RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAQR9 (Homo sapiens)

Ensembl gene IDs: ENSG00000188582

Ensembl transcript IDs: ENST00000340634.6, ENST00000492509.5, ENST00000498470.1

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGGGCAAGAACAAGTGACTATCTCCCTCCCGCTTGACCACCCCTaGCAACCTCCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTT +
Preference number: 1 (lower is better)
Translates to: QGQEQVTISLPLDHP*QPPYFKASSGLGSL
Trigger: AAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGGAGGTTGGCAGGGGTGGTCAAGCGGGAGGGAGATAGTCACTTGTTCTTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp GGACTTACGGCATTCTACCTACAGCCAAGGTCAGAGTTTGGTTCCTaGCCAGAGAGACTTTCTGGGGCTTCTCTCTTCCACCAGAAGACA +
Preference number: 1 (lower is better)
Translates to: GLTAFYLQPRSEFGS*PERLSGASLFHQKT
Trigger: TGTCTTCTGGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGGTAGAATGCCGTAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp AACTCAGGGACTTACGGCATTCTACCTACAGCCAAGGTCAGAGTTTaGTTCCTGGCCAGAGAGACTTTCTGGGGCTTCTCTCTTCCACCA +
Preference number: 1 (lower is better)
Translates to: NSGTYGILPTAKVRV*FLARETFWGFSLPP
Trigger: TGGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGGTAGAATGCCGTAAGTCCCTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp CCTACAGCCAAGGTCAGAGTTTGGTTCCTGGCCAGAGAGACTTTCTaGGGCTTCTCTCTTCCACCAGAAGACAAAAGGGTAATGGCTGTA +
Preference number: 1 (lower is better)
Translates to: PTAKVRVWFLARETF*GFSLPPEDKRVMAV
Trigger: TACAGCCATTACCCTTTTGTCTTCTGGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp TGCTCTGCACGCTCCTGTAAGCTATCTCCAATCCCACCAAAAACTTaGAACCAACACCATCTTCTGCCCTCCTGGATGGACCATGAAACC +
Preference number: 1 (lower is better)
Translates to: CSARSCKLSPIPPKT*NQHHLLPSWMDHET
Trigger: GGTTTCATGGTCCATCCAGGAGGGCAGAAGATGGTGTTGGTTTCAAGTTTTTGGTGGGATTGGAGATAGCTTACAGGAGCGTGCAGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp AACTTCTCCCATGGCTGCATTAGAAACACATCTACATTAGAGGGTTaGCTCTTTGTCCTTGTTGGGAACCCAAATGCTCTGCACGCTCCT +
Preference number: 1 (lower is better)
Translates to: NFSHGCIRNTSTLEG*LFVLVGNPNALHAP
Trigger: AGGAGCGTGCAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGATGTGTTTCTAATGCAGCCATGGGAGAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp GCTGGATATGTGGAAAGTGAAGTTTCAAGGGTAGTGAAAATGGCCTaGGAGATGGCTGAAATGAAGAGAGTTCAGAGCGACCACATGGTC +
Preference number: 1 (lower is better)
Translates to: AGYVESEVSRVVKMA*EMAEMKRVQSDHMV
Trigger: GACCATGTGGTCGCTCTGAACTCTCTTCATTTCAGCCATCTCCCAGGCCATTTTCACTACCCTTGAAACTTCACTTTCCACATATCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp GAAGAGGAAAGTGAATCCTCATTCTCTCTGGGACATACTGGGTGCTaGAACCTGTGTGGCAAAAAGTGTGTCATCTCACTGTACTCATGC +
Preference number: 1 (lower is better)
Translates to: EEESESSFSLGHTGC*NLCGKKCVISLYSC
Trigger: GCATGAGTACAGTGAGATGACACACTTTTTGCCACACAGGTTTCAGCACCCAGTATGTCCCAGAGAGAATGAGGATTCACTTTCCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 90 bp ATCTACATTAGAGGGTTGGCTCTTTGTCCTTGTTGGGAACCCAAATaGTCTGCACGCTCCTGTAAGCTATCTCCAATCCCACCAAAAACT +
Preference number: 1 (lower is better)
Translates to: IYIRGLALCPCWEPK*SARSCKLSPIPPKT
Trigger: AGTTTTTGGTGGGATTGGAGATAGCTTACAGGAGCGTGCAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 90 bp GGTCAAACGCTACAAGATGTGGTTAAGCTGACAAACAGAATTCCTTaGCTGTCTACTCGAACACTAACACCCTGGGAGTTCACATGCTTT +
Preference number: 1 (lower is better)
Translates to: GQTLQDVVKLTNRIP*LSTRTLTPWEFTCF
Trigger: AAAGCATGTGAACTCCCAGGGTGTTAGTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGTCAGCTTAACCACATCTTGTAGCGTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp TATGAAGGCCACTCTGTCCAGCTCTGTAGCCCCATACTTTCTCCCTaGGCTATTTATAGAAAGTGTATGGCTAGTGGAAAAGTTCACATT +
Preference number: 1 (lower is better)
Translates to: YEGHSVQLCSPILSP*AIYRKCMASGKVHI
Trigger: AATGTGAACTTTTCCACTAGCCATACACTTTCTATAAATAGCCCAGGGAGAAAGTATGGGGCTACAGAGCTGGACAGAGTGGCCTTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp AACAGAAGTTCCCAAGGATTCTATTTACCCTCTTTACTGTGTACCTaGCCTCACAGGGGCTACTCCTTATTACCAATGGCACAGATGATT +
Preference number: 1 (lower is better)
Translates to: NRSSQGFYLPSLLCT*PHRGYSLLPMAQMI
Trigger: AATCATCTGTGCCATTGGTAATAAGGAGTAGCCCCTGTGAGGTCAGGTACACAGTAAAGAGGGTAAATAGAATCCTTGGGAACTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp CTGGTCCATATAGTGATGGCATGGGGCTTATTCTTCTTTCTATTCTaGAGAAACAAGGGACAGAGTTCCAGGGCTGTACATTTTATTGGC +
Preference number: 1 (lower is better)
Translates to: LVHIVMAWGLFFFLF*RNKGQSSRAVHFIG
Trigger: GCCAATAAAATGTACAGCCCTGGAACTCTGTCCCTTGTTTCTTCAGAATAGAAAGAAGAATAAGCCCCATGCCATCACTATATGGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 90 bp AAGCCAGGAGATAAATGTACCACTCAAAATATACCTGGACACTCGTaGTCAGGTCAAACGCTACAAGATGTGGTTAAGCTGACAAACAGA +
Preference number: 1 (lower is better)
Translates to: KPGDKCTTQNIPGHS*SGQTLQDVVKLTNR
Trigger: TCTGTTTGTCAGCTTAACCACATCTTGTAGCGTTTGACCTGAGCACGAGTGTCCAGGTATATTTTGAGTGGTACATTTATCTCCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp AAAGGATCTCAGGGACATGCTCATGAATGTTTCAAGGATTTAGGGTaGCTGCCCATCATTTCCATAGTCTGGAACCAAATCAAACTTCAG +
Preference number: 1 (lower is better)
Translates to: KGSQGHAHECFKDLG*LPIISIVWNQIKLQ
Trigger: CTGAAGTTTGATTTGGTTCCAGACTATGGAAATGATGGGCAGTCACCCTAAATCCTTGAAACATTCATGAGCATGTCCCTGAGATCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp TCTAGAAACAAGAGTTTATTTACACAGTGTCCTTCTTCAATATCATaGTGTACTGGGAGAAGCAGGGCCATCTTTACAGCACGGCCAAAT +
Preference number: 1 (lower is better)
Translates to: SRNKSLFTQCPSSIS*CTGRSRAIFTARPN
Trigger: ATTTGGCCGTGCTGTAAAGATGGCCCTGCTTCTCCCAGTACACCATGATATTGAAGAAGGACACTGTGTAAATAAACTCTTGTTTCTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp GGTGAACCTCATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATaGAATCCTTTTAGAAATCTTTTCTCTTCAAGCTGGATATGTGGA +
Preference number: 1 (lower is better)
Translates to: GEPHKADGWRRPKYT*NPFRNLFSSSWICG
Trigger: TCCACATATCCAGCTTGAAGAGAAAAGATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATGAGGTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp GCAAATCCAAGAACAGTCACCGTATTTAAAACCTTTGTTTGGAAATaGGTGAACCTCATAAGGCAGATGGTTGGAGAAGGCCTAAATACA +
Preference number: 1 (lower is better)
Translates to: ANPRTVTVFKTFVWK*VNLIRQMVGEGLNT
Trigger: TGTATTTAGGCCTTCTCCAACCATCTGCCTTATGAGGTTCACCCATTTCCAAACAAAGGTTTTAAATACGGTGACTGTTCTTGGATTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp CCTACAAAGCTCCATTCTTTTGACAAATCCAAGCATTCCTCAGACTaGAACAGAAGTTCCCAAGGATTCTATTTACCCTCTTTACTGTGT +
Preference number: 1 (lower is better)
Translates to: PTKLHSFDKSKHSSD*NRSSQGFYLPSLLC
Trigger: ACACAGTAAAGAGGGTAAATAGAATCCTTGGGAACTTCTGTTTCAGTCTGAGGAATGCTTGGATTTGTCAAAAGAATGGAGCTTTGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 90 bp GGAACAAAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTaGGTTCCTGCTCTGTTAAATTGTGATTCTCTGTGTCTACCTGTT +
Preference number: 1 (lower is better)
Translates to: GTKELGTGSCRNFFL*VPALLNCDSLCLPV
Trigger: AACAGGTAGACACAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR GCA 90 bp CATGCTTATAAACTCATCAAAGTGAAAGGTGCCTCACCTCTTTATTaGCTTGGTACTCAGTTGATTGGCGAGAATAATTTTGTTCATAGC +
Preference number: 1 (lower is better)
Translates to: HAYKLIKVKGASPLY*LGTQLIGENNFVHS
Trigger: GCTATGAACAAAATTATTCTCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCACCTTTCACTTTGATGAGTTTATAAGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 90 bp ACTAGTCATGATGTACAGGGAACAAAAGAACTTGGTACTGGTTCTTaGAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGAT +
Preference number: 1 (lower is better)
Translates to: TSHDVQGTKELGTGS*RNFFLWVPALLNCD
Trigger: ATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTGTACATCATGACTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR TCA 90 bp TTTAAAGACCTACTAGGTCTTTATCATTTGAGTAAGAGCTCAAGGTaGTTAAACTCACCGGATAAAGATGAGTCTTTCCAAAAAGCTCTG +
Preference number: 1 (lower is better)
Translates to: FKDLLGLYHLSKSSR*LNSPDKDESFQKAL
Trigger: CAGAGCTTTTTGGAAAGACTCATCTTTATCCGGTGAGTTTAATCACCTTGAGCTCTTACTCAAATGATAAAGACCTAGTAGGTCTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 90 bp GAGTTGTTGATTTTTCAGTTCAGCTTTTTACTTGTTAAGATGGAGTaGCAACTTCTAAGCTCCTTACATCCCATACTGGAAACTCTTAAG +
Preference number: 1 (lower is better)
Translates to: ELLIFQFSFLLVKME*QLLSSLHPILETLK
Trigger: CTTAAGAGTTTCCAGTATGGGATGTAAGGAGCTTAGAAGTTGTCACTCCATCTTAACAAGTAAAAAGCTGAACTGAAAAATCAACAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR TCA 90 bp AGAGCTGGAGTAAAAACTAGGCCATTAGCTTCACTCAGGTCATCCTaGAGTAGTAAAGTAGCTCTTAGAGAATTACATTTTGTACTAATA +
Preference number: 1 (lower is better)
Translates to: RAGVKTRPLASLRSS*SSKVALRELHFVLI
Trigger: TATTAGTACAAAATGTAATTCTCTAAGAGCTACTTTACTACTTCAGGATGACCTGAGTGAAGCTAATGGCCTAGTTTTTACTCCAGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR CCA 90 bp CACAGATTCTTAAGGAGCCACTCTAGAACAAAAATGCCTACAAACTaGTTAGAAATCTGCAAACCAGAAATGCAATACAGTTATCCTTTT +
Preference number: 1 (lower is better)
Translates to: HRFLRSHSRTKMPTN*LEICKPEMQYSYPF
Trigger: AAAAGGATAACTGTATTGCATTTCTGGTTTGCAGATTTCTAACCAGTTTGTAGGCATTTTTGTTCTAGAGTGGCTCCTTAAGAATCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 90 bp AAACTCAGGGACTTACGGCATTCTACCTACAGCCAAGGTCAGAGTTaGGTTCCTGGCCAGAGAGACTTTCTGGGGCTTCTCTCTTCCACC +
Preference number: 2 (lower is better)
Translates to: KLRDLRHSTYSQGQS*VPGQRDFLGLLSST
Trigger: GGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGGTAGAATGCCGTAAGTCCCTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTATCTCCCTCCCGCTTaGCCACCCCTGCCAACCTCC +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSYLPPA*PPLPTS
Trigger: GGAGGTTGGCAGGGGTGGTCAAGCGGGAGGGAGATA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGCCAGCCTACCAGTGCTaGGGTAAGTGTTCATCTACC +
Preference number: 2 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLPAYQC*GKCSST
Trigger: GGTAGATGAACACTTACCTCAGCACTGGTAGGCTGG...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTGTTGGGAACCCAAATaGTCTGCACGCTCCTGTAAG +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLECWEPK*SARSCK
Trigger: CTTACAGGAGCGTGCAGAGCATTTGGGTTCCCAACA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCATCTTCTGCCCTCCTaGATGGACCATGAAACCTTG +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEHLLPS*MDHETL
Trigger: CAAGGTTTCATGGTCCATCCAGGAGGGCAGAAGATG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAGGGGCAAGAACAAGTaGCTATCTCCCTCCCGCTTG +
Preference number: 2 (lower is better)
Translates to: LPSWMDHETLIFSQVRKARGKNK*LSPSRL
Trigger: CAAGCGGGAGGGAGATAGTCACTTGTTCTTGCCCCT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTCAAGCAGCTTCCCCTaGTGTCCAGTTCAAGTGTAT +
Preference number: 2 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDSSSFP*CPVQVY
Trigger: ATACACTTGAACTGGACATCAGGGGAAGCTGCTTGA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACAAGGGAAGAGGAAAGTaGATCCTCATTCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDKGRGK*ILILSG
Trigger: CCCAGAGAGAATGAGGATTCACTTTCCTCTTCCCTT...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCCGCTTGACCACCCCTaGCAACCTCCCTACTTCAAA +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSPLDHP*QPPYFK
Trigger: TTTGAAGTAGGGAGGTTGGCAGGGGTGGTCAAGCGG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGACCTGGATAGTTCCGTaGAAATGGGGAGATTCAAAG +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLETWIVP*KWGDSK
Trigger: CTTTGAATCTCCCCATTTGCACGGAACTATCCAGGT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTGGCTTCTAACAAAATaGCCTACCAGGAAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLWLLTK*PTRKCG
Trigger: ACCACACTTCCTGGTAGGTCATTTTGTTAGAAGCCA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCATGTGGAAATATCCTaGTTTCCACAGTTGTCCTTG +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEHVEIS*FPQLSL
Trigger: CAAGGACAACTGTGGAAATCAGGATATTTCCACATG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGATGAATGGAAACATATaGAGGCCACTCTGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLMNGNI*RPLCPA
Trigger: AGCTGGACAGAGTGGCCTTCATATGTTTCCATTCAT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTTTTCCCTATGGTTTTaGAGCACCTTCCTTGAGCAA +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEFSLWF*STFLEQ
Trigger: TTGCTCAAGGAAGGTGCTGCAAAACCATAGGGAAAA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGCCAAGGTCAGAGTTTaGTTCCTGGCCAGAGAGACT +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSAKVRV*FLARET
Trigger: AGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACCAATGCAGAAGGCTGTaGAATTCAAAACTATGTGAC +
Preference number: 2 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDQCRRL*NSKLCD
Trigger: GTCACATAGTTTTGAATTTCACAGCCTTCTGCATTG...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGAAGATGTGGTTAAGCTaGCAAACAGAATTCCTTGCC +
Preference number: 2 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLKMWLS*QTEFLA
Trigger: GGCAAGGAATTCTGTTTGTCAGCTTAACCACATCTT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTCCAGGCATGACTCTATaGCGCCGCTCCTTGAGATGT +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPPGMTL*RRSLRC
Trigger: ACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGG...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTCAGAGTTTGGTTCCTaGCCAGAGAGACTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSSEFGS*PERLSG
Trigger: CCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAAGCATTCCTCAGACTaGAACAGAAGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAKHSSD*NRSSQG
Trigger: TCCTTGGGAACTTCTGTTTCAGTCTGAGGAATGCTT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGCACTTCACAAAGGATaGGACACTGACACTCGTCAA +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSALHKG*DTDTRQ
