSS*ILLGSR
Trigger: TCTGCTACCAAGAAGGATGCAACTGCTAGTTTTAGA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPTITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCCAGCAGTCAGATCTaGAGCCAAGTGGATGTATGT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPSSQI*SQVDVC
Trigger: ACATACATCCACTTGGCTGCAGATCTGACTGCTGGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAATGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPTNWLKCGQLGGHFCLKCLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...TTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAATTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LPTNWLKCGQLGGHFCLKLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...TTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCAATCTCCCCACCAATTaGCTTAAATGCGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCNLPTN*LKCGQL
Trigger: CAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAAATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAEISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCTGGGTATCAGCAGGTaGGCCTGGCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSLGISR*AWHWVT
Trigger: AGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCCAGGAGGCGGCACTTTaGTTTTCAAAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCQEAAL*FSKRHH
Trigger: ATGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTG...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCTCAAAGCATGGCTTaGAAAATGCCCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSQSMA*KMPHTL
Trigger: CAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCCGAGGGTAACCAAATaGTCCAGCTCGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMPRVTK*SSSRGR
Trigger: TCTCCCCCTCGAGCTGGACCATTTGGTTACCCTCGG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCTGCGGGTCCTCCCCTaGGTAAGGATGCGTACTGCC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELRVLP*VRMRTA
Trigger: GGCAGTACGCATCCTTACCCAGGGGAGGACCCGCAG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEFVLGS*RGWVVL
Trigger: CAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEAPTGP*SACFLI
Trigger: TATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGTAAGGGTACTGGTCTaGGCTGCCCCCACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVVRVLV*AAPTGP
Trigger: GGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTAC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAATACGGCTGCAGTCATaGGGTTCTTCTGCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLIRLQS*GSSAGN
Trigger: ATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTAT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCACAGAAGCAAGGATTTTaGAGCCAGAACACCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AATSVSKASGLCRSAGFPQKQGF*SQNTWV
Trigger: CACCCAGGTGTTCTGGCTCCAAAATCCTTGCTTCTG...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTGGCCACCAGGGTGTaGAGCGCTTGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLATRV*SAWLGI
Trigger: GATACCCAGCCAAGCGCTTCACACCCTGGTGGCCAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCCTGCTTGGTGCTCCTaGGCATGGCCACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSPAWCS*AWPQAL
Trigger: AAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGCGGCCGGGGCCTGTaGAAGGGAAGGTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWECGRGL*KGRSFF
Trigger: GAAGAATGACCTTCCCTTTCACAGGCCCCGGCCGCA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGTTACTGCTTGGCACTaGGTCTGGACTTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALVTAWH*VWTWHF
Trigger: GAAATGCCAAGTCCAGACTCAGTGCCAAGCAGTAAC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAGGAACTGGGAGTGCTaGGAAATACTTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSRNWEC*EILLWL
Trigger: CAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCTGTCTTCCAAGTTCTaGGTGGAATCTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLLSSKF*VESGTT
Trigger: GGTTGTTCCAGATTCCACGCAGAACTTGGAAGACAG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCCTCCCGCTTGGACCTaGTGTTGTCTTCAATGCCTC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRPPAWT*CCLQCL
Trigger: GAGGCATTGAAGACAACAGCAGGTCCAAGCGGGAGG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCATCTCAAAGGTGAGCTaGTCGCTTGTCTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSISKVS*SLVSRE
Trigger: CTCTCTGGAGACAAGCGAGCAGCTCACCTTTGAGAT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCAAGTGCCAAGTGGATaGAGGATACTATTATCATTT +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDQVPSG*RILLSF
Trigger: AAATGATAATAGTATCCTGCATCCACTTGGCACTTG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGTTTGTCTTGTGGACTaGAAGTGCCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLVCLVD*KCQVDA
Trigger: TGCATCCACTTGGCACTTGCAGTCCACAAGACAAAC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGAGCCCCCGAGGTGCTaGTGGCAGATAGTCTACAGG +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLEPPRC*WQIVYR
Trigger: CCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSVEPPR*CWQIVY
Trigger: GTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTAC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCGAAAGGGTCCTTTGTaGTGGGGAGCTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESRKGPL*WGAGGG
Trigger: ACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCAGTCCAAATCCCTCCTaGCTAATTGCACTAAGACCA +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSPNPS*LIALRP
Trigger: TGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACT...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKRWAWH*VTASPH
Trigger: GTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACTGGGTATCAGCAGGTaGGCCTGGCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPLGISR*AWHWVT
Trigger: AGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAG...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATTTTCCTCCCAGCCTTaGTACTCGGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLFSSQP*YSGTLV
Trigger: AACAAGAGTCCCCGAGTACCAAGGCTGGGAGGAAAA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGCCACAAGCTCTTCCTaGGTTCGTCCGGTGACATCT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRATSSS*VRPVTS
Trigger: AGATGTCACCGGACGAACCCAGGAAGAGCTTGTGGC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAGAAAATGTCCTTCTTaGCGGGCAATGACCAGCGAT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLRKCPS*RAMTSD
Trigger: ATCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGACGGCCACTGTCAGCTaGAACCAGTGGATGGTATGG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMTATVS*NQWMVW
Trigger: CCATACCATCCACTGGTTCCAGCTGACAGTGGCCGT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTCTTTCCGCAACTTCTaGATACGGTCAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLSFRNF*IRSVLP
Trigger: TGGAAGCACTGACCGTATCCAGAAGTTGCGGAAAGA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTGCGGGTCCTCCCCTaGGTAAGGATGCGTACTGCC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLRVLP*VRMRTA
Trigger: GGCAGTACGCATCCTTACCCAGGGGAGGACCCGCAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCCCCCGAGGTGCTGCTaGCAGATAGTCTACAGGATC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSPPRCC*QIVYRI
Trigger: GATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGGCATTCTTTGGTGCTaGGGAGGGGAAGGCGGAACG +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLGILWC*GGEGGT
Trigger: CGTTCCGCCTTCCCCTCCCCAGCACCAAAGAATGCC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESAPTGP*SACFLI
Trigger: TATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCGGTCACTTTCATCCTaGCCCCCGGCGACCACGCCG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYRSLSS*PPATTP
Trigger: CGGCGTGGTCGCCGGGGGCCAGGATGAAAGTGACCG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGTGCCACAACCCGATaGCATAATGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALSATTR*HNGFWG
Trigger: TCCCCAGAATCCATTATGCCATCGGGTTGTGGCACT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 72 bp TTCAATCTCCCCACCAATTGGCTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FNLPTNWLKCGQ*GGHFCLKSIWA
Trigger: AGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACTTCAATGCCTCGGATaGAGAGTCCTAGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLQCLG*RVLESF
Trigger: GAAGGATTCTAGGACTCTTCATCCGAGGCATTGAAG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCATGAGAGGCGAGAGTaGGGGAGAGGATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSHERRE*GRGWFS
Trigger: GGAAAACCATCCTCTCCCTCACTCTCGCCTCTCATG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCTTCTTGGCGGGCAATaGCCAGCGATGCTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLLGGQ*PAMLSP
Trigger: GGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTGGAAAATATACTGCTaGATCCACCCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALWKIYC*IHPRAV
Trigger: CACAGCTCTGGGGTGGATTCAGCAGTATATTTTCCA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTGCGGCCGGGGCCTGTaGAAGGGAAGGTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFCGRGL*KGRSFF
Trigger: GAAGAATGACCTTCCCTTTCACAGGCCCCGGCCGCA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACACGTGAGCAGGGCCTaGGATCCTCAACCACTTCGA +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKHVSRA*DPQPLR
Trigger: TCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCACGTGAGCAGGGCCTaGGATCCTCAACCACTTCGA +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEHVSRA*DPQPLR
Trigger: TCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAAATTGTTGCTTGGCTTaGTGGAGCCTCTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLNCCLA*WSLCLS
Trigger: TGACAGACAGAGGCTCCATCAAGCCAAGCAACAATT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTATCTCTCGACCCTCCTaGAATGCTACAATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALISRPS*NATMFL
Trigger: GAGGAACATTGTAGCATTTCAGGAGGGTCGAGAGAT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCCAGAACACCTGGGTaGAATTCCTTGCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEARTPG*NSLLCH
Trigger: GTGGCAAAGCAAGGAATTTCACCCAGGTGTTCTGGC...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGTCTTCAGGTACCGCTaGAGCGCCTGCTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVVFRYR*SACWVS
Trigger: GCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGAC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFWALPI*RVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRKASGL*RSAGFP
Trigger: TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCACCAGCAGTGGAGTaGCTAGTTTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSPAVE*LVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKLALGH*FSSPAV
Trigger: CACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTACTTGGAGATTTCATTaGCTGGCGGAAGACATCTTG +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLTWRFH*LAEDIL
Trigger: CAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGCAATGACCAGCGATaGTGTCTCCCCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGNDQR*CLPLLG
Trigger: ACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAGACATTTGCTGATGTaGATGGTTCCCGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLRHLLM*MVPESG
Trigger: ACCACTTTCGGGAACCATGCACATCAGCAAATGTCT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCGAGCCCCCGAGGTGCTaGTGGCAGATAGTCTACAGG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFEPPRC*WQIVYR
Trigger: CCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTC...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTAC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKVEPPR*CWQIVY
Trigger: GTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTAC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAAGGATACCGGAGATCTaGCACCCTGAGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPRIPEI*HPELCG
Trigger: CCCACAGAGCTCAGGGTGGCAGATCTCCGGTATCCT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCACGGGGCCCTGGTCTaGCTGTTTCCTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFHGALV*LFPDRL
Trigger: CAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVTITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLLHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LGGHFCLKSIWALPICRVGLSIL*SGSCSS
Trigger: TGAAGAACAAGAACCACTCCACAAGATTGAGAGCCC...AACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLGLSIL*SGSCSS
Trigger: TGAAGAACAAGAACCACTCCACAAGATTGAGAGCCC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMCLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFRWAWH*VTASPH
Trigger: GTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCT...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCTGTTCACGGTTTTGTaGAGGAAGCACGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMLFTVL*RKHVEE
Trigger: CTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTAACTGCAATCAGCTaGTCATTCATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCLTAIS*SFIRRR
Trigger: TCGTCTGCGAATGAATGACCAGCTGATTGCAGTTAA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCTTTCTGGAGACAGTaGATGGCCATCCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSFWRQ*MAIPRV
Trigger: TACCCTCGGGATGGCCATCCACTGTCTCCAGAAAGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCTTTCCGCAACTTCTaGATACGGTCAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSFRNF*IRSVLP
Trigger: TGGAAGCACTGACCGTATCCAGAAGTTGCGGAAAGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCCCCGAGGTGCTGCTaGCAGATAGTCTACAGGATC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLPPRCC*QIVYRI
Trigger: GATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAAGGGTCCTTTGTGCTaGGGAGCTGGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYKGPLC*GAGGGG
Trigger: CCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEPGWPR*HSAIRL
Trigger: CAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAGACACCTTCCTTTCTaGACCGGGCTGGCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESRHLPF*TGLASV
Trigger: CACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCGCCAATTGGAGGCCTTaGCCCTGCCCTGACCTGACT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFANWRP*PCPDLT
Trigger: AGTCAGGTCAGGGCAGGGCCAAGGCCTCCAATTGGC...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTGGCTGCCCCTCAAGTaGCCTAGGCTTAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMWLPLK*PRLNPE
Trigger: TTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQSKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRRFQLS*QELGVL
Trigger: CAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSFLVSL*HRFQLS
Trigger: ACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALDYRFL*DLLSLV
Trigger: GACTAAAGACAGCAAATCTCACAGGAACCGATAGTC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLDYRFL*DLLSLV
Trigger: GACTAAAGACAGCAAATCTCACAGGAACCGATAGTC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACCTGGGTTCGTCCGGTaGCATCTCTCCCATTTACCT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPPGFVR*HLSHLP
Trigger: AGGTAAATGGGAGAGATGTCACCGGACGAACCCAGG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRCPANE*TLLSSG
Trigger: GCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGATGGTATGGCTTGTTaGCCTTGGCATAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMDGMAC*PWHRDP
Trigger: AGGGTCTCTATGCCAAGGTCAACAAGCCATACCATC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGAAGGTCATTCTTCCTaGCCTCGGCCACTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKEGHSS*PRPLQS
Trigger: AGACTGCAGTGGCCGAGGTCAGGAAGAATGACCTTC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCACAGGATTCTCACCTaGCACCATCACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFHRILT*HHHPWL
Trigger: CAGCCAGGGGTGATGGTGTCAGGTGAGAATCCTGTG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTGGCAACGCTGCAGGTaGAAACATGGGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLWQRCR*KHGHSS
Trigger: GGAAGAGTGCCCATGTTTTCACCTGCAGCGTTGCCA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGACTATTTAAGGACATaGGGGAGAAAAGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCDYLRT*GRKEFH
Trigger: GTGAAACTCTTTTCTCCCTCATGTCCTTAAATAGTC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCGCTTGTCACCAGCAGTGGAGTaGCTAGTTTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YLLEQPVSDSGHQGVKRLSPAVE*LVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGA...CAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLALGH*FSSPAV
Trigger: CACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFDAVSP*LVLLSM
Trigger: CATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGGCAATGACCAGCGATaGTGTCTCCCCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFGNDQR*CLPLLG
Trigger: ACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGCATGGCTTGGAAAATaGCCCACACTCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSAWLGK*PTLCRI
Trigger: GATCCTGCAGAGTGTGGGGCATTTTCCAAGCCATGC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTTCAGAGTACCTTTCTaGTCAGCCTTTCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALFRVPF*SAFPPL
Trigger: TAAGGGTGGAAAGGCTGAGCAGAAAGGTACTCTGAA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGGTAAGGATGCGTACTaGCTCTCCATCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRGKDAY*LSIPSK
Trigger: CTTTGAAGGGATGGAGAGGCAGTACGCATCCTTACC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESVEPPR*CWQIVY
Trigger: GTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTAC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFGTGLG*PHGALV
Trigger: GACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMTQLYG*SHGVLL
Trigger: CAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTGGAGGCCTTGGCCCTaGCCTGACCTGACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFWRPWP*PDLTLA
Trigger: AGCTAAAGTCAGGTCAGGGCAGGGCCAAGGCCTCCA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAACCATCACCCCTGGCTaGCCCTCAAGTGGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGETITPG*PSSGLG
Trigger: GCCTAGGCCACTTGAGGGGCAGCCAGGGGTGATGGT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCCCTCCTGCCTAATTaGACTAAGACCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSLLPN*TKTSLS
Trigger: AGAAAGACTGGTCTTAGTGCAATTAGGCAGGAGGGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTCGCCGACGCGCAGCTaGCCCTCCTTGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVSPTRS*PSLQGT
Trigger: GGTGCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAGGTGGGCCTGGCACTaGGTCACTGCTTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVRWAWH*VTASPH
Trigger: GTGAGGAGAAGCAGTGACCCAGTGCCAGGCCCACCT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLTSFRL*PPGCEA
Trigger: CGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCTTCCAAGTTCTGCGTaGAATCTGGAACAACCAGTT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSLPSSA*NLEQPV
Trigger: AACTGGTTGTTCCAGATTCCACGCAGAACTTGGAAG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATACATGTATTCCCAATaGGCCTCCTTCCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLYMYSQ*ASFPRN
Trigger: ATTTCTGGGGAAGGAGGCCCATTGGGAATACATGTA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAACCTTGCTTTCATCTaGCACAAGGTCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSNLAFI*HKVHAL
Trigger: AAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGAAAGTGGTTCACTCTaGCATAATTGGGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLESGSL*HNWGPF
Trigger: AAATGGACCCCAATTATGCCAGAGTGAACCACTTTC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTGCGGGTCCTCCCCTaGGTAAGGATGCGTACTGCC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLRVLP*VRMRTA
Trigger: GGCAGTACGCATCCTTACCCAGGGGAGGACCCGCAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGGGAGCTGGCGGGGGTaGGTAGTGCTGAGGATACCG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEGSWRG*VVLRIP
Trigger: CGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTTTCCTGATAGGCTaGCATTCTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRCFLIG*HSLVLG
Trigger: CCCCAGCACCAAAGAATGCCAGCCTATCAGGAAACA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEPGWPR*HSAIRL
Trigger: CAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLSFAN*RPWPCP
Trigger: AGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLSFAN*RPWPCP
Trigger: AGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCACTCTAAAGGTGCCTaGCTTAAGAGAGATGACAGA +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALHSKGA*LKRDDR
Trigger: TCTGTCATCTCTCTTAAGCCAGGCACCTTTAGAGTG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACACTCTAAAGGTGCCTaGCTTAAGAGAGATGACAGA +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLHSKGA*LKRDDR
Trigger: TCTGTCATCTCTCTTAAGCCAGGCACCTTTAGAGTG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTATGTTGATTGGGTTTaGAGCTCAATGTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLYVDWV*SSMCHS
Trigger: AGAGTGGCACATTGAGCTCCAAACCCAATCAACATA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALLKIFT*CHPVGV
Trigger: GACTCCCACAGGATGGCACCAAGTAAAGATCTTAAG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTGGGCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTGTCCCACTTAACCTATaGGTACAGCACTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: LGGHFCLKSIWALPICRVVPLNL*VQHFDL
Trigger: AAGATCAAAGTGCTGTACCCATAGGTTAAGTGGGAC...AACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp ATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGACCACTCACATGGTATaGTTTTGCAAAGCATTGGGT +
Preference number: 4 (lower is better)
Translates to: IWALPICRVSTGALNLVETTHMV*FCKALG
Trigger: ACCCAATGCTTTGCAAAACCATACCATGTGAGTGGT...CTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp ATCTGGGCTCTGCCGATCTGCAGGGTTTCCACTGGGGCTCTCAATCTTGTGGAGCTACACATCCAATCCTaGCACCACATTTTCGTGATA +
Preference number: 4 (lower is better)
Translates to: IWALPICRVSTGALNLVELHIQS*HHIFVI
