RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAQR8 (Homo sapiens)

Ensembl gene IDs: ENSG00000170915

Ensembl transcript IDs: ENST00000360726.3, ENST00000442253.3, ENST00000512121.1

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTaGTTCACATGTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCA +
Preference number: 1 (lower is better)
Translates to: HRSFWAAMLQTNQGA*FTCSHPKEPSGTNP
Trigger: TGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAACATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 90 bp TCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATaGTCCAAACAAACCAGGGTGCCTGGTTCACATGTTCTCACCCAA +
Preference number: 1 (lower is better)
Translates to: SIPSTTYPIEASGQQ*SKQTRVPGSHVLTQ
Trigger: TTGGGTGAGAACATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CCA 90 bp CCACAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTaGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATGT +
Preference number: 1 (lower is better)
Translates to: PQHINPKHHLSHRSF*AAMLQTNQGAWFTC
Trigger: ACATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 90 bp TTAGGCAAGAGAGAAGCAGGCAAATGTGTCCTGTTTGCTGTGTCCTaGCATCTCCTCTCCCTACACTGCATTTCATTCATGAGAGGATGT +
Preference number: 1 (lower is better)
Translates to: LGKREAGKCVLFAVS*HLLSLHCISFMRGC
Trigger: ACATCCTCTCATGAATGAAATGCAGTGTAGGGAGAGGAGATGGCAGGACACAGCAAACAGGACACATTTGCCTGCTTCTCTCTTGCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 90 bp CTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATaGTTGCCTATCCCAGTACTTGAGTATTTTATGGGTTCTGCTCTA +
Preference number: 1 (lower is better)
Translates to: LTQRSLQGPIHSKHT*LPIPVLEYFMGSAL
Trigger: TAGAGCAGAACCCATAAAATACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 90 bp ATCATGTCACAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTaGACCCATCTGATCATTGCTCTACCTCCGGTTCTCTCTTTTAAA +
Preference number: 1 (lower is better)
Translates to: IMSQAINNVQIGTGL*THLIIALPPVLSFK
Trigger: TTTAAAAGAGAGAACCGGAGGTAGAGCAATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTGTGACATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 90 bp TCCATTACCAAAGAACAGCATAGTAGGATAGCCATTCCAACAGGGTaGGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCC +
Preference number: 1 (lower is better)
Translates to: SITKEQHSRIAIPTG*GPATYLLSSPILLS
Trigger: GGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTGTTGGAATGGCTATCCTACTATGCTGTTCTTTGGTAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 90 bp TTCCTGAATGTCCACATGAATCCAAGCATTTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATTACCATGCAAGGTAGGGATGTGAGT +
Preference number: 1 (lower is better)
Translates to: FLNVHMNPSISWKYD*FLVLYITMQGRDVS
Trigger: ACTCACATCCCTACCTTGCATGGTAATATAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATGCTTGGATTCATGTGGACATTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 90 bp AGTATTATAGTTGTCGAGAAAGGAGGGACCAGAAATCAGATGAACTaGGTAATTCATCATGTCATCTTGAAGGCTTTTCCACTCTGGACA +
Preference number: 1 (lower is better)
Translates to: SIIVVEKGGTRNQMN*VIHHVILKAFPLWT
Trigger: TGTCCAGAGTGGAAAAGCCTTCAAGATGACATGATGAATTACTCAGTTCATCTGATTTCTGGTCCCTCCTTTCTCGACAACTATAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CCA 90 bp ATGAGAATAAGCTTCCTGAATGTCCACATGAATCCAAGCATTTCCTaGAAGTATGACTGCTTCCTAGTCCTTTATATTACCATGCAAGGT +
Preference number: 1 (lower is better)
Translates to: MRISFLNVHMNPSIS*KYDCFLVLYITMQG
Trigger: ACCTTGCATGGTAATATAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATGCTTGGATTCATGTGGACATTCAGGAAGCTTATTCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 90 bp TGTCATCTTGAAGGCTTTTCCACTCTGGACAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCAATTTATTCCATTACCAAAGAACAG +
Preference number: 1 (lower is better)
Translates to: CHLEGFSTLDNLKSK*NSVLGSIYSITKEQ
Trigger: CTGTTCTTTGGTAATGGAATAAATTGACCCAAGGACCGAATTTCATTTGGATTTCAAATTGTCCAGAGTGGAAAAGCCTTCAAGATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTAGTATCTATGCTTATTaGCTGGGCCTCCTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPSIYAY*LGLLVA
Trigger: AGCCACCAGGAGGCCCAGCCAATAAGCATAGATACT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCATGGCGATTCCCTGGTaGAACCCCCAGATCTCCTGG +
Preference number: 2 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACMAIPW*NPQISW
Trigger: CCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCAT...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAAATATGGCGATTCCCTaGTGCAACCCCCAGATCTCC +
Preference number: 2 (lower is better)
Translates to: SFTGLVQKSILREGCMATNMAIP*CNPQIS
Trigger: GGAGATCTGGGGGTTGCACCAGGGAATCGCCATATT...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGTGCAAGGTAGGGATGTaGGTGAACAGCACGTCAGAG +
Preference number: 2 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLCKVGM*VNSTSE
Trigger: CTCTGACGTGCTGTTCACTCACATCCCTACCTTGCA...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGTCTATGCTTATTGGCTaGGCCTCCTGGTGGCTCTTG +
Preference number: 2 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLSMLIG*ASWWLL
Trigger: CAAGAGCCACCAGGAGGCCCAGCCAATAAGCATAGA...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATTTTGTGGGTCCTTCGTaGGGCAGCATCTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHFVGPS*GSIYVG
Trigger: TCCTACATAGATGCTGCCCCACGAAGGACCCACAAA...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATGTTTTCTCCAAATTATaGGGGGCTTCCTCCACACGT +
Preference number: 2 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHVFSKL*GASSTR
Trigger: ACGTGTGGAGGAAGCCCCTCATAATTTGGAGAAAAC...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAGCCATTCCAACAGGGTaGGGACCAGCCACCTACTTA +
Preference number: 2 (lower is better)
Translates to: VLYITMQGRDVSEQHVREAIPTG*GPATYL
Trigger: TAAGTAGGTGGCTGGTCCTCACCCTGTTGGAATGGC...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTATGGCGATTCCCTGGTaGAACCCCCAGATCTCCTGG +
Preference number: 2 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIMAIPW*NPQISW
Trigger: CCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCAT...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 90 bp ACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTaGCCTATCCCAGTACTTGAGTATTTTATGGGTTCTGCTCTAAGC +
Preference number: 2 (lower is better)
Translates to: TQRSLQGPIHSKHTC*PIPVLEYFMGSALS
Trigger: GCTTAGAGCAGAACCCATAAAATACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCACTTTGGGTTCCTCTTaGAATAATGAGGTCCCTAGA +
Preference number: 2 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACTLGSS*NNEVPR
Trigger: TCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGT...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTCACAGCCTCCTTCACTaGATTAGTGCAGAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIHSLLH*ISAEVN
Trigger: ATTGACTTCTGCACTAATCCAGTGAAGGAGGCTGTG...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTTGCCTTGTTAAGCTATaGTCCAAAAGGAAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPCLVKL*SKRKRS
Trigger: ACTCCTTTTCCTTTTGGATCATAGCTTAACAAGGCA...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMNLKSK*NSVLGS
Trigger: TGACCCAAGGACCGAATTTCATTTGGATTTCAAATT...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAGTATCTATGCTTATTaGCTGGGCCTCCTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNSIYAY*LGLLVA
Trigger: AGCCACCAGGAGGCCCAGCCAATAAGCATAGATACT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTTTGTGGGTCCTTCGTaGGGCAGCATCTATGTAGGA +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNFVGPS*GSIYVG
Trigger: TCCTACATAGATGCTGCCCCACGAAGGACCCACAAA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGAGAGCTTTTAAAACATaGTGGTCAAATATGGCGATT +
Preference number: 2 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMRAFKT*WSNMAI
Trigger: AATCGCCATATTTGACCAGCATGTTTTAAAAGCTCT...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACCATGCTGGTCAAATATaGCGATTCCCTGGTGCAACC +
Preference number: 2 (lower is better)
Translates to: FELKISAHNTTSYIQELDHAGQI*RFPGAT
Trigger: GGTTGCACCAGGGAATCGCCATATTTGACCAGCATG...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACACTAGGTTAGTTTTGTaGGTCCTTCGTGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: FELKISAHNTTSYIQELDTRLVL*VLRGAA
Trigger: TGCTGCCCCACGAAGGACCCACAAAACTAACCTAGT...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTCACAGCCTCCTTCACTaGATTAGTGCAGAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIHSLLH*ISAEVN
Trigger: ATTGACTTCTGCACTAATCCAGTGAAGGAGGCTGTG...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACGTTTTCTCCAAATTATaGGGGGCTTCCTCCACACGT +
Preference number: 2 (lower is better)
Translates to: FELKISAHNTTSYIQELDVFSKL*GASSTR
Trigger: ACGTGTGGAGGAAGCCCCTCATAATTTGGAGAAAAC...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTAATAGATGGGTCCCATaGTACCATATAGTATCTATG +
Preference number: 2 (lower is better)
Translates to: QAINNVQIGTGLCTHLIINRWVP*YHIVSM
Trigger: CATAGATACTATATGGTATCATGGGACCCATCTATT...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACGCCTATCCCAGTACTTaGGTATTTTATGGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LKISAHNTTSYIQELDLHAYPST*VFYGFC
Trigger: GCAGAACCCATAAAATACTCAAGTACTGGGATAGGC...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTCACAGTAAACACACATaGTTGCCTATCCCAGTACTT +
Preference number: 2 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIHSKHT*LPIPVL
Trigger: AAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTG...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTGCCTTGTTAAGCTATaGTCCAAAAGGAAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNCLVKL*SKRKRS