Trigger: TTGACGAGTGTCAGTGTCTCATCCTTTGTGAAGTGC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCAGCTCAAAGATTGCTaGCAGAGTGAAGTCAGCAGT +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSQLKDC*QSEVSS
Trigger: ACTGCTGACTTCACTCTGTCAGCAATCTTTGAGCTG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTACCAACACCATCTTCTaGCCTCCTGGATGGACCATG +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPTNTIF*PPGWTM
Trigger: CATGGTCCATCCAGGAGGGCAGAAGATGGTGTTGGT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATCTTTACTGTGTACCTaGCCTCACAGGGGCTACTCC +
Preference number: 2 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRSLLCT*PHRGYS
Trigger: GGAGTAGCCCCTGTGAGGTCAGGTACACAGTAAAGA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATCACCTACAAGCCAGTaGAGTACAGCTGGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQSPTSQ*STAGWV
Trigger: TACCCAGCCAGCTGTACTTCACTGGCTTGTAGGTGA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTATGGCGCCGCTCCTTaGGATGTCATCCAGATCATG +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNYGAAP*DVIQIM
Trigger: CATGATCTGGATGACATCTCAAGGAGCGGCGCCATA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATTCATTTTCCAGGCATaGCTCTATGGCGCCGCTCCT +
Preference number: 2 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRFIFQA*LYGAAP
Trigger: AGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTGTTAAGCCCTGGGTTTaGGTCTTTGTGCCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPVKPWV*VFVPVS
Trigger: GGAAACAGGCACAAAGACGCAAACCCAGGGCTTAAC...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGACTCGTCAACAACTGTaGAAAGTGTATTTACAATCT +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLETRQQL*KVYLQS
Trigger: AGATTGTAAATACACTTTGCACAGTTGTTGACGAGT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATCATTTCCATAGTCTaGAACCAAATCAAACTTCAG +
Preference number: 2 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEIISIV*NQIKLQ
Trigger: CTGAAGTTTGATTTGGTTCCAGACTATGGAAATGAT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTGTGTTAATCTAGAGTaGCCATCTCAATTACAGGTT +
Preference number: 2 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLCVNLE*PSQLQV
Trigger: AACCTGTAATTGAGATGGCCACTCTAGATTAACACA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCTCTCTGGGACATACTaGGTGCTGAAACCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNLSGTY*VLKPVW
Trigger: CCACACAGGTTTCAGCACCCAGTATGTCCCAGAGAG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATATCATGGTGTACTaGGAGAAGCAGGGCCATCTT +
Preference number: 2 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGNIMVY*EKQGHL
Trigger: AAGATGGCCCTGCTTCTCCCAGTACACCATGATATT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTTCACAGTTGTATCATaGCACACGCCTTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSFTVVS*HTPSEN
Trigger: GTTTTCTGAAGGCGTGTGTCATGATACAACTGTGAA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGATCCCACCAAAAACTTaGAACCAACACCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGIPPKT*NQHHLL
Trigger: CAGAAGATGGTGTTGGTTTCAAGTTTTTGGTGGGAT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGGACATACTGGGTGCTaGAACCTGTGTGGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNGHTGC*NLCGKK
Trigger: CTTTTTGCCACACAGGTTTCAGCACCCAGTATGTCC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTACTAGTAAACACAGTTaGGCAGACAATGGTCTCCGC +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPTSKHS*ADNGLR
Trigger: GCGGAGACCATTGTCTGCTCAACTGTGTTTACTAGT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCCATTCTGCCTTGAGTaGTTATTGCGTATTTTGGGT +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSPFCLE*LLRILG
Trigger: ACCCAAAATACGCAATAAGCACTCAAGGCAGAATGG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 90 bp GTCTTGTCTCTATGTGGAATATCATTTCCTTTCAAGCTGCAGAGTTaGAGTGGGTGTTTATTTGATCCTTCTGTTCCCCTCTCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: VLSLCGISFPFKLQS*SGCLFDPSVPLSLS
Trigger: AGAAAGGGAGAGGGGAACAGAAGGATCAAATAAACACCCACTCAAACTCTGCAGCTTGAAAGGAAATGATATTCCACATAGAGACAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTTTACAAGCCAGTCATaGCATGACCGAGGAACTCAT +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPFTSQS*HDRGTH
Trigger: ATGAGTTCCTCGGTCATGTCATGACTGGCTTGTAAA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCAGTAAGAGCTCAAGGTaGTTAAACTCACCGGATAAA +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSSKSSR*LNSPDK
Trigger: TTTATCCGGTGAGTTTAATCACCTTGAGCTCTTACT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GATTTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGGAACCAGGAAGCCACTaGCCAAAGTCCTTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: DLLVGIGWLTNSLEELQEEPGSH*PKSFSY
Trigger: ATAGCTGAAGGACTTTGGTCAGTGGCTTCCTGGTTC...CTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498470.1
3UTR-3UTR GCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGGGTTTGCGTCTTTGTaGCTGTTTCCTACAAAGCTC +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNGFASL*LFPTKL
Trigger: GAGCTTTGTAGGAAACAGGCACAAAGACGCAAACCC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAAAACTCAGGCTGACTaGACAGTTGAACTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNKTQAD*TVELAA
Trigger: GGCAGCAAGTTCAACTGTGCAGTCAGCCTGAGTTTT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAAAGCCTCCAGTGGGTTaGGATCCCTTTGTAGCAGTG +
Preference number: 2 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIKPPVG*DPFVAV
Trigger: CACTGCTACAAAGGGATCCCAACCCACTGGAGGCTT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAACTCCTGGATGGACCATaGAACCTTGATTTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQLLDGP*NLDFQS
Trigger: TGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAG...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCAATTAACAGCTAAATaGGCATTCTTGGCCCCTGAC +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNQLTAK*AFLAPD
Trigger: GTCAGGGGCCAAGAATGCTCATTTAGCTGTTAATTG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTCAGCAGTTTGCTCTGTaGCTTCATGTCTCTGATGGA +
Preference number: 2 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSQQFAL*LHVSDG
Trigger: TCCATCAGAGACATGAAGTCACAGAGCAAACTGCTG...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTCATCAAAGTGAAAGGTaGCTCACCTCTTTATTGCCT +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPHQSER*LTSLLP
Trigger: AGGCAATAAAGAGGTGAGGCACCTTTCACTTTGATG...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATCTACATTAGAGGGTTaGCTCTTTGTCCTTGTTGGG +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQSTLEG*LFVLVG
Trigger: CCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGTGCTGAAACCTGTGTaGCAAAAAGTGTGTCATCTC +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNVLKPV*QKVCHL
Trigger: GAGATGACACACTTTTTGCCACACAGGTTTCAGCAC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGTAGTGAAAATGGCCTaGGAGATGGCTGAAATGAAG +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNVVKMA*EMAEMK
Trigger: CTTCATTTCAGCCATCTCCCAGGCCATTTTCACTAC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAGTAAGAAACTGTGTTTaGGGACCAGTCATTTGGACT +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQVRNCV*GPVIWT
Trigger: AGTCCAAATGACTGGTCCTCAAACACAGTTTCTTAC...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCAGTCATTTGGACTTTaGTTCAAAAGGCACATTTAT +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSQSFGL*FKRHIY
Trigger: ATAAATGTGCCTTTTGAAGCAAAGTCCAAATGACTG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATCAATTCTGTACATATaGCGACTATCCCCTCACTTG +
Preference number: 2 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRSILYI*RLSPHL
Trigger: CAAGTGAGGGGATAGTCGGCATATGTACAGAATTGA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGCTCCAACCACTGAATaGTTCCTTTTTCAGTTTGTC +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNAPTTE*FLFQFV
Trigger: GACAAACTGAAAAAGGAAGCATTCAGTGGTTGGAGC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTTATCCTTAAGTaGCCTCTCCTTAAGGTCAAA +
Preference number: 2 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGNFILK*PLLKVK
Trigger: TTTGACCTTAAGGAGAGGCCACTTAAGGATAAAATT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAAAATGCCTACAAACTaGTTAGAAATCTGCAAACCA +
Preference number: 2 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGKMPTN*LEICKP
Trigger: TGGTTTGCAGATTTCTAACCAGTTTGTAGGCATTTT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTGTGCTAGGTTTTGCTaGAAGAGGGAATTTAATAAA +
Preference number: 2 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSCARFC*KREFNK
Trigger: TTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 90 bp ATCAAAGTGAAAGGTGCCTCACCTCTTTATTGCCTTGGTACTCAGTaGATTGGCGAGAATAATTTTGTTCATAGCCTCCAGAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: IKVKGASPLYCLGTQ*IGENNFVHSLQKRK
Trigger: TTTTCTTTTCTGGAGGCTATGAACAAAATTATTCTCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCACCTTTCACTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATACCAATGGCACAGATaGTTGGAAAAGCAAACTCTT +
Preference number: 2 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRYQWHR*LEKQTL
Trigger: AAGAGTTTGCTTTTCCAATCATCTGTGCCATTGGTA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp CAGGGAACAAAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCCAAGAAGAGTTGTTaGTTTTTCAGTTCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: QGTKELGTGSCRNFFLWVPKKSC*FFSSAF
Trigger: AAAAGCTGAACTGAAAAATCAACAACTCTTCTTGGG...AACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR TCA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTTCAAGCTGCAGAGTTTaGGTGGGTGTTTATTTGATC +
Preference number: 2 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSSSCRV*VGVYLI
Trigger: GATCAAATAAACACCCACTCAAACTCTGCAGCTTGA...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR CCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATTAAGCAAGGATGGATaGCATCAGTCTAGAACTTCT +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQLSKDG*HQSRTS
Trigger: AGAAGTTCTAGACTGATGCCATCCATCCTTGCTTAA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAAGAGAATTCTGTCTGTaGACCTGGAAGAACAACAAA +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQREFCL*TWKNNK
Trigger: TTTGTTGTTCTTCCAGGTCCACAGACAGAATTCTCT...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTAGCTGGATTTATGAATaGAAACATATGAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPSWIYE*KHMKAT
Trigger: AGTGGCCTTCATATGTTTCCATTCATAAATCCAGCT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATATTTACTCACTGCCTTTaGGAAATCCCTGGATGTCAA +
Preference number: 2 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIFTHCL*EIPGCQ
Trigger: TTGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAA...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAACTTGAATGCATCTATTaGATTAAGTTACAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQLECIY*IKLQLR
Trigger: CCTCAGCTGTAACTTAATTCAATAGATGCATTCAAG...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTCTAATTCTGCAACTTaGTCACAGATTCTTAAGGAG +
Preference number: 2 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNSNSAT*SQILKE
Trigger: CTCCTTAAGAATCTGTGAGCAAGTTGCAGAATTAGA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACCTTTGAGAAATCCCTaGATGTCAAAGACATCACCT +
Preference number: 2 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLPLRNP*MSKTSP
Trigger: AGGTGATGTCTTTGACATCCAGGGATTTCTCAAAGG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATATATGGTACCTATTTaGAAACATGAAGTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: SDCHITLKCVINLDSSVQYMVPI*KHEVKP
Trigger: TGGCTTCACTTCATGTTTGCAAATAGGTACCATATA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATACTTTGGGGCTTTATTTaGGATTTTACTCACTGCCTT +
Preference number: 2 (lower is better)
Translates to: EIQNYVTKKIQCVPQALILWGFI*DFTHCL
Trigger: AAGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAG...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 72 bp GAACAAGTGACTATCTCCCTCCCGCTTGACCACCCCTaGCAACCTCCCTACTTCAAAGCCTCCAGTGGGTTG +
Preference number: 3 (lower is better)
Translates to: EQVTISLPLDHP*QPPYFKASSGL
Trigger: CAACCCACTGGAGGCTTTGAAGTAGGGAGGTTGGCAGGGGTGGTCAAGCGGGAGGGAGATAGTCACTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp GCATTCTACCTACAGCCAAGGTCAGAGTTTGGTTCCTaGCCAGAGAGACTTTCTGGGGCTTCTCTCTTCCAC +
Preference number: 3 (lower is better)
Translates to: AFYLQPRSEFGS*PERLSGASLFH
Trigger: GTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGGTAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGGTTGGCTCTTTGTCCTaGTTGGGAACCCAAATGCTC +
Preference number: 3 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEVGSLS*LGTQML
Trigger: GAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAAC...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGACTGCACAGTTGAACTaGCTGCCCCATTCTGACTGT +
Preference number: 3 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLTAQLN*LPHSDC
Trigger: ACAGTCAGAATGGGGCAGCAAGTTCAACTGTGCAGT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp AAGGTCAGAGTTTGGTTCCTGGCCAGAGAGACTTTCTaGGGCTTCTCTCTTCCACCAGAAGACAAAAGGGTA +
Preference number: 3 (lower is better)
Translates to: KVRVWFLARETF*GFSLPPEDKRV
Trigger: TACCCTTTTGTCTTCTGGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATCTACATTAGAGGGTaGGCTCTTTGTCCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEIYIRG*ALCPCW
Trigger: CCAACAAGGACAAAGAGCCAACCCTCTAATGTAGAT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CAGGCTGACTGCACAGTTGAACTTGCTGCCCCATTCTaGCTGTTTGACTCTAATCCTCTTTGTTCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: QADCTVELAAPF*LFDSNPLCSPL
Trigger: AAGGGGAGAACAAAGAGGATTAGAGTCAAACAGTCAGAATGGGGCAGCAAGTTCAACTGTGCAGTCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp CACATCTACATTAGAGGGTTGGCTCTTTGTCCTTGTTaGGAACCCAAATGCTCTGCACGCTCCTGTAAGCTA +