Trigger: TATCACGAAAATGTGGTGCCAGGATTGGATGTGTAG...CTCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTATGCTGCCAAATCCCATaGGAGGCGAGAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVCCQIP*EARVRE
Trigger: CTCCCTCACTCTCGCCTCTCATGGGATTTGGCAGCA...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACCTGCTTGGTGCTCCTaGGCATGGCCACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVPAWCS*AWPQAL
Trigger: AAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGGGGGATCTCAAAGGTaGGCTGCTCGCTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVGGSQR*AARLSP
Trigger: TGGAGACAAGCGAGCAGCTCACCTTTGAGATCCCCC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSSLHGH*PPKCFH
Trigger: ATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCTGAAGTTGATGTGCTaGTCTGGAAAATATACTGCT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLLKLMC*SGKYTA
Trigger: AGCAGTATATTTTCCAGATCAGCACATCAACTTCAG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGCTCCTTGGCCAGAGTaGGAGCTCTTATCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEAPWPE*ELLSDR
Trigger: TCTGTCTGATAAGAGCTCTCACTCTGGCCAAGGAGC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAATCCATATCATACACTaGTCCAATTGCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLIHIIH*SNCTSS
Trigger: GCTACTGGTGCAATTGGATCAGTGTATGATATGGAT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCATCCATATCATACACTaGTCCAATTGCACCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSIHIIH*SNCTSS
Trigger: GCTACTGGTGCAATTGGATCAGTGTATGATATGGAT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGAAGGTCATTCTTCCTaGCCTCGGCCACTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESEGHSS*PRPLQS
Trigger: AGACTGCAGTGGCCGAGGTCAGGAAGAATGACCTTC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCACGTGAGCAGGGCCTaGGATCCTCAACCACTTCGA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVHVSRA*DPQPLR
Trigger: TCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFWSSLP*ACVQEV
Trigger: TACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALQVDVC*LGLELN
Trigger: ATTGAGCTCCAAACCCAATCAACATACATCCACTTG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTATTTCACGGCCTTCATaGCCCAGCAGTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLISRPS*PSSQIC
Trigger: GCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAAT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATTCTGTGGCTGTTTCTaGGTCCAAATCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPFCGCF*VQIPPA
Trigger: GGCAGGAGGGATTTGGACTCAGAAACAGCCACAGAA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTTCTGTGGCTGTTTCTaGGTCCAAATCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEFCGCF*VQIPPA
Trigger: GGCAGGAGGGATTTGGACTCAGAAACAGCCACAGAA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAAAGTCAGGCTGTGTGTaGTTCTGTGACTATTTAAGG +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLKSGCV*FCDYLR
Trigger: CCTTAAATAGTCACAGAATCACACACAGCCTGACTT...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCAGTCATTAGCCAAAATTaGATTCTCAGGCTATCTGAG +
Preference number: 4 (lower is better)
Translates to: AATSVSKASGLCRSAGFPVISQN*ILRLSE
Trigger: CTCAGATAGCCTGAGAATTCAATTTTGGCTAATGAC...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVLALGH*FSSPAV
Trigger: CACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATGTCTCCAGAGAGAGTaGACAGCAGTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKCLQRE*TAVRFS
Trigger: GGAGAACCTGACTGCTGTGCACTCTCTCTGGAGACA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAGATTCCCCATTAACTaGAATCAGCTGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLRFPIN*NQLVIH
Trigger: ATGAATGACCAGCTGATTGCAGTTAATGGGGAATCT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTTAATTGATTCAGGCTaGCTGGCCGGTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRLIDSG*LAGVTD
Trigger: ATCTGTGACACCGGCCAGGCAGCCTGAATCAATTAA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACGAAAGGGTCCTTTGTaGTGGGGAGCTGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKERKGPL*WGAGGG
Trigger: ACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCTTCCATCTAATACCTaGTGGTCATCAGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMLPSNT*WSSEAM
Trigger: CATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGTCTTCCACATCTTTTaGTTGTGTTCTCATTTGGGC +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLVFHIF*LCSHLG
Trigger: GCCCAAATGAGAACACAAGCAAAAGATGTGGAAGAC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTTTCCACTGGGGCTCTCAATCTTGTGGAGTGGTTCTTGTTCTTCAAACACAGCCTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VSTGALNLVEWFLFFKHSLQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...GCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACTGGGTATCAGCAGGTaGGCCTGGCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGELGISR*AWHWVT
Trigger: AGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACTGGGTATCAGCAGGTaGGCCTGGCACTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQALGISR*AWHWVT
Trigger: AGTGACCCAGTGCCAGGCCCACCTGCTGATACCCAG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTATGTGAAGCGCTTGGCTaGGTATCAGCAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVCEALG*VSAGGP
Trigger: AGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACA...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFTSFRL*PPGCEA
Trigger: CGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKVEEHT*RFHCLA
Trigger: CGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCAC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWECGGST*RSTLGD
Trigger: ATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCTGTTCACGGTTTTGTaGAGGAAGCACGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELFTVL*RKHVEE
Trigger: CTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAGTCCCGATTTTCCATaGACAGGAGGCGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKSPDFP*TGGGTL
Trigger: CAAAGTGCCGCCTCCTGTCCATGGAAAATCGGGACT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAGAAAATGTCCTTCTTaGCGGGCAATGACCAGCGAT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMRKCPS*RAMTSD
Trigger: ATCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATTAACTGCAATCAGCTaGTCATTCATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLTAIS*SFIRRR
Trigger: TCGTCTGCGAATGAATGACCAGCTGATTGCAGTTAA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTGTTTCCATAGCTTCGTaGTTGGACTTTCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALVSIAS*LDFPKR
Trigger: TCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAAC...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATGGTGTTGGAGAAGGTaGAACTTCACTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKWCWRR*NFTLGP
Trigger: TGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAAGGGTCCTTTGTGCTaGGGAGCTGGCGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISKGPLC*GAGGGG
Trigger: CCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGGCATTCTTTGGTGCTaGGGAGGGGAAGGCGGAACG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRGILWC*GGEGGT
Trigger: CGTTCCGCCTTCCCCTCCCCAGCACCAAAGAATGCC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEAPTGP*SACFLI
Trigger: TATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAGGAATGTTCTGGCTTaGCTATGTTTAGTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: LLAVPECRWLLLGTESGLRNVLA*LCLVVY
Trigger: GTAGACTACTAAACATAGCCAAGCCAGAACATTCCT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGAGTCCTGTAACCTCTaGGTGGTAACAATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMESCNL*VVTIEG
Trigger: CCCTTCAATTGTTACCACCCAGAGGTTACAGGACTC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTATGTTGATTGGGTTTaGAGCTCAATGTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALYVDWV*SSMCHS
Trigger: AGAGTGGCACATTGAGCTCCAAACCCAATCAACATA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWERFQLS*QELGVL
Trigger: CAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCATCCCACAGTCCTATATaGAAGGAGAATATCATCTCT +
Preference number: 4 (lower is better)
Translates to: AATSVSKASGLCRSAGFPSHSPI*KENIIS
Trigger: AGAGATGATATTCTCCTTCCATATAGGACTGTGGGA...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CAA 72 bp ACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: TQQSDLQPSGCM*IGFGAQCATLF
Trigger: GAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGCAGATCTGACTGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 72 bp CTTTCTGGTCTCGCTGTGGCATCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCTGAGAAATACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LSGLAVASFPAK*AGTGSAEKYFC
Trigger: ACAGAAGTATTTCTCAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCTTCAATGCCTCGGATaGAGAGTCCTAGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSLQCLG*RVLESF
Trigger: GAAGGATTCTAGGACTCTTCATCCGAGGCATTGAAG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCCTGGGTTCGTCCGGTaGCATCTCTCCCATTTACCT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVPGFVR*HLSHLP
Trigger: AGGTAAATGGGAGAGATGTCACCGGACGAACCCAGG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPCPANE*TLLSSG
Trigger: GCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTATGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVWSSLP*ACVQEV
Trigger: TACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCA...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGTATTATGGCAAGGGTaGGAGTGCCACAACCCGATG +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESVLWQG*ECHNPM
Trigger: CATCGGGTTGTGGCACTCTCACCCTTGCCATAATAC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCGTATTATGGCAAGGGTaGGAGTGCCACAACCCGATG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFVLWQG*ECHNPM
Trigger: CATCGGGTTGTGGCACTCTCACCCTTGCCATAATAC...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATATCAGGATCCACGGGTaGCAGTCGGTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYIRIHG*QSVSEP
Trigger: GGGTTCTGAGACCGACTGTCACCCGTGGATCCTGAT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TACTTCAATCTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCGTGATATTGGGAGCTTaGAAATGTACACCACTCACA +
Preference number: 4 (lower is better)
Translates to: YFNLPTNWLKCGQLGGHFVILGA*KCTPLT
Trigger: TGTGAGTGGTGTACATTTTCAAGCTCCCAATATCAC...GAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATTGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTGGCACTGGGTCACTaGTTCTCCTCACCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLALGH*FSSPAV
Trigger: CACTGCTGGTGAGGAGAAGCAGTGACCCAGTGCCAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCACTTGGAGATTTCATTaGCTGGCGGAAGACATCTTG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRTWRFH*LAEDIL
Trigger: CAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGGCAATGACCAGCGATaGTGTCTCCCCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEGNDQR*CLPLLG
Trigger: ACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTGTCTCCAGAGAGAGTaGACAGCAGTCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFCLQRE*TAVRFS
Trigger: GGAGAACCTGACTGCTGTGCACTCTCTCTGGAGACA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGATTCCCCATTAACTaGAATCAGCTGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRFPIN*NQLVIH
Trigger: ATGAATGACCAGCTGATTGCAGTTAATGGGGAATCT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGTAAGGATGCGTACTaGCTCTCCATCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGKDAY*LSIPSK
Trigger: CTTTGAAGGGATGGAGAGGCAGTACGCATCCTTACC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACACGGGGCCCTGGTCTaGCTGTTTCCTGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEHGALV*LFPDRL
Trigger: CAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGTCATGGGGTTCTTCTaGCGGGAATCCTGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAVMGFF*RESWVR
Trigger: CCGAACCCAGGATTCCCGGCAGAAGAACCCCATGAC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWETQLYG*SHGVLL
Trigger: CAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAACCAGATATCTCCATaGCTGGAATGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWENQISP*LECGRE
Trigger: CTCCCTCCCACATTCCAGGCATGGAGATATCTGGTT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACCCAGCAGTCAGATCTaGAGCCAAGTGGATGTATGT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKPSSQI*SQVDVC
Trigger: ACATACATCCACTTGGCTGCAGATCTGACTGCTGGG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAGTCCAAATCCCTCCTaGCTAATTGCACTAAGACCA +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSPNPS*LIALRP
Trigger: TGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCCTCCACCCCCATATaGCAAAATATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSSTPI*QNMISH
Trigger: ATGTGAAATCATATTTTGGCATATGGGGGTGGAGGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGTTCTGCGTGGAATCTaGAACAACCAGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMVLRGI*NNQFQT
Trigger: AGTCTGAAACTGGTTGTTCCAGATTCCACGCAGAAC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFCGGST*RSTLGD
Trigger: ATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCAGGAGGCGGCACTTTaGTTTTCAAAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSQEAAL*FSKRHH
Trigger: ATGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACTCCATTGGTCTCTCTaGCCTCCTCAGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLHWSL*PPQNHQ
Trigger: TTGGTGATTCTGAGGAGGCCAGAGAGACCAATGGAG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCTCAAAGCATGGCTTaGAAAATGCCCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSSQSMA*KMPHTL
Trigger: CAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCGGCCCATCCGTCATTaGGCAGCAATAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESRPIRH*AAIDLS
Trigger: AGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTGGTGTTGGAGAAGGTaGAACTTCACTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFWCWRR*NFTLGP
Trigger: TGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSRMWC*RRWNFT
Trigger: AGTGAAGTTCCACCTTCTCCAACACCACATTCTGCT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACCCCCGAGGTGCTGCTaGCAGATAGTCTACAGGATC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKPPRCC*QIVYRI
Trigger: GATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISFVLGS*RGWVVL
Trigger: CAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGCAGAGACTGCCTCTaGACCGCCAGTCTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGRDCL*TASLRG
Trigger: CCCTCTGAGACTGGCGGTCCAGAGGCAGTCTCTGCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGCTTGTGTTCTCATTTaGGCCAGCTTGTATGTTTTA +
Preference number: 4 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLACVLI*ASLYVL
Trigger: TAAAACATACAAGCTGGCCCAAATGAGAACACAAGC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGGAATGTTCTGGCTTaGCTATGTTTAGTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRNVLA*LCLVVY
Trigger: GTAGACTACTAAACATAGCCAAGCCAGAACATTCCT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGAGTCCTGTAACCTCTaGGTGGTAACAATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSESCNL*VVTIEG
Trigger: CCCTTCAATTGTTACCACCCAGAGGTTACAGGACTC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTGTTTCTCTCCCTTGTaGAAGTCTCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMCFSPL*KSQFSC
Trigger: GCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTTTCTCTCCCTTGTaGAAGTCTCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRCFSPL*KSQFSC
Trigger: GCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRLKIFT*CHPVGV
Trigger: GACTCCCACAGGATGGCACCAAGTAAAGATCTTAAG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTAGAAAACGAATGCAGTaGTTACAGGTTTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALRKRMQ*LQVWGN
Trigger: ATTTCCCCAAACCTGTAACCACTGCATTCGTTTTCT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAGAAAACGAATGCAGTaGTTACAGGTTTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSRKRMQ*LQVWGN
Trigger: ATTTCCCCAAACCTGTAACCACTGCATTCGTTTTCT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFRFQLS*QELGVL
Trigger: CAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMKQPYR*NRRTLS
Trigger: AGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAACAGCAGGATACCTACTaGAACAACCAGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAEQQDTY*NNQFQT
Trigger: AGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTG...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTTGTTGCAGGGAAGCTaGTGCATCTGTTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLLLQGS*CICFRT
Trigger: AGTCCTGAAACAGATGCATCAGCTTCCCTGCAACAA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTTGTTGCAGGGAAGCTaGTGCATCTGTTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELLQGS*CICFRT
Trigger: AGTCCTGAAACAGATGCATCAGCTTCCCTGCAACAA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACCTGCTTGGTGCTCCTaGGCATGGCCACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEPAWCS*AWPQAL
Trigger: AAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGGGGGATCTCAAAGGTaGGCTGCTCGCTTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEGGSQR*AARLSP
Trigger: TGGAGACAAGCGAGCAGCTCACCTTTGAGATCCCCC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATGGAAAATATACTGCTaGATCCACCCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKWKIYC*IHPRAV
Trigger: CACAGCTCTGGGGTGGATTCAGCAGTATATTTTCCA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESCPANE*TLLSSG
Trigger: GCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRFLSSQ*VNLAFI
Trigger: GATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGAGCTCCGAATTCCCCTaGGGGGCAGACTCACAATTC +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRSSEFP*GADSQF
Trigger: GAATTGTGAGTCTGCCCCTCAGGGGAATTCGGAGCT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAGCTCCGAATTCCCCTaGGGGGCAGACTCACAATTC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSSEFP*GADSQF
Trigger: GAATTGTGAGTCTGCCCCTCAGGGGAATTCGGAGCT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCGATGGTATGGCTTGTTaGCCTTGGCATAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFDGMAC*PWHRDP
Trigger: AGGGTCTCTATGCCAAGGTCAACAAGCCATACCATC...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTGCGGCCGGGGCCTGTaGAAGGGAAGGTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFCGRGL*KGRSFF
Trigger: GAAGAATGACCTTCCCTTTCACAGGCCCCGGCCGCA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR TCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTCCTTCTGGAAGCTCTaGCCAGCTGTGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSFWKL*PAVHIL
Trigger: GAGGATGTGCACAGCTGGTCAGAGCTTCCAGAAGGA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACACGTGAGCAGGGCCTaGGATCCTCAACCACTTCGA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEHVSRA*DPQPLR
Trigger: TCGAAGTGGTTGAGGATCTCAGGCCCTGCTCACGTG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEWSSLP*ACVQEV
Trigger: TACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTGGAGCAGTTTACCCTaGGCCTGTGTGCAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYWSSLP*ACVQEV
Trigger: TACCTCCTGCACACAGGCTCAGGGTAAACTGCTCCA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGTATTATGGCAAGGGTaGGAGTGCCACAACCCGATG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVVLWQG*ECHNPM
Trigger: CATCGGGTTGTGGCACTCTCACCCTTGCCATAATAC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGGCACCACATTTTCGTaGTATTGGGAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEGTTFS*YWELEN
Trigger: ATTTTCAAGCTCCCAATATCACGAAAATGTGGTGCC...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTGGGCTCTGCCGATCTaGAGGGTTTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFWALPI*RVSTGA
Trigger: AGCCCCAGTGGAAACCCTGCAGATCGGCAGAGCCCA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVKASGL*RSAGFP
Trigger: TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCTGTCTTCCAAGTTCTaGGTGGAATCTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLLSSKF*VESGTT
Trigger: GGTTGTTCCAGATTCCACGCAGAACTTGGAAGACAG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACCTCCCGCTTGGACCTaGTGTTGTCTTCAATGCCTC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAPPAWT*CCLQCL
Trigger: GAGGCATTGAAGACAACAGCAGGTCCAAGCGGGAGG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGTTTGTCTTGTGGACTaGAAGTGCCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLVCLVD*KCQVDA
Trigger: TGCATCCACTTGGCACTTGCAGTCCACAAGACAAAC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTATACTCAGATGGCCTTaGTCTTCCTTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLILRWP*SSFVVF
Trigger: GAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTAT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAAAAGCGGAGGTTGTGTaGATTCCCATCTGGACCCCT +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVKAEVV*IPIWTP
Trigger: AGGGGTCCAGATGGGAATGCACACAACCTCCGCTTT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAAAGCGGAGGTTGTGTaGATTCCCATCTGGACCCCT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVKAEVV*IPIWTP
Trigger: AGGGGTCCAGATGGGAATGCACACAACCTCCGCTTT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGAGCCCCCGAGGTGCTaGTGGCAGATAGTCTACAGG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFEPPRC*WQIVYR
Trigger: CCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCAGTGCAGATGGTTACTaGTTGGCACTGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFSADGY*LALSLD
Trigger: GTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACT...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGTCTTCCACATCTTTTaGTTGTGTTCTCATTTGGGC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRVFHIF*LCSHLG
Trigger: GCCCAAATGAGAACACAAGCAAAAGATGTGGAAGAC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCCAAAGAAAACGAATaGAGTGGTTACAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSKENE*SGYRFG