Trigger: ACTCCTTTTCCTTTTGGATCATAGCTTAACAAGGCA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 90 bp TCCTATTTCTTTCTAGCTTCCAGTAGAAGACTCTTGAGAATATTGTaGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCCTA +
Preference number: 2 (lower is better)
Translates to: SYFFLASSRRLLRIL*LSEVLSAEMGNEPL
Trigger: TAGGGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAAGAAATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCA +
Preference number: 2 (lower is better)
Translates to: LKISAHNTTSYIQELDLHNLKSK*NSVLGS
Trigger: TGACCCAAGGACCGAATTTCATTTGGATTTCAAATT...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTTGGAAAGCTTCAGTTaGATATGTTTGTTTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPLESFS*ICLFVA
Trigger: GGCCACAAACAAACATATTCAACTGAAGCTTTCCAA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR TCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTTTCTAAGAAGATTCTaGTATTCTGAGGGCATGTCA +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNFLRRF*YSEGMS
Trigger: TGACATGCCCTCAGAATATCAGAATCTTCTTAGAAA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTTGGCTTTCAAACACTaGAGCTATAACATATCCTTG +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNLAFKH*SYNISL
Trigger: CAAGGATATGTTATAGCTGCAGTGTTTGAAAGCCAA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATT +
Preference number: 2 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNSWKYD*FLVLYI
Trigger: AATATAAAGGACTAGGAAGCAGTCATACTTCCAGGA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 90 bp AATTCCTATTTCTTTCTAGCTTCCAGTAGAAGACTCTTGAGAATATaGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCC +
Preference number: 2 (lower is better)
Translates to: NSYFFLASSRRLLRI*LLSEVLSAEMGNEP
Trigger: GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAAGAAATAGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATT +
Preference number: 2 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPSWKYD*FLVLYI
Trigger: AATATAAAGGACTAGGAAGCAGTCATACTTCCAGGA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 90 bp ATGGACTTAAATTCCTATTTCTTTCTAGCTTCCAGTAGAAGACTCTaGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGA +
Preference number: 2 (lower is better)
Translates to: MDLNSYFFLASSRRL*RILLLSEVLSAEMG
Trigger: TCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAAGAAATAGGAATTTAAGTCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCAGAGCTTTTAAAACATaGTGGTCAAATATGGCGATT +
Preference number: 2 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPRAFKT*WSNMAI
Trigger: AATCGCCATATTTGACCAGCATGTTTTAAAAGCTCT...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAGTAAACACACATGCTaGCCTATCCCAGTACTTGAG +
Preference number: 3 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSKHTC*PIPVLE
Trigger: CTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp AAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTaGCTGGTTCACATGTTCTCACCCAAAGGAGCCTTC +
Preference number: 3 (lower is better)
Translates to: KLLGSNAPNKPG*LVHMFSPKGAF
Trigger: GAAGGCTCCTTTGGGTGAGAACATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CCA 72 bp ATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTaGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: INPKHHLSHRSF*AAMLQTNQGAW
Trigger: CCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp TTTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTaGAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCC +
Preference number: 3 (lower is better)
Translates to: FKTCWSNMAIPW*NPQISWSVRQP
Trigger: GGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp AGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATaGTCCAAACAAACCAGGGTGCCTGGTTCACATGTT +
Preference number: 3 (lower is better)
Translates to: STTYPIEASGQQ*SKQTRVPGSHV
Trigger: AACATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTaGACCCATCTGATCATTGCTCTACCTCCGGTTCTC +
Preference number: 3 (lower is better)
Translates to: QAINNVQIGTGL*THLIIALPPVL
Trigger: GAGAACCGGAGGTAGAGCAATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAAAACTCTTAAATCCTTaGGCTTTCAAACACTGCAGC +
Preference number: 3 (lower is better)
Translates to: SFTGLVQKSILREGCMATKLLNP*AFKHCS
Trigger: GCTGCAGTGTTTGAAAGCCAAAGGATTTAAGAGTTT...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp AGCATCTATGTAGGAGGCTGGACTTTGGGTTCCTCTTaGAATAATGAGGTCCCTAGAGGGATCCTTAGAACC +
Preference number: 3 (lower is better)
Translates to: SIYVGGWTLGSS*NNEVPRGILRT
Trigger: GGTTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGCCTCCTACATAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCAAACTCTTAAATCCTTaGGCTTTCAAACACTGCAGC +
Preference number: 3 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACKLLNP*AFKHCS
Trigger: GCTGCAGTGTTTGAAAGCCAAAGGATTTAAGAGTTT...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATGCAAATGTGTCCTGTTaGCTGTGTCCTGCCATCTCC +
Preference number: 3 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNANVSC*LCPAIS
Trigger: GGAGATGGCAGGACACAGCAAACAGGACACATTTGC...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp AAAGAACAGCATAGTAGGATAGCCATTCCAACAGGGTaGGGACCAGCCACCTACTTACTTTCCAGTCCAATT +
Preference number: 3 (lower is better)
Translates to: KEQHSRIAIPTG*GPATYLLSSPI
Trigger: AATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTGTTGGAATGGCTATCCTACTATGCTGTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp GCCTTCAGGGACCAATCCACAGTAAACACACATGCTTaGCTATCCCAGTACTTGAGTATTTTATGGGTTCTG +
Preference number: 3 (lower is better)
Translates to: AFRDQSTVNTHA*LSQYLSILWVL
Trigger: CAGAACCCATAAAATACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp AGGAGCCTTCAGGGACCAATCCACAGTAAACACACATaGTTGCCTATCCCAGTACTTGAGTATTTTATGGGT +
Preference number: 3 (lower is better)
Translates to: RSLQGPIHSKHT*LPIPVLEYFMG
Trigger: ACCCATAAAATACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp ACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTaGTCATTGCTCTACCTCCGGTTCTCTCTTTTAAAA +
Preference number: 3 (lower is better)
Translates to: TMFRLALVCAPI*SLLYLRFSLLK
Trigger: TTTTAAAAGAGAGAACCGGAGGTAGAGCAATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAATTCCCCCATCCTCTaGTTCAGTTCAACCCAGTTC +
Preference number: 3 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNNSPIL*FSSTQF
Trigger: GAACTGGGTTGAACTGAACAAGAGGATGGGGGAATT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTTAACAATGTTCAGATaGGCACTGGTCTGTGCACCC +
Preference number: 3 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNLTMFR*ALVCAP
Trigger: GGGTGCACAGACCAGTGCCAATCTGAACATTGTTAA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR GCA 72 bp GTCCACATGAATCCAAGCATTTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATTACCATGCAAGGTAGG +
Preference number: 3 (lower is better)
Translates to: VHMNPSISWKYD*FLVLYITMQGR
Trigger: CCTACCTTGCATGGTAATATAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATGCTTGGATTCATGTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTATTCATCATGTCATCTaGAAGGCTTTTCCACTCTGG +
Preference number: 3 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIIHHVI*KAFPLW
Trigger: CCAGAGTGGAAAAGCCTTCAAGATGACATGATGAAT...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp GTTGTCGAGAAAGGAGGGACCAGAAATCAGATGAACTaGGTAATTCATCATGTCATCTTGAAGGCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: VVEKGGTRNQMN*VIHHVILKAFP
Trigger: TGGAAAAGCCTTCAAGATGACATGATGAATTACTCAGTTCATCTGATTTCTGGTCCCTCCTTTCTCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp GAATGTCCACATGAATCCAAGCATTTCCTGGAAGTATaGCTGCTTCCTAGTCCTTTATATTACCATGCAAGG +
Preference number: 3 (lower is better)
Translates to: ECPHESKHFLEV*LLPSPLYYHAR
Trigger: CCTTGCATGGTAATATAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATGCTTGGATTCATGTGGACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACTTCCCTTCCTGTGCCTaGTTAAGCTATGATCCAAAA +
Preference number: 3 (lower is better)
Translates to: LKISAHNTTSYIQELDLHFPSCA*LSYDPK
Trigger: TTTTGGATCATAGCTTAACAAGGCACAGGAAGGGAA...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR-3UTR CAA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTCCCTTCCTGTGCCTaGTTAAGCTATGATCCAAAA +
Preference number: 3 (lower is better)
Translates to: FELKISAHNTTSYIQELDFPSCA*LSYDPK
Trigger: TTTTGGATCATAGCTTAACAAGGCACAGGAAGGGAA...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR TCA 72 bp GAAGGCTTTTCCACTCTGGACAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCAATTTATTCCATTACC +
Preference number: 3 (lower is better)
Translates to: EGFSTLDNLKSK*NSVLGSIYSIT
Trigger: GGTAATGGAATAAATTGACCCAAGGACCGAATTTCATTTGGATTTCAAATTGTCCAGAGTGGAAAAGCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTTGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPWQRPA*TPCRAL
Trigger: GAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCA...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGGCAGGCGGCGCAGCTaGTGCCCGCTGACCGACAGG +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACGRRRS*CPLTDR
Trigger: CCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCGCTTCCTCCACACGTTaGCCCACTTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPASSTR*PTCQPQ
Trigger: CTGAGGCTGGCAAGTGGGGCAACGTGTGGAGGAAGC...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTAGATGGCGGTCGTCATaGCAGCGGCCCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPRWRSS*QRPACT
Trigger: AGTGCATGCGGGCCGCTGCCATGACGACCGCCATCT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAGGTCGAGGCTGCAGTaGGCCGTGATTGCATCACTG +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPRSRLQ*AVIASL