Preference number: 3 (lower is better)
Translates to: HIYIRGLALCPC*EPKCSARSCKL
Trigger: TAGCTTACAGGAGCGTGCAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGGCTCTTTGTCCTTGTaGGGAACCCAAATGCTCTGC +
Preference number: 3 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSGSLSL*GTQMLC
Trigger: GCAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGACAAACAGAATTCCTaGCCTGTCTACTCGAACACT +
Preference number: 3 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLDKQNS*PVYSNT
Trigger: AGTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGTC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTTTTACTCACTGCCTTaGAGAAATCCCTGGATGTCA +
Preference number: 3 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLFYSLP*RNPWMS
Trigger: TGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAAA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTCTTTGGGGCTTTATTaGGGATTTTACTCACTGCCT +
Preference number: 3 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLSLGLY*GFYSLP
Trigger: AGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAGA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGCCTGGGTTTGCGTCTTaGTGCCTGTTTCCTACAAAG +
Preference number: 3 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGPGFAS*CLFPTK
Trigger: CTTTGTAGGAAACAGGCACAAAGACGCAAACCCAGG...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp AGTGAATCCTCATTCTCTCTGGGACATACTGGGTGCTaGAACCTGTGTGGCAAAAAGTGTGTCATCTCACTG +
Preference number: 3 (lower is better)
Translates to: SESSFSLGHTGC*NLCGKKCVISL
Trigger: CAGTGAGATGACACACTTTTTGCCACACAGGTTTCAGCACCCAGTATGTCCCAGAGAGAATGAGGATTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CGTGCTCAGGTCAAACGCTACAAGATGTGGTTAAGCTaGCAAACAGAATTCCTTGCCTGTCTACTCGAACAC +
Preference number: 3 (lower is better)
Translates to: RAQVKRYKMWLS*QTEFLACLLEH
Trigger: GTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGTCAGCTTAACCACATCTTGTAGCGTTTGACCTGAGCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp ATTCTCTCTGGGACATACTGGGTGCTGAAACCTGTGTaGCAAAAAGTGTGTCATCTCACTGTACTCATGCAG +
Preference number: 3 (lower is better)
Translates to: ILSGTYWVLKPV*QKVCHLTVLMQ
Trigger: CTGCATGAGTACAGTGAGATGACACACTTTTTGCCACACAGGTTTCAGCACCCAGTATGTCCCAGAGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp GTGGAAAGTGAAGTTTCAAGGGTAGTGAAAATGGCCTaGGAGATGGCTGAAATGAAGAGAGTTCAGAGCGAC +
Preference number: 3 (lower is better)
Translates to: VESEVSRVVKMA*EMAEMKRVQSD
Trigger: GTCGCTCTGAACTCTCTTCATTTCAGCCATCTCCCAGGCCATTTTCACTACCCTTGAAACTTCACTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp GATTCTCTGTGTCTACCTGTTATGTCTCTCCAATTTTaGGGGGCAGCAGTTTGCTCTGTGACTTCATGTCTC +
Preference number: 3 (lower is better)
Translates to: DSLCLPVMSLQF*GAAVCSVTSCL
Trigger: GAGACATGAAGTCACAGAGCAAACTGCTGCCCCCCAAAATTGGAGAGACATAACAGGTAGACACAGAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR TCA 72 bp TCCCAAGGATTCTATTTACCCTCTTTACTGTGTACCTaGCCTCACAGGGGCTACTCCTTATTACCAATGGCA +
Preference number: 3 (lower is better)
Translates to: SQGFYLPSLLCT*PHRGYSLLPMA
Trigger: TGCCATTGGTAATAAGGAGTAGCCCCTGTGAGGTCAGGTACACAGTAAAGAGGGTAAATAGAATCCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CCAGGCATCATAGCCATGCAAACTAGTAAACACAGTTaGGCAGACAATGGTCTCCGCATTCTAATGCCAGTT +
Preference number: 3 (lower is better)
Translates to: PGIIAMQTSKHS*ADNGLRILMPV
Trigger: AACTGGCATTAGAATGCGGAGACCATTGTCTGCTCAACTGTGTTTACTAGTTTGCATGGCTATGATGCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 72 bp CTACAAGATGTGGTTAAGCTGACAAACAGAATTCCTTaGCTGTCTACTCGAACACTAACACCCTGGGAGTTC +
Preference number: 3 (lower is better)
Translates to: LQDVVKLTNRIP*LSTRTLTPWEF
Trigger: GAACTCCCAGGGTGTTAGTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGTCAGCTTAACCACATCTTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp CATGGCTGCATTAGAAACACATCTACATTAGAGGGTTaGCTCTTTGTCCTTGTTGGGAACCCAAATGCTCTG +
Preference number: 3 (lower is better)
Translates to: HGCIRNTSTLEG*LFVLVGNPNAL
Trigger: CAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGATGTGTTTCTAATGCAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp CACTCTGTCCAGCTCTGTAGCCCCATACTTTCTCCCTaGGCTATTTATAGAAAGTGTATGGCTAGTGGAAAA +
Preference number: 3 (lower is better)
Translates to: HSVQLCSPILSP*AIYRKCMASGK
Trigger: TTTTCCACTAGCCATACACTTTCTATAAATAGCCCAGGGAGAAAGTATGGGGCTACAGAGCTGGACAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp ATTTACACAGTGTCCTTCTTCAATATCATGGTGTACTaGGAGAAGCAGGGCCATCTTTACAGCACGGCCAAA +
Preference number: 3 (lower is better)
Translates to: IYTVSFFNIMVY*EKQGHLYSTAK
Trigger: TTTGGCCGTGCTGTAAAGATGGCCCTGCTTCTCCCAGTACACCATGATATTGAAGAAGGACACTGTGTAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCTAACAGGAATCTCCTaGCACTTCACAAAGGATGAG +
Preference number: 3 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSLTGIS*HFTKDE
Trigger: CTCATCCTTTGTGAAGTGCAAGGAGATTCCTGTTAG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAGGCTGACTGCACAGTaGAACTTGCTGCCCCATTCT +
Preference number: 3 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRRLTAQ*NLLPHS
Trigger: AGAATGGGGCAGCAAGTTCAACTGTGCAGTCAGCCT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGTCAGTTTGTCTAGGCTaGTTCGCTTTTTGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGSVCLG*FAFCQV
Trigger: CACCTGACAAAAAGCGAACAAGCCTAGACAAACTGA...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CAGGGACATGCTCATGAATGTTTCAAGGATTTAGGGTaGCTGCCCATCATTTCCATAGTCTGGAACCAAATC +
Preference number: 3 (lower is better)
Translates to: QGHAHECFKDLG*LPIISIVWNQI
Trigger: GATTTGGTTCCAGACTATGGAAATGATGGGCAGTCACCCTAAATCCTTGAAACATTCATGAGCATGTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CAGGAATCTCCTTGCACTTCACAAAGGATGAGACACTaGCACTCGTCAACAACTGTGCAAAGTGTATTTACA +
Preference number: 3 (lower is better)
Translates to: QESPCTSQRMRH*HSSTTVQSVFT
Trigger: TGTAAATACACTTTGCACAGTTGTTGACGAGTGTCAGTGTCTCATCCTTTGTGAAGTGCAAGGAGATTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp TCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTaGATGCTTCCTTTTTCAGTTTGTCTAGGCTTGTTC +
Preference number: 3 (lower is better)
Translates to: SQKNTVVLSSNH*MLPFSVCLGLF
Trigger: GAACAAGCCTAGACAAACTGAAAAAGGAAGCATTCAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp AAGGTGCCTCACCTCTTTATTGCCTTGGTACTCAGTTaGTTGGCGAGAATAATTTTGTTCATAGCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: KVPHLFIALVLS*LARIILFIASR
Trigger: TCTGGAGGCTATGAACAAAATTATTCTCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR GCA 72 bp GATAAATGTACCACTCAAAATATACCTGGACACTCGTaGTCAGGTCAAACGCTACAAGATGTGGTTAAGCTG +
Preference number: 3 (lower is better)
Translates to: DKCTTQNIPGHS*SGQTLQDVVKL
Trigger: CAGCTTAACCACATCTTGTAGCGTTTGACCTGAGCACGAGTGTCCAGGTATATTTTGAGTGGTACATTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCATGGACCATGAAACCTaGATTTTCAGTCAGGTAAGA +
Preference number: 3 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSMDHET*IFSQVR
Trigger: TCTTACCTGACTGAAAATCAAGGTTTCATGGTCCAT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATGCCTTGAGTGCTTATaGCGTATTTTGGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRCLECL*RILGGG
Trigger: ACCTCCACCCAAAATACGCAATAAGCACTCAAGGCA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp AGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTTGGACCCAAGAAGAGTaGTTGATTTTTCAGTTCAGC +
Preference number: 3 (lower is better)
Translates to: RTWYWFLQKFLLVGSCSVWTQEE*LIFQFS
Trigger: GCTGAACTGAAAAATCAACAACTCTTCTTGGGTCCA...AACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR CAA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTTGCAGAAATTTCTTCTaGTGGGTTCCTGCTCTGTTA +
Preference number: 3 (lower is better)
Translates to: DNSNIPVISEPVLMLALFCRNFF*WVPALL
Trigger: TAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCA...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR TCA 72 bp CTTTGGGGCTTTATTTGGGATTTTACTCACTGCCTTTaGGAAATCCCTGGATGTCAAAGACATCACCTGAAT +
Preference number: 3 (lower is better)
Translates to: LWGFIWDFTHCL*EIPGCQRHHLN
Trigger: ATTCAGGTGATGTCTTTGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp GCTACGTTATTCACCATGCTTATAAACTCATCAAAGTaGAAGGTGCCTCACCTCTTTATTGCCTTGGTACTC +
Preference number: 3 (lower is better)
Translates to: ATLFTMLINSSK*KVPHLFIALVL
Trigger: GAGTACCAAGGCAATAAAGAGGTGAGGCACCTTTCACTTTGATGAGTTTATAAGCATGGTGAATAACGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp AAGAGTTTATTTACACAGTGTCCTTCTTCAATATCATaGTGTACTGGGAGAAGCAGGGCCATCTTTACAGCA +
Preference number: 3 (lower is better)
Translates to: KSLFTQCPSSIS*CTGRSRAIFTA
Trigger: TGCTGTAAAGATGGCCCTGCTTCTCCCAGTACACCATGATATTGAAGAAGGACACTGTGTAAATAAACTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp TGTTTGGAAATGGGTGAACCTCATAAGGCAGATGGTTaGAGAAGGCCTAAATACACATGGAATCCTTTTAGA +
Preference number: 3 (lower is better)
Translates to: CLEMGEPHKADG*RRPKYTWNPFR
Trigger: TCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATGAGGTTCACCCATTTCCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGATTGCCACATTACCTaGAAATGTGTAATAAACCTG +
Preference number: 3 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSDCHIT*KCVINL
Trigger: CAGGTTTATTACACATTTCAAGGTAATGTGGCAATC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTCAAAGCTCCATTCTTTaGACAAATCCAAGCATTCCT +
Preference number: 3 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPQSSIL*TNPSIP
Trigger: AGGAATGCTTGGATTTGTCAAAAGAATGGAGCTTTG...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTGCTTATTGCGTATTTaGGGTGGAGGTATAAGGCAT +
Preference number: 3 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNCLLRI*GGGIRH
Trigger: ATGCCTTATACCTCCACCCAAAATACGCAATAAGCA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp TATTCTTACTACTCTCCCCATGTAAGAAACTGTGTTTaGGGACCAGTCATTTGGACTTTGCTTCAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: YSYYSPHVRNCV*GPVIWTLLQKA
Trigger: TGCCTTTTGAAGCAAAGTCCAAATGACTGGTCCTCAAACACAGTTTCTTACATGGGGAGAGTAGTAAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp AGAAATCTTTTCTCTTCAAGCTGGATATGTGGAAAGTaGAGTTTCAAGGGTAGTGAAAATGGCCTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: RNLFSSSWICGK*SFKGSENGLGD
Trigger: ATCTCCCAGGCCATTTTCACTACCCTTGAAACTTCACTTTCCACATATCCAGCTTGAAGAGAAAAGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CCA 72 bp GAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTaGGTTCCTGCTCTGTTAAATTGTGATTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: ELGTGSCRNFFL*VPALLNCDSLC
Trigger: ACACAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTACTGCCAAAATAGGTaGTACATAGATAATGGACTG +
Preference number: 3 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPYCQNR*YIDNGL
Trigger: CAGTCCATTATCTATGTACAACCTATTTTGGCAGTA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGACGACTATCCCCTCACTaGGATTGTACATTACATTTT +
Preference number: 3 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRRLSPH*DCTLHF
Trigger: AAAATGTAATGTACAATCCAAGTGAGGGGATAGTCG...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CAGGGAACAAAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTACCCAAGAAGAGTTGTaGATTTTTCAGTTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: QGTKELGTGSCRNFFLWVTQEEL*IFQFSF
Trigger: AAAGCTGAACTGAAAAATCAACAACTCTTCTTGGGT...AACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR GCA 72 bp AAACTCATCAAAGTGAAAGGTGCCTCACCTCTTTATTaGCTTGGTACTCAGTTGATTGGCGAGAATAATTTT +
Preference number: 3 (lower is better)
Translates to: KLIKVKGASPLY*LGTQLIGENNF
Trigger: AAAATTATTCTCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCACCTTTCACTTTGATGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATATCCCCTCACTTGGATaGTACATTACATTTTCAAGT +
Preference number: 3 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNIPSLG*YITFSS
Trigger: ACTTGAAAATGTAATGTACAATCCAAGTGAGGGGAT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp CTACTAGGTCTTTATCATTTGAGTAAGAGCTCAAGGTaGTTAAACTCACCGGATAAAGATGAGTCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: LLGLYHLSKSSR*LNSPDKDESFQ
Trigger: TTGGAAAGACTCATCTTTATCCGGTGAGTTTAATCACCTTGAGCTCTTACTCAAATGATAAAGACCTAGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp ATATTTATAGATCCTACCCTCAAAACAGATAGACAGTaGGGTAGGGATGAACTAATGCAGTCAATCACTGAA +
Preference number: 3 (lower is better)
Translates to: IFIDPTLKTDRQ*GRDELMQSITE
Trigger: TTCAGTGATTGACTGCATTAGTTCATCCCTACCTCACTGTCTATCTGTTTTGAGGGTAGGATCTATAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR-3UTR CAA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTAGTTCAGCTTTTTACTaGTTAAGATGGAGTGACAAC +
Preference number: 3 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSSSAFY*LRWSDN
Trigger: GTTGTCACTCCATCTTAACAAGTAAAAAGCTGAACT...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR TCA 72 bp ATCCTGATTTCCACAGTTGTCCTTGAATGCATCTATTaGATTAAGTTACAGCTGAGGAATAACATCTGTTGT +
Preference number: 3 (lower is better)
Translates to: ILISTVVLECIY*IKLQLRNNICC
Trigger: ACAACAGATGTTATTCCTCAGCTGTAACTTAATTCAATAGATGCATTCAAGGACAACTGTGGAAATCAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp GTAAAAACTAGGCCATTAGCTTCACTCAGGTCATCCTaGAGTAGTAAAGTAGCTCTTAGAGAATTACATTTT +
Preference number: 3 (lower is better)
Translates to: VKTRPLASLRSS*SSKVALRELHF
Trigger: AAAATGTAATTCTCTAAGAGCTACTTTACTACTTCAGGATGACCTGAGTGAAGCTAATGGCCTAGTTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR CCA 72 bp AAACAAGTCATCTCAGTGGTTTGTGTTAATCTAGAGTaGCCATCTCAATTACAGGTTAGCATTTGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: KQVISVVCVNLE*PSQLQVSICKK