Trigger: CCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAGCGCTTGCTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: YLLEQPVSDSGHQGVKRLLNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...CAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTAATCTCCCCACCAATTaGCTTAAATGCGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLNLPTN*LKCGQL
Trigger: CAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCAAATCTCCCCACCAATTaGCTTAAATGCGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPNLPTN*LKCGQL
Trigger: CAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATT...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCTGTTCACGGTTTTGTaGAGGAAGCACGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVLFTVL*RKHVEE
Trigger: CTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACTGTTCACGGTTTTGTaGAGGAAGCACGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVLFTVL*RKHVEE
Trigger: CTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAGTCCCGATTTTCCATaGACAGGAGGCGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSPDFP*TGGGTL
Trigger: CAAAGTGCCGCCTCCTGTCCATGGAAAATCGGGACT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTTTTCCTCCCAGCCTTaGTACTCGGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESFSSQP*YSGTLV
Trigger: AACAAGAGTCCCCGAGTACCAAGGCTGGGAGGAAAA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGCCACAAGCTCTTCCTaGGTTCGTCCGGTGACATCT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRATSSS*VRPVTS
Trigger: AGATGTCACCGGACGAACCCAGGAAGAGCTTGTGGC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTAGAAAATGTCCTTCTTaGCGGGCAATGACCAGCGAT +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLRKCPS*RAMTSD
Trigger: ATCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATGCAGGATCCTCCATTaGTCTCTCTGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKCRILH*SLWPPQ
Trigger: CTGAGGAGGCCAGAGAGACCAATGGAGGATCCTGCA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCACTGCAAGTGCCAAGTaGATGCAGGATACTATTATC +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRTASAK*MQDTII
Trigger: GATAATAGTATCCTGCATCCACTTGGCACTTGCAGT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACCGAGGGTAACCAAATaGTCCAGCTCGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEPRVTK*SSSRGR
Trigger: TCTCCCCCTCGAGCTGGACCATTTGGTTACCCTCGG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTCTTTCTGGAGACAGTaGATGGCCATCCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSFWRQ*MAIPRV
Trigger: TACCCTCGGGATGGCCATCCACTGTCTCCAGAAAGA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATCTTTCCGCAACTTCTaGATACGGTCAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKSFRNF*IRSVLP
Trigger: TGGAAGCACTGACCGTATCCAGAAGTTGCGGAAAGA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGGCATTCTTTGGTGCTaGGGAGGGGAAGGCGGAACG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFGILWC*GGEGGT
Trigger: CGTTCCGCCTTCCCCTCCCCAGCACCAAAGAATGCC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATA +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFAPTGP*SACFLI
Trigger: TATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGACTCTCCAAGGAGCTaGACTTTTTCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEDSPRS*TFSNPE
Trigger: CTCTGGGTTTGAAAAAGTCCAGCTCCTTGGAGAGTC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGCGGGTAATGCTGCCTaGCAGAGACTGCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFAGNAA*QRLPLD
Trigger: GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWESNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMRSAAK*MYVDWV
Trigger: AACCCAATCAACATACATCCACTTGGCTGCAGATCT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCAGTGCCACAACCCGATaGCATAATGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFSATTR*HNGFWG
Trigger: TCCCCAGAATCCATTATGCCATCGGGTTGTGGCACT...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGGCGACTCCTCTTTCTaGTCTCGCTGTGGCATCGTT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYGDSSF*SRCGIV
Trigger: AACGATGCCACAGCGAGACCAGAAAGAGGAGTCGCC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLDYRFL*DLLSLV
Trigger: GACTAAAGACAGCAAATCTCACAGGAACCGATAGTC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTCCTGCTTGGTGCTCCTaGGCATGGCCACAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFPAWCS*AWPQAL
Trigger: AAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGG...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGCTCCTTGGCCAGAGTaGGAGCTCTTATCAGACAGA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYAPWPE*ELLSDR
Trigger: TCTGTCTGATAAGAGCTCTCACTCTGGCCAAGGAGC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGGGCTATTAGTGTTCTaGGCTACAAGGAGACACCGG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYGLLVF*ATRRHR
Trigger: CCGGTGTCTCCTTGTAGCTCAGAACACTAATAGCCC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTATCAGGATCCACGGGTaGCAGTCGGTCTCAGAACCC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFIRIHG*QSVSEP
Trigger: GGGTTCTGAGACCGACTGTCACCCGTGGATCCTGAT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCATCTCTCGACCCTCCTaGAATGCTACAATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFISRPS*NATMFL
Trigger: GAGGAACATTGTAGCATTTCAGGAGGGTCGAGAGAT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTTCTGTGGCTGTTTCTaGGTCCAAATCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRFCGCF*VQIPPA
Trigger: GGCAGGAGGGATTTGGACTCAGAAACAGCCACAGAA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTTCTGTGGCTGTTTCTaGGTCCAAATCCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYFCGCF*VQIPPA
Trigger: GGCAGGAGGGATTTGGACTCAGAAACAGCCACAGAA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCAAGTCAGGCTGTGTGTaGTTCTGTGACTATTTAAGG +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSKSGCV*FCDYLR
Trigger: CCTTAAATAGTCACAGAATCACACACAGCCTGACTT...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAAATCTTCAACAACATCTaGCAAGACATCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAEIFNNI*QDIIWI
Trigger: GATCCAGATGATGTCTTGGCAGATGTTGTTGAAGAT...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTCACCAGCAGTGGAGTaGCTAGTTTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFSPAVE*LVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAACTTGGAGATTTCATTaGCTGGCGGAAGACATCTTG +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKTWRFH*LAEDIL
Trigger: CAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGGACTCTTGTTTTGTTaGAGGGAAGCTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPGLLFC*READAS
Trigger: AGATGCATCAGCTTCCCTGCAACAAAACAAGAGTCC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISDAVSP*LVLLSM
Trigger: CATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGCATGGCTTGGAAAATaGCCCACACTCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAAWLGK*PTLCRI
Trigger: GATCCTGCAGAGTGTGGGGCATTTTCCAAGCCATGC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTTAATTGATTCAGGCTaGCTGGCCGGTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLIDSG*LAGVTD
Trigger: ATCTGTGACACCGGCCAGGCAGCCTGAATCAATTAA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTGGCACAAGGTCCATaGTCTTCGAGGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLAQGP*SSRLSN
Trigger: ATTTGAAAGCCTCGAAGAGCATGGACCTTGTGCCAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTTCAGAGTACCTTTCTaGTCAGCCTTTCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLFRVPF*SAFPPL
Trigger: TAAGGGTGGAAAGGCTGAGCAGAAAGGTACTCTGAA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTTCAGAGTACCTTTCTaGTCAGCCTTTCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEFRVPF*SAFPPL
Trigger: TAAGGGTGGAAAGGCTGAGCAGAAAGGTACTCTGAA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCATACTCAGATGGCCTTaGTCTTCCTTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESILRWP*SSFVVF
Trigger: GAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTAT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAGGATACCGGAGATCTaGCACCCTGAGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISRIPEI*HPELCG
Trigger: CCCACAGAGCTCAGGGTGGCAGATCTCCGGTATCCT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVTQLYG*SHGVLL
Trigger: CAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAAACCAGATATCTCCATaGCTGGAATGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVNQISP*LECGRE
Trigger: CTCCCTCCCACATTCCAGGCATGGAGATATCTGGTT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPRFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCCTGGTTCAAACCAGTaGTCAGGTTTTGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFPGSNQ*SGFAVF
Trigger: GAAGACAGCAAAACCTGAGCACTGGTTTGAACCAGG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCTAAAACTAGCAGTTaGATCCTTCTTGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSKTSS*ILLGSR
Trigger: TCTGCTACCAAGAAGGATGCAACTGCTAGTTTTAGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTCCTCCACCCCCATATaGCAAAATATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSSTPI*QNMISH
Trigger: ATGTGAAATCATATTTTGGCATATGGGGGTGGAGGA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCCTCCACCCCCATATaGCAAAATATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSSTPI*QNMISH
Trigger: ATGTGAAATCATATTTTGGCATATGGGGGTGGAGGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMLNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACTGCAGGGTTTCCACTaGGGCTCTCAATCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGELQGFH*GSQSCG
Trigger: TCCACAAGATTGAGAGCCCCAGTGGAAACCCTGCAG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQACLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTTAAATGCGGCCAGTTaGGCGGCCACTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLNAAS*AATSVS
Trigger: TGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKETSFRL*PPGCEA
Trigger: CGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACTTCCAAGTTCTGCGTaGAATCTGGAACAACCAGTT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKLPSSA*NLEQPV
Trigger: AACTGGTTGTTCCAGATTCCACGCAGAACTTGGAAG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKVEEHT*RFHCLA
Trigger: CGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCAC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQACGGST*RSTLGD
Trigger: ATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCAGGAGGCGGCACTTTaGTTTTCAAAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFQEAAL*FSKRHH
Trigger: ATGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAGTCCCGATTTTCCATaGACAGGAGGCGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSPDFP*TGGGTL
Trigger: CAAAGTGCCGCCTCCTGTCCATGGAAAATCGGGACT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACTCCATTGGTCTCTCTaGCCTCCTCAGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVLHWSL*PPQNHQ
Trigger: TTGGTGATTCTGAGGAGGCCAGAGAGACCAATGGAG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAATGCAGGATCCTCCATTaGTCTCTCTGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKECRILH*SLWPPQ
Trigger: CTGAGGAGGCCAGAGAGACCAATGGAGGATCCTGCA...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACGGCCCATCCGTCATTaGGCAGCAATAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGERPIRH*AAIDLS
Trigger: AGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAAACCTTGCTTTCATCTaGCACAAGGTCCATGCTCTT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPNLAFI*HKVHAL
Trigger: AAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAACCAGTGGATGGTATaGCTTGTTGACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKNQWMV*LVDLGI
Trigger: TATGCCAAGGTCAACAAGCCATACCATCCACTGGTT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTCCCCCGAGGTGCTGCTaGCAGATAGTCTACAGGATC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFPPRCC*QIVYRI
Trigger: GATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGG...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTGGCTGCCCCTCAAGTaGCCTAGGCTTAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYWLPLK*PRLNPE
Trigger: TTCTGGATTAAGCCTAGGCCACTTGAGGGGCAGCCA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGTACCTTCACATCACTaGCTGCCATTCAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFVPSHH*LPFRIS
Trigger: GCTAATCCTGAATGGCAGCCAGTGATGTGAAGGTAC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTATGTTGATTGGGTTTaGAGCTCAATGTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSYVDWV*SSMCHS
Trigger: AGAGTGGCACATTGAGCTCCAAACCCAATCAACATA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATGTTTCTCTCCCTTGTaGAAGTCTCAATTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKCFSPL*KSQFSC
Trigger: GCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACGTTTCCAGCTAAGTTaGCAGGAACTGGGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGERFQLS*QELGVL
Trigger: CAGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFFLVSL*HRFQLS
Trigger: ACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEKQPYR*NRRTLS
Trigger: AGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ACTGGGTCACTGCTTCTCCTCACCAGCAGTGGAGTGCCTAGTTTTAGAGCAGAATGTACACCACTCACATaGTATGGTTTTGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: TGSLLLLTSSGVPSFRAECTPLT*YGFAKH
Trigger: ATGCTTTGCAAAACCATACCATGTGAGTGGTGTACA...TTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGAGGAGAAGCAGTGACCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTGCTGCCAAATCCCATaGGAGGCGAGAGTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFCCQIP*EARVRE
Trigger: CTCCCTCACTCTCGCCTCTCATGGGATTTGGCAGCA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRSLHGH*PPKCFH
Trigger: ATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRGFQIN*FRLPGR
Trigger: CCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKFLSSQ*VNLAFI
Trigger: GATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGCTCCTTGGCCAGAGTaGGAGCTCTTATCAGACAGA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEAPWPE*ELLSDR
Trigger: TCTGTCTGATAAGAGCTCTCACTCTGGCCAAGGAGC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGATGGTATGGCTTGTTaGCCTTGGCATAGAGACCCT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEDGMAC*PWHRDP
Trigger: AGGGTCTCTATGCCAAGGTCAACAAGCCATACCATC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACCTTCTTTTTCTCTCTaGTTAGCAGTCATGCGTTAC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPPSFSL*LAVMRY
Trigger: GTAACGCATGACTGCTAATCAGAGAGAAAAAGAAGG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAGGAACTGGGAGTGCTaGGAAATACTTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYRNWEC*EILLWL
Trigger: CAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACCAGGGTGTGAAATGGGTACAGCACTTTaGTCTTTCATTAGAACTACA +
Preference number: 4 (lower is better)
Translates to: SRIPTGTTSFRLWPPGCEMGTAL*SFIRTT
Trigger: TGTAGTTCTAATGAAAGATCAAAGTGCTGTACCCAT...TTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAAAGCATCTGGGCTCTaGCGATCTGCAGGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEKASGL*RSAGFP
Trigger: TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTCACCAGCAGTGGAGTaGCTAGTTTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSPAVE*LVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCCTCCCGCTTGGACCTaGTGTTGTCTTCAATGCCTC +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISPPAWT*CCLQCL
Trigger: GAGGCATTGAAGACAACAGCAGGTCCAAGCGGGAGG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFDAVSP*LVLLSM
Trigger: CATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAAAATGCCCCACACTCTaGAGGATCCTCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKKCPTL*RILHWS
Trigger: AGACCAATGGAGGATCCTGCAGAGTGTGGGGCATTT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAAATGCCCCACACTCTaGAGGATCCTCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAKCPTL*RILHWS
Trigger: AGACCAATGGAGGATCCTGCAGAGTGTGGGGCATTT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTTCAGAGTACCTTTCTaGTCAGCCTTTCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFFRVPF*SAFPPL
Trigger: TAAGGGTGGAAAGGCTGAGCAGAAAGGTACTCTGAA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGAGGATACCGGAGATCTaGCACCCTGAGCTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVRIPEI*HPELCG
Trigger: CCCACAGAGCTCAGGGTGGCAGATCTCCGGTATCCT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGTCATGGGGTTCTTCTaGCGGGAATCCTGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFVMGFF*RESWVR
Trigger: CCGAACCCAGGATTCCCGGCAGAAGAACCCCATGAC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTQLYG*SHGVLL
Trigger: CAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAACCAGATATCTCCATaGCTGGAATGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYNQISP*LECGRE
Trigger: CTCCCTCCCACATTCCAGGCATGGAGATATCTGGTT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCTCGCTGTCCCCGAGTaGAGATGGTTACTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVLAVPE*RWLLLG
Trigger: GCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCTTCCATCTAATACCTaGTGGTCATCAGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVLPSNT*WSSEAM
Trigger: CATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGTGTGCAGGAGGTATTaGACACTCTGGTGGCAACGC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFVCRRY*TLWWQR
Trigger: GCGTTGCCACCAGAGTGTGCAATACCTCCTGCACAC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTCCCTCCTGCCTAATTaGACTAAGACCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESSLLPN*TKTSLS
Trigger: AGAAAGACTGGTCTTAGTGCAATTAGGCAGGAGGGA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTATGCCAAGACATCATCTaGATCCAGGATTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVCQDII*IQDSSI
Trigger: GATGGAGGAATCCTGGATCCAGATGATGTCTTGGCA...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTATCAGCAGGTGGGCCTaGCACTGGGTCACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFISRWA*HWVTAS
Trigger: AGAAGCAGTGACCCAGTGCCAGGCCCACCTGCTGAT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTGTGAAGCGCTTGGCTaGGTATCAGCAGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFCEALG*VSAGGP
Trigger: AGGCCCACCTGCTGATACCCAGCCAAGCGCTTCACA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGTTCTGCGTGGAATCTaGAACAACCAGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFVLRGI*NNQFQT
Trigger: AGTCTGAAACTGGTTGTTCCAGATTCCACGCAGAAC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCTTCCAAGTTCTGCGTaGAATCTGGAACAACCAGTT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLPSSA*NLEQPV
Trigger: AACTGGTTGTTCCAGATTCCACGCAGAACTTGGAAG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACAGGAGGCGGCACTTTaGTTTTCAAAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVQEAAL*FSKRHH
Trigger: ATGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATTTTCCTCCCAGCCTTaGTACTCGGGGACTCTTGTT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKFSSQP*YSGTLV
Trigger: AACAAGAGTCCCCGAGTACCAAGGCTGGGAGGAAAA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATTAACTGCAATCAGCTaGTCATTCATTCGCAGACGA +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLTAIS*SFIRRR
Trigger: TCGTCTGCGAATGAATGACCAGCTGATTGCAGTTAA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTCCATTGGTCTCTCTaGCCTCCTCAGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLHWSL*PPQNHQ
Trigger: TTGGTGATTCTGAGGAGGCCAGAGAGACCAATGGAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAACTGCAAGTGCCAAGTaGATGCAGGATACTATTATC +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKTASAK*MQDTII
Trigger: GATAATAGTATCCTGCATCCACTTGGCACTTGCAGT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGACTGCAAGTGCCAAGTaGATGCAGGATACTATTATC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWETASAK*MQDTII
Trigger: GATAATAGTATCCTGCATCCACTTGGCACTTGCAGT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCCGAGGGTAACCAAATaGTCCAGCTCGAGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFPRVTK*SSSRGR
Trigger: TCTCCCCCTCGAGCTGGACCATTTGGTTACCCTCGG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAACCAGTGGATGGTATaGCTTGTTGACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESNQWMV*LVDLGI
Trigger: TATGCCAAGGTCAACAAGCCATACCATCCACTGGTT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGCTGGAACCAGTGGATaGTATGGCTTGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRAGTSG*YGLLTL
Trigger: CAAGGTCAACAAGCCATACCATCCACTGGTTCCAGC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCTCTTTCCGCAACTTCTaGATACGGTCAGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVSFRNF*IRSVLP
Trigger: TGGAAGCACTGACCGTATCCAGAAGTTGCGGAAAGA...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTGTTTCCTGATAGGCTaGCATTCTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRCFLIG*HSLVLG
Trigger: CCCCAGCACCAAAGAATGCCAGCCTATCAGGAAACA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAGCTTATCAGTAACATaGAGAATTCCTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSLSVT*RIPNTK
Trigger: CTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACCATCTAATACCTGCTaGTCATCAGAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEPSNTC*SSEAMV
Trigger: GACCATGGCCTCTGATGACCAGCAGGTATTAGATGG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCTGTCCTTTGCCAATTaGAGGCCTTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVLSFAN*RPWPCP
Trigger: AGGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGTCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWESGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWERSAAK*MYVDWV
Trigger: AACCCAATCAACATACATCCACTTGGCTGCAGATCT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPRSAAK*MYVDWV
Trigger: AACCCAATCAACATACATCCACTTGGCTGCAGATCT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACTTGGTGCCATCCTGTaGGAGTCAACACATATATAT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLGAIL*ESTHIY
Trigger: ATATATATGTGTTGACTCCCACAGGATGGCACCAAG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGCGACTCCTCTTTCTaGTCTCGCTGTGGCATCGTT +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGDSSF*SRCGIV