Trigger: CAGTGATGCAATCACGGCTCACTGCAGCCTCGACCT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLPACTP*RALRTG
Trigger: CCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGG...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATAGGCGGCGCAGCTGCTaGCCGCTGACCGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHRRRSC*PLTDRV
Trigger: CACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAGCTCTGACTTGGACTaGAGCAGGTGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSSDLD*SRWARR
Trigger: CCTTCTGGCCCACCTGCTGCAGTCCAAGTCAGAGCT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTAGCAGAGGCAGGGAGTaGGTAGACGCCCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPSRGRE*VDAHGK
Trigger: CTTGCCATGGGCGTCTACCCACTCCCTGCCTCTGCT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCGCCATTCCAACAGGGTaGGGACCAGCCACCTACTTA +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPAIPTG*GPATYL
Trigger: TAAGTAGGTGGCTGGTCCTCACCCTGTTGGAATGGC...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPPACTP*RALRTG
Trigger: CCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGG...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTGGCAGGCGGCGCAGCTaGTGCCCGCTGACCGACAGG +
Preference number: 4 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIGRRRS*CPLTDR
Trigger: CCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCC...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAGGTGTGGTACCAGGCTaGTTGCTCCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATGVVPG*LLLAAS
Trigger: GCTGGCTGCCAGGAGCAAGCAGCCTGGTACCACACC...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAAGGGGTCCATGGCGCTaGAGGAAGATCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATRGPWR*RKISCR
Trigger: GCGGCAGGAGATCTTCCTGCAGCGCCATGGACCCCT...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTCTGGCCTTGACTTTGTaGCTCAGAAGGGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPLALTL*LRRAAV
Trigger: CACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAG...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAGGTAGTCCAGGAGGATaGCCTCCAGCTGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATGSPGG*PPAGRA
Trigger: CGCTCTCCCAGCTGGAGGCCATCCTCCTGGACTACC...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCTCAGGGAGGGCTGCATaGCCACAACACATCAATCCC +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSGRAA*PQHINP
Trigger: GGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGA...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCGACAGATCTTCCTCATaGCTGGATAAGGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPDRSSS*LDKASG
Trigger: ACCGGAGGCCTTATCCAGTCATGAGGAAGATCTGTC...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGTGGCAGCCAGCCAGGTaGCAGAGCGCCACACGGTGT +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMWQPAR*QSATRC
Trigger: ACACCGTGTGGCGCTCTGTCACCTGGCTGGCTGCCA...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGTGGCAGCCAGCCAGGTaGCAGAGCGCCACACGGTGT +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLWQPAR*QSATRC
Trigger: ACACCGTGTGGCGCTCTGTCACCTGGCTGGCTGCCA...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTCAGTGCAAGGCATCTTaGGAAGCCCATCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPQCKAS*EAHPPG
Trigger: TCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTG...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCGGGCACATCCGTTTCTaGGACAGTGCAAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPGHIRF*DSARHL
Trigger: AAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCC...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGGTGGGTAGACGCCCATaGCAAGGCCTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMVGRRP*QGLSLG
Trigger: GCCGAGGCTGAGGCCTTGCCATGGGCGTCTACCCAC...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCTCTATGCTTATTGGCTaGGCCTCCTGGTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSMLIG*ASWWLL
Trigger: CAAGAGCCACCAGGAGGCCCAGCCAATAAGCATAGA...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTTGCAAGGTAGGGATGTaGGTGAACAGCACGTCAGAG +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPCKVGM*VNSTSE
Trigger: CTCTGACGTGCTGTTCACTCACATCCCTACCTTGCA...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTAGCTCTGACTTGGACTaGAGCAGGTGGGCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGSSDLD*SRWARR
Trigger: CCTTCTGGCCCACCTGCTGCAGTCCAAGTCAGAGCT...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAACCTCAGGACAGGGTATaGAACCGGCAGGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEPQDRV*NRQGRR
Trigger: CCGCCGCCCCTGCCGGTTGCATACCCTGTCCTGAGG...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442253.3
CDS-3UTR CCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATCATCCTCCAGGATCTTaGGCAGGCGGCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHHPPGS*AGGAAA
Trigger: AGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATG...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGGCTCCCGGAAGAGCTaGGGCACATCCGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACGSRKS*GTSVSG
Trigger: CCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTGCCACTCGTGCCCCGTaGGGCGGTAGCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIATRAP*GGSRCG
Trigger: TCCGCACCGGCTACCGCCCCACGGGGCACGAGTGGC...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGGTAGTCCAGGAGGATaGCCTCCAGCTGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACGSPGG*PPAGRA
Trigger: CGCTCTCCCAGCTGGAGGCCATCCTCCTGGACTACC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGTCAGAAGGGCTGCGGTaGCAGCACTGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLSEGLR*QHCRQP
Trigger: TGGCTGCCTGCAGTGCTGCCACCGCAGCCCTTCTGA...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCCTGCGGTGGCAGCACTaGAGGCAGCCAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACLRWQH*RQPGRR
Trigger: TCTTCTTCCTGGCTGCCTGCAGTGCTGCCACCGCAG...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACGCAGCTGCTGCCCGCTaGCCGACAGGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHAAAAR*PTGCSG
Trigger: GCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGC...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPWQRPA*TPCRAL
Trigger: GAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATCTGGCCTTGACTTTGTaGCTCAGAAGGGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHLALTL*LRRAAV
Trigger: CACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAG...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGATGGCGATTCCCTGGTaGAACCCCCAGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMMAIPW*NPQISW
Trigger: CCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCAT...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTGCTTCTGGGCAGCAATaGTCCAAACAAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGASGQQ*SKQTRV
Trigger: CACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGC...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATATGCAACTCAGTGTTaGCAGCCAACTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATYATQC*QPTGSQ
Trigger: CTGGGAGCCAGTTGGCTGCCAACACTGAGTTGCATA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS-3UTR CCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACGCCACTCGTGCCCCGTaGGGCGGTAGCCGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDATRAP*GGSRCG
Trigger: TCCGCACCGGCTACCGCCCCACGGGGCACGAGTGGC...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCGTGGGTAGACGCCCATaGCAAGGCCTCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFVGRRP*QGLSLG
Trigger: GCCGAGGCTGAGGCCTTGCCATGGGCGTCTACCCAC...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGGAGAGGCAGGCCATGTaGACAGATAGGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLERQAM*TDRGPW
Trigger: CCATGGACCCCTATCTGTCCACATGGCCTGCCTCTC...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATGAGAGGCAGGCCATGTaGACAGATAGGGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHERQAM*TDRGPW
Trigger: CCATGGACCCCTATCTGTCCACATGGCCTGCCTCTC...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATCTATGCTTATTGGCTaGGCCTCCTGGTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATSMLIG*ASWWLL
Trigger: CAAGAGCCACCAGGAGGCCCAGCCAATAAGCATAGA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGTGGTCAGTCTGGCCTTaGCTTTGTGCCTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLWSVWP*LCASEG
Trigger: CCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCA...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAAGGGGTCCATGGCGCTaGAGGAAGATCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVRERGPWR*RKISCR
Trigger: GCGGCAGGAGATCTTCCTGCAGCGCCATGGACCCCT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTCTGCGGTGGCAGCACTaGAGGCAGCCAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVLRWQH*RQPGRR
Trigger: TCTTCTTCCTGGCTGCCTGCAGTGCTGCCACCGCAG...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTCACCCATCTGATCATTaGTCTACCTCCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGHPSDH*STSGSL
Trigger: GAGAGAACCGGAGGTAGAGCAATGATCAGATGGGTG...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGCAGTGAGCCGTGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACAVSRD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCACGGCTCACTGC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGGCAGTGAGCCGTGATTaGATCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLAVSRD*ITALQP
Trigger: AGGCTGGAGTGCAGTGATGCAATCACGGCTCACTGC...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCAGTGCAAGGCATCTTaGGAAGCCCATCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLQCKAS*EAHPPG