Trigger: TTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAACACAAACCACTGAGATGACTTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR TCA 72 bp TTATGCTTTCCAACTAGAGATGGAACTAAGAAGAAATaGAATTGTGTCCCCATGCTTTATCTAGAAACAAGA +
Preference number: 3 (lower is better)
Translates to: LCFPTRDGTKKK*NCVPMLYLETR
Trigger: TCTTGTTTCTAGATAAAGCATGGGGACACAATTTCATTTCTTCTTAGTTCCATCTCTAGTTGGAAAGCATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACGCAGCGACAGGCAGCTaGACACGTGCGCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDAATGS*TRAPCS
Trigger: GCTGCACGGCGCACGTGTTCAGCTGCCTGTCGCTGC...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGGCACTCCTGGGCCGTaGACGGCAGACGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLGTPGP*TADAGS
Trigger: GCTACCGGCGTCTGCCGTGCACGGCCCAGGAGTGCC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCGCCGGGGGCGTCGCTaGAGGTTTAGGAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLERRGRR*RFRRRP
Trigger: GGGTCTTCTCCTAAACCTGCAGCGACGCCCCCGGCG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCGCGTGCAGTCCACGTaGCAGCCCAGGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFRVQST*QPRRCC
Trigger: GCAGCAGCGCCTGGGCTGGCACGTGGACTGCACGCG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACGGCGCCTGGAGGAACTaGCGCAGGCCCTCTTCTACG +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDGAWRN*RRPSST
Trigger: CGTAGAAGAGGGCCTGCGCCAGTTCCTCCAGGCGCC...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTGCAGCAGGCCACAGTaGAAGCCACCGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLECSRPQ*KPPPAR
Trigger: TCGTGCTGGCGGTGGCTTGCACTGTGGCCTGCTGCA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAGCAGCCACGGGTGGTaGAAGGGCACGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGSSHGW*KGTSPP
Trigger: CGGCGGCGACGTGCCCTTCCACCACCCGTGGCTGCT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCGAAGCCGTAGTAGCTaGTGGACGCGTAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLERSRSS*WTRSPG
Trigger: ACCTGGACTACGCGTCCATCAGCTACTACGGCTTCG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTGGCATCCAGCAAGCTaGGGCCTGGCAACAGGTAGT +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDWHPAS*GLATGS
Trigger: ACTACCTGTTGCCAGGCCTCAGCTTGCTGGATGCCA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACGTCATCCTCTTCACCTaGGCTGCAAGAACGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDVILFT*AARTAG
Trigger: CCCTGCCGTTCTTGCAGCTCAGGTGAAGAGGATGAC...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGATTAATAGGCAGCGCTaGGACCGCCAGGAGCGCGGA +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLINRQR*DRQERG
Trigger: TCCGCGCTCCTGGCGGTCGCAGCGCTGCCTATTAAT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTGCCAGCCCAGGCGCTaGTGCAAGTATGGAGTCATG +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDCQPRR*CKYGVM
Trigger: CATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACAAAGACCCGGCTGGATaGGCTCGGGGATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDKDPAG*ARGSCS
Trigger: TGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTT...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTCTTCAAAACCCGAGAAAGTGGGTaGGGCAGGCGGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PTSLSYLSLFSCLLCFFKTRESG*GRRRLE
Trigger: CTCCAGGCGCCGCCTGCCGCACCCACTTTCTCGGGT...TTTGAAGAAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTCGAAAAGACCCGGCTaGATGCGCTCGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLESKRPG*MRSGIL
Trigger: CAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACAGCAGCGGGATGAAGTaGGTCCAGAAGTTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDSSGMK*VQKLSV
Trigger: GACGCTCAACTTCTGGACGCACTTCATCCCGCTGCT...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAGGCAGCTGAACACGTaGGCCGTGCAGCTCATGGCG +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKARQLNT*AVQLMA
Trigger: CGCCATGAGCTGCACGGCGCACGTGTTCAGCTGCCT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGAGTAGTAGGCCACCGTaGTGCCGAAGCCGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLSSRPP*CRSRSS
Trigger: GCTACTACGGCTTCGGCAGCACGGTGGCCTACTACT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTCTTCAAAGGCGCCTGGAGGAACTaGCGCAGGCCCTCTTCTACG +
Preference number: 4 (lower is better)
Translates to: PTSLSYLSLFSCLLCFFKGAWRN*RRPSST
Trigger: CGTAGAAGAGGGCCTGCGCCAGTTCCTCCAGGCGCC...TTTGAAGAAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
3UTR CAA 72 bp GACTTACGGCATTCTACCTACAGCCAAGGTCAGAGTTaGGTTCCTGGCCAGAGAGACTTTCTGGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DLRHSTYSQGQS*VPGQRDFLGLL
Trigger: GAGAAGCCCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGCTGTAGGTAGAATGCCGTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTCACCTACAAGCCAGTaGAGTACAGCTGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLESPTSQ*STAGWV
Trigger: TACCCAGCCAGCTGTACTTCACTGGCTTGTAGGTGA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTTTAGGAGAAGACCCGTaGCTCCGAGCAGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKALGEDP*LRAAAP
Trigger: AGGAGCGGCTGCTCGGAGGCACGGGTCTTCTCCTAA...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTACCCGAGAAAGTGGGTaGGGCAGGCGGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPTRESG*GRRRLE
Trigger: CTCCAGGCGCCGCCTGCCGCACCCACTTTCTCGGGT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGGCCAAGGTCAGAGTTTaGTTCCTGGCCAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEAKVRV*FLARET
Trigger: AGTCTCTCTGGCCAGGAACCAAACTCTGACCTTGGC...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAGSCSR*RRRPPP
Trigger: TGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCC...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTTCATTTTCCAGGCATaGCTCTATGGCGCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLFIFQA*LYGAAP
Trigger: AGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGGCCTGGGAGATGGCTaGAATGAAGAGAGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLGLGDG*NEESSE
Trigger: CTCTGAACTCTCTTCATTTCAGCCATCTCCCAGGCC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACCGTCGGAGCCTTTGTaGCCACGCCGGGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLPSEPL*PRRGRR
Trigger: GCGACGCCCCCGGCGTGGGCACAAAGGCTCCGACGG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGCCAGAGAGACTTTCTaGGGCTTCTCTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLARETF*GFSLPP
Trigger: TGGTGGAAGAGAGAAGCCCCAGAAAGTCTCTCTGGC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp CCCTGCCAACCTCCCTACTTCAAAGCCTCCAGTGGGTaGGGATCCCTTTGTAGCAGTGAACTTTTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: PCQPPYFKASSG*GSLCSSELFPY
Trigger: ATAGGGAAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGGAGGTTGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGGTAGCCCGACAGGATaGAGCACTCCACGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSGSPTG*STPRSR
Trigger: ACGACTTCGTGGAGTGCTTCATCCTGTCGGGCTACC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTGCGCCGTGCAGCTCATaGCGAAGGTCAGCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPAPCSS*RRSAAL
Trigger: GAGTGCTGCTGACCTTCGCCATGAGCTGCACGGCGC...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGACAGTACCCGAGAAAGTaGGTGCGGCAGGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRQYPRK*VRQAAP
Trigger: AGGCGCCGCCTGCCGCACCCACTTTCTCGGGTACTG...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCCAGTGAAGTACAGCTaGCTGGGTATGAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSPVKYS*LGMRAT
Trigger: GGTGGCCCTCATACCCAGCCAGCTGTACTTCACTGG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCTCTCTGGGACATACTaGGTGCTGAAACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFLSGTY*VLKPVW
Trigger: CCACACAGGTTTCAGCACCCAGTATGTCCCAGAGAG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTCAGAGTTTGGTTCCTaGCCAGAGAGACTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLSEFGS*PERLSG
Trigger: CCCAGAAAGTCTCTCTGGCCAGGAACCAAACTCTGA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCACAGACGGCAGAACTTaGTCAGGAACAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSTDGRT*SGTAAA
Trigger: CGCTGCTGCTGTTCCTGAGCAAGTTCTGCCGTCTGT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCAGCCCAGGCGCTGCTaGAAGTATGGAGTCATGACT +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSQPRRC*KYGVMT
Trigger: AGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTGTTGGGAACCCAAATaGTCTGCACGCTCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFCWEPK*SARSCK
Trigger: CTTACAGGAGCGTGCAGAGCATTTGGGTTCCCAACA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGGCCTTGAGTGCTTATTaGGTATTTTGGGTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEALSAY*VFWVEV
Trigger: TACCTCCACCCAAAATACGCAATAAGCACTCAAGGC...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAGAGGCTAGGCACTCCTaGGCCGTGCACGGCAGACGC +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLEARHS*AVHGRR
Trigger: GCGTCTGCCGTGCACGGCCCAGGAGTGCCTAGCCTC...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAGGTAGCAGCCACGGGTaGTGGAAGGGCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIGSSHG*WKGTSP
Trigger: CGGCGACGTGCCCTTCCACCACCCGTGGCTGCTACC...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTCAGTACCCGAGAAAGTaGGTGCGGCAGGCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSQYPRK*VRQAAP
Trigger: AGGCGCCGCCTGCCGCACCCACTTTCTCGGGTACTG...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCATCTTCTGCCCTCCTaGATGGACCATGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFHLLPS*MDHETL
Trigger: CAAGGTTTCATGGTCCATCCAGGAGGGCAGAAGATG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGGTGCTGAAACCTGTGTaGCAAAAAGTGTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEVLKPV*QKVCHL
Trigger: GAGATGACACACTTTTTGCCACACAGGTTTCAGCAC...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCGAACACTAACACCCTaGGAGTTCACATGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLERTLTP*EFTCFS
Trigger: AGAAAAGCATGTGAACTCCCAGGGTGTTAGTGTTCG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGGCATGAGGGAAAGGTaGCCTGTCACTTTTACACAT +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLGMRER*PVTFTH
Trigger: ATGTGTAAAAGTGACAGGCCACCTTTCCCTCATGCC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGAATATCATGGTGTACTaGGAGAAGCAGGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLENIMVY*EKQGHL
Trigger: AAGATGGCCCTGCTTCTCCCAGTACACCATGATATT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: LGTGSCRNFFLWVPALLNGSCSR*RRRPPP
Trigger: TGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCC...ATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTAAGGGAAGAGGAAAGTaGATCCTCATTCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFKGRGK*ILILSG
Trigger: CCCAGAGAGAATGAGGATTCACTTTCCTCTTCCCTT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGCCAACTAAGTCAGTCTaGGTCAGCCCCAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGPTKSV*VSPRDQ
Trigger: TTGGTCTCTGGGGCTGACTCAGACTGACTTAGTTGG...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTTTACAAGCCAGTCATaGCATGACCGAGGAACTCAT +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLFTSQS*HDRGTH
Trigger: ATGAGTTCCTCGGTCATGTCATGACTGGCTTGTAAA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTACTAGTAAACACAGTTaGGCAGACAATGGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFTSKHS*ADNGLR
Trigger: GCGGAGACCATTGTCTGCTCAACTGTGTTTACTAGT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGCTCAGCTCCAACCACTaGATGCTTCCTTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLLSSNH*MLPFSV
Trigger: AACTGAAAAAGGAAGCATTCAGTGGTTGGAGCTGAG...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTAGTCGGTACGGCTCTTaGAGCAGGCCACAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPSRYGS*SRPQCK
Trigger: CTTGCACTGTGGCCTGCTGCAAGAGCCGTACCGACT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTTTTCCCTATGGTTTTaGAGCACCTTCCTTGAGCAA +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDFSLWF*STFLEQ
Trigger: TTGCTCAAGGAAGGTGCTGCAAAACCATAGGGAAAA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGGCTCCAACCACTGAATaGTTCCTTTTTCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEAPTTE*FLFQFV
Trigger: GACAAACTGAAAAAGGAAGCATTCAGTGGTTGGAGC...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGGCGCTGCTGCAAGTATaGAGTCATGACTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGALLQV*SHDSGI
Trigger: GATGCCAGAGTCATGACTCCATACTTGCAGCAGCGC...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTATGTGGAAGAGCTGGTaGCTGTGGCCGATAATGTCG +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLAMWKSW*LWPIMS
Trigger: CGACATTATCGGCCACAGCCACCAGCTCTTCCACAT...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAAGCCTCCAGTGGGTTaGGATCCCTTTGTAGCAGTG +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGKPPVG*DPFVAV
Trigger: CACTGCTACAAAGGGATCCCAACCCACTGGAGGCTT...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGCCTTTGAGAAATCCCTaGATGTCAAAGACATCACCT +
Preference number: 4 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEPLRNP*MSKTSP
Trigger: AGGTGATGTCTTTGACATCCAGGGATTTCTCAAAGG...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATATATCTCCCTCCCGCTTaGCCACCCCTGCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIYLPPA*PPLPTS
Trigger: GGAGGTTGGCAGGGGTGGTCAAGCGGGAGGGAGATA...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTACCAATGGCACAGATaGTTGGAAAAGCAAACTCTT +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDYQWHR*LEKQTL
Trigger: AAGAGTTTGCTTTTCCAATCATCTGTGCCATTGGTA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTGGCTTCTAACAAAATaGCCTACCAGGAAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFWLLTK*PTRKCG