Trigger: AACGATGCCACAGCGAGACCAGAAAGAGGAGTCGCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCATACATTCATTTTCGTaGAATAGTCCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFIHSFS*NSPSRL
Trigger: CAAGCGGGAGGGACTATTTCACGAAAATGAATGTAT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCATGAGAGGCGAGAGTaGGGGAGAGGATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVHERRE*GRGWFS
Trigger: GGAAAACCATCCTCTCCCTCACTCTCGCCTCTCATG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCTGAAGTTGATGTGCTaGTCTGGAAAATATACTGCT +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWELKLMC*SGKYTA
Trigger: AGCAGTATATTTTCCAGATCAGCACATCAACTTCAG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESFLSSQ*VNLAFI
Trigger: GATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGCTCCTTGGCCAGAGTaGGAGCTCTTATCAGACAGA +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISAPWPE*ELLSDR
Trigger: TCTGTCTGATAAGAGCTCTCACTCTGGCCAAGGAGC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTTTTCCCTTAGCTCCTaGTGTTTTGCTCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFFSLSS*CFAPIL
Trigger: AAGGATTGGAGCAAAACATCAGGAGCTAAGGGAAAA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAATCTCTCGACCCTCCTaGAATGCTACAATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAISRPS*NATMFL
Trigger: GAGGAACATTGTAGCATTTCAGGAGGGTCGAGAGAT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAATCTCTCGACCCTCCTaGAATGCTACAATGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKISRPS*NATMFL
Trigger: GAGGAACATTGTAGCATTTCAGGAGGGTCGAGAGAT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAGGAACTGGGAGTGCTaGGAAATACTTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKERNWEC*EILLWL
Trigger: CAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTGTGTGTGATTCTGTaGCTATTTAAGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLCVIL*LFKDMR
Trigger: CCTCATGTCCTTAAATAGTCACAGAATCACACACAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCTGTGTGTGATTCTGTaGCTATTTAAGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFLCVIL*LFKDMR
Trigger: CCTCATGTCCTTAAATAGTCACAGAATCACACACAG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCTGTGTGTGATTCTGTaGCTATTTAAGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESLCVIL*LFKDMR
Trigger: CCTCATGTCCTTAAATAGTCACAGAATCACACACAG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAATCTTCAACAACATCTaGCAAGACATCATCTGGATC +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPIFNNI*QDIIWI
Trigger: GATCCAGATGATGTCTTGGCAGATGTTGTTGAAGAT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTACCAATTGGCTTAAATaGGGCCAGTTGGGCGGCCAC +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFTNWLK*GQLGGH
Trigger: GTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTCACCAGCAGTGGAGTaGCTAGTTTTAGAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSPAVE*LVLEQK
Trigger: CTTCTGCTCTAAAACTAGGCACTCCACTGCTGGTGA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGGACTCTTGTTTTGTTaGAGGGAAGCTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVGLLFC*READAS
Trigger: AGATGCATCAGCTTCCCTGCAACAAAACAAGAGTCC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGCATGGCTTGGAAAATaGCCCACACTCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFAWLGK*PTLCRI
Trigger: GATCCTGCAGAGTGTGGGGCATTTTCCAAGCCATGC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGCATGGCTTGGAAAATaGCCCACACTCTGCAGGATC +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISAWLGK*PTLCRI
Trigger: GATCCTGCAGAGTGTGGGGCATTTTCCAAGCCATGC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGTTTGTCTTGTGGACTaGAAGTGCCAAGTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYVCLVD*KCQVDA
Trigger: TGCATCCACTTGGCACTTGCAGTCCACAAGACAAAC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTGGCACAAGGTCCATaGTCTTCGAGGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLAQGP*SSRLSN
Trigger: ATTTGAAAGCCTCGAAGAGCATGGACCTTGTGCCAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACTGGCACAAGGTCCATaGTCTTCGAGGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQALAQGP*SSRLSN
Trigger: ATTTGAAAGCCTCGAAGAGCATGGACCTTGTGCCAG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAATACTCAGATGGCCTTaGTCTTCCTTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEILRWP*SSFVVF
Trigger: GAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTAT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTG +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVPVLRF*CLPHLL
Trigger: CAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCATTTCAAATGTCAGTaGCTGGTTCAAACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESHFKCQ*LVQTSA
Trigger: AGCACTGGTTTGAACCAGGCACTGACATTTGAAATG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVGLSIL*SGSCSS
Trigger: TGAAGAACAAGAACCACTCCACAAGATTGAGAGCCC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGCCACAAGCTCTTCCTaGGTTCGTCCGGTGACATCT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVATSSS*VRPVTS
Trigger: AGATGTCACCGGACGAACCCAGGAAGAGCTTGTGGC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTGCAGGATCCTCCATTaGTCTCTCTGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVCRILH*SLWPPQ
Trigger: CTGAGGAGGCCAGAGAGACCAATGGAGGATCCTGCA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATCTCAAAGCATGGCTTaGAAAATGCCCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQASQSMA*KMPHTL
Trigger: CAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTGGTGTTGGAGAAGGTaGAACTTCACTCTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISWCWRR*NFTLGP
Trigger: TGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGAGCTCGAGGGGGAGATaGAGATCTAAAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRSSRGR*RSKDIC
Trigger: GCAAATGTCTTTAGATCTCCATCTCCCCCTCGAGCT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAGCTCGAGGGGGAGATaGAGATCTAAAGACATTTGC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQASSRGR*RSKDIC
Trigger: GCAAATGTCTTTAGATCTCCATCTCCCCCTCGAGCT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGACTCTCCAAGGAGCTaGACTTTTTCAAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEDSPRS*TFSNPE
Trigger: CTCTGGGTTTGAAAAAGTCCAGCTCCTTGGAGAGTC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGTCCCCGAGTGCAGATaGTTACTGCTTGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVVPECR*LLLGTE
Trigger: CTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGAC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATCAAATGTCAGTGCCTaGTTCAAACCAGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKSNVSA*FKPVLR
Trigger: CCTGAGCACTGGTTTGAACCAGGCACTGACATTTGA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGTACCTTCACATCACTaGCTGCCATTCAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRVPSHH*LPFRIS
Trigger: GCTAATCCTGAATGGCAGCCAGTGATGTGAAGGTAC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTCAGGCAGGATCAAATaGAGCGTGTGTTATACTTCA +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFSGRIK*SVCYTS
Trigger: TGAAGTATAACACACGCTCCATTTGATCCTGCCTGA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGAGTCCTGTAACCTCTaGGTGGTAACAATTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRESCNL*VVTIEG
Trigger: CCCTTCAATTGTTACCACCCAGAGGTTACAGGACTC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCAGATCTGCAGCCAAGTaGATGTATGTTGATTGGGTT +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFRSAAK*MYVDWV
Trigger: AACCCAATCAACATACATCCACTTGGCTGCAGATCT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRFLVSL*HRFQLS
Trigger: ACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATTTCTGGTCTCGCTGTaGCATCGTTTCCAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEFLVSL*HRFQLS
Trigger: ACTTAGCTGGAAACGATGCCACAGCGAGACCAGAAA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVKQPYR*NRRTLS
Trigger: AGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 72 bp GTTTCCACTGGGGCTCTCAATCTTGTGGAGTGGTTCTaGTTCTTCAAACACAGCAATCAGCTTGTCTTTATC +
Preference number: 4 (lower is better)
Translates to: VSTGALNLVEWF*FFKHSNQLVFI
Trigger: GATAAAGACAAGCTGATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAGATTGAGAGCCCCAGTGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
3UTR CAA 72 bp TGTAACAGTATAGTGTACTGGCCAGAAGCAAGGATTTaGGAGCCAGAACACCTGGGTGAAATTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CNSIVYWPEARI*EPEHLGEIPCF
Trigger: AAAGCAAGGAATTTCACCCAGGTGTTCTGGCTCCAAAATCCTTGCTTCTGGCCAGTACACTATACTGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYDYRFL*DLLSLV
Trigger: GACTAAAGACAGCAAATCTCACAGGAACCGATAGTC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAATGGAAAATATACTGCTaGATCCACCCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEWKIYC*IHPRAV
Trigger: CACAGCTCTGGGGTGGATTCAGCAGTATATTTTCCA...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGFQIN*FRLPGR
Trigger: CCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGATTTCACGGCCTTCATaGCCCAGCAGTCAGATCTGC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVISRPS*PSSQIC
Trigger: GCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAAT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGACTATTTAAGGACATaGGGGAGAAAAGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFDYLRT*GRKEFH
Trigger: GTGAAACTCTTTTCTCCCTCATGTCCTTAAATAGTC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAAACACCAGAAAAAGTaGTGGTACAAACAACAGGTT +
Preference number: 4 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKKHQKK*WYKQQV
Trigger: AACCTGTTGTTTGTACCATCACTTTTTCTGGTGTTT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAAAACACCAGAAAAAGTaGTGGTACAAACAACAGGTT +
Preference number: 4 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPKHQKK*WYKQQV
Trigger: AACCTGTTGTTTGTACCATCACTTTTTCTGGTGTTT...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTAAACACCAGAAAAAGTaGTGGTACAAACAACAGGTT +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLKHQKK*WYKQQV
Trigger: AACCTGTTGTTTGTACCATCACTTTTTCTGGTGTTT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAGGACTCTTGTTTTGTTaGAGGGAAGCTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEGLLFC*READAS
Trigger: AGATGCATCAGCTTCCCTGCAACAAAACAAGAGTCC...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTATCTCAAAGGTGAGCTaGTCGCTTGTCTCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFISKVS*SLVSRE
Trigger: CTCTCTGGAGACAAGCGAGCAGCTCACCTTTGAGAT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAGATTCCCCATTAACTaGAATCAGCTGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESRFPIN*NQLVIH
Trigger: ATGAATGACCAGCTGATTGCAGTTAATGGGGAATCT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAAATGCCCCACACTCTaGAGGATCCTCCATTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISKCPTL*RILHWS
Trigger: AGACCAATGGAGGATCCTGCAGAGTGTGGGGCATTT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAPMSEP*FHLAQG
Trigger: ACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYPMSEP*FHLAQG
Trigger: ACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGAAAGCGGAGGTTGTGTaGATTCCCATCTGGACCCCT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVKAEVV*IPIWTP
Trigger: AGGGGTCCAGATGGGAATGCACACAACCTCCGCTTT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGATGTCCACGTGTCTaGACATCAGCACAGGTTATC +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGCPRV*TSAQVI
Trigger: GATAACCTGTGCTGATGTGCAGACACGTGGACATCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACGTTTCCCCCACTTTTaGATCAAACTCTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGERFPHF*IKLSRK
Trigger: CTTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRPVLRF*CLPHLL
Trigger: CAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTACCCTGAGCCTGTGTaGAGGAGGTATTGCACACTC +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFYPEPV*RRYCTL
Trigger: GAGTGTGCAATACCTCCTGCACACAGGCTCAGGGTA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTTCACATCACTGGCTaGCATTCAGGATTAGCAACT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLHITG*HSGLAT
Trigger: AGTTGCTAATCCTGAATGGCAGCCAGTGATGTGAAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCCCAGCAGTCAGATCTaGAGCCAAGTGGATGTATGT +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISPSSQI*SQVDVC
Trigger: ACATACATCCACTTGGCTGCAGATCTGACTGCTGGG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAAGTCCAAATCCCTCCTaGCTAATTGCACTAAGACCA +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGESPNPS*LIALRP
Trigger: TGGTCTTAGTGCAATTAGGCAGGAGGGATTTGGACT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTGTCTCAAAAGCATCTaGGCTCTGCCGATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFCLKSI*ALPICR
Trigger: CCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGTTCTGCGTGGAATCTaGAACAACCAGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAVLRGI*NNQFQT
Trigger: AGTCTGAAACTGGTTGTTCCAGATTCCACGCAGAAC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATACATGTATTCCCAATaGGCCTCCTTCCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEYMYSQ*ASFPRN
Trigger: ATTTCTGGGGAAGGAGGCCCATTGGGAATACATGTA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVVEEHT*RFHCLA
Trigger: CGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCAC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAGAAAATGTCCTTCTTaGCGGGCAATGACCAGCGAT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKERKCPS*RAMTSD
Trigger: ATCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGTTTCCATAGCTTCGTaGTTGGACTTTCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVVSIAS*LDFPKR
Trigger: TCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAAC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCGGCCCATCCGTCATTaGGCAGCAATAGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVRPIRH*AAIDLS
Trigger: AGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGESRMWC*RRWNFT
Trigger: AGTGAAGTTCCACCTTCTCCAACACCACATTCTGCT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTCTTTCTGGAGACAGTaGATGGCCATCCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFSFWRQ*MAIPRV
Trigger: TACCCTCGGGATGGCCATCCACTGTCTCCAGAAAGA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAACCAGTGGATGGTATaGCTTGTTGACCTTGGCATA +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQANQWMV*LVDLGI
Trigger: TATGCCAAGGTCAACAAGCCATACCATCCACTGGTT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGCTGGAACCAGTGGATaGTATGGCTTGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFAGTSG*YGLLTL
Trigger: CAAGGTCAACAAGCCATACCATCCACTGGTTCCAGC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGCTGGAACCAGTGGATaGTATGGCTTGTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISAGTSG*YGLLTL
Trigger: CAAGGTCAACAAGCCATACCATCCACTGGTTCCAGC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGTCAGCTGGAACCAGTaGATGGTATGGCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFVSWNQ*MVWLVD
Trigger: GTCAACAAGCCATACCATCCACTGGTTCCAGCTGAC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTGTTTCCTGATAGGCTaGCATTCTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFCFLIG*HSLVLG
Trigger: CCCCAGCACCAAAGAATGCCAGCCTATCAGGAAACA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTATACGGCTGCAGTCATaGGGTTCTTCTGCCGGGAAT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFIRLQS*GSSAGN
Trigger: ATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTAT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGACCAAAATCTTTGCTTaGAGATTCCGATTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWETKIFA*RFRFLS
Trigger: GGACAAAAATCGGAATCTCCAAGCAAAGATTTTGGT...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGATCTACTTAGAGGTTaGGGTTTCAGCTTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEDLLRG*GFSFLK
Trigger: CTTTAAAAAGCTGAAACCCCAACCTCTAAGTAGATC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCACTCTAAAGGTGCCTaGCTTAAGAGAGATGACAGA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYHSKGA*LKRDDR
Trigger: TCTGTCATCTCTCTTAAGCCAGGCACCTTTAGAGTG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTATGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTAGTGCCACAACCCGATaGCATAATGGATTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFSATTR*HNGFWG
Trigger: TCCCCAGAATCCATTATGCCATCGGGTTGTGGCACT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGELKIFT*CHPVGV
Trigger: GACTCCCACAGGATGGCACCAAGTAAAGATCTTAAG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCAGAAAACGAATGCAGTaGTTACAGGTTTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFRKRMQ*LQVWGN
Trigger: ATTTCCCCAAACCTGTAACCACTGCATTCGTTTTCT...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTCTTCAATGCCTCGGATaGAGAGTCCTAGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFLQCLG*RVLESF
Trigger: GAAGGATTCTAGGACTCTTCATCCGAGGCATTGAAG...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCTTCAATGCCTCGGATaGAGAGTCCTAGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISLQCLG*RVLESF
Trigger: GAAGGATTCTAGGACTCTTCATCCGAGGCATTGAAG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGATACATTCATTTTCGTaGAATAGTCCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRIHSFS*NSPSRL
Trigger: CAAGCGGGAGGGACTATTTCACGAAAATGAATGTAT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTGGAAAATATACTGCTaGATCCACCCCAGAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISWKIYC*IHPRAV
Trigger: CACAGCTCTGGGGTGGATTCAGCAGTATATTTTCCA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTTTTCCCTTAGCTCCTaGTGTTTTGCTCCAATCCTT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRFSLSS*CFAPIL
Trigger: AAGGATTGGAGCAAAACATCAGGAGCTAAGGGAAAA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR TCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAQVDVC*LGLELN
Trigger: ATTGAGCTCCAAACCCAATCAACATACATCCACTTG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACAAGTGGATGTATGTTaGTTGGGTTTGGAGCTCAAT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEQVDVC*LGLELN
Trigger: ATTGAGCTCCAAACCCAATCAACATACATCCACTTG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAGGAACTGGGAGTGCTaGGAAATACTTCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFRNWEC*EILLWL
Trigger: CAGCCACAGAAGTATTTCTCAGCACTCCCAGTTCCT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACTGTGTGTGATTCTGTaGCTATTTAAGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGELCVIL*LFKDMR
Trigger: CCTCATGTCCTTAAATAGTCACAGAATCACACACAG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGGTAAGGATGCGTACTaGCTCTCCATCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVGKDAY*LSIPSK
Trigger: CTTTGAAGGGATGGAGAGGCAGTACGCATCCTTACC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGGTAAGGATGCGTACTaGCTCTCCATCCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFGKDAY*LSIPSK
Trigger: CTTTGAAGGGATGGAGAGGCAGTACGCATCCTTACC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCATAACACTGTCCTTTaGCAATTGGAGGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVHNTVL*QLEALA
Trigger: GGCCAAGGCCTCCAATTGGCAAAGGACAGTGTTATG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACCAGTGCTCAGGTTTTaGTGTCTTCCACATCTTTTG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEPVLRF*CLPHLL
Trigger: CAAAAGATGTGGAAGACAGCAAAACCTGAGCACTGG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACCACTTCGAACAAATTaGAAACACTCTAAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKPLRTN*KHSKGA
Trigger: GGCACCTTTAGAGTGTTTGCAATTTGTTCGAAGTGG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATCCAAAGAAAACGAATaGAGTGGTTACAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKSKENE*SGYRFG
Trigger: CCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTCCAAAGAAAACGAATaGAGTGGTTACAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYSKENE*SGYRFG
Trigger: CCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAATCCCTCCTGCCTAATTaGACTAAGACCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKESLLPN*TKTSLS
Trigger: AGAAAGACTGGTCTTAGTGCAATTAGGCAGGAGGGA...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTAATCTCCCCACCAATTaGCTTAAATGCGGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFNLPTN*LKCGQL
Trigger: CAACTGGCCGCATTTAAGCCAATTGGTGGGGAGATT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGTTTCCATAGCTTCGTaGTTGGACTTTCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKVSIAS*LDFPKR
Trigger: TCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAAC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATGTTTCCATAGCTTCGTaGTTGGACTTTCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYVSIAS*LDFPKR
Trigger: TCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAAC...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTCCATTGGTCTCTCTaGCCTCCTCAGAATCACCAA +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLHWSL*PPQNHQ
Trigger: TTGGTGATTCTGAGGAGGCCAGAGAGACCAATGGAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGAAAGTGGTTCACTCTaGCATAATTGGGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRESGSL*HNWGPF
Trigger: AAATGGACCCCAATTATGCCAGAGTGAACCACTTTC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCAGCTTATCAGTAACATaGAGAATTCCTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: SCLIALRPVFLLLVDSESSLSVT*RIPNTK
Trigger: CTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGTACCTTCACATCACTaGCTGCCATTCAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISVPSHH*LPFRIS
Trigger: GCTAATCCTGAATGGCAGCCAGTGATGTGAAGGTAC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATATGTTGATTGGGTTTaGAGCTCAATGTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEYVDWV*SSMCHS
Trigger: AGAGTGGCACATTGAGCTCCAAACCCAATCAACATA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATTGGATGTATGTTGATTaGGTTTGGAGCTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYWMYVD*VWSSMC
Trigger: GCACATTGAGCTCCAAACCCAATCAACATACATCCA...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLSKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACTTGGTGCCATCCTGTaGGAGTCAACACATATATAT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKLGAIL*ESTHIY