Trigger: TCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTG...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGACAGATAGGGGTCCATaGCGCTGCAGGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLTDRGP*RCRKIS
Trigger: GGAGATCTTCCTGCAGCGCCATGGACCCCTATCTGT...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGTCAGGGAGGGCTGCATaGCCACAACACATCAATCCC +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMSGRAA*PQHINP
Trigger: GGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGA...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATGACAGATCTTCCTCATaGCTGGATAAGGCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHDRSSS*LDKASG
Trigger: ACCGGAGGCCTTATCCAGTCATGAGGAAGATCTGTC...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCCCTGCTGGCACCACTTaGCAGATCTTCCTCATGACT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACPAGTT*QIFLMT
Trigger: AGTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGG...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATAATGCATGGAAGATCTaGTGCCCATGGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHNAWKI*CPWPTM
Trigger: CATCGTGGGCCATGGGCATCAGATCTTCCATGCATT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCTTGGAAAGCTTCAGTTaGATATGTTTGTTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPLESFS*ICLFVA
Trigger: GGCCACAAACAAACATATTCAACTGAAGCTTTCCAA...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAAGATTCTGATATTCTaGGGGCATGTCATAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPKILIF*GHVIES
Trigger: AGACTCTATGACATGCCCTCAGAATATCAGAATCTT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTGATAAAAGCCAGACCTaGTGGCACCACTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGDKSQT*WHHLTD
Trigger: ATCTGTCAAGTGGTGCCAGCAGGTCTGGCTTTTATC...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTATGGCAATATCTTCATaGCTGTTCCTGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPMAISS*LFLCSS
Trigger: TGATGAGCACAGGAACAGGCATGAAGATATTGCCAT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAGTCTCCTACCTCAATaGCTCTCAAATATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSLLPQ*LSNISY
Trigger: ATAGGAGATATTTGAGAGGCATTGAGGTAGGAGACT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTGTGTTGGCAGCCAACTaGCTCCCAGGTGAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIVLAAN*LPGEEN
Trigger: GTTCTCCTCACCTGGGAGCCAGTTGGCTGCCAACAC...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS-3UTR CCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGGGCACATCCGTTTCTaGGACAGTGCAAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACGHIRF*DSARHL
Trigger: AAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAAAGGATCTGGAGGGTGTaGTACCAGGCTGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLERIWRV*YQAACS
Trigger: GGAGCAAGCAGCCTGGTACCACACCCTCCAGATCCT...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATGTTCAGATTGGCACTaGTCTGTGCACCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATCSDWH*SVHPSD
Trigger: ATCAGATGGGTGCACAGACCAGTGCCAATCTGAACA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAACAACTGGCTCCCAGGTaGGGAGAACATTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEQLAPR*GEHFWQ
Trigger: CTGCCAGAAATGTTCTCCTCACCTGGGAGCCAGTTG...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGGTGAGGTAAGTGATTaGCGACAGGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACGEVSD*RQDEEE
Trigger: CTCCTCTTCATCCTGTCGTCAATCACTTACCTCACC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCGTAGTGGGAGAGCTCTaGCTTGGACTGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFVVGEL*LGLQQV
Trigger: CACCTGCTGCAGTCCAAGTCAGAGCTCTCCCACTAC...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAATAGATGGGTCCCATaGTACCATATAGTATCTATG +
Preference number: 4 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPNRWVP*YHIVSM
Trigger: CATAGATACTATATGGTATCATGGGACCCATCTATT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTCCGTTTCTGGGACAGTaGAAGGCATCTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIPFLGQ*KASWEA
Trigger: GGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGG...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTCCGTTTCTGGGACAGTaGAAGGCATCTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVPFLGQ*KASWEA
Trigger: GGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGG...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTAGTCTCCTACCTCAATaGCTCTCAAATATCTCCTAT +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPSLLPQ*LSNISY
Trigger: ATAGGAGATATTTGAGAGGCATTGAGGTAGGAGACT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACCATCCTCCAGGATCTTaGGCAGGCGGCGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHHPPGS*AGGAAA
Trigger: AGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATG...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATGGCTCCCGGAAGAGCTaGGGCACATCCGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNGSRKS*GTSVSG
Trigger: CCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCC...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTGGGAGAGCTCTGACTTaGACTGCAGCAGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIGRALT*TAAGGP
Trigger: TGGCCCACCTGCTGCAGTCCAAGTCAGAGCTCTCCC...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCGATCTTCCTCATGACTaGATAAGGCCTCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACDLPHD*IRPPVT
Trigger: CGTTACCGGAGGCCTTATCCAGTCATGAGGAAGATC...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGGATCTTCCTCATGACTaGATAAGGCCTCCGGTAACG +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMDLPHD*IRPPVT
Trigger: CGTTACCGGAGGCCTTATCCAGTCATGAGGAAGATC...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTACAGATAGGGGTCCATaGCGCTGCAGGAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: QAINNVQIGTGLCTHLIITDRGP*RCRKIS
Trigger: GGAGATCTTCCTGCAGCGCCATGGACCCCTATCTGT...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAATGGTCAGTCTGGCCTTaGCTTTGTGCCTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREWSVWP*LCASEG
Trigger: CCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCA...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTCATTTCCTGGAAGTATaGCTGCTTCCTAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGHFLEV*LLPSPL
Trigger: TAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATG...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAGTCTGTGCACCCATCTaGTCATTGCTCTACCTCCGG +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREVCAPI*SLLYLR
Trigger: CCGGAGGTAGAGCAATGATCAGATGGGTGCACAGAC...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTTTTCTAAGAAGATTCTaGTATTCTGAGGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPFLRRF*YSEGMS
Trigger: TGACATGCCCTCAGAATATCAGAATCTTCTTAGAAA...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCGGTGTGGTACCAGGCTaGTTGCTCCTGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPGVVPG*LLLAAS
Trigger: GCTGGCTGCCAGGAGCAAGCAGCCTGGTACCACACC...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACGCTTCCTCCACACGTTaGCCCACTTGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHASSTR*PTCQPQ
Trigger: CTGAGGCTGGCAAGTGGGGCAACGTGTGGAGGAAGC...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATATTGGCACTGGTCTGTaGACCCATCTGATCATTGCT +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHIGTGL*THLIIA
Trigger: AGCAATGATCAGATGGGTGCACAGACCAGTGCCAAT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTTCATGCCTGTTCCTGTaGTCATCATGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPSCLFL*SSCHRP
Trigger: TGGCCTGTGACATGATGAGCACAGGAACAGGCATGA...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTAGATGGCGGTCGTCATaGCAGCGGCCCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFRWRSS*QRPACT
Trigger: AGTGCATGCGGGCCGCTGCCATGACGACCGCCATCT...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTCAGGCGCTCCAAGATaGCGGTCGTCATGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPSGAPR*RSSWQR
Trigger: CCGCTGCCATGACGACCGCCATCTTGGAGCGCCTGA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAAGGGCTGCCAGTAAATaGGTCCAGACGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVRERAASK*VQTLTT
Trigger: GGTGGTCAACGTCTGGACCCATTTACTGGCAGCCCT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATGGGAGAGCTCTGACTTaGACTGCAGCAGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNGRALT*TAAGGP
Trigger: TGGCCCACCTGCTGCAGTCCAAGTCAGAGCTCTCCC...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTCAGAAGGGCTGCGGTaGCAGCACTGCAGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPSEGLR*QHCRQP
Trigger: TGGCTGCCTGCAGTGCTGCCACCGCAGCCCTTCTGA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTAATATGGCGATTCCCTaGTGCAACCCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVNMAIP*CNPQIS
Trigger: GGAGATCTGGGGGTTGCACCAGGGAATCGCCATATT...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGTCCCATAGAAGCTTCTaGGCAGCAATGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMSHRSF*AAMLQT
Trigger: TGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGA...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTGGTGAGGTAAGTGATTaGCGACAGGATGAAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVGEVSD*RQDEEE
Trigger: CTCCTCTTCATCCTGTCGTCAATCACTTACCTCACC...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATGCCTTGTTAAGCTATaGTCCAAAAGGAAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATCLVKL*SKRKRS
Trigger: ACTCCTTTTCCTTTTGGATCATAGCTTAACAAGGCA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCTGGAGGGGCTATGGTTaGATAAGCCATCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACWRGYG*ISHLLY