Trigger: ACCACACTTCCTGGTAGGTCATTTTGTTAGAAGCCA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCAATTAACAGCTAAATaGGCATTCTTGGCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFQLTAK*AFLAPD
Trigger: GTCAGGGGCCAAGAATGCTCATTTAGCTGTTAATTG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCATCCCTGTCATATCTaGGCCTGTTCTCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLAHPCHI*ACSHAC
Trigger: GCAAGCATGAGAACAGGCTCAGATATGACAGGGATG...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp TCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTGAAAGACCCGGCTGGATaGGCTCGGGGATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCRNFFLWVPALLNCDSLKDPAG*ARGSCS
Trigger: TGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTT...CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTACCTGGATAGTTCCGTaGAAATGGGGAGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFTWIVP*KWGDSK
Trigger: CTTTGAATCTCCCCATTTGCACGGAACTATCCAGGT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTATAATGCCCTTTACTaGAAAAGGGGACCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFYNALY*KRGPAG
Trigger: ACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTATA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCAGCAAGCTGAGGCCTaGCAACAGGTAGTAGTAGTA +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSQQAEA*QQVVVV
Trigger: TACTACTACTACCTGTTGCCAGGCCTCAGCTTGCTG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAGTGCACGAAGAGTGTaGGGTTCTCCCCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNSARRV*GSPHAG
Trigger: ACCTGCGTGGGGAGAACCCCACACTCTTCGTGCACT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACCCCATACTTTCTCCCTaGGCTATTTATAGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDPILSP*AIYRKC
Trigger: ACACTTTCTATAAATAGCCCAGGGAGAAAGTATGGG...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTGGTGTAGGTAAGGACTaGAGTAAGGGTAGCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFGVGKD*SKGSLK
Trigger: TTTTAGGCTACCCTTACTCCAGTCCTTACCTACACC...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTGCAAGTATGGAGTCATaGCTCTGGCATCCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPASMES*LWHPAS
Trigger: GCTTGCTGGATGCCAGAGTCATGACTCCATACTTGC...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAGGGGCAAGAACAAGTaGCTATCTCCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNRGKNK*LSPSRL
Trigger: CAAGCGGGAGGGAGATAGTCACTTGTTCTTGCCCCT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTTTACTCACTGCCTTTaGGAAATCCCTGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFFTHCL*EIPGCQ
Trigger: TTGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTCTTTACTGTGTACCTaGCCTCACAGGGGCTACTCC +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPSLLCT*PHRGYS
Trigger: GGAGTAGCCCCTGTGAGGTCAGGTACACAGTAAAGA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTCAAGCAGCTTCCCCTaGTGTCCAGTTCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSSSSFP*CPVQVY
Trigger: ATACACTTGAACTGGACATCAGGGGAAGCTGCTTGA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAGACCAACCCACGGGGTaGCAGGCACCGAAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIDQPTG*QAPKSN
Trigger: GTTTGACTTCGGTGCCTGTCACCCCGTGGGTTGGTC...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCAGCAGTTTGCTCTGTaGCTTCATGTCTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLAQQFAL*LHVSDG
Trigger: TCCATCAGAGACATGAAGTCACAGAGCAAACTGCTG...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGGGGTTTGCGTCTTTGTaGCTGTTTCCTACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGGFASL*LFPTKL
Trigger: GAGCTTTGTAGGAAACAGGCACAAAGACGCAAACCC...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCATCAAAGTGAAAGGTaGCTCACCTCTTTATTGCCT +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFHQSER*LTSLLP
Trigger: AGGCAATAAAGAGGTGAGGCACCTTTCACTTTGATG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTAGTGCACGAAGAGTGTaGGGTTCTCCCCACGCAGGT +
Preference number: 4 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSSARRV*GSPHAG
Trigger: ACCTGCGTGGGGAGAACCCCACACTCTTCGTGCACT...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp GTTCACTTCTGCCCACCTTTCAGTTTTCCACATATATTTTTACAACTGCAAAGTTCGAAAAGACCCGGCTaGATGCGCTCGGGGATCTTG +
Preference number: 4 (lower is better)
Translates to: VHFCPPFSFPHIFLQLQSSKRPG*MRSGIL
Trigger: CAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGA...ACTTTGCAGTTGTAAAAATATATGTGGAAAACTGAAAGGTGGGCAGAAGTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGTTAAGCAAGGATGGATaGCATCAGTCTAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLLSKDG*HQSRTS
Trigger: AGAAGTTCTAGACTGATGCCATCCATCCTTGCTTAA...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCCAGGCATGACTCTATaGCGCCGCTCCTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNPGMTL*RRSLRC
Trigger: ACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTTAATCCTGTCACCTTaGACCAACTATAAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDLILSP*TNYKAL
Trigger: CAAAGCTTTATAGTTGGTCCAAGGTGACAGGATTAA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGCAGTTGAGCAGACAATaGTCTCCGCATTCTAATGCC +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGQLSRQ*SPHSNA
Trigger: GGCATTAGAATGCGGAGACCATTGTCTGCTCAACTG...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTCATAAGGCAGATGGTTaGAGAAGGCCTAAATACACA +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFHKADG*RRPKYT
Trigger: TGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTCTGTGACTTCATGTCTCTGATGGACCCAAGAAGAGTTGTTGATTTTTCAGTTTGTTTAGGAACTTCCTaGTTACCAGCCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LCDFMSLMDPRRVVDFSVCLGTS*LPAPGR
Trigger: TCTGCCTGGGGCTGGTAATCAGGAAGTTCCTAAACA...AACTGAAAAATCAACAACTCTTCTTGGGTCCATCAGAGACATGAAGTCACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTGTAAGAAACTGTGTTTaGGGACCAGTCATTTGGACT +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAVRNCV*GPVIWT
Trigger: AGTCCAAATGACTGGTCCTCAAACACAGTTTCTTAC...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATATGGCGCCGCTCCTTaGGATGTCATCCAGATCATG +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRYGAAP*DVIQIM
Trigger: CATGATCTGGATGACATCTCAAGGAGCGGCGCCATA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAGGGAGATGGCTGAAATaGAGAGAGTTCAGAGCGACC +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQGRWLK*REFRAT
Trigger: GGTCGCTCTGAACTCTCTTCATTTCAGCCATCTCCC...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTGGATATGTGGAAAGTaGAGTTTCAAGGGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFWICGK*SFKGSE
Trigger: TTCACTACCCTTGAAACTTCACTTTCCACATATCCA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTCAATCCAATCTTCCGTaGTTTGTCCCCTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: DNSNIPVISEPVLMLALFQSNLP*FVPLAE
Trigger: TTCTGCCAAGGGGACAAATCACGGAAGATTGGATTG...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp CCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTCTTCAAAGGAGCAGGCAGGATGTaGAACCTCTTATTAATCCTA +
Preference number: 4 (lower is better)
Translates to: PTSLSYLSLFSCLLCFFKGAGRM*NLLLIL
Trigger: TAGGATTAATAAGAGGTTTCACATCCTGCCTGCTCC...TTTGAAGAAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAACCAACACCATCTTCTaGCCTCCTGGATGGACCATG +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQTNTIF*PPGWTM
Trigger: CATGGTCCATCCAGGAGGGCAGAAGATGGTGTTGGT...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACTATATGGTACCTATTTaGAAACATGAAGTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDYMVPI*KHEVKP
Trigger: TGGCTTCACTTCATGTTTGCAAATAGGTACCATATA...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCACTCAAAATATACCTaGACACTCGTGCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSHSKYT*TLVLRS
Trigger: TGACCTGAGCACGAGTGTCCAGGTATATTTTGAGTG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTGAGAAATGCCATGTTTaGAATAGCTTCCAGAGATTG +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFEKCHV*NSFQRL
Trigger: CAATCTCTGGAAGCTATTCCAAACATGGCATTTCTC...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp GTACAAATTAGCCTCTGTAACCTAACAGGAATCTCCTaGCACTTCACAAAGGATGAGACACTGACACTCGTC +
Preference number: 4 (lower is better)
Translates to: VQISLCNLTGIS*HFTKDETLTLV
Trigger: GACGAGTGTCAGTGTCTCATCCTTTGTGAAGTGCAAGGAGATTCCTGTTAGGTTACAGAGGCTAATTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATGTTTAGGAACTTCCTaGTTACCAGCCCCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQCLGTS*LPAPGR
Trigger: TCTGCCTGGGGCTGGTAATCAGGAAGTTCCTAAACA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTCAAAGGATGAGACACTaGCACTCGTCAACAACTGTG +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPQRMRH*HSSTTV
Trigger: CACAGTTGTTGACGAGTGTCAGTGTCTCATCCTTTG...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCATGTGGAAATATCCTaGTTTCCACAGTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSHVEIS*FPQLSL
Trigger: CAAGGACAACTGTGGAAATCAGGATATTTCCACATG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTCAGCTCAAAGATTGCTaGCAGAGTGAAGTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPQLKDC*QSEVSS
Trigger: ACTGCTGACTTCACTCTGTCAGCAATCTTTGAGCTG...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTAAAGAAATTGATTGCTaGGGAAGTCAGCATGTGAAT +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFKEIDC*GSQHVN
Trigger: ATTCACATGCTGACTTCCTCAGCAATCAATTTCTTT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAGTAAGAGCTCAAGGTaGTTAAACTCACCGGATAAA +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKASKSSR*LNSPDK
Trigger: TTTATCCGGTGAGTTTAATCACCTTGAGCTCTTACT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTATAAACTCATCAAAGTaGAAGGTGCCTCACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAINSSK*KVPHLF
Trigger: AAAGAGGTGAGGCACCTTTCACTTTGATGAGTTTAT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGTGGACTCAATCCAATCTTCCGTaGTTTGTCCCCTTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVGIGWLTNSLEELQEWTQSNLP*FVPLAE
Trigger: TTCTGCCAAGGGGACAAATCACGGAAGATTGGATTG...AGTCCACTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR GCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACCGCTTGACCACCCCTaGCAACCTCCCTACTTCAAA +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLPLDHP*QPPYFK
Trigger: TTTGAAGTAGGGAGGTTGGCAGGGGTGGTCAAGCGG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAGTTAAGCCCTGGGTTTaGGTCTTTGTGCCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQVKPWV*VFVPVS
Trigger: GGAAACAGGCACAAAGACGCAAACCCAGGGCTTAAC...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTACAAAGAAAATTCAGTaGGTACCACAGGCTTTGATA +
Preference number: 4 (lower is better)
Translates to: PYFKASSGLGSLCSSELFTKKIQ*VPQALI
Trigger: TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTATACCTGGACACTCGTaGTCAGGTCAAACGCTACAA +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPIPGHS*SGQTLQ
Trigger: TTGTAGCGTTTGACCTGAGCACGAGTGTCCAGGTAT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGGCCTCACCTCTTTATTaGCTTGGTACTCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGASPLY*LGTQLI
Trigger: AATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGC...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTGCCTGTTCTCATGCTTaGTCTGTTTCTTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLAACSHA*SVSSNC
Trigger: ACAGTTTGAAGAAACAGAGCAAGCATGAGAACAGGC...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp CAGGGAACAAAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTAAGAGCTGGTGGCTGTaGCCGATAATGTCGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QGTKELGTGSCRNFFLWVKSWWL*PIMSKR
Trigger: TCTTTTCGACATTATCGGCCACAGCCACCAGCTCTT...AACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAGAGAATTCTGTCTGTaGACCTGGAAGAACAACAAA +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAREFCL*TWKNNK
Trigger: TTTGTTGTTCTTCCAGGTCCACAGACAGAATTCTCT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCAAGGTGATGTACAATTaGCTGGTGCTATCCCGTAAT +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSKVMYN*LVLSRN
Trigger: ATTACGGGATAGCACCAGCCAATTGTACATCACCTT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCACCTCTTTATTGCCTTaGTACTCAGTTGATTGGCGA +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSTSLLP*YSVDWR
Trigger: TCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp CACCATCTTCTGCCCTCCTGGATGGACCATGAAACCTaGATTTTCAGTCAGGTAAGAAAAGCTTATTCTTAC +
Preference number: 4 (lower is better)
Translates to: HHLLPSWMDHET*IFSQVRKAYSY
Trigger: GTAAGAATAAGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAGAAGATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp AAAGGTGCCTCACCTCTTTATTGCCTTGGTACTCAGTaGATTGGCGAGAATAATTTTGTTCATAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGASPLYCLGTQ*IGENNFVHSLQ
Trigger: CTGGAGGCTATGAACAAAATTATTCTCGCCAATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAAGCCAGTCATGACATaGCCGAGGAACTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRKPVMT*PRNSFP
Trigger: AGGAAATGAGTTCCTCGGTCATGTCATGACTGGCTT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp AAACTAGCCTGTTTGAAAAGTAGACCTTCTGTGCTAGGTTTTGCTGGAAGAGGGCCAACTATAAAGCTTTaGAATGGAGATAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLACLKSRPSVLGFAGRGPTIKL*NGDNSH
Trigger: GTGGGAGTTATCTCCATTTCAAAGCTTTATAGTTGG...CCCTCTTCCAGCAAAACCTAGCACAGAAGGTCTACTTTTCAAACAGGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTTCAAGCTGCAGAGTTTaGGTGGGTGTTTATTTGATC +
Preference number: 4 (lower is better)
Translates to: DNSNIPVISEPVLMLALFSSCRV*VGVYLI
Trigger: GATCAAATAAACACCCACTCAAACTCTGCAGCTTGA...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp AAGTCCTTCAGCTATACCGGTATAGATGCTCTATCTTCACTCTTTGAGAAAATTGAACCAGGAAGCCACTaGCCAAAGTCCTTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KSFSYTGIDALSSLFEKIEPGSH*PKSFSY