Trigger: ATATATATGTGTTGACTCCCACAGGATGGCACCAAG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGAAGAGTCTTTGGGGTTaGTTCATTTCCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRKSLWG*FISCSQ
Trigger: TTGGCTACAGGAAATGAACCAACCCCAAAGACTCTT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAAGAGTCTTTGGGGTTaGTTCATTTCCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYKSLWG*FISCSQ
Trigger: TTGGCTACAGGAAATGAACCAACCCCAAAGACTCTT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAAGCAGCCCTACAGATaGAACAGGAGAACACTTTCT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEKQPYR*NRRTLS
Trigger: AGAAAGTGTTCTCCTGTTCCATCTGTAGGGCTGCTT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GAATTCTCAGGCTATCTGAGAGGATTATTCACAATTACAGCTCTTCAAAGCAACTGGAGCCAGAACACCTaGGTGAAATTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: EFSGYLRGLFTITALQSNWSQNT*VKFLAL
Trigger: CAAAGCAAGGAATTTCACCCAGGTGTTCTGGCTCCA...GTTGCTTTGAAGAGCTGTAATTGTGAATAATCCTCTCAGATAGCCTGAGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTTGTTGCAGGGAAGCTaGTGCATCTGTTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLLQGS*CICFRT
Trigger: AGTCCTGAAACAGATGCATCAGCTTCCCTGCAACAA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTGAAGTTGATGTGCTaGTCTGGAAAATATACTGCT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLKLMC*SGKYTA
Trigger: AGCAGTATATTTTCCAGATCAGCACATCAACTTCAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGAATTGTTGCTTGGCTTaGTGGAGCCTCTGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVNCCLA*WSLCLS
Trigger: TGACAGACAGAGGCTCCATCAAGCCAAGCAACAATT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAAACACCAGAAAAAGTaGTGGTACAAACAACAGGTT +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVKHQKK*WYKQQV
Trigger: AACCTGTTGTTTGTACCATCACTTTTTCTGGTGTTT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCTGTCTTCCAAGTTCTaGGTGGAATCTGGAACAACC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVLSSKF*VESGTT
Trigger: GGTTGTTCCAGATTCCACGCAGAACTTGGAAGACAG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTGGCACAAGGTCCATaGTCTTCGAGGCTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLAQGP*SSRLSN
Trigger: ATTTGAAAGCCTCGAAGAGCATGGACCTTGTGCCAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAGACATTTGCTGATGTaGATGGTTCCCGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISRHLLM*MVPESG
Trigger: ACCACTTTCGGGAACCATGCACATCAGCAAATGTCT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGATACTCAGATGGCCTTaGTCTTCCTTCGTCGTCTTC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVILRWP*SSFVVF
Trigger: GAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTAT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTTCCATCTAATACCTaGTGGTCATCAGAGGCCATG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLPSNT*WSSEAM
Trigger: CATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCACTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQALNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACTCAATCTTGTGGAGTaGTTCTTGTTCTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKLNLVE*FLFFKH
Trigger: GTGTTTGAAGAACAAGAACCACTCCACAAGATTGAG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGGGCTCTCAATCTTGTaGAGTGGTTCTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISGLSIL*SGSCSS
Trigger: TGAAGAACAAGAACCACTCCACAAGATTGAGAGCCC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGTTCTGCGTGGAATCTaGAACAACCAGTTTCAGACT +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISVLRGI*NNQFQT
Trigger: AGTCTGAAACTGGTTGTTCCAGATTCCACGCAGAAC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTACATGTATTCCCAATaGGCCTCCTTCCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFYMYSQ*ASFPRN
Trigger: ATTTCTGGGGAAGGAGGCCCATTGGGAATACATGTA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGATCTACTTAGAGGTTaGGGTTTCAGCTTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PGLLNTLKACSPKCWERVDLLRG*GFSFLK
Trigger: CTTTAAAAAGCTGAAACCCCAACCTCTAAGTAGATC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTCTAAAAGTTTTCAATaGTCTGTCCTCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: NWELFPAPRHITDYSLVFSKSFQ*SVLFHL
Trigger: GAGATGAAAGAGGACAGACCATTGAAAACTTTTAGA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGGACTCTTGTTTTGTTaGAGGGAAGCTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVGLLFC*READAS
Trigger: AGATGCATCAGCTTCCCTGCAACAAAACAAGAGTCC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAGATTCCCCATTAACTaGAATCAGCTGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKERFPIN*NQLVIH
Trigger: ATGAATGACCAGCTGATTGCAGTTAATGGGGAATCT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAGTGCCAAGTGGATaGAGGATACTATTATCATTT +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRQVPSG*RILLSF
Trigger: AAATGATAATAGTATCCTGCATCCACTTGGCACTTG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCAAGTGCCAAGTGGATaGAGGATACTATTATCATTT +
Preference number: 4 (lower is better)
Translates to: LELLIVAWLDGASVCHKYQVPSG*RILLSF
Trigger: AAATGATAATAGTATCCTGCATCCACTTGGCACTTG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFPMSEP*FHLAQG
Trigger: ACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVPMSEP*FHLAQG
Trigger: ACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAGACATTTGCTGATGTaGATGGTTCCCGAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFRHLLM*MVPESG
Trigger: ACCACTTTCGGGAACCATGCACATCAGCAAATGTCT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR GCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTCCAAAGAAAACGAATaGAGTGGTTACAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISSKENE*SGYRFG
Trigger: CCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTTCCAAGTTCTGCGTaGAATCTGGAACAACCAGTT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLPSSA*NLEQPV
Trigger: AACTGGTTGTTCCAGATTCCACGCAGAACTTGGAAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFSRMWC*RRWNFT
Trigger: AGTGAAGTTCCACCTTCTCCAACACCACATTCTGCT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAACCAAAATCTTTGCTTaGAGATTCCGATTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGETKIFA*RFRFLS
Trigger: GGACAAAAATCGGAATCTCCAAGCAAAGATTTTGGT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACCAAAATCTTTGCTTaGAGATTCCGATTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTKIFA*RFRFLS
Trigger: GGACAAAAATCGGAATCTCCAAGCAAAGATTTTGGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGAGCTTATCAGTAACATaGAGAATTCCTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRSLSVT*RIPNTK
Trigger: CTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGCTTGTGTTCTCATTTaGGCCAGCTTGTATGTTTTA +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKEACVLI*ASLYVL
Trigger: TAAAACATACAAGCTGGCCCAAATGAGAACACAAGC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTAAGATAAGAGTAAGCTaGGGTAGAGGGATGTCCTAT +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFKIRVS*GRGMSY
Trigger: ATAGGACATCCCTCTACCCCAGCTTACTCTTATCTT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAGGAATGTTCTGGCTTaGCTATGTTTAGTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKERNVLA*LCLVVY
Trigger: GTAGACTACTAAACATAGCCAAGCCAGAACATTCCT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCTTAAGATCTTTACTTaGTGCCATCCTGTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVLKIFT*CHPVGV
Trigger: GACTCCCACAGGATGGCACCAAGTAAAGATCTTAAG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTAAGAGTCTTTGGGGTTaGTTCATTTCCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISKSLWG*FISCSQ
Trigger: TTGGCTACAGGAAATGAACCAACCCCAAAGACTCTT...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTAAGAGTCTTTGGGGTTaGTTCATTTCCTGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFKSLWG*FISCSQ
Trigger: TTGGCTACAGGAAATGAACCAACCCCAAAGACTCTT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 72 bp GTTCTGGCTTGGCTATGTTTAGTAGTCTACAGTAGTTaGGTTAAAATATGGAACATAGTGAAGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLAWLCLVVYSS*VKIWNIVKSCW
Trigger: CCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTACTAAACATAGCCAAGCCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
3UTR CAA 72 bp GGGAAAAGAGAAATGAGCTTTATGAGCCTCCTAACATaGTTAGGTGGCTTTTCTTCAGAAGATCACTTTAGC +
Preference number: 4 (lower is better)
Translates to: GKREMSFMSLLT*LGGFSSEDHFS
Trigger: GCTAAAGTGATCTTCTGAAGAAAAGCCACCTAACAATGTTAGGAGGCTCATAAAGCTCATTTCTCTTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGTTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVFLSSQ*VNLAFI
Trigger: GATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAA...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCCACTCTCACTGATTTaGACAACTCTGAAAGCGTTT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVPLSLI*TTLKAF
Trigger: AAACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGACTATTTAAGGACATaGGGGAGAAAAGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFDYLRT*GRKEFH
Trigger: GTGAAACTCTTTTCTCCCTCATGTCCTTAAATAGTC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAAGTCAGGCTGTGTGTaGTTCTGTGACTATTTAAGG +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFKSGCV*FCDYLR
Trigger: CCTTAAATAGTCACAGAATCACACACAGCCTGACTT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCATTGGACCAAAATCTTTaGTTGGAGATTCCGATTTTT +
Preference number: 4 (lower is better)
Translates to: WLDGASVCHKYNVSFFQALDQNL*LEIPIF
Trigger: AAAAATCGGAATCTCCAAGCAAAGATTTTGGTCCAA...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR GCA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATTGGACCAAAATCTTTaGTTGGAGATTCCGATTTTT +
Preference number: 4 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKLDQNL*LEIPIF
Trigger: AAAAATCGGAATCTCCAAGCAAAGATTTTGGTCCAA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGACTGCAAGTGCCAAGTaGATGCAGGATACTATTATC +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVTASAK*MQDTII
Trigger: GATAATAGTATCCTGCATCCACTTGGCACTTGCAGT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGGAAAGTGGTTCACTCTaGCATAATTGGGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVESGSL*HNWGPF
Trigger: AAATGGACCCCAATTATGCCAGAGTGAACCACTTTC...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS-3UTR CCA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAAGCTTATCAGTAACATaGAGAATTCCTAACACCAAG +
Preference number: 4 (lower is better)
Translates to: FFQAGSNGACVILQARKESLSVT*RIPNTK
Trigger: CTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTAGGAATGTTCTGGCTTaGCTATGTTTAGTAGTCTAC +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFRNVLA*LCLVVY
Trigger: GTAGACTACTAAACATAGCCAAGCCAGAACATTCCT...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR TCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTGAAGTTGATGTGCTaGTCTGGAAAATATACTGCT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLKLMC*SGKYTA
Trigger: AGCAGTATATTTTCCAGATCAGCACATCAACTTCAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTCCTCCACCCCCATATaGCAAAATATGATTTCACAT +
Preference number: 4 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFSSTPI*QNMISH
Trigger: ATGTGAAATCATATTTTGGCATATGGGGGTGGAGGA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCAAGTGCCAAGTGGATaGAGGATACTATTATCATTT +
Preference number: 4 (lower is better)
Translates to: CISSTDLILLGNGIMARVQVPSG*RILLSF
Trigger: AAATGATAATAGTATCCTGCATCCACTTGGCACTTG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR GCA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTTGGACCAAAATCTTTaGTTGGAGATTCCGATTTTT +
Preference number: 4 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFLDQNL*LEIPIF
Trigger: AAAAATCGGAATCTCCAAGCAAAGATTTTGGTCCAA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CCA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTTTTCATTCTCCATACTaGCAATCATATGTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: VSILLHLKVFNGLSSFISFHSPY*QSYVFE
Trigger: TTCGAACACATATGATTGCCAGTATGGAGAATGAAA...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp GCCGCGCTCACCTTCTCCCGGGTCTTCAGGTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCCTTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AALTFSRVFRYRCSA*WVSSPTRSWPSLQG
Trigger: GCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGTGAGCGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS GCA 90 bp AGATATCATGCCTTCTCCCGGGTCTTCAGGTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCCTTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RYHAFSRVFRYRCSA*WVSSPTRSWPSLQG
Trigger: GCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGCATGATATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471958.1
CDS GCA 90 bp TCTTCTGCCGGGAATCCTGGGTTCGGTAAGGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTCTGCCTGTTTCCTGATAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SSAGNPGFGKGTGLG*PHGALVCLFPDRLA
Trigger: TGCCAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTACCGAACCCAGGATTCCCGGCAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp CTGGGTTCGGTAAGGGTACTGGTCTGGGCTGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATAGGCTGGCATTCTTTGGTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LGSVRVLVWAAPTGP*SACFLIGWHSLVLG
Trigger: CCCCAGCACCAAAGAATGCCAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTACCGAACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQTVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAAACCCTGGCAGGTGCCTaGGCTGCAGCCGCGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LPTNWLKCGQLGGHFCLKTLAGA*AAAAPH
Trigger: GTGGGGCGCGGCTGCAGCCAAGGCACCTGCCAGGGT...TTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS CCA 90 bp GGAAGGCGGAACGTCTTGTCGAAAGGGTCCTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTGAGGATACCGGAGATCTGCCACCCT +
Preference number: 5 (lower is better)
Translates to: GRRNVLSKGSFVLGS*RGWVVLRIPEICHP
Trigger: AGGGTGGCAGATCTCCGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACAAGACGTTCCGCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp GGACCGGGCTGGCCTCGGTGGCACTCAGCTATACGGCTGCAGTCATaGGGTTCTTCTGCCGGGAATCCTGGGTTCGGTAAGGGTACTGGT +
Preference number: 5 (lower is better)
Translates to: GPGWPRWHSAIRLQS*GSSAGNPGFGKGTG
Trigger: ACCAGTACCCTTACCGAACCCAGGATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDLKCGQ*GGHFCL
Trigger: GAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp TCCTTTCTGGACCGGGCTGGCCTCGGTGGCACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTGCCGGGAATCCTGGGTTCGGTAAGG +
Preference number: 5 (lower is better)
Translates to: SFLDRAGLGGTQLYG*SHGVLLPGILGSVR
Trigger: CCTTACCGAACCCAGGATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTCCAGAAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCTTGGACCTGCTGTaGTCTTCAATGCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDRLDLL*SSMPRM
Trigger: CATCCGAGGCATTGAAGACAACAGCAGGTCCAAGCG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQRGGAH*EISLPG
Trigger: GCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQEGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp CCCTGGATAATAGGGAAGCTCCCTTTCCTTGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTACAGGATCTGCGGGTCCTCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: PWIIGKLPFLVEPPR*CWQIVYRICGSSPG
Trigger: CCCAGGGGAGGACCCGCAGATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTACAAGGAAAGGGAGCTTCCCTATTATCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp AACGTCTTGTCGAAAGGGTCCTTTGTGCTGGGGAGCTGGCGGGGGTaGGTAGTGCTGAGGATACCGGAGATCTGCCACCCTGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: NVLSKGSFVLGSWRG*VVLRIPEICHPELC
Trigger: ACAGAGCTCAGGGTGGCAGATCTCCGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACAAGACGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp AAAGGTAGAGTAGACACCTTCCTTTCTGGACCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTGCAGTCATGGGGTTCTTCTGCCGGG +
Preference number: 5 (lower is better)
Translates to: KGRVDTFLSGPGWPR*HSAIRLQSWGSSAG
Trigger: CCCGGCAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCTACTCTACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGCTGGGGCTCTCAATCTaGTGGAGTGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQLGLSI*WSGSCS
Trigger: AGAACAAGAACCACTCCACAAGATTGAGAGCCCCAG...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGACAATTCAGAGCTCCTaGGCCAGAGTGAGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQTIQSS*ARVRAL
Trigger: AAGAGCTCTCACTCTGGCCAAGGAGCTCTGAATTGT...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp AAATGTCCTTCTTGGCGGGCAATGACCAGCGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATGGCCACAAGCTCTTCCTGGGTTCGT +
Preference number: 5 (lower is better)
Translates to: KCPSWRAMTSDAVSP*LVLLSMATSSSWVR
Trigger: ACGAACCCAGGAAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAGGACATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGTTGGGAGGAAACTTTaGCGCCGGCTCCCAACTCCT +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLVGRKL*RRLPTP
Trigger: AGGAGTTGGGAGCCGGCGCAAAAGTTTCCTCCCAAC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CAA 90 bp CTGAGGCTCCACCTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LRLHLGAGNAAWQRLPLDPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...GTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAGGTGGAGCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp AGAAAGGGCAAAGGTAGAGTAGACACCTTCCTTTCTGGACCGGGCTaGCCTCGGTGGCACTCAGCTATACGGCTGCAGTCATGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: RKGKGRVDTFLSGPG*PRWHSAIRLQSWGS
Trigger: AGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCTACTCTACCTTTGCCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLKCGQ*GGHFCL
Trigger: GAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCCCTTCAAAGCGGAGGTaGTGTGCATTCCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCPSKRR*CAFPSG
Trigger: TCCAGATGGGAATGCACACAACCTCCGCTTTGAAGG...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLEGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSFPAK*AGTGSA
Trigger: AGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp CTTTGGTCGGGAGCTCCTGTTGAGCTGGCCAAGACTCAGCAGATTTaGCCTGTGATTGAGGGCTCTCTGCCTAATCCTGCTTCCTCCCTT +
Preference number: 5 (lower is better)
Translates to: LWSGAPVELAKTQQI*PVIEGSLPNPASSL
Trigger: AAGGGAGGAAGCAGGATTAGGCAGAGAGCCCTCAATCACAGGGCAAATCTGCTGAGTCTTGGCCAGCTCAACAGGAGCTCCCGACCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494482.1
CDS CCA 90 bp TCTTCCAAGTTCTGCGTGGAATCTGGAACAACCAGTTTCAGACTCTaGCCACCAGGGTGTGAAGCGCTTGGCTGGGTATCAGCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSKFCVESGTTSFRL*PPGCEALGWVSAGG
Trigger: CCCACCTGCTGATACCCAGCCAAGCGCTTCACACCCTGGTGGCCAGAGTCTGAAACTGGTTGTTCCAGATTCCACGCAGAACTTGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp GTCTCCCCCTGCTTGGTGCTCCTGAGCATGGCCACAAGCTCTTCCTaGGTTCGTCCGGTGACATCTCTCCCATTTACCTCCAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: VSPCLVLLSMATSSS*VRPVTSLPFTSKIL
Trigger: CAGAATTTTGGAGGTAAATGGGAGAGATGTCACCGGACGAACCCAGGAAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGGGGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp GTGGCTGTAATCTTCGAGGCCCAATCCCAGAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACTCTCGGCCCATCCGTCATTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VAVIFEAQSQSRMWC*RRWNFTLGPSVIGQ
Trigger: CTGCCCAATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGCCTCGAAGATTACAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACGCAGCTGGCCCTCCTaGCAGGGCACCACGATGCCC +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVRSWPS*QGTTMP
Trigger: GGGCATCGTGGTGCCCTGCAAGGAGGGCCAGCTGCG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEAVSPC*VLLSMA
Trigger: GGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCGGCCCATCCGTCATaGGGCAGCAATAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSAHPS*GSNRPF
Trigger: GAAAGGTCTATTGCTGCCCAATGACGGATGGGCCGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTATCGGCCCATCCGTCATaGGGCAGCAATAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLSAHPS*GSNRPF
Trigger: GAAAGGTCTATTGCTGCCCAATGACGGATGGGCCGA...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGGAAGGCGGAACGTCTaGTCGAAAGGGTCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSGRRNV*SKGSFV
Trigger: CACAAAGGACCCTTTCGACAAGACGTTCCGCCTTCC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMTVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp CCTGGGAGAGTTTCTACCAGGGAAGAATCCAGTGGTGCCAGAGGCTaGTTTTTATCCTGCTGCTATGCAAATCAGGCCCCCACTGCCCTT +
Preference number: 5 (lower is better)
Translates to: PGRVSTREESSGARG*FLSCCYANQAPTAL
Trigger: AAGGGCAGTGGGGGCCTGATTTGCATAGCAGCAGGATAAAAACCAGCCTCTGGCACCACTGGATTCTTCCCTGGTAGAAACTCTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488622.1
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCAATAGTCCCTCCCGCTaGGACCTGCTGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSNSPSR*DLLLSS
Trigger: TGAAGACAACAGCAGGTCCAAGCGGGAGGGACTATT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESAVSPC*VLLSMA
Trigger: GGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGC...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTGTCGAAAGGGTCCTTaGTGCTGGGGAGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLCRKGP*CWGAGG
Trigger: CCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGTTTTCAAACCCAGAGTaGGACCAAAATCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQFSNPE*DQNLCL
Trigger: CAAGCAAAGATTTTGGTCCAACTCTGGGTTTGAAAA...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGCGCACGGGGCCAGAGTaGGGAGGAAACTTTTGCGCC +
Preference number: 5 (lower is better)