Trigger: ATAAAGGAGATGGCTTATTCAACCATAGCCCCTCCA...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCTCTGGAGGATCCATTTaGAACTACAGTGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACSGGSI*NYSAVT
Trigger: GGTTACTGCACTGTAGTTTCAAATGGATCCTCCAGA...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCACACGTTGCCCCACTTaGCAGCCTCAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFTRCPT*QPQESF
Trigger: GAAAGATTCCTGAGGCTGGCAAGTGGGGCAACGTGT...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTCCAAACAAACCAGGGTaGCTGGTTCACATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPPNKPG*LVHMFS
Trigger: TGAGAACATGTGAACCAGGCACCCTGGTTTGTTTGG...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTAGCAGAGGCAGGGAGTaGGTAGACGCCCATGGCAAG +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFSRGRE*VDAHGK
Trigger: CTTGCCATGGGCGTCTACCCACTCCCTGCCTCTGCT...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAGGATCTGGAGGGTGTaGTACCAGGCTGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNRIWRV*YQAACS
Trigger: GGAGCAAGCAGCCTGGTACCACACCCTCCAGATCCT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAGGATGGCCTCCAGCTaGGAGAGCGTACAGATGGAC +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNRMASS*ESVQMD
Trigger: GTCCATCTGTACGCTCTCCCAGCTGGAGGCCATCCT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACAGGATGGCCTCCAGCTaGGAGAGCGTACAGATGGAC +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHRMASS*ESVQMD
Trigger: GTCCATCTGTACGCTCTCCCAGCTGGAGGCCATCCT...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAAAGTATCTATGCTTATTaGCTGGGCCTCCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLESIYAY*LGLLVA
Trigger: AGCCACCAGGAGGCCCAGCCAATAAGCATAGATACT...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAATTTGTGGGTCCTTCGTaGGGCAGCATCTATGTAGGA +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEFVGPS*GSIYVG
Trigger: TCCTACATAGATGCTGCCCCACGAAGGACCCACAAA...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAGACATGAATGCCATCTaGAGGATCCATTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATDMNAI*RIHLKL
Trigger: TAGTTTCAAATGGATCCTCCAGATGGCATTCATGTC...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAAGTTTCTGAAAGAGGCTaGAGAAGTAGTAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEVSERG*RSSSAT
Trigger: AGTGGCGCTACTACTTCTTCAGCCTCTTTCAGAAAC...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTGTAGTGGGAGAGCTCTaGCTTGGACTGCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFVVGEL*LGLQQV
Trigger: CACCTGCTGCAGTCCAAGTCAGAGCTCTCCCACTAC...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACGCCATTCCAACAGGGTaGGGACCAGCCACCTACTTA +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHAIPTG*GPATYL
Trigger: TAAGTAGGTGGCTGGTCCTCACCCTGTTGGAATGGC...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGNLKSK*NSVLGS
Trigger: TGACCCAAGGACCGAATTTCATTTGGATTTCAAATT...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATACTTTGGGTTCCTCTTaGAATAATGAGGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHTLGSS*NNEVPR
Trigger: TCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTTTTCTAGGGCAGGCGTaGTGGCTAATGTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVFLGQA*WLMSVI
Trigger: GATTACAGACATTAGCCATCACGCCTGCCCTAGAAA...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATTTCTAAGAAGATTCTaGTATTCTGAGGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATFLRRF*YSEGMS
Trigger: TGACATGCCCTCAGAATATCAGAATCTTCTTAGAAA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGAATGAGCCAAAGCACTaGCATATTGGTAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLNEPKH*HIGKRS
Trigger: TGAGCGTTTACCAATATGGCAGTGCTTTGGCTCATT...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATTGGCTTTCAAACACTaGAGCTATAACATATCCTTG +
Preference number: 4 (lower is better)
Translates to: SFTGLVQKSILREGCMATLAFKH*SYNISL
Trigger: CAAGGATATGTTATAGCTGCAGTGTTTGAAAGCCAA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCATGGCGATTCCCTGGTaGAACCCCCAGATCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPMAIPW*NPQISW
Trigger: CCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCAT...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAACCAAACAAACCAGGGTaGCTGGTTCACATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEPNKPG*LVHMFS
Trigger: TGAGAACATGTGAACCAGGCACCCTGGTTTGTTTGG...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCCACCCATCTGATCATTaGTCTACCTCCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFHPSDH*STSGSL
Trigger: GAGAGAACCGGAGGTAGAGCAATGATCAGATGGGTG...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAGGGCTGCCAGTAAATaGGTCCAGACGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNRAASK*VQTLTT
Trigger: GGTGGTCAACGTCTGGACCCATTTACTGGCAGCCCT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTAAAAGCCAGACCTGCTaGCACCACTTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVKSQTC*HHLTDL
Trigger: AAGATCTGTCAAGTGGTGCCAGCAGGTCTGGCTTTT...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAACATGCTGGTCAAATATaGCGATTCCCTGGTGCAACC +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREHAGQI*RFPGAT
Trigger: GGTTGCACCAGGGAATCGCCATATTTGACCAGCATG...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAACTAGGTTAGTTTTGTaGGTCCTTCGTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVRETRLVL*VLRGAA
Trigger: TGCTGCCCCACGAAGGACCCACAAAACTAACCTAGT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCACTAGGTTAGTTTTGTaGGTCCTTCGTGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFTRLVL*VLRGAA
Trigger: TGCTGCCCCACGAAGGACCCACAAAACTAACCTAGT...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTTCCCATAGAAGCTTCTaGGCAGCAATGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: QAINNVQIGTGLCTHLIISHRSF*AAMLQT
Trigger: TGTTTGGAGCATTGCTGCCCAGAAGCTTCTATGGGA...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTGCAAGGTAGGGATGTaGGTGAACAGCACGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNCKVGM*VNSTSE
Trigger: CTCTGACGTGCTGTTCACTCACATCCCTACCTTGCA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGTTGGAAAGCTTCAGTTaGATATGTTTGTTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMLESFS*ICLFVA
Trigger: GGCCACAAACAAACATATTCAACTGAAGCTTTCCAA...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCAGAAAACAATGTAGCTaGCAAGACGCATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACRKQCS*QDACFL
Trigger: AAGAAAGCATGCGTCTTGTCAGCTACATTGTTTTCT...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTGTCTGTGCACCCATCTaGTCATTGCTCTACCTCCGG +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFVCAPI*SLLYLR
Trigger: CCGGAGGTAGAGCAATGATCAGATGGGTGCACAGAC...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCAAATTTCCAACCACTTaGGGGGCCAATACTTGTATA +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACKFPTT*GANTCI
Trigger: TATACAAGTATTGGCCCCTCAAGTGGTTGGAAATTT...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACACACGTTGCCCCACTTaGCAGCCTCAGGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHTRCPT*QPQESF
Trigger: GAAAGATTCCTGAGGCTGGCAAGTGGGGCAACGTGT...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTCACAGTAAACACACATaGTTGCCTATCCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPHSKHT*LPIPVL
Trigger: AAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTG...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAATTGGCACTGGTCTGTaGACCCATCTGATCATTGCT +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREIGTGL*THLIIA
Trigger: AGCAATGATCAGATGGGTGCACAGACCAGTGCCAAT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAAAAAGCCAGACCTGCTaGCACCACTTGACAGATCTT +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREKSQTC*HHLTDL
Trigger: AAGATCTGTCAAGTGGTGCCAGCAGGTCTGGCTTTT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACAATATGGCGATTCCCTaGTGCAACCCCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHNMAIP*CNPQIS
Trigger: GGAGATCTGGGGGTTGCACCAGGGAATCGCCATATT...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTCATGCTGGTCAAATATaGCGATTCCCTGGTGCAACC +
Preference number: 4 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIHAGQI*RFPGAT
Trigger: GGTTGCACCAGGGAATCGCCATATTTGACCAGCATG...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAACTTTTTGTGAACAGGTaGGCAACACAGGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLELFVNR*ATQAGI
Trigger: TATTCCTGCCTGTGTTGCCCACCTGTTCACAAAAAG...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTCTTTTTGTGAACAGGTaGGCAACACAGGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVLFVNR*ATQAGI
Trigger: TATTCCTGCCTGTGTTGCCCACCTGTTCACAAAAAG...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp GTTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGGACATGAATGCCATCTaGAGGATCCATTTGAAACTA +
Preference number: 4 (lower is better)
Translates to: VLTQRSLQGPIHSKHTCLDMNAI*RIHLKL
Trigger: TAGTTTCAAATGGATCCTCCAGATGGCATTCATGTC...CAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 72 bp TCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTaGACTTACACCTTCTTCCCTTCTGCTCTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLPTIPPVIFKS*TYTFFPSALFP
Trigger: AGGGAAGAGAGCAGAAGGGAAGAAGGTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTCCTGCTGGCACCACTTaGCAGATCTTCCTCATGACT +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFPAGTT*QIFLMT
Trigger: AGTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGG...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACAATGCATGGAAGATCTaGTGCCCATGGCCCACGATG +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDNAWKI*CPWPTM