Trigger: ATAGCTGAAGGACTTTGGTCAGTGGCTTCCTGGTTC...AATTTTCTCAAAGAGTGAAGATAGAGCATCTATACCGGTATAGCTGAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCAACTTCTCCCATGGCTaGATTAGAAACACATCTACA +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSNFSHG*IRNTST
Trigger: TGTAGATGTGTTTCTAATGCAGCCATGGGAGAAGTT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAAAAACTCAGGCTGACTaGACAGTTGAACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQKTQAD*TVELAA
Trigger: GGCAGCAAGTTCAACTGTGCAGTCAGCCTGAGTTTT...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCACAAACAGAATTCCTTaGCTGTCTACTCGAACACTA +
Preference number: 4 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSTNRIP*LSTRTL
Trigger: TAGTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGT...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTCTGAGCCTGTTCTCATaGTTGCTCTGTTTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: DNSNIPVISEPVLMLALFLSLFS*LLCFFK
Trigger: TTTGAAGAAACAGAGCAAGCATGAGAACAGGCTCAG...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp TTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGTGGGAGGAGACTGCCTTCTaGTGCTTTTTGTTCCAATCC +
Preference number: 4 (lower is better)
Translates to: LLVGIGWLTNSLEELQEWEETAF*CFLFQS
Trigger: GGATTGGAACAAAAAGCAGCAGAAGGCAGTCTCCTC...CCACTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAAGAGCTGGTGGCTGTaGCCGATAATGTCGAAAAGA +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRKSWWL*PIMSKR
Trigger: TCTTTTCGACATTATCGGCCACAGCCACCAGCTCTT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAATGTGGAAGAGCTGGTaGCTGTGGCCGATAATGTCG +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLMWKSW*LWPIMS
Trigger: CGACATTATCGGCCACAGCCACCAGCTCTTCCACAT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATATGTTAGTCCATGCCTaGAAGCTCACGTATCCTGAG +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNMLVHA*KLTYPE
Trigger: CTCAGGATACGTGAGCTTCCAGGCATGGACTAACAT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp TCTTTGGGGCTTTATTTGGGATTTTACTCACTGCCTTaGAGAAATCCCTGGATGTCAAAGACATCACCTGAA +
Preference number: 4 (lower is better)
Translates to: SLGLYLGFYSLP*RNPWMSKTSPE
Trigger: TTCAGGTGATGTCTTTGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp TCCCCATGTAAGAAACTGTGTTTGAGGACCAGTCATTaGGACTTTGCTTCAAAAGGCACATTTATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SPCKKLCLRTSH*DFASKGTFIPV
Trigger: CACTGGAATAAATGTGCCTTTTGAAGCAAAGTCCAAATGACTGGTCCTCAAACACAGTTTCTTACATGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGACTCCTGGATGGACCATaGAACCTTGATTTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRLLDGP*NLDFQS
Trigger: TGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAG...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAGGACATACTGGGTGCTaGAACCTGTGTGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLGHTGC*NLCGKK
Trigger: CTTTTTGCCACACAGGTTTCAGCACCCAGTATGTCC...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTAAGATGTGGTTAAGCTaGCAAACAGAATTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPKMWLS*QTEFLA
Trigger: GGCAAGGAATTCTGTTTGTCAGCTTAACCACATCTT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTGCTGATAGTGGACTTCTaGGAAAGGGAAGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SCRNFFLWVPALLNCDSLLIVDF*EREERK
Trigger: CTTTCTCTCTTCCCTTTCTCAGAAGTCCACTATCAG...CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTAATGCAGTCAATCACTaGATTAATAAGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLANAVNH*INKSWS
Trigger: ACTCCAGCTCTTATTAATTCAGTGATTGACTGCATT...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTCAGTCATTTGGACTTTaGTTCAAAAGGCACATTTAT +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAQSFGL*FKRHIY
Trigger: ATAAATGTGCCTTTTGAAGCAAAGTCCAAATGACTG...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATACCACATGTTAGTCCATaGCTGGAAGCTCACGTATCC +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIPHVSP*LEAHVS
Trigger: GGATACGTGAGCTTCCAGGCATGGACTAACATGTGG...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTCTACATTAGAGGGTTaGCTCTTTGTCCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNSTLEG*LFVLVG
Trigger: CCCAACAAGGACAAAGAGCCAACCCTCTAATGTAGA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAATTTTATCCTTAAGTaGCCTCTCCTTAAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKANFILK*PLLKVK
Trigger: TTTGACCTTAAGGAGAGGCCACTTAAGGATAAAATT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CTGCCCTCCTGGATGGACCATGAAACCTTGATTTTCAGTCAGGTAAGAAAAGCTAAAATGCCTACAAACTaGTTAGAAATCTGCAAACCA +
Preference number: 4 (lower is better)
Translates to: LPSWMDHETLIFSQVRKAKMPTN*LEICKP
Trigger: TGGTTTGCAGATTTCTAACCAGTTTGTAGGCATTTT...AGCTTTTCTTACCTGACTGAAAATCAAGGTTTCATGGTCCATCCAGGAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCCTTCTTCAATATCATaGTGTACTGGGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNPSSIS*CTGRSR
Trigger: CCTGCTTCTCCCAGTACACCATGATATTGAAGAAGG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAGTAGTGAAAATGGCCTaGGAGATGGCTGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRVVKMA*EMAEMK
Trigger: CTTCATTTCAGCCATCTCCCAGGCCATTTTCACTAC...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATTCACAGTTGTATCATaGCACACGCCTTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQFTVVS*HTPSEN
Trigger: GTTTTCTGAAGGCGTGTGTCATGATACAACTGTGAA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAGCACTTCACAAAGGATaGGACACTGACACTCGTCAA +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIALHKG*DTDTRQ
Trigger: TTGACGAGTGTCAGTGTCTCATCCTTTGTGAAGTGC...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAATCATCCCTGGCTTTaGCTAGTGTATATGGTACCT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNNHPWL*LVYMVP
Trigger: AGGTACCATATACACTAGTCAAAGCCAGGGATGATT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATACTTGCTGCCCCATTCTaGCTGTTTGACTCTAATCCT +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALILAAPF*LFDSNP
Trigger: AGGATTAGAGTCAAACAGTCAGAATGGGGCAGCAAG...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAGCCTTGGTACTCAGTTaGTTGGCGAGAATAATTTTG +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQALVLS*LARIIL
Trigger: CAAAATTATTCTCGCCAATCAACTGAGTACCAAGGC...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CTCTGTGACTTCATGTCTCTGATGGACCCAAGAAGAGTTGTTGATTTTTCAGTTTTGCCCCACGGTTCTTaGATATTCTCTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LCDFMSLMDPRRVVDFSVLPHGS*IFSSDF
Trigger: AAAATCAGAAGAGAATATTCAAGAACCGTGGGGCAA...AACTGAAAAATCAACAACTCTTCTTGGGTCCATCAGAGACATGAAGTCACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp TCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTGTCACTCAGGTCATCCTaGAGTAGTAAAGTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: SCRNFFLWVPALLNCDSLSLRSS*SSKVAL
Trigger: AAGAGCTACTTTACTACTTCAGGATGACCTGAGTGA...CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAATACGGATGGGTCCTTaGCCAATGTCTTACACACAG +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIIRMGP*PMSYTQ
Trigger: CTGTGTGTAAGACATTGGGCAAGGACCCATCCGTAT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAATCAATTCTGTACATATaGCGACTATCCCCTCACTTG +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQSILYI*RLSPHL
Trigger: CAAGTGAGGGGATAGTCGGCATATGTACAGAATTGA...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTGTACAATTGGCTGGTaGTATCCCGTAATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNCTIGW*YPVMPF
Trigger: AAAAGGCATTACGGGATAGCACCAGCCAATTGTACA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp AGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTTACACCTTTTGTAATTaGCCCACGGTTCTTGAATAT +
Preference number: 4 (lower is better)
Translates to: RTWYWFLQKFLLVGSCSVYTFCN*PTVLEY
Trigger: ATATTCAAGAACCGTGGGGCAATTACAAAAGGTGTA...AACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp GGGGATTTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGACTGCCTTCTGCTaGTTTTTGTTCCAATCCAAT +
Preference number: 4 (lower is better)
Translates to: GDLLVGIGWLTNSLEELQETAFC*FLFQSN
Trigger: ATTGGATTGGAACAAAAAGCAGCAGAAGGCAGTCTC...CTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAATCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCAAAAGGGGACCTGCTaGTTGTACATTCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNQKGTC*LYILAN
Trigger: ATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTAGAAATTTCTTCTTGTaGGTTCCTGCTCTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: QPDNSNIPVISEPVLMLARNFFL*VPALLN
Trigger: ATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCT...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp GGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGTGGACTCAAGGTTTTATTAGTAGGCATTaGTTGGCTTACAAACTCACT +
Preference number: 4 (lower is better)
Translates to: GIGWLTNSLEELQEWTQGFISRH*LAYKLT
Trigger: AGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAA...ACCTTGAGTCCACTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498470.1
3UTR CAA 72 bp TTATTCTTACTACTCTCCCCATGTAAGAAACTGTGTTaGAGGACCAGTCATTTGGACTTTGCTTCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LFLLLSPCKKLC*RTSHLDFASKG
Trigger: GCCTTTTGAAGCAAAGTCCAAATGACTGGTCCTCAAACACAGTTTCTTACATGGGGAGAGTAGTAAGAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp GAAACAAGGGACAGAGTTCCAGGGCTGTACATTTTATaGGCTACGTTATTCACCATGCTTATAAACTCATCA +
Preference number: 4 (lower is better)
Translates to: ETRDRVPGLYIL*ATLFTMLINSS
Trigger: TGATGAGTTTATAAGCATGGTGAATAACGTAGCCAATAAAATGTACAGCCCTGGAACTCTGTCCCTTGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp TGGAAACTAGTCATGATGTACAGGGAACAAAAGAACTaGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: WKLVMMYREQKN*VLVLAEISSCG
Trigger: CCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTGTACATCATGACTAGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAAAGCATTCCTCAGACTaGAACAGAAGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLKHSSD*NRSSQG
Trigger: TCCTTGGGAACTTCTGTTTCAGTCTGAGGAATGCTT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAACAATGCAGAAGGCTGTaGAATTCAAAACTATGTGAC +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQQCRRL*NSKLCD
Trigger: GTCACATAGTTTTGAATTTCACAGCCTTCTGCATTG...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAATGAATGGAAACATATaGAGGCCACTCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIMNGNI*RPLCPA
Trigger: AGCTGGACAGAGTGGCCTTCATATGTTTCCATTCAT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGGAACTAAGAAGAAATaGAATTGTGTCCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNGTKKK*NCVPML
Trigger: AAGCATGGGGACACAATTTCATTTCTTCTTAGTTCC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp ATCACTGAATTAATAAGAGCTGGAGTAAAAACTAGGCCATTAGCTTCACTCAGGTGCTCTGTTAAATTGTaGTTCTCTGTGTCTACCTGT +
Preference number: 4 (lower is better)
Translates to: ITELIRAGVKTRPLASLRCSVKL*FSVSTC
Trigger: ACAGGTAGACACAGAGAATCACAATTTAACAGAGCA...CCTGAGTGAAGCTAATGGCCTAGTTTTTACTCCAGCTCTTATTAATTCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp TCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTGAAAACAGATAGACAGTaGGGTAGGGATGAACTAATG +
Preference number: 4 (lower is better)
Translates to: SCRNFFLWVPALLNCDSLKTDRQ*GRDELM
Trigger: CATTAGTTCATCCCTACCTCACTGTCTATCTGTTTT...CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAAGGCTCACTTTTTACTaGAGAATTCGGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SDCHITLKCVINLDSSVQRLTFY*RIRSCL
Trigger: TAAACAGCTCCGAATTCTGCAGTAAAAAGTGAGCCT...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTCTAATTCTGCAACTTaGTCACAGATTCTTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPSNSAT*SQILKE
Trigger: CTCCTTAAGAATCTGTGAGCAAGTTGCAGAATTAGA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTGGAAAAATTTCTTTGTaGGCGCATCATTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPGKISL*AHHFYS
Trigger: GGAGTAAAAATGATGCGCGCACAAAGAAATTTTTCC...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp ATCACTGAATTAATAAGAGCTGGAGTAAAAACTAGGCCATTAGCTTCACTCAGGGGCAGAACTTTTTACTaGAGAATTCGGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ITELIRAGVKTRPLASLRGRTFY*RIRSCL
Trigger: TAAACAGCTCCGAATTCTGCAGTAAAAAGTTCTGCC...CCTGAGTGAAGCTAATGGCCTAGTTTTTACTCCAGCTCTTATTAATTCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR GCA 90 bp TCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTGCTTGGTACTGGTTCTTaGAGAAATTTCTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SCRNFFLWVPALLNCDSLLGTGS*RNFFLW
Trigger: CCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAG...CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCTTTGGGGCTTTATTTaGGATTTTACTCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNLWGFI*DFTHCL
Trigger: AAGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
3UTR CAA 72 bp AAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTaGTGGGTTCCTGCTCTGTTAAATTGTGATTCTCTG +
Preference number: 4 (lower is better)
Translates to: KELGTGSCRNFF*WVPALLNCDSL
Trigger: CAGAGAATCACAATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR TCA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGATTTGCAAACATGAAGTaGAGCCAAACCAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRFANMK*SQTSFQ
Trigger: TTGAAAACTGGTTTGGCTTCACTTCATGTTTGCAAA...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAAGCATTCTTGGCCCCTaGCCTATAAATAAACACTCT +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALISILGP*PINKHS
Trigger: AGAGTGTTTATTTATAGGTCAGGGGCCAAGAATGCT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATACCATTCTGCCTTGAGTaGTTATTGCGTATTTTGGGT +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIPFCLE*LLRILG