Translates to: LRTPTMLLRSLLGAILWERTGPE*GGNFCA
Trigger: GGCGCAAAAGTTTCCTCCCAACTCTGGCCCCGTGCG...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCGGAGCGGGTAATGCTGCCTGGCAGAGACTGCCTCTGGACCGCCAGTCTCAGGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 5 (lower is better)
Translates to: LGAGNAAWQRLPLDRQSQAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...CTGAGACTGGCGGTCCAGAGGCAGTCTCTGCCAGGCAGCATTACCCGCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCAAGGAGACACCGGATaGAGTTTTCCCAAGGCCATA +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLQGDTG*SFPKAI
Trigger: TATGGCCTTGGGAAAACTCAATCCGGTGTCTCCTTG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCCCACCAATTGGCTTAAATGCGGCCAGTTGGGCGGCCACTTCTGTCTCAAACCAGAAGCAAGGATTTaGGAGCCAGAACACCTGGGT +
Preference number: 5 (lower is better)
Translates to: LPTNWLKCGQLGGHFCLKPEARI*EPEHLG
Trigger: ACCCAGGTGTTCTGGCTCCAAAATCCTTGCTTCTGG...TTTGAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAGCCAATTGGTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS CCA 90 bp AGAGCTGTGGCTGTAATCTTCGAGGCCCAATCCCAGAGCAGAATGTaGTGTTGGAGAAGGTGGAACTTCACTCTCGGCCCATCCGTCATT +
Preference number: 5 (lower is better)
Translates to: RAVAVIFEAQSQSRM*CWRRWNFTLGPSVI
Trigger: AATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGCCTCGAAGATTACAGCCACAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGCGCTTGGACCTGCTGTaGTCTTCAATGCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMRLDLL*SSMPRM
Trigger: CATCCGAGGCATTGAAGACAACAGCAGGTCCAAGCG...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCTGGCGGAAGACATCTaGAGCCTGAGCAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALLAEDI*SLSKGF
Trigger: AAAACCTTTGCTCAGGCTCAAGATGTCTTCCGCCAG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACTGGCGGAAGACATCTaGAGCCTGAGCAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLLAEDI*SLSKGF
Trigger: AAAACCTTTGCTCAGGCTCAAGATGTCTTCCGCCAG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTCCATAGCTTCGTGGTaGGACTTTCCCAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: SSEAMVSSSLSPSADGYCSIASW*DFPKRD
Trigger: ATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGA...GCAGTAACCATCTGCACTCGGGGACAGCGAGGAGCTGACCATGGCCTCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCGGCCCATCCGTCATaGGGCAGCAATAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSAHPS*GSNRPF
Trigger: GAAAGGTCTATTGCTGCCCAATGACGGATGGGCCGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCAC +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSEQNVV*EKVELH
Trigger: GTGAAGTTCCACCTTCTCCAACACCACATTCTGCTC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGGAAGGCGGAACGTCTaGTCGAAAGGGTCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMGRRNV*SKGSFV
Trigger: CACAAAGGACCCTTTCGACAAGACGTTCCGCCTTCC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp GATTCAGGCTGCCTGGCCGGTGTCACAGATCTGAAGTTGATGTGCTaGTCTGGAAAATATACTGCTGAATCCACCCCAGAGCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: DSGCLAGVTDLKLMC*SGKYTAESTPELWL
Trigger: CAGCCACAGCTCTGGGGTGGATTCAGCAGTATATTTTCCAGATCAGCACATCAACTTCAGATCTGTGACACCGGCCAGGCAGCCTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GAATTCTCAGGCTATCTGAGAGGATTATTCACAATTACAGCTCTTCAAAGCAACCGCAGCTGGCCCTCCTaGCAGGGCACCACGATGCCC +
Preference number: 5 (lower is better)
Translates to: EFSGYLRGLFTITALQSNRSWPS*QGTTMP
Trigger: GGGCATCGTGGTGCCCTGCAAGGAGGGCCAGCTGCG...GTTGCTTTGAAGAGCTGTAATTGTGAATAATCCTCTCAGATAGCCTGAGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCCAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTACACTTGGAGATTTCATaGCCTGGCGGAAGACATCTT +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLHLEIS*PGGRHL
Trigger: AAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTG...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGGCGGCCATCTTTTATaGCTGCTCCCTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLGGHLL*LLPLVK
Trigger: TTTTACCAAAGGGAGCAGCAATAAAAGATGGCCGCC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRAVSPC*VLLSMA
Trigger: GGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTACCTTTCTGTTTGTCTaGTGGACTGCAAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALTFLFV*WTASAK
Trigger: CTTGGCACTTGCAGTCCACAAGACAAACAGAAAGGT...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCACTGTCCTTTGCCAATaGGAGGCCTTGGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESTVLCQ*EALALP
Trigger: GGGCAGGGCCAAGGCCTCCAATTGGCAAAGGACAGT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTCCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAA +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLPSGCM*IGFGAQ
Trigger: TTGAGCTCCAAACCCAATCAACATACATCCACTTGG...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTCTGTGTTTCTCTCCCTaGTGGAAGTCTCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALLCFSP*WKSQFS
Trigger: GGAGAATTGAGACTTCCACAAGGGAGAGAAACACAG...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRSFPAK*AGTGSA
Trigger: AGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGA...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAACGCTTGGACCTGCTGTaGTCTTCAATGCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKRLDLL*SSMPRM
Trigger: CATCCGAGGCATTGAAGACAACAGCAGGTCCAAGCG...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTCCATAGCTTCGTGGTaGGACTTTCCCAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSSIASW*DFPKRD
Trigger: ATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATGTCGAAAGGGTCCTTaGTGCTGGGGAGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGECRKGP*CWGAGG
Trigger: CCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTGTCGAAAGGGTCCTTaGTGCTGGGGAGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRCRKGP*CWGAGG
Trigger: CCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGGAAGGCGGAACGTCTaGTCGAAAGGGTCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKGRRNV*SKGSFV
Trigger: CACAAAGGACCCTTTCGACAAGACGTTCCGCCTTCC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLCLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTATGAGCCTCCTAACATaGTTAGGTGGCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLMSLLT*LGGFSS
Trigger: TGAAGAAAAGCCACCTAACAATGTTAGGAGGCTCAT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp GTTGCAGGGAAGCTGATGCATCTGTTTCAGGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTCCCGATTTTCCATGGACAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: VAGKLMHLFQDYRFL*DLLSLVPIFHGQEA
Trigger: CGCCTCCTGTCCATGGAAAATCGGGACTAAAGACAGCAAATCTCACAGGAACCGATAGTCCTGAAACAGATGCATCAGCTTCCCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp GAGCTCTTATCAGACAGACCGTCCGATTTTTGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGCACAAGGTCCATGCTCTTCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ELLSDRPSDFCPANE*TLLSSGTRSMLFEA
Trigger: AGCCTCGAAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGACGGTCTGTCTGATAAGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351153.5
ENST00000614500.3
CDS CCA 90 bp ATACTGTTCACGGTTTTGTGGAGGAAGCACGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCGGAAGACATCTTGAGCCTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: ILFTVLWRKHVEEHT*RFHCLAEDILSLSK
Trigger: TTTGCTCAGGCTCAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCCTTGTGGAGTGGTTCTaGTTCTTCAAACACAGCAAT +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSLVEWF*FFKHSN
Trigger: ATTGCTGTGTTTGAAGAACAAGAACCACTCCACAAG...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCACAGGAGGCGGCACTTaGGTTTTCAAAACGCCATCA +
Preference number: 5 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSTGGGT*VFKTPS
Trigger: TGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTGT...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFAVSPC*VLLSMA
Trigger: GGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACCTTCAAAGCGGAGGTaGTGTGCATTCCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPPSKRR*CAFPSG
Trigger: TCCAGATGGGAATGCACACAACCTCCGCTTTGAAGG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCCATCAGGATCCACGGGTGACAGTCGGTCTCAGAACCCCTACTATGCTCTTTCCATAATTAGTTGTTaGTGTGTTCCGTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: SPSGSTGDSRSQNPYYALSIISC*CVPLPL
Trigger: GAGTGGCAACGGAACACACAAACAACTAATTATGGA...AAGAGCATAGTAGGGGTTCTGAGACCGACTGTCACCCGTGGATCCTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTGTGTGCAGGAGGTATaGCACACTCTGGTGGCAACG +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFCVQEV*HTLVAT
Trigger: CGTTGCCACCAGAGTGTGCAATACCTCCTGCACACA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCCAAGGAGACACCGGATaGAGTTTTCCCAAGGCCATA +
Preference number: 5 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSQGDTG*SFPKAI
Trigger: TATGGCCTTGGGAAAACTCAATCCGGTGTCTCCTTG...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCTGTGTTTCTCTCCCTaGTGGAAGTCTCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRLCFSP*WKSQFS
Trigger: GGAGAATTGAGACTTCCACAAGGGAGAGAAACACAG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAGACCAGTCTTTCTGTaGCTCGTAGACTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRRPVFL*LVDSES
Trigger: GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPSFPAK*AGTGSA
Trigger: AGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATCGTTTCCAGCTAAGTaGGCAGGAACTGGGAGTGCT +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKSFPAK*AGTGSA
Trigger: AGCACTCCCAGTTCCTGCCAACTTAGCTGGAAACGA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCAGTGAAATTCCTTGCTTaGCCACTTATTAGCTATGTG +
Preference number: 5 (lower is better)
Translates to: AATSVSKASGLCRSAGFPVKFLA*PLISYV
Trigger: CACATAGCTAATAAGTGGCAAAGCAAGGAATTTCAC...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS TCA 90 bp AATCACCAACTGGATCATCCCTCGGATGTTTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCATAGCTTCGTGGTTGGACTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: NHQLDHPSDVSLHGH*PPKCFHSFVVGLSQ
Trigger: TTGGGAAAGTCCAACCACGAAGCTATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGAAACATCCGAGGGATGATCCAGTTGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp AAATGGTCCAGCTCGAGGGGGAGATGGAGATCTAAAGACATTTGCTaGTGTGCATGGTTCCCGAAAGTGGTTCACTCTGGCATAATTGGG +
Preference number: 5 (lower is better)
Translates to: KWSSSRGRWRSKDIC*CAWFPKVVHSGIIG
Trigger: CCCAATTATGCCAGAGTGAACCACTTTCGGGAACCATGCACATCAGCAAATGTCTTTAGATCTCCATCTCCCCCTCGAGCTGGACCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS GCA 90 bp AGACAGTGTCCTGTCATCACTGTAACTTTCCCCAAAAAGCTCCTCTaGCTCTGCAGAAAGAGAACGAGCACAGAATTGAGAGCCGTATGC +
Preference number: 5 (lower is better)
Translates to: RQCPVITVTFPKKLL*LCRKRTSTELRAVC
Trigger: GCATACGGCTCTCAATTCTGTGCTCGTTCTCTTTCTGCAGAGGCAGAGGAGCTTTTTGGGGAAAGTTACAGTGATGACAGGACACTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS-3UTR CAA 90 bp GCGGCCACTTCTGTCTCAAAAGCATCTGGGCTCTGCCGATCTGCAGGGTTTCCAAACACAGCAATCAGCTaGTCTTTATCTTCAACAACA +
Preference number: 5 (lower is better)
Translates to: AATSVSKASGLCRSAGFPNTAIS*SLSSTT
Trigger: TGTTGTTGAAGATAAAGACAAGCTGATTGCTGTGTT...TGGAAACCCTGCAGATCGGCAGAGCCCAGATGCTTTTGAGACAGAAGTGGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACTGGGGCTCTCAATCTaGTGGAGTGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPLGLSI*WSGSCS
Trigger: AGAACAAGAACCACTCCACAAGATTGAGAGCCCCAG...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCTGGGGCTCTCAATCTaGTGGAGTGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLLGLSI*WSGSCS
Trigger: AGAACAAGAACCACTCCACAAGATTGAGAGCCCCAG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTAAATCTCCACTGTTCTaGTCATATCACTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLKSPLF*SYHSMC
Trigger: ACACATTGAGTGATATGACAAGAACAGTGGAGATTT...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCGCTTGGACCTGCTGTaGTCTTCAATGCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVRLDLL*SSMPRM
Trigger: CATCCGAGGCATTGAAGACAACAGCAGGTCCAAGCG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVRGGAH*EISLPG
Trigger: GCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAACAGGAGGCGGCACTTaGGTTTTCAAAACGCCATCA +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKTGGGT*VFKTPS
Trigger: TGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTGT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCGGCGGCCATCTTTTATaGCTGCTCCCTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSGGHLL*LLPLVK
Trigger: TTTTACCAAAGGGAGCAGCAATAAAAGATGGCCGCC...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCAGAAAATGTCCTTCTaGGCGGGCAATGACCAGCGA +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFQKMSF*AGNDQR
Trigger: TCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCTG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRGGYSI*TVLKAW
Trigger: CCATGCTTTGAGAACTGTCAAAATGCTGTAACCACC...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTTCCTTGACTTTCAATTaGCCCTTTTCCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLSLTFN*PFSFFF
Trigger: GAAGAAAAAGGAAAAGGGCAAATTGAAAGTCAAGGA...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CGCCAGTCTCAGAGGGGGATGTCCACGTGTCTGCACATCAGCACAGGTTATCTAGTTGGACCAAAATCTTaGCTTGGAGATTCCGATTTT +
Preference number: 5 (lower is better)
Translates to: RQSQRGMSTCLHISTGYLVGPKS*LGDSDF
Trigger: AAAATCGGAATCTCCAAGCAAAGATTTTGGTCCAAC...TAGATAACCTGTGCTGATGTGCAGACACGTGGACATCCCCCTCTGAGACTGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACAAGGAGACACCGGATaGAGTTTTCCCAAGGCCATA +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPQGDTG*SFPKAI
Trigger: TATGGCCTTGGGAAAACTCAATCCGGTGTCTCCTTG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCCTCGCTGTCCCCGAGTGCAGATGGTTACTGCTTGGCACTGAGTCTGGACTTGAATTTTATGAATCTTaGGAGGGGACAATGAGTCAT +
Preference number: 5 (lower is better)
Translates to: LLAVPECRWLLLGTESGLEFYES*EGTMSH
Trigger: ATGACTCATTGTCCCCTCCAAAGATTCATAAAATTC...AAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGCACTCGGGGACAGCGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp TTCATCTGGCACAAGGTCCATGCTCTTCGAGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGGTGTCACAGATCTGAAGTTGATGTG +
Preference number: 5 (lower is better)
Translates to: FIWHKVHALRGFQIN*FRLPGRCHRSEVDV
Trigger: CACATCAACTTCAGATCTGTGACACCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCCTCGAAGAGCATGGACCTTGTGCCAGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp TGTCCTGTCATCACTGTAACTTTCCCCAAAAAGCTCCTCTGCCTCTaGAGAAAGAGAACGAGCACAGAATTGAGAGCCGTATGCATTTGG +
Preference number: 5 (lower is better)
Translates to: CPVITVTFPKKLLCL*RKRTSTELRAVCIW
Trigger: CCAAATGCATACGGCTCTCAATTCTGTGCTCGTTCTCTTTCTGCAGAGGCAGAGGAGCTTTTTGGGGAAAGTTACAGTGATGACAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CCA 90 bp ATGACTGACTTTTCATACTGTTCACGGTTTTGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGATTTCATTGCCTGGCGGAAGACATCT +
Preference number: 5 (lower is better)
Translates to: MTDFSYCSRFCGGST*RSTLGDFIAWRKTS
Trigger: AGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAGTATGAAAAGTCAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GAATTCTCAGGCTATCTGAGAGGATTATTCACAATTACAGCTCTTCAAAGCAACCAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: EFSGYLRGLFTITALQSNQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...GTTGCTTTGAAGAGCTGTAATTGTGAATAATCCTCTCAGATAGCCTGAGAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAAATAGTCCCTCCCGCTaGGACCTGCTGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVNSPSR*DLLLSS
Trigger: TGAAGACAACAGCAGGTCCAAGCGGGAGGGACTATT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCCTGGCGGAAGACATCTaGAGCCTGAGCAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFLAEDI*SLSKGF
Trigger: AAAACCTTTGCTCAGGCTCAAGATGTCTTCCGCCAG...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKRGGAH*EISLPG
Trigger: GCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRRGGAH*EISLPG
Trigger: GCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCATACTGTTCACGGTTTaGTGGAGGAAGCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFILFTV*WRKHVE
Trigger: CTCCACGTGCTTCCTCCACAAAACCGTGAACAGTAT...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCACAGGAGGCGGCACTTaGGTTTTCAAAACGCCATCA +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESTGGGT*VFKTPS
Trigger: TGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTGT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCTGTCCTTCTTTGCATTTTTATaGCTGCCAAATCCCATGAGA +
Preference number: 5 (lower is better)
Translates to: LPSNTCWSSEAMVSSSLSFFAFL*LPNPMR
Trigger: TCTCATGGGATTTGGCAGCAATAAAAATGCAAAGAA...GGACAGCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTGGCGGCCATCTTTTATaGCTGCTCCCTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLGGHLL*LLPLVK
Trigger: TTTTACCAAAGGGAGCAGCAATAAAAGATGGCCGCC...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCCAGAAAATGTCCTTCTaGGCGGGCAATGACCAGCGA +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVQKMSF*AGNDQR
Trigger: TCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCTG...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCAC +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFEQNVV*EKVELH
Trigger: GTGAAGTTCCACCTTCTCCAACACCACATTCTGCTC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCACAATTCAGAGCTCCTaGGCCAGAGTGAGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESTIQSS*ARVRAL
Trigger: AAGAGCTCTCACTCTGGCCAAGGAGCTCTGAATTGT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTGTCGAAAGGGTCCTTaGTGCTGGGGAGCTGGCGGG +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFCRKGP*CWGAGG
Trigger: CCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGGAAGGCGGAACGTCTaGTCGAAAGGGTCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAGRRNV*SKGSFV
Trigger: CACAAAGGACCCTTTCGACAAGACGTTCCGCCTTCC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGAGGGCCGTGGGATGTaGAACCCTCTTAACCTGATC +
Preference number: 5 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAEGRGM*NPLNLI
Trigger: GATCAGGTTAAGAGGGTTCAACATCCCACGGCCCTC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKEALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCATGAGCCTCCTAACATaGTTAGGTGGCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRMSLLT*LGGFSS
Trigger: TGAAGAAAAGCCACCTAACAATGTTAGGAGGCTCAT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp CCAAAATCTTTGCTTGGAGATTCCGATTTTTGTCCAGCCAATGAGTaGACCTTGCTTTCATCTGGCACAAGGTCCATGCTCTTCGAGGCT +
Preference number: 5 (lower is better)
Translates to: PKSLLGDSDFCPANE*TLLSSGTRSMLFEA
Trigger: AGCCTCGAAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGAATCTCCAAGCAAAGATTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000349953.7
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000622699.2
CDS CCA 90 bp TTTCCCTCCATGGACATTGACCGCCTAAGTGTTTCCATAGCTTCGTaGTTGGACTTTCCCAAAAGAGATTCCCCATTAACTGCAATCAGC +
Preference number: 5 (lower is better)
Translates to: FPSMDIDRLSVSIAS*LDFPKRDSPLTAIS
Trigger: GCTGATTGCAGTTAATGGGGAATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISLKCGQ*GGHFCL
Trigger: GAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCAGGGTGTGAAGCGCTaGGCTGGGTATCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFQGVKR*AGYQQV
Trigger: CACCTGCTGATACCCAGCCAAGCGCTTCACACCCTG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCATACTGTTCACGGTTTaGTGGAGGAAGCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVILFTV*WRKHVE
Trigger: CTCCACGTGCTTCCTCCACAAAACCGTGAACAGTAT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTTCCATAGCTTCGTGGTaGGACTTTCCCAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLSIASW*DFPKRD
Trigger: ATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGA...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCACCTTTCTGTTTGTCTaGTGGACTGCAAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFTFLFV*WTASAK
Trigger: CTTGGCACTTGCAGTCCACAAGACAAACAGAAAGGT...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCACCTTTCTGTTTGTCTaGTGGACTGCAAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESTFLFV*WTASAK
Trigger: CTTGGCACTTGCAGTCCACAAGACAAACAGAAAGGT...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCACAATTCAGAGCTCCTaGGCCAGAGTGAGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVTIQSS*ARVRAL
Trigger: AAGAGCTCTCACTCTGGCCAAGGAGCTCTGAATTGT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTTGCGCTTTTTCTCCTaGACTTTCAATTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMLRFFS*TFNLPF
Trigger: AAAGGGCAAATTGAAAGTCAAGGAGAAAAAGCGCAA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACATACTCAGATGGCCTaGCTCTTCCTTCGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVHTQMA*LFLRRL
Trigger: AAGACGACGAAGGAAGAGCAAGGCCATCTGAGTATG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVTQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAGGTTAGAAGAGTCTTaGGGGTTGGTTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKRLEES*GLVHFL
Trigger: CAGGAAATGAACCAACCCCAAAGACTCTTCTAACCT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AGAACTACAAGCAGCAGGATACCTACTGGAACAACCAGTTTCAGACTCTGGCCACGTGATATTGGGAGCTaGAAAATGTACACCACTCAC +
Preference number: 5 (lower is better)
Translates to: RTTSSRIPTGTTSFRLWPRDIGS*KMYTTH
Trigger: GTGAGTGGTGTACATTTTCAAGCTCCCAATATCACG...TGGCCAGAGTCTGAAACTGGTTGTTCCAGTAGGTATCCTGCTGCTTGTAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCTGGGGCTCTCAATCTaGTGGAGTGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LELLIVAWLDGASVCHKYLGLSI*WSGSCS
Trigger: AGAACAAGAACCACTCCACAAGATTGAGAGCCCCAG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTTAAAACTGCAAAGTCCCACTTAACCTATGGGTACAGCACTTTGATCTTTCATCTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: FKTAKSHLTYGYSTLIFHLKCGQ*GGHFCL