Trigger: CATCGTGGGCCATGGGCATCAGATCTTCCATGCATT...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTACTTTGGGTTCCTCTTaGAATAATGAGGTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVTLGSS*NNEVPR
Trigger: TCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGT...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCTTTCTGAGTAAGACATaGATGCCATCTGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFFLSKT*MPSGGS
Trigger: GGATCCTCCAGATGGCATTCATGTCTTACTCAGAAA...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTGATAAAAGCCAGACCTaGTGGCACCACTTGACAGAT +
Preference number: 4 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIDKSQT*WHHLTD
Trigger: ATCTGTCAAGTGGTGCCAGCAGGTCTGGCTTTTATC...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATT +
Preference number: 4 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACSWKYD*FLVLYI
Trigger: AATATAAAGGACTAGGAAGCAGTCATACTTCCAGGA...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACGCTTCTGGGCAGCAATaGTCCAAACAAACCAGGGTG +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDASGQQ*SKQTRV
Trigger: CACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGC...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATTCATGCCTGTTCCTGTaGTCATCATGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNSCLFL*SSCHRP
Trigger: TGGCCTGTGACATGATGAGCACAGGAACAGGCATGA...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACGTTTCTGAAAGAGGCTaGAGAAGTAGTAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHVSERG*RSSSAT
Trigger: AGTGGCGCTACTACTTCTTCAGCCTCTTTCAGAAAC...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACAATGGGTCCAGACGTTaGCCACCTCGTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDNGSRR*PPRCVS
Trigger: AGAAACACAACGAGGTGGTCAACGTCTGGACCCATT...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACGTTTTCTCCAAATTATaGGGGGCTTCCTCCACACGT +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHVFSKL*GASSTR
Trigger: ACGTGTGGAGGAAGCCCCTCATAATTTGGAGAAAAC...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTAGAAAACAATGTAGCTaGCAAGACGCATGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVRKQCS*QDACFL
Trigger: AAGAAAGCATGCGTCTTGTCAGCTACATTGTTTTCT...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTTCCTGGAAGTATGACTaGTTCCTAGTCCTTTATATT +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPSWKYD*FLVLYI
Trigger: AATATAAAGGACTAGGAAGCAGTCATACTTCCAGGA...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATAGAGCTTTTAAAACATaGTGGTCAAATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHRAFKT*WSNMAI
Trigger: AATCGCCATATTTGACCAGCATGTTTTAAAAGCTCT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCGTAAACACACATGCTTaGCTATCCCAGTACTTGAGT +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFVNTHA*LSQYLS
Trigger: ACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTAC...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAACACAGTAAACACACATaGTTGCCTATCCCAGTACTT +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVREHSKHT*LPIPVL
Trigger: AAGTACTGGGATAGGCAAGCATGTGTGTTTACTGTG...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCAGTATCTATGCTTATTaGCTGGGCCTCCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPSIYAY*LGLLVA
Trigger: AGCCACCAGGAGGCCCAGCCAATAAGCATAGATACT...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTTTTGTGGGTCCTTCGTaGGGCAGCATCTATGTAGGA +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFFVGPS*GSIYVG
Trigger: TCCTACATAGATGCTGCCCCACGAAGGACCCACAAA...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACTGTTCAGATTGGCACTaGTCTGTGCACCCATCTGAT +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHCSDWH*SVHPSD
Trigger: ATCAGATGGGTGCACAGACCAGTGCCAATCTGAACA...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCTGCCTTGTTAAGCTATaGTCCAAAAGGAAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFCLVKL*SKRKRS
Trigger: ACTCCTTTTCCTTTTGGATCATAGCTTAACAAGGCA...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAAAATTTGAAATCCAAATaGAATTCGGTCCTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLENLKSK*NSVLGS
Trigger: TGACCCAAGGACCGAATTTCATTTGGATTTCAAATT...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTAGAGCTTTTAAAACATaGTGGTCAAATATGGCGATT +
Preference number: 4 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPRAFKT*WSNMAI
Trigger: AATCGCCATATTTGACCAGCATGTTTTAAAAGCTCT...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAAATAGATGGGTCCCATaGTACCATATAGTATCTATG +
Preference number: 4 (lower is better)
Translates to: VLYITMQGRDVSEQHVRENRWVP*YHIVSM
Trigger: CATAGATACTATATGGTATCATGGGACCCATCTATT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTGCCTATCCCAGTACTTaGGTATTTTATGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFAYPST*VFYGFC
Trigger: GCAGAACCCATAAAATACTCAAGTACTGGGATAGGC...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTGGAGGGGCTATGGTTaGATAAGCCATCTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDWRGYG*ISHLLY
Trigger: ATAAAGGAGATGGCTTATTCAACCATAGCCCCTCCA...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTTCTGGAGGATCCATTTaGAACTACAGTGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFSGGSI*NYSAVT
Trigger: GGTTACTGCACTGTAGTTTCAAATGGATCCTCCAGA...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTTCTGAGTAAGACATaGATGCCATCTGGAGGATCC +
Preference number: 4 (lower is better)
Translates to: FELKISAHNTTSYIQELDFLSKT*MPSGGS
Trigger: GGATCCTCCAGATGGCATTCATGTCTTACTCAGAAA...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACAATGAGCCAAAGCACTaGCATATTGGTAAACGCTCA +
Preference number: 4 (lower is better)
Translates to: LKISAHNTTSYIQELDLHNEPKH*HIGKRS
Trigger: TGAGCGTTTACCAATATGGCAGTGCTTTGGCTCATT...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTCATTTCCTGGAAGTATaGCTGCTTCCTAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFHFLEV*LLPSPL
Trigger: TAAAGGACTAGGAAGCAGTCATACTTCCAGGAAATG...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATAAATTTCCAACCACTTaGGGGGCCAATACTTGTATA +
Preference number: 4 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNKFPTT*GANTCI
Trigger: TATACAAGTATTGGCCCCTCAAGTGGTTGGAAATTT...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR TCA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACAAGATTCTGATATTCTaGGGGCATGTCATAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHKILIF*GHVIES
Trigger: AGACTCTATGACATGCCCTCAGAATATCAGAATCTT...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCGTAAACACACATGCTTaGCTATCCCAGTACTTGAGT +
Preference number: 4 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPVNTHA*LSQYLS
Trigger: ACTCAAGTACTGGGATAGGCAAGCATGTGTGTTTAC...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTATGGCAATATCTTCATaGCTGTTCCTGTGCTCATCA +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFMAISS*LFLCSS
Trigger: TGATGAGCACAGGAACAGGCATGAAGATATTGCCAT...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 72 bp CTACTAACAACGTATTTGCACAATTCCCCCATCCTCTaGTTCAGTTCAACCCAGTTCAGTTTTGCTAATTTT +
Preference number: 4 (lower is better)
Translates to: LLTTYLHNSPIL*FSSTQFSFANF
Trigger: AAAATTAGCAAAACTGAACTGGGTTGAACTGAACAAGAGGATGGGGGAATTGTGCAAATACGTTGTTAGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 72 bp TTCTTTCTAGCTTCCAGTAGAAGACTCTTGAGAATATaGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGA +
Preference number: 4 (lower is better)
Translates to: FFLASSRRLLRI*LLSEVLSAEMG
Trigger: TCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR GCA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTTTGGCTTTCAAACACTaGAGCTATAACATATCCTTG +
Preference number: 4 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFLAFKH*SYNISL
Trigger: CAAGGATATGTTATAGCTGCAGTGTTTGAAAGCCAA...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 72 bp TTTCTAGCTTCCAGTAGAAGACTCTTGAGAATATTGTaGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: FLASSRRLLRIL*LSEVLSAEMGN
Trigger: ATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
3UTR CAA 72 bp AATTCCTATTTCTTTCTAGCTTCCAGTAGAAGACTCTaGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCT +
Preference number: 4 (lower is better)
Translates to: NSYFFLASSRRL*RILLLSEVLSA
Trigger: AGCGGAAAGTACTTCACTCAACAACAATATTCTCAAGAGTCTTCTACTGGAAGCTAGAAAGAAATAGGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 90 bp GCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACCGGCAGGGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: APRWRSSWQRPACTP*RALRTGYATGRGGG
Trigger: GCCGCCGCCCCTGCCGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442253.3
CDS TCA 90 bp GCCCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTGCTGCCCGCTaGCCGACAGGGTGCTCAGGCGCTCCAAGATGGCGGTCGTCATGG +
Preference number: 5 (lower is better)
Translates to: AHPPGSWAGGAAAAR*PTGCSGAPRWRSSW
Trigger: CCATGACGACCGCCATCTTGGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 90 bp TGCTCAGGCGCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTCAGGACAGGGTATGCAACCGGCAGG +
Preference number: 5 (lower is better)
Translates to: CSGAPRWRSSWQRPA*TPCRALRTGYATGR
Trigger: CCTGCCGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGCGCCTGAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442253.3
CDS GCA 90 bp TTGGGAAGCCCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTGCTaGCCGCTGACCGACAGGGTGCTCAGGCGCTCCAAGATGGCGGTC +
Preference number: 5 (lower is better)
Translates to: LGSPSSRILGRRRSC*PLTDRVLRRSKMAV