Trigger: ACCCAAAATACGCAATAAGCACTCAAGGCAGAATGG...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GATTTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGGGCAGAACTTTTTACTaGAGAATTCGGAGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: DLLVGIGWLTNSLEELQEGRTFY*RIRSCL
Trigger: TAAACAGCTCCGAATTCTGCAGTAAAAAGTTCTGCC...CTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498470.1
3UTR CAA 72 bp TTAAGTAACGCTTTTCTGTTAGAATACACTATTGATTaGAAACCACATGTTAGTCCATGCCTGGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSNAFLLEYTID*KPHVSPCLEAH
Trigger: GTGAGCTTCCAGGCATGGACTAACATGTGGTTTCAAATCAATAGTGTATTCTAACAGAAAAGCGTTACTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAATGAAGGTCTCTATTTaGTCACTGTTAACTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLMKVSI*SLLTLP
Trigger: GGGAAGAGTTAACAGTGATCAAATAGAGACCTTCAT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp TCCTTCAGCTATACCGGTATAGATGCTCTATCTTCACTCTTTGAGAAAATTGATGGACTCAAGGTTTTCTaGACAAGAATTAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: SFSYTGIDALSSLFEKIDGLKVF*TRIRMS
Trigger: AGACATTCTAATTCTTGTTCAGAAAACCTTGAGTCC...ATCAATTTTCTCAAAGAGTGAAGATAGAGCATCTATACCGGTATAGCTGAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAAATAGGAAAGAACAGTaGACGAAGGAAAAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLNRKEQ*TKEKAK
Trigger: CTTTGCCTTTTCCTTCGTCCACTGTTCTTTCCTATT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATCTACAAAATCTAAGATaGAATAGGAAAGAACAGTGG +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNLQNLR*NRKEQW
Trigger: CCACTGTTCTTTCCTATTCCATCTTAGATTTTGTAG...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTGTGCTAGGTTTTGCTaGAAGAGGGAATTTAATAAA +
Preference number: 4 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNCARFC*KREFNK
Trigger: TTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACTTGAATGCATCTATTaGATTAAGTTACAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLLECIY*IKLQLR
Trigger: CCTCAGCTGTAACTTAATTCAATAGATGCATTCAAG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR TCA 90 bp GTAATTCAAAAGTCTTGTCTCTATGTGGAATATCATTTCCTTTCAAGCTGCAGACCCAAGAAGAGTTGTTaGTTTTTCAGTTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VIQKSCLYVEYHFLSSCRPKKSC*FFSSAF
Trigger: AAAAGCTGAACTGAAAAATCAACAACTCTTCTTGGG...TCTGCAGCTTGAAAGGAAATGATATTCCACATAGAGACAAGACTTTTGAATTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAAGCTGGATTTATGAATaGAAACATATGAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLSWIYE*KHMKAT
Trigger: AGTGGCCTTCATATGTTTCCATTCATAAATCCAGCT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAGACTATCCCCTCACTTaGATTGTACATTACATTTTC +
Preference number: 4 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLDYPLT*IVHYIF
Trigger: GAAAATGTAATGTACAATCCAAGTGAGGGGATAGTC...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAAGCCCTATCTCACTTTaGTCAATTTTAAAGTTAGTC +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALISPISL*SILKLV
Trigger: GACTAACTTTAAAATTGAGCAAAGTGAGATAGGGCT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR GCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAAACTGGTTAGAAATCTaGAAACCAGAAATGCAATAC +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALINWLEI*KPEMQY
Trigger: GTATTGCATTTCTGGTTTGCAGATTTCTAACCAGTT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CCA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATAATCATTTCCATAGTCTaGAACCAAATCAAACTTCAG +
Preference number: 4 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIIISIV*NQIKLQ
Trigger: CTGAAGTTTGATTTGGTTCCAGACTATGGAAATGAT...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 90 bp GGCACTCCTGGGCCGTGCACGGCAGACGCCGGTAGCCCGACAGGATaGAGCACTCCACGAAGTCGTCGGGCACCTCGTCCCAGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GTPGPCTADAGSPTG*STPRSRRAPRPSAA
Trigger: TGCTGCGCTGGGACGAGGTGCCCGACGACTTCGTGGAGTGCTTCATCCTGTCGGGCTACCGGCGTCTGCCGTGCACGGCCCAGGAGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 90 bp AGGTGCGCAGCGCGAACGGGTAGGTACACCAGTCGGTACGGCTCTTaGAGCAGGCCACAGTGCAAGCCACCGCCAGCACGAAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: RCAARTGRYTSRYGS*SRPQCKPPPARRPQ
Trigger: CTGTGGCCTTCGTGCTGGCGGTGGCTTGCACTGTGGCCTGCTGCAAGAGCCGTACCGACTGGTGTACCTACCCGTTCGCGCTGCGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 90 bp GACCACCAGCAGCAGCATGTAGCCCACAGTACCCGAGAAAGTGGGTaGGGCAGGCGGCGCCTGGAGGAACTGGCGCAGGCCCTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: DHQQQHVAHSTRESG*GRRRLEELAQALFY
Trigger: GTAGAAGAGGGCCTGCGCCAGTTCCTCCAGGCGCCGCCTGCCGCACCCACTTTCTCGGGTACTGTGGGCTACATGCTGCTGCTGGTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS TCA 90 bp AGTCCAGGTAGAAGAAGGCGGCGCGCAGACGCAGCGACAGGCAGCTaGACACGTGCGCCGTGCAGCTCATGGCGAAGGTCAGCAGCACTC +
Preference number: 5 (lower is better)
Translates to: SPGRRRRRADAATGS*TRAPCSSWRRSAAL
Trigger: GAGTGCTGCTGACCTTCGCCATGAGCTGCACGGCGCACGTGTTCAGCTGCCTGTCGCTGCGTCTGCGCGCCGCCTTCTTCTACCTGGACT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 90 bp GCGGCGATAAGGCGCGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTaGAAGTATGGAGTCATGACTCTGGCATCCAGCAAGCTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: AAIRRVQSTCQPRRC*KYGVMTLASSKLRP
Trigger: AGGCCTCAGCTTGCTGGATGCCAGAGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACGCGCCTTATCGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CCA 90 bp AAGGCGCGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTGCAAGTATaGAGTCATGACTCTGGCATCCAGCAAGCTGAGGCCTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: KARAVHVPAQALLQV*SHDSGIQQAEAWQQ
Trigger: CTGTTGCCAGGCCTCAGCTTGCTGGATGCCAGAGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACGCGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 90 bp ACAGGTAGTAGTAGTAGGCCACCGTGCTGCCGAAGCCGTAGTAGCTaGTGGACGCGTAGTCCAGGTAGAAGAAGGCGGCGCGCAGACGCA +
Preference number: 5 (lower is better)
Translates to: TGSSSRPPCCRSRSS*WTRSPGRRRRRADA
Trigger: TGCGTCTGCGCGCCGCCTTCTTCTACCTGGACTACGCGTCCATCAGCTACTACGGCTTCGGCAGCACGGTGGCCTACTACTACTACCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 90 bp TGTCGAAAAGACCCGGCTGGATGCGCTCGGGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCAGCCAGAAGTAGCGGCGGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: CRKDPAGCARGSCSR*RRRPPPARSSGGRS
Trigger: ACTTCTACCGCCGCTACTTCTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS CCA 90 bp TGGAAGAGCTGGTGGCTGTGGCCGATAATGTCGAAAAGACCCGGCTaGATGCGCTCGGGGATCTTGCTCACGTTGAAGAAGGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: WKSWWLWPIMSKRPG*MRSGILLTLKKAAT
Trigger: GGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGACATTATCGGCCACAGCCACCAGCTCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS CCA 90 bp CTGCAAGTATGGAGTCATGACTCTGGCATCCAGCAAGCTGAGGCCTaGCAACAGGTAGTAGTAGTAGGCCACCGTGCTGCCGAAGCCGTA +
Preference number: 5 (lower is better)
Translates to: LQVWSHDSGIQQAEA*QQVVVVGHRAAEAV
Trigger: TACGGCTTCGGCAGCACGGTGGCCTACTACTACTACCTGTTGCCAGGCCTCAGCTTGCTGGATGCCAGAGTCATGACTCCATACTTGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGACCGCCGTCGGAGCCTTaGTGCCCACGCCGGGGGCGT +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRPPSEP*CPRRGR
Trigger: ACGCCCCCGGCGTGGGCACAAAGGCTCCGACGGCGG...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGGGATCTTGCTCACGTaGAAGAAGGCGGCCACCACC +
Preference number: 5 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLGILLT*KKAATT
Trigger: GGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGAAGTTGAGCGTCTCGTaGGTAGGCTTCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLKLSVS*VGFSTE
Trigger: CTCGGTGCTGAAGCCTACCAACGAGACGCTCAACTT...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACCCTGGGTTTGCGTCTTaGTGCCTGTTTCCTACAAAG +
Preference number: 5 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDPGFAS*CLFPTK
Trigger: CTTTGTAGGAAACAGGCACAAAGACGCAAACCCAGG...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GAAAACGTGTGGCCTCTCACAAAAGAACACAGTAGTGCTCAGCTCCAACCACTGGGCTCTTTGTCCTTGTaGGGAACCCAAATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ENVWPLTKEHSSAQLQPLGSLSL*GTQMLC
Trigger: GCAGAGCATTTGGGTTCCCAACAAGGACAAAGAGCC...CAGTGGTTGGAGCTGAGCACTACTGTGTTCTTTTGTGAGAGGCCACACGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTTAGTGTCTGTGTGCTaGGCCAGGCATCATAGCCAT +
Preference number: 5 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLELVSVC*ARHHSH
Trigger: ATGGCTATGATGCCTGGCCAAGCACACAGACACTAA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGACAGTCGGTACGGCTCTaGCAGCAGGCCACAGTGCAA +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRQSVRL*QQATVQ
Trigger: TTGCACTGTGGCCTGCTGCAAGAGCCGTACCGACTG...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATATGCGCTCGGGGATCTaGCTCACGTTGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: LGTGSCRNFFLWVPALLNMRSGI*LTLKKA
Trigger: CGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCAT...ATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGAGGCTTGTTCGCTTTTaGTCAGGTGATATATGTCAG +
Preference number: 5 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLERLVRF*SGDICQ
Trigger: CTGACATATATCACCTGACAAAAAGCGAACAAGCCT...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACGGGCTGTACATTTTATaGGCTACGTTATTCACCATG +
Preference number: 5 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDGLYIL*ATLFTM
Trigger: CATGGTGAATAACGTAGCCAATAAAATGTACAGCCC...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTAAGGGGACCTGCTGGTaGTACATTCTTGCAAATCCA +
Preference number: 5 (lower is better)
Translates to: PYFKASSGLGSLCSSELFKGTCW*YILANP
Trigger: TGGATTTGCAAGAATGTACAACCAGCAGGTCCCCTT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATATGCGCTCGGGGATCTaGCTCACGTTGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNMRSGI*LTLKKA
Trigger: CGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCAT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTTGTAAGAAACTGTGTTaGAGGACCAGTCATTTGGAC +
Preference number: 5 (lower is better)
Translates to: PYFKASSGLGSLCSSELFCKKLC*RTSHLD
Trigger: GTCCAAATGACTGGTCCTCAAACACAGTTTCTTACA...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CGAAGTCAAACACCTTCATTTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGTACTGCCAAAATAGGTaGTACATAGATAATGGACTG +
Preference number: 5 (lower is better)
Translates to: RSQTPSFSRHDSMAPLLEYCQNR*YIDNGL
Trigger: CAGTCCATTATCTATGTACAACCTATTTTGGCAGTA...CTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAAATGAAGGTGTTTGACTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TTTCCAGGCATGACTCTATGGCGCCGCTCCTTGAGATGTCATCCAGATCATGACATCCCCTCACTTGGATaGTACATTACATTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: FPGMTLWRRSLRCHPDHDIPSLG*YITFSS
Trigger: ACTTGAAAATGTAATGTACAATCCAAGTGAGGGGAT...GTCATGATCTGGATGACATCTCAAGGAGCGGCGCCATAGAGTCATGCCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTAGGCTGACTGCACAGTaGAACTTGCTGCCCCATTCT +
Preference number: 5 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPRLTAQ*NLLPHS
Trigger: AGAATGGGGCAGCAAGTTCAACTGTGCAGTCAGCCT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTGCCTTCTGCTGCTTTTaGTTCCAATCCAATCTTCCG +
Preference number: 5 (lower is better)
Translates to: QPDNSNIPVISEPVLMLAAFCCF*FQSNLP
Trigger: CGGAAGATTGGATTGGAACAAAAAGCAGCAGAAGGC...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAAAGCCTCCAGTGGGTaGGGATCCCTTTGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNKASSG*GSLCSS
Trigger: ACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCCTACTTCAAAGCCTCCAGTGGGTTGGGATCCCTTTGTAGCAGTGAACTTTTTATGGACCATGAAACCTaGATTTTCAGTCAGGTAAGA +
Preference number: 5 (lower is better)
Translates to: PYFKASSGLGSLCSSELFMDHET*IFSQVR
Trigger: TCTTACCTGACTGAAAATCAAGGTTTCATGGTCCAT...AAAAAGTTCACTGCTACAAAGGGATCCCAACCCACTGGAGGCTTTGAAGTAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTACTGCACAGTTGAACTaGCTGCCCCATTCTGACTGT +
Preference number: 5 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPTAQLN*LPHSDC
Trigger: ACAGTCAGAATGGGGCAGCAAGTTCAACTGTGCAGT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAAACAGACGGCAGAACTaGCTCAGGAACAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLNRRQN*LRNSSS
Trigger: GCTGCTGCTGTTCCTGAGCAAGTTCTGCCGTCTGTT...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATGTTGGCTCTTTGTCCTaGTTGGGAACCCAAATGCTC +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNVGSLS*LGTQML
Trigger: GAGCATTTGGGTTCCCAACAAGGACAAAGAGCCAAC...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCTGCTTATTGCGTATTTaGGGTGGAGGTATAAGGCAT +
Preference number: 5 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSCLLRI*GGGIRH
Trigger: ATGCCTTATACCTCCACCCAAAATACGCAATAAGCA...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCGCTGGTTGTACATTCTaGCAAATCCAAGAACAGTCA +
Preference number: 5 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSAGCTF*QIQEQS
Trigger: TGACTGTTCTTGGATTTGCAAGAATGTACAACCAGC...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTAGCCTGTTCTCATGCTaGCTCTGTTTCTTCAAACTG +
Preference number: 5 (lower is better)
Translates to: DNSNIPVISEPVLMLALFSLFSC*LCFFKL
Trigger: CAGTTTGAAGAAACAGAGCAAGCATGAGAACAGGCT...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTATCTACATTAGAGGGTaGGCTCTTTGTCCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPIYIRG*ALCPCW
Trigger: CCAACAAGGACAAAGAGCCAACCCTCTAATGTAGAT...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACTATGGCGCCGCTCCTaGAGATGTCATCCAGATCAT +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLLWRRS*RCHPDH
Trigger: ATGATCTGGATGACATCTCAAGGAGCGGCGCCATAG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAATACGGATGGGTCCTaGCCCAATGTCTTACACACA +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRNTDGS*PNVLHT