Trigger: GAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG...ATGAAAGATCAAAGTGCTGTACCCATAGGTTAAGTGGGACTTTGCAGTTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTTAAATGCGGCCAGTaGGGCGGCCACTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLKCGQ*GGHFCL
Trigger: GAGACAGAAGTGGCCGCCCAACTGGCCGCATTTAAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGAAATCTCCACTGTTCTaGTCATATCACTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMKSPLF*SYHSMC
Trigger: ACACATTGAGTGATATGACAAGAACAGTGGAGATTT...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCAAATCTCCACTGTTCTaGTCATATCACTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRKSPLF*SYHSMC
Trigger: ACACATTGAGTGATATGACAAGAACAGTGGAGATTT...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTACACTTGGAGATTTCATaGCCTGGCGGAAGACATCTT +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVHLEIS*PGGRHL
Trigger: AAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTG...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGACAGGAGGCGGCACTTaGGTTTTCAAAACGCCATCA +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRTGGGT*VFKTPS
Trigger: TGATGGCGTTTTGAAAACCAAAGTGCCGCCTCCTGT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFGGYSI*TVLKAW
Trigger: CCATGCTTTGAGAACTGTCAAAATGCTGTAACCACC...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCAC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFREQNVV*EKVELH
Trigger: GTGAAGTTCCACCTTCTCCAACACCACATTCTGCTC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGTCCTTGACTTTCAATTaGCCCTTTTCCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMSLTFN*PFSFFF
Trigger: GAAGAAAAAGGAAAAGGGCAAATTGAAAGTCAAGGA...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCTCTCATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTTGCGCTTTTTCTCCTaGACTTTCAATTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: LSHSLPSNTCWSSEAMVSLRFFS*TFNLPF
Trigger: AAAGGGCAAATTGAAAGTCAAGGAGAAAAAGCGCAA...GCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAATGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCATACTCAGATGGCCTaGCTCTTCCTTCGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: LELLIVAWLDGASVCHKYHTQMA*LFLRRL
Trigger: AAGACGACGAAGGAAGAGCAAGGCCATCTGAGTATG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGCACTGAGTCTGGACTaGGCATTTCCCAGGGCACTG +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFALSLD*AFPRAL
Trigger: CAGTGCCCTGGGAAATGCCAAGTCCAGACTCAGTGC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPCLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAA +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFPSGCM*IGFGAQ
Trigger: TTGAGCTCCAAACCCAATCAACATACATCCACTTGG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ACATCATTTCACGGCCTTCATGACCCAGCAGTCAGATCTGCAGCCAAGTGGATGGAATTTTATGAATCTTaGGAGGGGACAATGAGTCAT +
Preference number: 5 (lower is better)
Translates to: TSFHGLHDPAVRSAAKWMEFYES*EGTMSH
Trigger: ATGACTCATTGTCCCCTCCAAAGATTCATAAAATTC...CATCCACTTGGCTGCAGATCTGACTGCTGGGTCATGAAGGCCGTGAAATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAATGAGCCTCCTAACATaGTTAGGTGGCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKMSLLT*LGGFSS
Trigger: TGAAGAAAAGCCACCTAACAATGTTAGGAGGCTCAT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp ATTCACTTCCATCTAATACCTGCTGGTCATCAGAGGCCATGGTCAGCTCCTCGCCAATTTAACACCAATTaGAAGGCCATTGATTGTAGG +
Preference number: 5 (lower is better)
Translates to: IHFHLIPAGHQRPWSAPRQFNTN*KAIDCR
Trigger: CCTACAATCAATGGCCTTCAAATTGGTGTTAAATTG...GCGAGGAGCTGACCATGGCCTCTGATGACCAGCAGGTATTAGATGGAAGTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAAGACCAGTCTTTCTGTaGCTCGTAGACTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVRPVFL*LVDSES
Trigger: GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCAGACCAGTCTTTCTGTaGCTCGTAGACTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVRPVFL*LVDSES
Trigger: GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCT...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACTGGGGCTCTCAATCTaGTGGAGTGGTTCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKELGLSI*WSGSCS
Trigger: AGAACAAGAACCACTCCACAAGATTGAGAGCCCCAG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATCACTTGGAGATTTCATaGCCTGGCGGAAGACATCTT +
Preference number: 5 (lower is better)
Translates to: LELLIVAWLDGASVCHKYHLEIS*PGGRHL
Trigger: AAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTG...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGGCGGCCATCTTTTATaGCTGCTCCCTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRGGHLL*LLPLVK
Trigger: TTTTACCAAAGGGAGCAGCAATAAAAGATGGCCGCC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCAGAAAATGTCCTTCTaGGCGGGCAATGACCAGCGA +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISQKMSF*AGNDQR
Trigger: TCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCTG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTCAGAAAATGTCCTTCTaGGCGGGCAATGACCAGCGA +
Preference number: 5 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFQKMSF*AGNDQR
Trigger: TCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCTG...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACCTTTCTGTTTGTCTaGTGGACTGCAAGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTFLFV*WTASAK
Trigger: CTTGGCACTTGCAGTCCACAAGACAAACAGAAAGGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCAC +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKEEQNVV*EKVELH
Trigger: GTGAAGTTCCACCTTCTCCAACACCACATTCTGCTC...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATTGCGCTTTTTCTCCTaGACTTTCAATTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLRFFS*TFNLPF
Trigger: AAAGGGCAAATTGAAAGTCAAGGAGAAAAAGCGCAA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAATTTTCAAACCCAGAGTaGGACCAAAATCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKFSNPE*DQNLCL
Trigger: CAAGCAAAGATTTTGGTCCAACTCTGGGTTTGAAAA...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCTCCATAATTAGTTGTTaGTGTGTTCCGTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFSIISC*CVPLPL
Trigger: GAGTGGCAACGGAACACACAAACAACTAATTATGGA...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTGCAGATGGTTACTGCTaGGCACTGAGTCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISADGYC*ALSLDL
Trigger: CAAGTCCAGACTCAGTGCCAAGCAGTAACCATCTGC...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCACTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLLIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTGCTTGTGTTCTCATTaGGGCCAGCTTGTATGTTTT +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFCLCSH*GQLVCF
Trigger: AAAACATACAAGCTGGCCCAAATGAGAACACAAGCA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCCAACTACATTTTAGCCCTCAAGTGGGAACCTTAGAGACCCCAGTTAAAGTAACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 5 (lower is better)
Translates to: SQLHFSPQVGTLETPVKVTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...TACTTTAACTGGGGTCTCTAAGGTTCCCACTTGAGGGCTAAAATGTAGTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTCAGAACCCCTACTATGCTCTTAAGATCTTTACTTGGTGCCATCCTGTGGGAGGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 5 (lower is better)
Translates to: LRTPTMLLRSLLGAILWEAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...CTCCCACAGGATGGCACCAAGTAAAGATCTTAAGAGCATAGTAGGGGTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCAGCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 5 (lower is better)
Translates to: AAKWMYVDWVWSSMCHSLKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...AAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAAACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKETQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCTGTGTTTCTCTCCCTaGTGGAAGTCTCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRLCFSP*WKSQFS
Trigger: GGAGAATTGAGACTTCCACAAGGGAGAGAAACACAG...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAACTGTGTTTCTCTCCCTaGTGGAAGTCTCAATTCTCC +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKLCFSP*WKSQFS
Trigger: GGAGAATTGAGACTTCCACAAGGGAGAGAAACACAG...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 90 bp ATACCTCAGCATGGCGCCGAAGCCCTTCTTCTTTATTTTCCTTTCTaGATCTTCATTCTCCTCTTTGCGCTTTTTCTCCTTGACTTTCAA +
Preference number: 5 (lower is better)
Translates to: IPQHGAEALLLYFPF*IFILLFALFLLDFQ
Trigger: TTGAAAGTCAAGGAGAAAAAGCGCAAAGAGGAGAATGAAGATCCAGAAAGGAAAATAAAGAAGAAGGGCTTCGGCGCCATGCTGAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS-3UTR CAA 90 bp TGGGGAGGCTGTGTTTCTCTCCCTTGTGGAAGTCTCAATTCTCCTGCATCTAAAAAATCTCCACTGTTCTaGTCATATCACTCAATGTGT +
Preference number: 5 (lower is better)
Translates to: WGGCVSLPCGSLNSPASKKSPLF*SYHSMC
Trigger: ACACATTGAGTGATATGACAAGAACAGTGGAGATTT...TTTAGATGCAGGAGAATTGAGACTTCCACAAGGGAGAGAAACACAGCCTCCCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTAATAGTCCCTCCCGCTaGGACCTGCTGTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFNSPSR*DLLLSS
Trigger: TGAAGACAACAGCAGGTCCAAGCGGGAGGGACTATT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCATTCTTTGCATTTTTATaGCTGCCAAATCCCATGAGA +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPFFAFL*LPNPMR
Trigger: TCTCATGGGATTTGGCAGCAATAAAAATGCAAAGAA...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAATCCATAGCTTCGTGGTaGGACTTTCCCAAAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGESIASW*DFPKRD
Trigger: ATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGA...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKGGYSI*TVLKAW
Trigger: CCATGCTTTGAGAACTGTCAAAATGCTGTAACCACC...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCCTTCAAAGCGGAGGTaGTGTGCATTCCCATCTGGA +
Preference number: 5 (lower is better)
Translates to: CISSTDLILLGNGIMARVPSKRR*CAFPSG
Trigger: TCCAGATGGGAATGCACACAACCTCCGCTTTGAAGG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTTTTCAAACCCAGAGTaGGACCAAAATCTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESFSNPE*DQNLCL
Trigger: CAAGCAAAGATTTTGGTCCAACTCTGGGTTTGAAAA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGCCACTCTCACTGATTaGAACAACTCTGAAAGCGTT +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRATLTD*NNSESV
Trigger: AACGCTTTCAGAGTTGTTCAAATCAGTGAGAGTGGC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAACCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAA +
Preference number: 5 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEPSGCM*IGFGAQ
Trigger: TTGAGCTCCAAACCCAATCAACATACATCCACTTGG...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GCCAAGTGGATGTATGTTGATTGGGTTTGGAGCTCAATGTGCCACTCTCTTCCAGAATTTTATGAATCTTaGGAGGGGACAATGAGTCAT +
Preference number: 5 (lower is better)
Translates to: AKWMYVDWVWSSMCHSLPEFYES*EGTMSH
Trigger: ATGACTCATTGTCCCCTCCAAAGATTCATAAAATTC...TGGAAGAGAGTGGCACATTGAGCTCCAAACCCAATCAACATACATCCACTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAAAGGTTAGAAGAGTCTTaGGGGTTGGTTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKRLEES*GLVHFL
Trigger: CAGGAAATGAACCAACCCCAAAGACTCTTCTAACCT...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp TCTGGCATAATTGGGGTCCATTTCATCATCATCCATATCATACACTaGTCCAATTGCACCAGTAGCATAATCAAGAAGACCTCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: SGIIGVHFIIIHIIH*SNCTSSIIKKTSCL
Trigger: CAGGCAAGAGGTCTTCTTGATTATGCTACTGGTGCAATTGGATCAGTGTATGATATGGATGATGATGAAATGGACCCCAATTATGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS GCA 90 bp AATAGACCTTTCTGTTTGTCTTGTGGACTGCAAGTGCCAAGTGGATaGAGGATACTATTATCATTTCGCCTAGAGGTGGTTACAGCATTT +
Preference number: 5 (lower is better)
Translates to: NRPFCLSCGLQVPSG*RILLSFRLEVVTAF
Trigger: AAATGCTGTAACCACCTCTAGGCGAAATGATAATAGTATCCTGCATCCACTTGGCACTTGCAGTCCACAAGACAAACAGAAAGGTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 90 bp GCTGTGAGACTGAACAAAGTTTTACATGGAGAAACAGTCCACAATTaGTTCACTTCCTCAAAGCCCACATACAGCTTCCTCTTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: AVRLNKVLHGETVHN*FTSSKPTYSFLFFV
Trigger: AACAAAGAAGAGGAAGCTGTATGTGGGCTTTGAGGAAGTGAAGCAATTGTGGACTGTTTCTCCATGTAAAACTTTGTTCAGTCTCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465890.1
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTCTGGCGGAAGACATCTaGAGCCTGAGCAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFLAEDI*SLSKGF
Trigger: AAAACCTTTGCTCAGGCTCAAGATGTCTTCCGCCAG...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGATACTGTTCACGGTTTaGTGGAGGAAGCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: CISSTDLILLGNGIMARVILFTV*WRKHVE
Trigger: CTCCACGTGCTTCCTCCACAAAACCGTGAACAGTAT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AATTGGGAGCTATTTCCTGCTCCCAGGCACATTACTGATTATAGCCTGGTCTTCTTCTTTGCATTTTTATaGCTGCCAAATCCCATGAGA +
Preference number: 5 (lower is better)
Translates to: NWELFPAPRHITDYSLVFFFAFL*LPNPMR
Trigger: TCTCATGGGATTTGGCAGCAATAAAAATGCAAAGAA...GAAGACCAGGCTATAATCAGTAATGTGCCTGGGAGCAGGAAATAGCTCCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TCCTGCCTAATTGCACTAAGACCAGTCTTTCTGTTGCTCGTAGACTCAGAAAGCTTCTTTGCATTTTTATaGCTGCCAAATCCCATGAGA +
Preference number: 5 (lower is better)
Translates to: SCLIALRPVFLLLVDSESFFAFL*LPNPMR
Trigger: TCTCATGGGATTTGGCAGCAATAAAAATGCAAAGAA...GCTTTCTGAGTCTACGAGCAACAGAAAGACTGGTCTTAGTGCAATTAGGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGACAATTCAGAGCTCCTaGGCCAGAGTGAGAGCTCTT +
Preference number: 5 (lower is better)
Translates to: CISSTDLILLGNGIMARVTIQSS*ARVRAL
Trigger: AAGAGCTCTCACTCTGGCCAAGGAGCTCTGAATTGT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGCATACTCAGATGGCCTaGCTCTTCCTTCGTCGTCTT +
Preference number: 5 (lower is better)
Translates to: CISSTDLILLGNGIMARVHTQMA*LFLRRL
Trigger: AAGACGACGAAGGAAGAGCAAGGCCATCTGAGTATG...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CCTGGTCTTCTAAATACTCTAAAAGCCTGTTCCCCTAAATGCTGGGAAAGAGTCGACCAAAATCTTTGCTaGGAGATTCCGATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: PGLLNTLKACSPKCWERVDQNLC*EIPIFV
Trigger: GACAAAAATCGGAATCTCCAAGCAAAGATTTTGGTC...GACTCTTTCCCAGCATTTAGGGGAACAGGCTTTTAGAGTATTTAGAAGACCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp TGCTACAATGTTCCTCCAAAGAAAACGAATGCAGTGGTTACAGGTTTGGGGAAATCCATAATTAGTTGTTaGTGTGTTCCGTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: CYNVPPKKTNAVVTGLGKSIISC*CVPLPL
Trigger: GAGTGGCAACGGAACACACAAACAACTAATTATGGA...TTTCCCCAAACCTGTAACCACTGCATTCGTTTTCTTTGGAGGAACATTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCCGTTTCCCCCACTTTaGCATCAAACTCTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISPFPPL*HQTLQK
Trigger: TTTCTGGAGAGTTTGATGCAAAAGTGGGGGAAACGG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTACACAAAACCCAGCTTaGGAGCAGTTTACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFTQNPA*EQFTLS
Trigger: GCTCAGGGTAAACTGCTCCAAAGCTGGGTTTTGTGT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGAGCTGTTAATTGTTGCTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATATGAGCCTCCTAACATaGTTAGGTGGCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LELLIVAWLDGASVCHKYMSLLT*LGGFSS
Trigger: TGAAGAAAAGCCACCTAACAATGTTAGGAGGCTCAT...ATATTTGTGACAGACAGAGGCTCCATCAAGCCAAGCAACAATTAACAGCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AACACCAAGGAGGTCTTCAGGTTTAGAAAGGGCAAAGGTAGAGTAGACACCTTCCAATTTAACACCAATTaGAAGGCCATTGATTGTAGG +
Preference number: 5 (lower is better)
Translates to: NTKEVFRFRKGKGRVDTFQFNTN*KAIDCR
Trigger: CCTACAATCAATGGCCTTCAAATTGGTGTTAAATTG...GAAGGTGTCTACTCTACCTTTGCCCTTTCTAAACCTGAAGACCTCCTTGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 90 bp TCTACGAGATCCACATTGTTGATTTTTACAATACATTCATTTTCGTaGAATAGTCCCTCCCGCTTGGACCTGCTGTTGTCTTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: STRSTLLIFTIHSFS*NSPSRLDLLLSSMP
Trigger: AGGCATTGAAGACAACAGCAGGTCCAAGCGGGAGGGACTATTTCACGAAAATGAATGTATTGTAAAAATCAACAATGTGGATCTCGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGACCAAAATCTTTGCTaGGAGATTCCGATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRDQNLC*EIPIFV
Trigger: GACAAAAATCGGAATCTCCAAGCAAAGATTTTGGTC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGGTTGGACCAAAATCTTaGCTTGGAGATTCCGATTTT +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRVGPKS*LGDSDF
Trigger: AAAATCGGAATCTCCAAGCAAAGATTTTGGTCCAAC...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAGCAGTTGCATCCTTCTaGGTAGCAGAATACTATTTT +
Preference number: 5 (lower is better)
Translates to: WLDGASVCHKYNVSFFQAAVASF*VAEYYF
Trigger: AAAATAGTATTCTGCTACCAAGAAGGATGCAACTGC...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTACACGTCCCTCGTGTTATCATTTTCCTTAAGGTGTATTCAACTCGAGGGGAAAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 5 (lower is better)
Translates to: LHVPRVIIFLKVYSTRGEKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...TTCCCCTCGAGTTGAATACACCTTAAGGAAAATGATAACACGAGGGACGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGAAGGAATGTTCTGGCTaGGCTATGTTTAGTAGTCTA +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRKECSG*AMFSSL
Trigger: TAGACTACTAAACATAGCCAAGCCAGAACATTCCTT...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCCAAGTGGATGTATGTaGATTGGGTTTGGAGCTCAA +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISPSGCM*IGFGAQ
Trigger: TTGAGCTCCAAACCCAATCAACATACATCCACTTGG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGCAAACACAGCAATCAGCTaGTCTTTATCTTCAACAACA +
Preference number: 5 (lower is better)
Translates to: WLDGASVCHKYNVSFFQANTAIS*SLSSTT
Trigger: TGTTGTTGAAGATAAAGACAAGCTGATTGCTGTGTT...TGCCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGG +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFGGYSI*TVLKAW
Trigger: CCATGCTTTGAGAACTGTCAAAATGCTGTAACCACC...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp CTTGGCTTGATGGAGCCTCTGTCTGTCACAAATATAATGTTAGCTTCTTTCAGGTCCTTGACTTTCAATTaGCCCTTTTCCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGLMEPLSVTNIMLASFRSLTFN*PFSFFF
Trigger: GAAGAAAAAGGAAAAGGGCAAATTGAAAGTCAAGGA...CCTGAAAGAAGCTAACATTATATTTGTGACAGACAGAGGCTCCATCAAGCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAATTGCGCTTTTTCTCCTaGACTTTCAATTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKELRFFS*TFNLPF
Trigger: AAAGGGCAAATTGAAAGTCAAGGAGAAAAAGCGCAA...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTTCCATAATTAGTTGTTaGTGTGTTCCGTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFSIISC*CVPLPL
Trigger: GAGTGGCAACGGAACACACAAACAACTAATTATGGA...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TTCTTTCAGGCAGGATCAAATGGAGCGTGTGTTATACTTCAAGCAAGGAAAGAACTCATTTGGGCCAGCTaGTATGTTTTAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: FFQAGSNGACVILQARKELIWAS*YVLEVL
Trigger: TAAAACCTCTAAAACATACAAGCTGGCCCAAATGAG...TTCTTTCCTTGCTTGAAGTATAACACACGCTCCATTTGATCCTGCCTGAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTACCAGTGCTCAGGTTTaGCTGTCTTCCACATCTTTT +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFTSAQV*LSSTSF
Trigger: AAAAGATGTGGAAGACAGCAAAACCTGAGCACTGGT...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp TGTATTTCATCCACTGATTTGATATTGTTAGGAAACGGTATTATGGCAAGGGTGAGGTTAGAAGAGTCTTaGGGGTTGGTTCATTTCCTG +
Preference number: 5 (lower is better)
Translates to: CISSTDLILLGNGIMARVRLEES*GLVHFL
Trigger: CAGGAAATGAACCAACCCCAAAGACTCTTCTAACCT...CACCCTTGCCATAATACCGTTTCCTAACAATATCAAATCAGTGGATGAAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGACCAAAATCTTTGCTaGGAGATTCCGATTTTTGTC +
Preference number: 5 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFDQNLC*EIPIFV
Trigger: GACAAAAATCGGAATCTCCAAGCAAAGATTTTGGTC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000622699.2
CDS-3UTR CAA 90 bp AAAAGCTTATCAGTAACATGGAGAATTCCTAACACCAAGGAGGTCTTCAGGTTTGAATTTTATGAATCTTaGGAGGGGACAATGAGTCAT +
Preference number: 5 (lower is better)
Translates to: KSLSVTWRIPNTKEVFRFEFYES*EGTMSH
Trigger: ATGACTCATTGTCCCCTCCAAAGATTCATAAAATTC...AAACCTGAAGACCTCCTTGGTGTTAGGAATTCTCCATGTTACTGATAAGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTCTCAATTCTCCTGCATCTAAAAGTTTTCAATGGTCTGTCCTCTTTCATCTCTCAATTTAACACCAATTaGAAGGCCATTGATTGTAGG +
Preference number: 5 (lower is better)
Translates to: VSILLHLKVFNGLSSFISQFNTN*KAIDCR
Trigger: CCTACAATCAATGGCCTTCAAATTGGTGTTAAATTG...AGAGATGAAAGAGGACAGACCATTGAAAACTTTTAGATGCAGGAGAATTGAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS-3UTR CAA 90 bp GTAGTCTACAGTAGTTTGGTTAAAATATGGAACATAGTGAAGAGCTGCTGGTTTTCCTTGACTTTCAATTaGCCCTTTTCCTTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VVYSSLVKIWNIVKSCWFSLTFN*PFSFFF
Trigger: GAAGAAAAAGGAAAAGGGCAAATTGAAAGTCAAGGA...AAACCAGCAGCTCTTCACTATGTTCCATATTTTAACCAAACTACTGTAGACTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp CCCGGCGACCACGCCGGGCCGGGCCGAACAGGTGTCTaGCCCCGCGGGCGCAGCCCCCACTCTCGGAGGACG +
Preference number: 6 (lower is better)
Translates to: PGDHAGPGRTGV*PRGRSPHSRRT
Trigger: CGTCCTCCGAGAGTGGGGGCTGCGCCCGCGGGGTCAGACACCTGTTCGGCCCGGCCCGGCGTGGTCGCCGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406610.7
ENST00000415947.1
ENST00000462231.5
ENST00000471958.1
CDS GCA 72 bp CTCCTCCCGCTCCTACTCCTGCCCGGCCCAGGCGGCTaGTCCGCGCCCACCAAAGCGAAACTGCCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LLPLLLLPGPGG*SAPTKAKLPAL
Trigger: CAGGGCCGGCAGTTTCGCTTTGGTGGGCGCGGAGCAGCCGCCTGGGCCGGGCAGGAGTAGGAGCGGGAGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS GCA 72 bp ACCGGCTCCTCCTCCTCCTCCTCCCGCTCCTACTCCTaGCCGGCCCAGGCGGCTGCTCCGCGCCCACCAAAG +
Preference number: 6 (lower is better)
Translates to: TGSSSSSSRSYS*PAQAAAPRPPK
Trigger: CTTTGGTGGGCGCGGAGCAGCCGCCTGGGCCGGGCAGGAGTAGGAGCGGGAGGAGGAGGAGGAGGAGCCGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS GCA 72 bp CCCTTCTCCCGGGTCTTCAGGTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: PFSRVFRYRCSA*WVSSPTRSWPS