Trigger: GACCGCCATCTTGGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 90 bp ATCTTGGGAAGCCCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTaGTGCCCGCTGACCGACAGGGTGCTCAGGCGCTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: ILGSPSSRILGRRRS*CPLTDRVLRRSKMA
Trigger: CGCCATCTTGGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 90 bp TGCTCAGGCGCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTCAGGACAGGGTATGCAACCTGCAGA +
Preference number: 5 (lower is better)
Translates to: CSGAPRWRSSWQRPA*TPCRALRTGYATCR
Trigger: TCTGCAGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGCGCCTGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS GCA 90 bp GCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACTCAGTGTTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: APRWRSSWQRPACTP*RALRTGYATQCWQP
Trigger: TGGCTGCCAACACTGAGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS GCA 90 bp TGCTCAGGCGCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTCAGGACAGGGTATGCAACTCAGTGT +
Preference number: 5 (lower is better)
Translates to: CSGAPRWRSSWQRPA*TPCRALRTGYATQC
Trigger: ACACTGAGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGCGCCTGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS GCA 90 bp GCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACCTGCAGAAGATCCCAC +
Preference number: 5 (lower is better)
Translates to: APRWRSSWQRPACTP*RALRTGYATCRRSH
Trigger: GTGGGATCTTCTGCAGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS TCA 90 bp TGGAGGGTGTGGTACCAGGCTGCTTGCTCCTGGCAGCCAGCCAGGTaGCAGAGCGCCACACGGTGTGCCACAGGGCTGATGTCTAGGATA +
Preference number: 5 (lower is better)
Translates to: WRVWYQAACSWQPAR*QSATRCATGLMSRI
Trigger: TATCCTAGACATCAGCCCTGTGGCACACCGTGTGGCGCTCTGTCACCTGGCTGGCTGCCAGGAGCAAGCAGCCTGGTACCACACCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 90 bp GGCGCTGCAGGAAGATCTCCTGCCGCCCCTGGTAGTCCAGGAGGATaGCCTCCAGCTGGGAGAGCGTACAGATGGACAGAAATGCATGGA +
Preference number: 5 (lower is better)
Translates to: GAAGRSPAAPGSPGG*PPAGRAYRWTEMHG
Trigger: TCCATGCATTTCTGTCCATCTGTACGCTCTCCCAGCTGGAGGCCATCCTCCTGGACTACCAGGGGCGGCAGGAGATCTTCCTGCAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 90 bp TGTAAGGCTCCCGGAAGAGCTGGGGCACATCCGTTTCTGGGACAGTaGAAGGCATCTTGGGAAGCCCATCCTCCAGGATCTTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CKAPGRAGAHPFLGQ*KASWEAHPPGSWAG
Trigger: GCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 90 bp TGCCAGCCTCAGGAATCTTTCTTGGTCAGTCTGGCCTTGACTTTGTaGCTCAGAAGGGCTGCGGTGGCAGCACTGCAGGCAGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: CQPQESFLVSLALTL*LRRAAVAALQAARK
Trigger: CTTCCTGGCTGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 90 bp GGTGCGGATGTAAGGCTCCCGGAAGAGCTGGGGCACATCCGTTTCTaGGACAGTGCAAGGCATCTTGGGAAGCCCATCCTCCAGGATCTT +
Preference number: 5 (lower is better)
Translates to: GADVRLPEELGHIRF*DSARHLGKPILQDL
Trigger: AAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCCTTACATCCGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS-3UTR CAA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAGTCTGGCCTTGACTTaGTGCCTCAGAAGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPSLALT*CLRRAA
Trigger: CGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp ATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTGGTCTGTTAGGCAGCCCTACAGTGCAAGGCATCTaGGGAAGCCCATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IWRFPGATPRSPGLLGSPTVQGI*GSPSSR
Trigger: CCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGT...AGGGCTGCCTAACAGACCAGGAGATCTGGGGGTTGCACCAGGGAATCGCCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 90 bp CAGGAGGATGGCCTCCAGCTGGGAGAGCGTACAGATGGACAGAAATaGATGGAAGATCTGATGCCCATGGCCCACGATGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: QEDGLQLGERTDGQK*MEDLMPMAHDVTGT
Trigger: GGTTCCTGTGACATCGTGGGCCATGGGCATCAGATCTTCCATGCATTTCTGTCCATCTGTACGCTCTCCCAGCTGGAGGCCATCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 90 bp ATCTTTCTTGGTCAGTCTGGCCTTGACTTTGTGCCTCAGAAGGGCTaGGGTGGCAGCACTGCAGGCAGCCAGGAAGAAGAAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: IFLGQSGLDFVPQKG*GGSTAGSQEEEGEA
Trigger: TGCCTCTCCTTCTTCTTCCTGGCTGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 90 bp AATAGCGACCCACACATACAATCTATTGGAGGCAGGGTGCGGGGGTaGGTTCCACCTCCCGACTTGCTCCTCACCCACAATGTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: NSDPHIQSIGGRVRG*VPPPDLLLTHNVLG
Trigger: ACCGAGAACATTGTGGGTGAGGAGCAAGTCGGGAGGTGGAACCCACCCCCGCACCCTGCCTCCAATAGATTGTATGTGTGGGTCGCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS TCA 90 bp CACGCCAACATAGTCCACAAAGTAGAAGGTGTAGTGGGAGAGCTCTaGCTTGGACTGCAGCAGGTGGGCCAGAAGGCTGCAGGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: HANIVHKVEGVVGEL*LGLQQVGQKAAGEV
Trigger: TACCTCACCTGCAGCCTTCTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTCTCCCACTACACCTTCTACTTTGTGGACTATGTTGGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAACCATCCTCCAGGATCTaGGGCAGGCGGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEPSSRI*GRRRSC
Trigger: GCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGG...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CCTCAGGGAGGGCTGCATGGCCACAACACATCAATCCCAAGCACCACCTATCCCAAATGGGTCCAGACGTaGACCACCTCGTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: PQGGLHGHNTSIPSTTYPKWVQT*TTSLCF
Trigger: GAAACACAACGAGGTGGTCAACGTCTGGACCCATTT...GGGATAGGTGGTGCTTGGGATTGATGTGTTGTGGCCATGCAGCCCTCCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS TCA 90 bp TCCAGCTGGGAGAGCGTACAGATGGACAGAAATGCATGGAAGATCTaGTGCCCATGGCCCACGATGTCACAGGAACCCGGGAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: SSWESVQMDRNAWKI*CPWPTMSQEPGKYF
Trigger: GAAGTACTTCCCGGGTTCCTGTGACATCGTGGGCCATGGGCATCAGATCTTCCATGCATTTCTGTCCATCTGTACGCTCTCCCAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTCCATCCTCCAGGATCTaGGGCAGGCGGCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIPSSRI*GRRRSC
Trigger: GCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGG...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTACCTGCTGGCACCACTaGACAGATCTTCCTCATGAC +
Preference number: 5 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGTCWHH*TDLPHD
Trigger: GTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGGT...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 90 bp CAGAAGATCCCACTTCTACCCTGTGTCCTCAATCCACAGCCTTCGTaGGTCCCAGCAATAGCGACCCACACATACAATCTATTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QKIPLLPCVLNPQPS*VPAIATHTYNLLEA
Trigger: TGCCTCCAATAGATTGTATGTGTGGGTCGCTATTGCTGGGACCCACGAAGGCTGTGGATTGAGGACACAGGGTAGAAGTGGGATCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS-3UTR CAA 90 bp CAACACATCAATCCCAAGCACCACCTATCCCATAGAAGCTTCTGGGCAGCAATGGTATGCAACTCAGTGTaGGCAGCCAACTGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: QHINPKHHLSHRSFWAAMVCNSV*AANWLP
Trigger: TGGGAGCCAGTTGGCTGCCAACACTGAGTTGCATAC...CATTGCTGCCCAGAAGCTTCTATGGGATAGGTGGTGCTTGGGATTGATGTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS-3UTR CAA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTCCTCAGGAATCTTTCTaGGTCAGTCTGGCCTTGACT +
Preference number: 5 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGPQESF*VSLALT
Trigger: AGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGG...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCCACACGTTGCCCCACTaGCCAGCCTCAGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACHTLPH*PASGIF
Trigger: AAAGATTCCTGAGGCTGGCAAGTGGGGCAACGTGTG...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 90 bp AAAAGCCAGACCTGCTGGCACCACTTGACAGATCTTCCTCATGACTaGATAAGGCCTCCGGTAACGATATTTGGCATAGCAACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KSQTCWHHLTDLPHD*IRPPVTIFGIATAS
Trigger: GCTGGCTGTTGCTATGCCAAATATCGTTACCGGAGGCCTTATCCAGTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGGTCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTCACACGTTGCCCCACTaGCCAGCCTCAGGAATCTTT +
Preference number: 5 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPHTLPH*PASGIF
Trigger: AAAGATTCCTGAGGCTGGCAAGTGGGGCAACGTGTG...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCACAGTGCAAGGCATCTaGGGAAGCCCATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFTVQGI*GSPSSR
Trigger: CCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGT...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTAGGTGGGCGGATCACTaGAGTTCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPRWADH*SSGVQD
Trigger: GTCTTGAACTCCTGAACTCAAGTGATCCGCCCACCT...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACATTGGAGGGGCTATGGTaGAATAAGCCATCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SFTGLVQKSILREGCMATLEGLW*NKPSPL
Trigger: TAAAGGAGATGGCTTATTCAACCATAGCCCCTCCAA...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTAGTCTGGCCTTGACTTaGTGCCTCAGAAGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: FMPVPVLIMSQAINNVQISLALT*CLRRAA
Trigger: CGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACT...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAATTCATCATGTCATCTaGAAGGCTTTTCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: SFTGLVQKSILREGCMATIHHVI*KAFPLW
Trigger: CCAGAGTGGAAAAGCCTTCAAGATGACATGATGAAT...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TCCTTCACTGGATTAGTGCAGAAGTCAATCCTCAGGGAGGGCTGCATGGCCACAGCTTGTATAAGACACTaGGGTAACACAGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: SFTGLVQKSILREGCMATACIRH*GNTEVQ
Trigger: CTGAACTTCTGTGTTACCCAAGTGTCTTATACAAGC...TGTGGCCATGCAGCCCTCCCTGAGGATTGACTTCTGCACTAATCCAGTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp ATAGAAGCTTCTGGGCAGCAATGCTCCAAACAAACCAGGGTGCCTGGTTCACATAATTCCCCCATCCTCTaGTTCAGTTCAACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IEASGQQCSKQTRVPGSHNSPIL*FSSTQF