Trigger: TGTGTGTAAGACATTGGGCAAGGACCCATCCGTATT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTCAGTTTGTCTAGGCTaGTTCGCTTTTTGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPSVCLG*FAFCQV
Trigger: CACCTGACAAAAAGCGAACAAGCCTAGACAAACTGA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp ATAATGCCCTTTACTGCAAAAGGGGACCTGCTGGTTGTACATTCTTGCAAATCCCATGAAGGTCTCTATTaGATCACTGTTAACTCTTCC +
Preference number: 5 (lower is better)
Translates to: IMPFTAKGDLLVVHSCKSHEGLY*ITVNSS
Trigger: GGAAGAGTTAACAGTGATCAAATAGAGACCTTCATG...GGATTTGCAAGAATGTACAACCAGCAGGTCCCCTTTTGCAGTAAAGGGCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGTGGGCCTTCTGCTGCTTTTaGTTCCAATCCAATCTTCCG +
Preference number: 5 (lower is better)
Translates to: LLVGIGWLTNSLEELQEWAFCCF*FQSNLP
Trigger: CGGAAGATTGGATTGGAACAAAAAGCAGCAGAAGGC...CCACTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CAA 90 bp GATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTCTGTTTTGGACCCAAGAAGAGTaGTTGATTTTTCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: DNSNIPVISEPVLMLALFWTQEE*LIFQFS
Trigger: GCTGAACTGAAAAATCAACAACTCTTCTTGGGTCCA...AAACAGAGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CCTGCTGGTTGTACATTCTTGCAAATCCAAGAACAGTCACCGTATTTAAAACCTTTTTACTCACTGCCTTaGAGAAATCCCTGGATGTCA +
Preference number: 5 (lower is better)
Translates to: PAGCTFLQIQEQSPYLKPFYSLP*RNPWMS
Trigger: TGACATCCAGGGATTTCTCAAAGGCAGTGAGTAAAA...AGGTTTTAAATACGGTGACTGTTCTTGGATTTGCAAGAATGTACAACCAGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CAACCTGATAATTCCAACATCCCTGTCATATCTGAGCCTGTTCTCATGCTTGCTACCCAAGAAGAGTTGTaGATTTTTCAGTTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: QPDNSNIPVISEPVLMLATQEEL*IFQFSF
Trigger: AAAGCTGAACTGAAAAATCAACAACTCTTCTTGGGT...AGCAAGCATGAGAACAGGCTCAGATATGACAGGGATGTTGGAATTATCAGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTCCTGCTCTGTTAAATTGCAGAAATTTCTTCTaGTGGGTTCCTGCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: LGTGSCRNFFLWVPALLNCRNFF*WVPALL
Trigger: TAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCA...ATTTAACAGAGCAGGAACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAAATCATCCCTGGCTTaGACTAGTGTATATGGTACC +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRKSSLA*TSVYGT
Trigger: GGTACCATATACACTAGTCAAAGCCAGGGATGATTT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTATGCCTTGAGTGCTTATaGCGTATTTTGGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLCLECL*RILGGG
Trigger: ACCTCCACCCAAAATACGCAATAAGCACTCAAGGCA...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAACTGAGAATGCCTCTCTaGCTAGCTAAATACAGTTCT +
Preference number: 5 (lower is better)
Translates to: SDCHITLKCVINLDSSVQLRMPL*LAKYSS
Trigger: AGAACTGTATTTAGCTAGCAAGAGAGGCATTCTCAG...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATAATCCCACCAAAAACTaGAAACCAACACCATCTTCT +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNNPTKN*KPTPSS
Trigger: AGAAGATGGTGTTGGTTTCAAGTTTTTGGTGGGATT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTAGACAAACAGAATTCCTaGCCTGTCTACTCGAACACT +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLDKQNS*PVYSNT
Trigger: AGTGTTCGAGTAGACAGGCAAGGAATTCTGTTTGTC...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAAGAAAACTAGCCTGTTaGAAAAGTAGACCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRRKLAC*KSRPSV
Trigger: CACAGAAGGTCTACTTTTCAAACAGGCTAGTTTTCT...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTGCCTTGGTACTCAGTaGATTGGCGAGAATAATTTT +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNCLGTQ*IGENNF
Trigger: AAAATTATTCTCGCCAATCAACTGAGTACCAAGGCA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTATGCCTCACCTCTTTATaGCCTTGGTACTCAGTTGAT +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLCLTSL*PWYSVD
Trigger: ATCAACTGAGTACCAAGGCAATAAAGAGGTGAGGCA...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CAGGGAACAAAAGAACTTGGTACTGGTTCTTGCAGAAATTTCTTCTTGTGGGTTAGTTCAGCTTTTTACTaGTTAAGATGGAGTGACAAC +
Preference number: 5 (lower is better)
Translates to: QGTKELGTGSCRNFFLWVSSAFY*LRWSDN
Trigger: GTTGTCACTCCATCTTAACAAGTAAAAAGCTGAACT...AACCCACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGTTCTTTTGTTCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp ATCACTGAATTAATAAGAGCTGGAGTAAAAACTAGGCCATTAGCTTCACTCAGGACTTGGTACTGGTTCTaGCAGAAATTTCTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: ITELIRAGVKTRPLASLRTWYWF*QKFLLV
Trigger: CACAAGAAGAAATTTCTGCAAGAACCAGTACCAAGT...CCTGAGTGAAGCTAATGGCCTAGTTTTTACTCCAGCTCTTATTAATTCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492509.5
CDS-3UTR CAA 90 bp GGGGATTTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGCTCTATCTTCACTCTTaGAGAAAATTGATGTCAGGC +
Preference number: 5 (lower is better)
Translates to: GDLLVGIGWLTNSLEELQLYLHS*RKLMSG
Trigger: GCCTGACATCAATTTTCTCAAAGAGTGAAGATAGAG...CTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAATCCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CAA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATATCTTTGGGGCTTTATTaGGGATTTTACTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: EIQNYVTKKIQCVPQALISLGLY*GFYSLP
Trigger: AGGCAGTGAGTAAAATCCCAAATAAAGCCCCAAAGA...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GTTAATCTAGAGTGGCCATCTCAATTACAGGTTAGCATTTGTAAGAAATGTCTACATTGGCTAATCTGTTaGTTAGAAAGGATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VNLEWPSQLQVSICKKCLHWLIC*LERISG
Trigger: CCCTGAGATCCTTTCTAACAAACAGATTAGCCAATG...TAGACATTTCTTACAAATGCTAACCTGTAATTGAGATGGCCACTCTAGATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CCTTCTGTGCTAGGTTTTGCTGGAAGAGGGAATTTAATAAAGTTTCTAACCAGAGATTGCCACATTACCTaGAAATGTGTAATAAACCTG +
Preference number: 5 (lower is better)
Translates to: PSVLGFAGRGNLIKFLTRDCHIT*KCVINL
Trigger: CAGGTTTATTACACATTTCAAGGTAATGTGGCAATC...TCTGGTTAGAAACTTTATTAAATTCCCTCTTCCAGCAAAACCTAGCACAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAAGGCTAAATTGTTTTTaGACTGCAAGCACTTACAAG +
Preference number: 5 (lower is better)
Translates to: SDCHITLKCVINLDSSVQRLNCF*TASTYK
Trigger: CTTGTAAGTGCTTGCAGTCAAAAAACAATTTAGCCT...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp TCTGATTGCCACATTACCTTGAAATGTGTAATAAACCTGGATAGTTCCGTGCAAGGTAAACTTCAACAGTaGAAGAACAAGATGGTAACA +
Preference number: 5 (lower is better)
Translates to: SDCHITLKCVINLDSSVQGKLQQ*KNKMVT
Trigger: TGTTACCATCTTGTTCTTCAACTGTTGAAGTTTACC...TTGCACGGAACTATCCAGGTTTATTACACATTTCAAGGTAATGTGGCAATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATTTGGCGAGAATAATTTaGTTCATAGCCTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNLARII*FIASRK
Trigger: TTTTCTGGAGGCTATGAACAAAATTATTCTCGCCAA...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp CATAAGGCAGATGGTTGGAGAAGGCCTAAATACACATGGAATCCTTTTAGAAATATGGGAAAAATTTCTTaGTGCGCGCATCATTTTTAC +
Preference number: 5 (lower is better)
Translates to: HKADGWRRPKYTWNPFRNMGKIS*CAHHFY
Trigger: GTAAAAATGATGCGCGCACAAAGAAATTTTTCCCAT...ATTTCTAAAAGGATTCCATGTGTATTTAGGCCTTCTCCAACCATCTGCCTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS-3UTR CAA 90 bp GATTTATTAGTAGGCATTGGTTGGCTTACAAACTCACTAGAAGAATTACAGGAGCACTCTTTGAGAAAATaGATGTCAGGCATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: DLLVGIGWLTNSLEELQEHSLRK*MSGMKV
Trigger: GACTTTCATGCCTGACATCAATTTTCTCAAAGAGTG...CTCCTGTAATTCTTCTAGTGAGTTTGTAAGCCAACCAATGCCTACTAATAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498470.1
CDS-3UTR CAA 90 bp GAAATTCAAAACTATGTGACAAAGAAAATTCAGTGCGTACCACAGGCTTTGATACAAAGCTCCATTCTTTaGACAAATCCAAGCATTCCT +
Preference number: 5 (lower is better)
Translates to: EIQNYVTKKIQCVPQALIQSSIL*TNPSIP
Trigger: AGGAATGCTTGGATTTGTCAAAAGAATGGAGCTTTG...TATCAAAGCCTGTGGTACGCACTGAATTTTCTTTGTCACATAGTTTTGAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CCA 72 bp CACCTCGTCCCAGCGCAGCAGCGGCTTGGCAGACGCTaGGGGGTCCCGGGAGGCGGCAGAGTGGGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: HLVPAQQRLGRR*GVPGGGRVGVP
Trigger: CGGAACTCCCACTCTGCCGCCTCCCGGGACCCCCCAGCGTCTGCCAAGCCGCTGCTGCGCTGGGACGAGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 72 bp GGGCCGTGCACGGCAGACGCCGGTAGCCCGACAGGATaGAGCACTCCACGAAGTCGTCGGGCACCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: GPCTADAGSPTG*STPRSRRAPRP
Trigger: GGGACGAGGTGCCCGACGACTTCGTGGAGTGCTTCATCCTGTCGGGCTACCGGCGTCTGCCGTGCACGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 72 bp CCGTCGGAGCCTTTGTGCCCACGCCGGGGGCGTCGCTaGAGGTTTAGGAGAAGACCCGTGCCTCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSEPLCPRRGRR*RFRRRPVPPSS
Trigger: GCTGCTCGGAGGCACGGGTCTTCTCCTAAACCTGCAGCGACGCCCCCGGCGTGGGCACAAAGGCTCCGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 72 bp CAGCAGCATGTAGCCCACAGTACCCGAGAAAGTGGGTaGGGCAGGCGGCGCCTGGAGGAACTGGCGCAGGCC +
Preference number: 6 (lower is better)
Translates to: QQHVAHSTRESG*GRRRLEELAQA
Trigger: GGCCTGCGCCAGTTCCTCCAGGCGCCGCCTGCCGCACCCACTTTCTCGGGTACTGTGGGCTACATGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS TCA 72 bp AGAAGAAGGCGGCGCGCAGACGCAGCGACAGGCAGCTaGACACGTGCGCCGTGCAGCTCATGGCGAAGGTCA +
Preference number: 6 (lower is better)
Translates to: RRRRRADAATGS*TRAPCSSWRRS
Trigger: TGACCTTCGCCATGAGCTGCACGGCGCACGTGTTCAGCTGCCTGTCGCTGCGTCTGCGCGCCGCCTTCTTCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 72 bp GACCCGGCTGGATGCGCTCGGGGATCTTGCTCACGTTaGAGAAGGCGGCCACCACCAGCCAGAAGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: DPAGCARGSCSR*RRRPPPARSSG
Trigger: GCCGCTACTTCTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCATCCAGCCGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS GCA 72 bp GCGCGAACGGGTAGGTACACCAGTCGGTACGGCTCTTaGAGCAGGCCACAGTGCAAGCCACCGCCAGCACGA +
Preference number: 6 (lower is better)
Translates to: ARTGRYTSRYGS*SRPQCKPPPAR
Trigger: TCGTGCTGGCGGTGGCTTGCACTGTGGCCTGCTGCAAGAGCCGTACCGACTGGTGTACCTACCCGTTCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 72 bp TACACCAGTCGGTACGGCTCTTGCAGCAGGCCACAGTaGAAGCCACCGCCAGCACGAAGGCCACAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: YTSRYGSCSRPQ*KPPPARRPQAA
Trigger: TGCTGCCTGTGGCCTTCGTGCTGGCGGTGGCTTGCACTGTGGCCTGCTGCAAGAGCCGTACCGACTGGTGTA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 72 bp AGGCGCGTGCAGTCCACGTGCCAGCCCAGGCGCTGCTaGAAGTATGGAGTCATGACTCTGGCATCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: RRVQSTCQPRRC*KYGVMTLASSK
Trigger: CTTGCTGGATGCCAGAGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CCA 72 bp GCAGTCCACGTGCCAGCCCAGGCGCTGCTGCAAGTATaGAGTCATGACTCTGGCATCCAGCAAGCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: AVHVPAQALLQV*SHDSGIQQAEA
Trigger: GGCCTCAGCTTGCTGGATGCCAGAGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCACGTGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CAA 90 bp AACAGCAGCAGCGGGATGAAGTGCGTCCAGAAGTTGAGCGTCTCGTaGGTAGGCTTCAGCACCGAGGCTAGGCACTCCTGGGCCGTGCAC +
Preference number: 6 (lower is better)
Translates to: NSSSGMKCVQKLSVS*VGFSTEARHSWAVH
Trigger: GTGCACGGCCCAGGAGTGCCTAGCCTCGGTGCTGAAGCCTACCAACGAGACGCTCAACTTCTGGACGCACTTCATCCCGCTGCTGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS TCA 72 bp AGTAGTAGGCCACCGTGCTGCCGAAGCCGTAGTAGCTaGTGGACGCGTAGTCCAGGTAGAAGAAGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SSRPPCCRSRSS*WTRSPGRRRRR
Trigger: GCGCCGCCTTCTTCTACCTGGACTACGCGTCCATCAGCTACTACGGCTTCGGCAGCACGGTGGCCTACTACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS GCA 72 bp ATAAGGCGCGTGCAGTCCACGTGCCAGCCCAGGCGCTaGTGCAAGTATGGAGTCATGACTCTGGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: IRRVQSTCQPRR*CKYGVMTLASS
Trigger: GCTGGATGCCAGAGTCATGACTCCATACTTGCAGCAGCGCCTGGGCTGGCACGTGGACTGCACGCGCCTTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CCA 72 bp GCCAGAAGTAGCGGCGGTAGAAGTGCACGAAGAGTGTaGGGTTCTCCCCACGCAGGTCGAAGAGCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ARSSGGRSARRV*GSPHAGRRASS
Trigger: AGAGCTGGCTCTTCGACCTGCGTGGGGAGAACCCCACACTCTTCGTGCACTTCTACCGCCGCTACTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CAA 72 bp ACGTCGCCGCCGCTCAGGAAGAACAGACGGCAGAACTaGCTCAGGAACAGCAGCAGCGGGATGAAGTGCGTC +
Preference number: 6 (lower is better)
Translates to: TSPPLRKNRRQN*LRNSSSGMKCV
Trigger: GACGCACTTCATCCCGCTGCTGCTGTTCCTGAGCAAGTTCTGCCGTCTGTTCTTCCTGAGCGGCGGCGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CAA 72 bp ATGTCGAAAAGACCCGGCTGGATGCGCTCGGGGATCTaGCTCACGTTGAAGAAGGCGGCCACCACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: MSKRPGWMRSGI*LTLKKAATTSQ
Trigger: CTGGCTGGTGGTGGCCGCCTTCTTCAACGTGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5
CDS CAA 90 bp TGGAAGGGCACGTCGCCGCCGCTCAGGAAGAACAGACGGCAGAACTaGCTCAGGAACAGCAGCAGCGGGATGAAGTGCGTCCAGAAGTTG +
Preference number: 6 (lower is better)
Translates to: WKGTSPPLRKNRRQN*LRNSSSGMKCVQKL
Trigger: CAACTTCTGGACGCACTTCATCCCGCTGCTGCTGTTCCTGAGCAAGTTCTGCCGTCTGTTCTTCCTGAGCGGCGGCGACGTGCCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CAA 72 bp AGCGGGATGAAGTGCGTCCAGAAGTTGAGCGTCTCGTaGGTAGGCTTCAGCACCGAGGCTAGGCACTCCTGG +
Preference number: 6 (lower is better)
Translates to: SGMKCVQKLSVS*VGFSTEARHSW
Trigger: CCAGGAGTGCCTAGCCTCGGTGCTGAAGCCTACCAACGAGACGCTCAACTTCTGGACGCACTTCATCCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340634.6
CDS CCA 72 bp TGGTGGCTGTGGCCGATAATGTCGAAAAGACCCGGCTaGATGCGCTCGGGGATCTTGCTCACGTTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: WWLWPIMSKRPG*MRSGILLTLKK
Trigger: CTTCTTCAACGTGAGCAAGATCCCCGAGCGCATCCAGCCGGGTCTTTTCGACATTATCGGCCACAGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340634.6
ENST00000492509.5