Trigger: GGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
CDS GCA 72 bp GCCGCGCTCACCTTCTCCCGGGTCTTCAGGTACCGCTaGAGCGCCTGCTGGGTGAGCTCGCCGACGCGCAGC +
Preference number: 6 (lower is better)
Translates to: AALTFSRVFRYR*SACWVSSPTRS
Trigger: GCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGTGAGCGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS GCA 72 bp GCCTTCTCCCGGGTCTTCAGGTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: AFSRVFRYRCSA*WVSSPTRSWPS
Trigger: GGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471958.1
CDS CCA 72 bp TGCAGCGCCTGCTGGGTGAGCTCGCCGACGCGCAGCTaGCCCTCCTTGCAGGGCACCACGATGCCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: CSACWVSSPTRS*PSLQGTTMPVL
Trigger: CAGGACGGGCATCGTGGTGCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000415947.1
ENST00000462231.5
ENST00000471958.1
CDS CCA 72 bp GTGGGCGGCGGCGGCGGCGGCGCACGGGGCCAGAGTTaGGAGGAAACTTTTGCGCCGGCTCCCAACTCCTCT +
Preference number: 6 (lower is better)
Translates to: VGGGGGGARGQS*EETFAPAPNSS
Trigger: AGAGGAGTTGGGAGCCGGCGCAAAAGTTTCCTCCCAACTCTGGCCCCGTGCGCCGCCGCCGCCGCCGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS CAA 72 bp AGTGGGCGGCGGCGGCGGCGGCGCACGGGGCCAGAGTaGGGAGGAAACTTTTGCGCCGGCTCCCAACTCCTC +
Preference number: 6 (lower is better)
Translates to: SGRRRRRRTGPE*GGNFCAGSQLL
Trigger: GAGGAGTTGGGAGCCGGCGCAAAAGTTTCCTCCCAACTCTGGCCCCGTGCGCCGCCGCCGCCGCCGCCCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406610.7
CDS GCA 72 bp ACCTTCTCCCGGGTCTTCAGGTACCGCTGCAGCGCCTaGTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TFSRVFRYRCSA*WVSSPTRSWPS
Trigger: GGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415947.1
CDS CAA 72 bp TGCTGGGTGAGCTCGCCGACGCGCAGCTGGCCCTCCTaGCAGGGCACCACGATGCCCGTCCTGCCGAAGCAC +
Preference number: 6 (lower is better)
Translates to: CWVSSPTRSWPS*QGTTMPVLPKH
Trigger: GTGCTTCGGCAGGACGGGCATCGTGGTGCCCTGCAAGGAGGGCCAGCTGCGCGTCGGCGAGCTCACCCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000415947.1
ENST00000462231.5
ENST00000471958.1
CDS GCA 72 bp AGATATCATGCCTTCTCCCGGGTCTTCAGGTACCGCTaGAGCGCCTGCTGGGTGAGCTCGCCGACGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RYHAFSRVFRYR*SACWVSSPTRS
Trigger: GCTGCGCGTCGGCGAGCTCACCCAGCAGGCGCTGCAGCGGTACCTGAAGACCCGGGAGAAGGCATGATATCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471958.1
CDS TCA 72 bp CAGCCTCGGCCTCGAACCATGTGCGGCCGGGGCCTGTaGAAGGGAAGGTCATTCTTCCTGACCTCGGCCACT +
Preference number: 6 (lower is better)
Translates to: QPRPRTMCGRGL*KGRSFFLTSAT
Trigger: AGTGGCCGAGGTCAGGAAGAATGACCTTCCCTTTCACAGGCCCCGGCCGCACATGGTTCGAGGCCGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000349953.7
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000465890.1
ENST00000613457.4
ENST00000622699.2
CDS GCA 72 bp GGGAATCCTGGGTTCGGTAAGGGTACTGGTCTGGGCTaGCCCCACGGGGCCCTGGTCTGCCTGTTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: GNPGFGKGTGLG*PHGALVCLFPD
Trigger: ATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTACCGAACCCAGGATTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp GACCGGGCTGGCCTCGGTGGCACTCAGCTATACGGCTaGAGTCATGGGGTTCTTCTGCCGGGAATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: DRAGLGGTQLYG*SHGVLLPGILG
Trigger: ACCCAGGATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp GGTACTGGTCTGGGCTGCCCCCACGGGGCCCTGGTCTaGCTGTTTCCTGATAGGCTGGCATTCTTTGGTGCT +
Preference number: 6 (lower is better)
Translates to: GTGLGCPHGALV*LFPDRLAFFGA
Trigger: AGCACCAAAGAATGCCAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 72 bp TGGCGGGCAATGACCAGCGATGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCCACAAGCTCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: WRAMTSDAVSPC*VLLSMATSSSW
Trigger: CCAGGAAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 90 bp TGTCCTTCTTGGCGGGCAATGACCAGCGATGCTGTCTCCCCCTGCTaGGTGCTCCTGAGCATGGCCACAAGCTCTTCCTGGGTTCGTCCG +
Preference number: 6 (lower is better)
Translates to: CPSWRAMTSDAVSPC*VLLSMATSSSWVRP
Trigger: CGGACGAACCCAGGAAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp TCTTGGCGGGCAATGACCAGCGATGCTGTCTCCCCCTaGTTGGTGCTCCTGAGCATGGCCACAAGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SWRAMTSDAVSP*LVLLSMATSSS
Trigger: GGAAGAGCTTGTGGCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCCCGCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp GGGAAGCTCCCTTTCCTTGTAGAGCCCCCGAGGTGCTaGTGGCAGATAGTCTACAGGATCTGCGGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: GKLPFLVEPPRC*WQIVYRICGSS
Trigger: GGAGGACCCGCAGATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTACAAGGAAAGGGAGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp GTAAGGGTACTGGTCTGGGCTGCCCCCACGGGGCCCTaGTCTGCCTGTTTCCTGATAGGCTGGCATTCTTTG +
Preference number: 6 (lower is better)
Translates to: VRVLVWAAPTGP*SACFLIGWHSL
Trigger: CAAAGAATGCCAGCCTATCAGGAAACAGGCAGACCAGGGCCCCGTGGGGGCAGCCCAGACCAGTACCCTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp AACGTCTTGTCGAAAGGGTCCTTTGTGCTGGGGAGCTaGCGGGGGTGGGTAGTGCTGAGGATACCGGAGATC +
Preference number: 6 (lower is better)
Translates to: NVLSKGSFVLGS*RGWVVLRIPEI
Trigger: GATCTCCGGTATCCTCAGCACTACCCACCCCCGCCAGCTCCCCAGCACAAAGGACCCTTTCGACAAGACGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp TGGCCTCGGTGGCACTCAGCTATACGGCTGCAGTCATaGGGTTCTTCTGCCGGGAATCCTGGGTTCGGTAAG +
Preference number: 6 (lower is better)
Translates to: WPRWHSAIRLQS*GSSAGNPGFGK
Trigger: CTTACCGAACCCAGGATTCCCGGCAGAAGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp GTAGACACCTTCCTTTCTGGACCGGGCTGGCCTCGGTaGCACTCAGCTATACGGCTGCAGTCATGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: VDTFLSGPGWPR*HSAIRLQSWGS
Trigger: AGAACCCCATGACTGCAGCCGTATAGCTGAGTGCCACCGAGGCCAGCCCGGTCCAGAAAGGAAGGTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 90 bp CTGGGTAAGGATGCGTACTGCCTCTCCATCCCTTCAAAGCGGAGGTaGTGTGCATTCCCATCTGGACCCCTTCCAGGCACCCAGAGTAGG +
Preference number: 6 (lower is better)
Translates to: LGKDAYCLSIPSKRR*CAFPSGPLPGTQSR
Trigger: CCTACTCTGGGTGCCTGGAAGGGGTCCAGATGGGAATGCACACAACCTCCGCTTTGAAGGGATGGAGAGGCAGTACGCATCCTTACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp CAGAAAATGTCCTTCTTGGCGGGCAATGACCAGCGATaGTGTCTCCCCCTGCTTGGTGCTCCTGAGCATGGC +
Preference number: 6 (lower is better)
Translates to: QKMSFLAGNDQR*CLPLLGAPEHG
Trigger: GCCATGCTCAGGAGCACCAAGCAGGGGGAGACAGCATCGCTGGTCATTGCCCGCCAAGAAGGACATTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp ATAGGGAAGCTCCCTTTCCTTGTAGAGCCCCCGAGGTaGTGCTGGCAGATAGTCTACAGGATCTGCGGGTCC +
Preference number: 6 (lower is better)
Translates to: IGKLPFLVEPPR*CWQIVYRICGS
Trigger: GGACCCGCAGATCCTGTAGACTATCTGCCAGCAGCACCTCGGGGGCTCTACAAGGAAAGGGAGCTTCCCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 72 bp GATGCGTACTGCCTCTCCATCCCTTCAAAGCGGAGGTaGTGTGCATTCCCATCTGGACCCCTTCCAGGCACC +
Preference number: 6 (lower is better)
Translates to: DAYCLSIPSKRR*CAFPSGPLPGT
Trigger: GGTGCCTGGAAGGGGTCCAGATGGGAATGCACACAACCTCCGCTTTGAAGGGATGGAGAGGCAGTACGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp GCCCAATCCCAGAGCAGAATGTGGTGTTGGAGAAGGTaGAACTTCACTCTCGGCCCATCCGTCATTGGGCAG +
Preference number: 6 (lower is better)
Translates to: AQSQSRMWCWRR*NFTLGPSVIGQ
Trigger: CTGCCCAATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp TCCACCCGTAGGACGGCCACTGTCAGCTGGAACCAGTaGATGGTATGGCTTGTTGACCTTGGCATAGAGACC +
Preference number: 6 (lower is better)
Translates to: STRRTATVSWNQ*MVWLVDLGIET
Trigger: GGTCTCTATGCCAAGGTCAACAAGCCATACCATCCACTGGTTCCAGCTGACAGTGGCCGTCCTACGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS TCA 72 bp CTGTTGAGCTGGCCAAGACTCAGCAGATTTGCCCTGTaGTTGAGGGCTCTCTGCCTAATCCTGCTTCCTCCC +
Preference number: 6 (lower is better)
Translates to: LLSWPRLSRFAL*LRALCLILLPP
Trigger: GGGAGGAAGCAGGATTAGGCAGAGAGCCCTCAATCACAGGGCAAATCTGCTGAGTCTTGGCCAGCTCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494482.1
CDS TCA 72 bp GGGTGCAATAGGACCTGGCTGTTTTCTGCCCAGTGTTaGGCTCCTAGAACAGGGGATCTTTGGTCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: GCNRTWLFSAQC*APRTGDLWSGA
Trigger: AGCTCCCGACCAAAGATCCCCTGTTCTAGGAGCTCAACACTGGGCAGAAAACAGCCAGGTCCTATTGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494482.1
CDS GCA 72 bp GGAGCTCCTGTTGAGCTGGCCAAGACTCAGCAGATTTaGCCTGTGATTGAGGGCTCTCTGCCTAATCCTGCT +
Preference number: 6 (lower is better)
Translates to: GAPVELAKTQQI*PVIEGSLPNPA
Trigger: AGCAGGATTAGGCAGAGAGCCCTCAATCACAGGGCAAATCTGCTGAGTCTTGGCCAGCTCAACAGGAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494482.1
CDS CCA 72 bp ATCTTCGAGGCCCAATCCCAGAGCAGAATGTGGTGTTaGAGAAGGTGGAACTTCACTCTCGGCCCATCCGTC +
Preference number: 6 (lower is better)
Translates to: IFEAQSQSRMWC*RRWNFTLGPSV
Trigger: GACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGCCTCGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp TGGAGACAGTGGATGGCCATCCCGAGGGTAACCAAATaGTCCAGCTCGAGGGGGAGATGGAGATCTAAAGAC +
Preference number: 6 (lower is better)
Translates to: WRQWMAIPRVTK*SSSRGRWRSKD
Trigger: GTCTTTAGATCTCCATCTCCCCCTCGAGCTGGACCATTTGGTTACCCTCGGGATGGCCATCCACTGTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS CAA 90 bp TGTGGCTGTAATCTTCGAGGCCCAATCCCAGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCACTCTCGGCCCATCCGTCATTGGGCA +
Preference number: 6 (lower is better)
Translates to: CGCNLRGPIPEQNVV*EKVELHSRPIRHWA
Trigger: TGCCCAATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGCCTCGAAGATTACAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp GTTCTGCGTGGAATCCCAGAGAAGCAGAGGAGAGGATaGATTCTAGAAAGCACGCCTGATGCTGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: VLRGIPEKQRRG*ILESTPDAAAS
Trigger: GGAAGCAGCAGCATCAGGCGTGCTTTCTAGAATCCATCCTCTCCTCTGCTTCTCTGGGATTCCACGCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489565.1
CDS CAA 72 bp AATCTTCGAGGCCCAATCCCAGAGCAGAATGTGGTGTaGGAGAAGGTGGAACTTCACTCTCGGCCCATCCGT +
Preference number: 6 (lower is better)
Translates to: NLRGPIPEQNVV*EKVELHSRPIR
Trigger: ACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCCAACACCACATTCTGCTCTGGGATTGGGCCTCGAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 72 bp ATTCCCCTGAGGGGCAGACTCACAATTCAGAGCTCCTaGGCCAGAGTGAGAGCTCTTATCAGACAGACCGTC +
Preference number: 6 (lower is better)
Translates to: IPLRGRLTIQSS*ARVRALIRQTV
Trigger: GACGGTCTGTCTGATAAGAGCTCTCACTCTGGCCAAGGAGCTCTGAATTGTGAGTCTGCCCCTCAGGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 90 bp CTGGACCCCTTCCAGGCACCCAGAGTAGGTCATACTCAGATGGCCTaGCTCTTCCTTCGTCGTCTTCATATAAAGGGAAACCTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LDPFQAPRVGHTQMA*LFLRRLHIKGNLPS
Trigger: GGAGGGAAGGTTTCCCTTTATATGAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTATGACCTACTCTGGGTGCCTGGAAGGGGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp ACGGTTTTGTGGAGGAAGCACGTGGAGGAGCACACTTaGAGATTTCATTGCCTGGCGGAAGACATCTTGAGC +
Preference number: 6 (lower is better)
Translates to: TVLWRKHVEEHT*RFHCLAEDILS
Trigger: GCTCAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp GTTTCTACCAGGGAAGAATCCAGTGGTGCCAGAGGCTaGTTTTTATCCTGCTGCTATGCAAATCAGGCCCCC +
Preference number: 6 (lower is better)
Translates to: VSTREESSGARG*FLSCCYANQAP
Trigger: GGGGGCCTGATTTGCATAGCAGCAGGATAAAAACCAGCCTCTGGCACCACTGGATTCTTCCCTGGTAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488622.1
CDS CAA 72 bp CACGGTTTTGTGGAGGAAGCACGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGCGGAAGACATCTTGAG +
Preference number: 6 (lower is better)
Translates to: HGFVEEARGGAH*EISLPGGRHLE
Trigger: CTCAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 90 bp CCCAAAAAGCTCCTCTGCCTCTGCAGAAAGAGAACGAGCACAGAATaGAGAGCCGTATGCATTTGGCTGAAGACGAGGAAAAGCGTGCGC +
Preference number: 6 (lower is better)
Translates to: PKKLLCLCRKRTSTE*RAVCIWLKTRKSVR
Trigger: GCGCACGCTTTTCCTCGTCTTCAGCCAAATGCATACGGCTCTCAATTCTGTGCTCGTTCTCTTTCTGCAGAGGCAGAGGAGCTTTTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CAA 90 bp CATACTGTTCACGGTTTTGTGGAGGAAGCACGTGGAGGAGCACACTaGGAGATTTCATTGCCTGGCGGAAGACATCTTGAGCCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: HTVHGFVEEARGGAH*EISLPGGRHLEPEQ
Trigger: TTGCTCAGGCTCAAGATGTCTTCCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp CTGGATCATCCCTCGGATGTTTCCCTCCATGGACATTaGCCGCCTAAGTGTTTCCATAGCTTCGTGGTTGGA +
Preference number: 6 (lower is better)
Translates to: LDHPSDVSLHGH*PPKCFHSFVVG
Trigger: TCCAACCACGAAGCTATGGAAACACTTAGGCGGTCAATGTCCATGGAGGGAAACATCCGAGGGATGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp GACCGTCCGATTTTTGTCCAGCCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGTCCATGCTCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: DRPIFVQPMSEP*FHLAQGPCSSR
Trigger: CCTCGAAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGACGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351153.5
ENST00000614500.3
CDS GCA 72 bp GTTTTTATCCTGCTGCTATGCAAATCAGGCCCCCACTaGCCTTGTCAGCACAGGTGTGGATATACAATGCCC +
Preference number: 6 (lower is better)
Translates to: VFILLLCKSGPH*PCQHRCGYTMP
Trigger: GGGCATTGTATATCCACACCTGTGCTGACAAGGGCAGTGGGGGCCTGATTTGCATAGCAGCAGGATAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488622.1
CDS CCA 72 bp GAGAAGGTGGAACTTCACTCTCGGCCCATCCGTCATTaGGCAGCAATAGACCTTTCTGTTTGTCTTGTGGAC +
Preference number: 6 (lower is better)
Translates to: EKVELHSRPIRH*AAIDLSVCLVD
Trigger: GTCCACAAGACAAACAGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 72 bp GGAGAAGGTGGAACTTCACTCTCGGCCCATCCGTCATaGGGCAGCAATAGACCTTTCTGTTTGTCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: GEGGTSLSAHPS*GSNRPFCLSCG
Trigger: TCCACAAGACAAACAGAAAGGTCTATTGCTGCCCAATGACGGATGGGCCGAGAGTGAAGTTCCACCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp CCCGCTTGGACCTGCTGTTGTCTTCAATGCCTCGGATaGAGAGTCCTAGAATCCTTCCACTCAGAGATGAAA +
Preference number: 6 (lower is better)
Translates to: PAWTCCCLQCLG*RVLESFHSEMK
Trigger: TTTCATCTCTGAGTGGAAGGATTCTAGGACTCTTCATCCGAGGCATTGAAGACAACAGCAGGTCCAAGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp TTTTCATACTGTTCACGGTTTTGTGGAGGAAGCACGTaGAGGAGCACACTTGGAGATTTCATTGCCTGGCGG +
Preference number: 6 (lower is better)
Translates to: FSYCSRFCGGST*RSTLGDFIAWR
Trigger: CCGCCAGGCAATGAAATCTCCAAGTGTGCTCCTCCACGTGCTTCCTCCACAAAACCGTGAACAGTATGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000489565.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp CCAACTTTGCCTTCAAAGCAGGCCCATACCTCAGCATaGCGCCGAAGCCCTTCTTCTTTATTTTCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: PTLPSKQAHTSA*RRSPSSLFSFL
Trigger: CAGAAAGGAAAATAAAGAAGAAGGGCTTCGGCGCCATGCTGAGGTATGGGCCTGCTTTGAAGGCAAAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CAA 72 bp CTCCTCTGCCTCTGCAGAAAGAGAACGAGCACAGAATaGAGAGCCGTATGCATTTGGCTGAAGACGAGGAAA +
Preference number: 6 (lower is better)
Translates to: LLCLCRKRTSTE*RAVCIWLKTRK
Trigger: TTTCCTCGTCTTCAGCCAAATGCATACGGCTCTCAATTCTGTGCTCGTTCTCTTTCTGCAGAGGCAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CAA 90 bp CCCTCCATGGACATTGACCGCCTAAGTGTTTCCATAGCTTCGTGGTaGGACTTTCCCAAAAGAGATTCCCCATTAACTGCAATCAGCTGG +
Preference number: 6 (lower is better)
Translates to: PSMDIDRLSVSIASW*DFPKRDSPLTAISW
Trigger: CCAGCTGATTGCAGTTAATGGGGAATCTCTTTTGGGAAAGTCCAACCACGAAGCTATGGAAACACTTAGGCGGTCAATGTCCATGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp CACAAGGTCCATGCTCTTCGAGGCTTTCAAATTAATTaGTTCAGGCTGCCTGGCCGGTGTCACAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: HKVHALRGFQIN*FRLPGRCHRSE
Trigger: TTCAGATCTGTGACACCGGCCAGGCAGCCTGAATCAATTAATTTGAAAGCCTCGAAGAGCATGGACCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp AGCATTTTGACAGTTCTCAAAGCATGGCTTGGAAAATaGCCCACACTCTGCAGGATCCTCCATTGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: SILTVLKAWLGK*PTLCRILHWSL
Trigger: GAGAGACCAATGGAGGATCCTGCAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGAACTGTCAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS GCA 72 bp GAGATTCCGATTTTTGTCCAGCCAATGAGTGAACCTTaGTTTCATCTGGCACAAGGTCCATGCTCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: EIPIFVQPMSEP*FHLAQGPCSSR
Trigger: CCTCGAAGAGCATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349953.7
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000622699.2
CDS GCA 72 bp TGCAGAAAGAGAACGAGCACAGAATTGAGAGCCGTATaGATTTGGCTGAAGACGAGGAAAAGCGTGCGCTTT +
Preference number: 6 (lower is better)
Translates to: CRKRTSTELRAV*IWLKTRKSVRF
Trigger: AAAGCGCACGCTTTTCCTCGTCTTCAGCCAAATGCATACGGCTCTCAATTCTGTGCTCGTTCTCTTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CAA 72 bp TTCCAGGCACCCAGAGTAGGTCATACTCAGATGGCCTaGCTCTTCCTTCGTCGTCTTCATATAAAGGGAAAC +
Preference number: 6 (lower is better)
Translates to: FQAPRVGHTQMA*LFLRRLHIKGN
Trigger: GTTTCCCTTTATATGAAGACGACGAAGGAAGAGCAAGGCCATCTGAGTATGACCTACTCTGGGTGCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000488622.1
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 72 bp AATTTACTGCCTTTAGGATCCTCCTCAGCTTCTGACTaGAGTCCACACTCTTCTGAGGCAGCTCTCGGTCAT +
Preference number: 6 (lower is better)
Translates to: NLLPLGSSSASD*SPHSSEAALGH
Trigger: ATGACCGAGAGCTGCCTCAGAAGAGTGTGGACTCAAGTCAGAAGCTGAGGAGGATCCTAAAGGCAGTAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494482.1
CDS TCA 72 bp CTTATCAGACAGACCGTCCGATTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATCTGGCACAAGGTCCAT +
Preference number: 6 (lower is better)
Translates to: LIRQTVRFLSSQ*VNLAFIWHKVH
Trigger: ATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGACGGTCTGTCTGATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351153.5
ENST00000614500.3
CDS GCA 72 bp CCTGTCATCACTGTAACTTTCCCCAAAAAGCTCCTCTaGCTCTGCAGAAAGAGAACGAGCACAGAATTGAGA +
Preference number: 6 (lower is better)
Translates to: PVITVTFPKKLL*LCRKRTSTELR
Trigger: TCTCAATTCTGTGCTCGTTCTCTTTCTGCAGAGGCAGAGGAGCTTTTTGGGGAAAGTTACAGTGATGACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462231.5
CDS CAA 90 bp ATGCAGGATACTATTATCATTTCGCCTAGAGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGGCTTGGAAAATGCCCCACACTCTGC +
Preference number: 6 (lower is better)
Translates to: MQDTIIISPRGGYSI*TVLKAWLGKCPTLC
Trigger: GCAGAGTGTGGGGCATTTTCCAAGCCATGCTTTGAGAACTGTCAAAATGCTGTAACCACCTCTAGGCGAAATGATAATAGTATCCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp AAGCTGATGCATCTGTTTCAGGACTATCGGTTCCTGTaGGATTTGCTGTCTTTAGTCCCGATTTTCCATGGA +
Preference number: 6 (lower is better)
Translates to: KLMHLFQDYRFL*DLLSLVPIFHG
Trigger: TCCATGGAAAATCGGGACTAAAGACAGCAAATCTCACAGGAACCGATAGTCCTGAAACAGATGCATCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS TCA 72 bp ATCTTTGCTTGGAGATTCCGATTTTTGTCCAGCCAATaGGTGAACCTTGCTTTCATCTGGCACAAGGTCCAT +
Preference number: 6 (lower is better)
Translates to: IFAWRFRFLSSQ*VNLAFIWHKVH
Trigger: ATGGACCTTGTGCCAGATGAAAGCAAGGTTCACTCATTGGCTGGACAAAAATCGGAATCTCCAAGCAAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000349953.7
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000622699.2
CDS GCA 72 bp TTCTGTTTGTCTTGTGGACTGCAAGTGCCAAGTGGATaGAGGATACTATTATCATTTCGCCTAGAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: FCLSCGLQVPSG*RILLSFRLEVV
Trigger: AACCACCTCTAGGCGAAATGATAATAGTATCCTGCATCCACTTGGCACTTGCAGTCCACAAGACAAACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CCA 72 bp TTGCTGATGTGCATGGTTCCCGAAAGTGGTTCACTCTaGCATAATTGGGGTCCATTTCATCATCATCCATAT +
Preference number: 6 (lower is better)
Translates to: LLMCMVPESGSL*HNWGPFHHHPY
Trigger: ATATGGATGATGATGAAATGGACCCCAATTATGCCAGAGTGAACCACTTTCGGGAACCATGCACATCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS CAA 72 bp ACTATTATCATTTCGCCTAGAGGTGGTTACAGCATTTaGACAGTTCTCAAAGCATGGCTTGGAAAATGCCCC +
Preference number: 6 (lower is better)
Translates to: TIIISPRGGYSI*TVLKAWLGKCP
Trigger: GGGGCATTTTCCAAGCCATGCTTTGAGAACTGTCAAAATGCTGTAACCACCTCTAGGCGAAATGATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000349953.7
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000462231.5
ENST00000613457.4
ENST00000614500.3
ENST00000622699.2
CDS CAA 90 bp TGCTGTGAGACTGAACAAAGTTTTACATGGAGAAACAGTCCACAATaGCTTCACTTCCTCAAAGCCCACATACAGCTTCCTCTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: CCETEQSFTWRNSPQ*LHFLKAHIQLPLLC
Trigger: ACAAAGAAGAGGAAGCTGTATGTGGGCTTTGAGGAAGTGAAGCAATTGTGGACTGTTTCTCCATGTAAAACTTTGTTCAGTCTCACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465890.1
CDS CAA 72 bp ACTGAACAAAGTTTTACATGGAGAAACAGTCCACAATaGCTTCACTTCCTCAAAGCCCACATACAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: TEQSFTWRNSPQ*LHFLKAHIQLP
Trigger: AGGAAGCTGTATGTGGGCTTTGAGGAAGTGAAGCAATTGTGGACTGTTTCTCCATGTAAAACTTTGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465890.1
CDS TCA 72 bp ATTGGGGTCCATTTCATCATCATCCATATCATACACTaGTCCAATTGCACCAGTAGCATAATCAAGAAGACC +
Preference number: 6 (lower is better)
Translates to: IGVHFIIIHIIH*SNCTSSIIKKT
Trigger: GGTCTTCTTGATTATGCTACTGGTGCAATTGGATCAGTGTATGATATGGATGATGATGAAATGGACCCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351153.5
ENST00000358768.6
ENST00000406610.7
ENST00000613457.4
ENST00000614500.3
CDS CAA 72 bp ACTAAACTGAGAGAAAACCTTTTTAACCGGCCTGTCTaGATATCCTGCAATTCCACCACATTGCAATCCAAA +
Preference number: 6 (lower is better)
Translates to: TKLRENLFNRPV*ISCNSTTLQSK
Trigger: TTTGGATTGCAATGTGGTGGAATTGCAGGATATCAAGACAGGCCGGTTAAAAAGGTTTTCTCTCAGTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471958.1
CDS CAA 72 bp TCACTTCCTCAAAGCCCACATACAGCTTCCTCTTCTTaGTTAATACAACCCTTAGGTTCTTTTACATACTTT +
Preference number: 6 (lower is better)
Translates to: SLPQSPHTASSS*LIQPLGSFTYF
Trigger: AAAGTATGTAAAAGAACCTAAGGGTTGTATTAACAAAGAAGAGGAAGCTGTATGTGGGCTTTGAGGAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465890.1