Trigger: GAACTGGGTTGAACTGAACAAGAGGATGGGGGAATT...ATGTGAACCAGGCACCCTGGTTTGTTTGGAGCATTGCTGCCCAGAAGCTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTAGGTGGGCGGATCACTaGAGTTCAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIRWADH*SSGVQD
Trigger: GTCTTGAACTCCTGAACTCAAGTGATCCGCCCACCT...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTGCAAATGTGTCCTGTTaGCTGTGTCCTGCCATCTCC +
Preference number: 5 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVANVSC*LCPAIS
Trigger: GGAGATGGCAGGACACAGCAAACAGGACACATTTGC...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 90 bp CATACCAGGCCTGGTCAGAGCTGTAGAAGAAATGAGCCAAAGCACTaGCATATTGGTAAACGCTCACGCCAACATAGTCCACAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: HTRPGQSCRRNEPKH*HIGKRSRQHSPQSR
Trigger: TCTACTTTGTGGACTATGTTGGCGTGAGCGTTTACCAATATGGCAGTGCTTTGGCTCATTTCTTCTACAGCTCTGACCAGGCCTGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTCAAAGCACTGCCATATaGGTAAACGCTCACGCCAAC +
Preference number: 5 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVQSTAI*VNAHAN
Trigger: GTTGGCGTGAGCGTTTACCAATATGGCAGTGCTTTG...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AGTTTTGTGGGTCCTTCGTGGGGCAGCATCTATGTAGGAGGCTGGACTTTGGGTAAACTCTTAAATCCTTaGGCTTTCAAACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: SFVGPSWGSIYVGGWTLGKLLNP*AFKHCS
Trigger: GCTGCAGTGTTTGAAAGCCAAAGGATTTAAGAGTTT...ACCCAAAGTCCAGCCTCCTACATAGATGCTGCCCCACGAAGGACCCACAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCCTACTAACAACGTATTaGCACAATTCCCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACLLTTY*HNSPIL
Trigger: GAGGATGGGGGAATTGTGCAAATACGTTGTTAGTAG...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTAGTAAACACACATGCTaGCCTATCCCAGTACTTGAG +
Preference number: 5 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPSKHTC*PIPVLE
Trigger: CTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACT...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTAAATGGGTCCAGACGTaGACCACCTCGTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIKWVQT*TTSLCF
Trigger: GAAACACAACGAGGTGGTCAACGTCTGGACCCATTT...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCATGCCTGTTCCTGTGCTCATCATGTCACAGGCCATTAACAATGTTCAGATTCAAAGCACTGCCATATaGGTAAACGCTCACGCCAAC +
Preference number: 5 (lower is better)
Translates to: FMPVPVLIMSQAINNVQIQSTAI*VNAHAN
Trigger: GTTGGCGTGAGCGTTTACCAATATGGCAGTGCTTTG...AATCTGAACATTGTTAATGGCCTGTGACATGATGAGCACAGGAACAGGCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACACCTGCTGGCACCACTaGACAGATCTTCCTCATGAC +
Preference number: 5 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHTCWHH*TDLPHD
Trigger: GTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGGT...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTAAAACATGCTGGTCAAATATGGCGATTCCCTGGTGCAACCCCCAGATCTCCTTTCCCTTCCTGTGCCTaGTTAAGCTATGATCCAAAA +
Preference number: 5 (lower is better)
Translates to: LKHAGQIWRFPGATPRSPFPSCA*LSYDPK
Trigger: TTTTGGATCATAGCTTAACAAGGCACAGGAAGGGAA...AGGAGATCTGGGGGTTGCACCAGGGAATCGCCATATTTGACCAGCATGTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAATTAACAATGTTCAGATaGGCACTGGTCTGTGCACCC +
Preference number: 5 (lower is better)
Translates to: VLYITMQGRDVSEQHVRELTMFR*ALVCAP
Trigger: GGGTGCACAGACCAGTGCCAATCTGAACATTGTTAA...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACCCTCAGGAATCTTTCTaGGTCAGTCTGGCCTTGACT +
Preference number: 5 (lower is better)
Translates to: LKISAHNTTSYIQELDLHPQESF*VSLALT
Trigger: AGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGG...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTTTCCCTTCCTGTGCCTaGTTAAGCTATGATCCAAAA +
Preference number: 5 (lower is better)
Translates to: QAINNVQIGTGLCTHLIIFPSCA*LSYDPK
Trigger: TTTTGGATCATAGCTTAACAAGGCACAGGAAGGGAA...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp ACAGCACGTCAGAGAAAACTGCCAGGTGTAGACAGTTATCCTGAGAAAAGGGTTTGCCTATCCCAGTACTaGAGTATTTTATGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: TARQRKLPGVDSYPEKRVCLSQY*SILWVL
Trigger: CAGAACCCATAAAATACTCAAGTACTGGGATAGGCA...AACCCTTTTCTCAGGATAACTGTCTACACCTGGCAGTTTTCTCTGACGTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAAAGTAAACACACATGCTaGCCTATCCCAGTACTTGAG +
Preference number: 5 (lower is better)
Translates to: VLYITMQGRDVSEQHVRESKHTC*PIPVLE
Trigger: CTCAAGTACTGGGATAGGCAAGCATGTGTGTTTACT...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAATTGGAGGGGCTATGGTaGAATAAGCCATCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VLYITMQGRDVSEQHVRELEGLW*NKPSPL
Trigger: TAAAGGAGATGGCTTATTCAACCATAGCCCCTCCAA...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAATTTCCAGTAGATATGTaGGAGGGGCTATGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEFPVDM*EGLWLN
Trigger: ATTCAACCATAGCCCCTCCAACATATCTACTGGAAA...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCGCAAATGTGTCCTGTTaGCTGTGTCCTGCCATCTCC +
Preference number: 5 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPANVSC*LCPAIS
Trigger: GGAGATGGCAGGACACAGCAAACAGGACACATTTGC...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTCTCACCCAAAGGAGCCTTCAGGGACCAATCCACAGTAAACACACATGCTTGCTTGAGAATATTGTTGTaGAGTGAAGTACTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: FSPKGAFRDQSTVNTHACLRILL*SEVLSA
Trigger: AGCGGAAAGTACTTCACTCAACAACAATATTCTCAA...GCAAGCATGTGTGTTTACTGTGGATTGGTCCCTGAAGGCTCCTTTGGGTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCATTCATCATGTCATCTaGAAGGCTTTTCCACTCTGG +
Preference number: 5 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFIHHVI*KAFPLW
Trigger: CCAGAGTGGAAAAGCCTTCAAGATGACATGATGAAT...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACTTAACAATGTTCAGATaGGCACTGGTCTGTGCACCC +
Preference number: 5 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHLTMFR*ALVCAP
Trigger: GGGTGCACAGACCAGTGCCAATCTGAACATTGTTAA...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GCTGGACTTTGGGTTCCTCTTGAAATAATGAGGTCCCTAGAGGGATCCTTAGAAAAAATTTCCAACCACTaGAGGGGCCAATACTTGTAT +
Preference number: 5 (lower is better)
Translates to: AGLWVPLEIMRSLEGSLEKISNH*RGQYLY
Trigger: ATACAAGTATTGGCCCCTCAAGTGGTTGGAAATTTT...TTCTAAGGATCCCTCTAGGGACCTCATTATTTCAAGAGGAACCCAAAGTCCAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp GTCCTTTATATTACCATGCAAGGTAGGGATGTGAGTGAACAGCACGTCAGAGAATTTCCAGTAGATATGTaGGAGGGGCTATGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VLYITMQGRDVSEQHVREFPVDM*EGLWLN
Trigger: ATTCAACCATAGCCCCTCCAACATATCTACTGGAAA...TTCTCTGACGTGCTGTTCACTCACATCCCTACCTTGCATGGTAATATAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAGCTTTTAATTCCCCCATCCTCTaGTTCAGTTCAACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: RTSHLLTFQSNFIIHSAFNSPIL*FSSTQF
Trigger: GAACTGGGTTGAACTGAACAAGAGGATGGGGGAATT...AAAAGCTGAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATCTACTAACAACGTATTaGCACAATTCCCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNLLTTY*HNSPIL
Trigger: GAGGATGGGGGAATTGTGCAAATACGTTGTTAGTAG...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGGTGAGGACCAGCCACCTACTTACTTTCCAGTCCAATTTTATTATCCATTCAAAATTTCCAACCACTaGAGGGGCCAATACTTGTAT +
Preference number: 5 (lower is better)
Translates to: QGEDQPPTYFPVQFYYPFKISNH*RGQYLY
Trigger: ATACAAGTATTGGCCCCTCAAGTGGTTGGAAATTTT...GAATGGATAATAAAATTGGACTGGAAAGTAAGTAGGTGGCTGGTCCTCACCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTCTCTTGAGAATATTGTaGTTGAGTGAAGTACTTTCC +
Preference number: 5 (lower is better)
Translates to: QAINNVQIGTGLCTHLIILLRIL*LSEVLS
Trigger: GGAAAGTACTTCACTCAACAACAATATTCTCAAGAG...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CAGGCCATTAACAATGTTCAGATTGGCACTGGTCTGTGCACCCATCTGATCATTTCCAGTAGAAGACTCTaGAGAATATTGTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: QAINNVQIGTGLCTHLIISSRRL*RILLLS
Trigger: ACTCAACAACAATATTCTCAAGAGTCTTCTACTGGA...AATGATCAGATGGGTGCACAGACCAGTGCCAATCTGAACATTGTTAATGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AGCAAGCAAAACACAAGACCAATAGAATTAGTAGACAGAAGCCTTGGGGACAATGCTTGTATAAGACACTaGGGTAACACAGAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: SKQNTRPIELVDRSLGDNACIRH*GNTEVQ
Trigger: CTGAACTTCTGTGTTACCCAAGTGTCTTATACAAGC...ATTGTCCCCAAGGCTTCTGTCTACTAATTCTATTGGTCTTGTGTTTTGCTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACATCTGGAGGATCCATTaGAAACTACAGTGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: LKISAHNTTSYIQELDLHIWRIH*KLQCSN
Trigger: GTTACTGCACTGTAGTTTCAAATGGATCCTCCAGAT...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp AAGTCAGCTTCTATTGTATCAAGTTTTCTCCAAATTATGAGGGGCTTCCTCCACAAACTCTTAAATCCTTaGGCTTTCAAACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: KSASIVSSFLQIMRGFLHKLLNP*AFKHCS
Trigger: GCTGCAGTGTTTGAAAGCCAAAGGATTTAAGAGTTT...GTGGAGGAAGCCCCTCATAATTTGGAGAAAACTTGATACAATAGAAGCTGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACATCTGGAGGATCCATTaGAAACTACAGTGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: FELKISAHNTTSYIQELDIWRIH*KLQCSN
Trigger: GTTACTGCACTGTAGTTTCAAATGGATCCTCCAGAT...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp CTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTACACCTCTTGAGAATATTGTaGTTGAGTGAAGTACTTTCC +
Preference number: 5 (lower is better)
Translates to: LKISAHNTTSYIQELDLHLLRIL*LSEVLS
Trigger: GGAAAGTACTTCACTCAACAACAATATTCTCAAGAG...GTGTAAGTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTTGAACTAAAGATCTCTGCCCACAATACCACCAGTTATATTCAAGAGCTTGACTTGAGAATATTGTTGTaGAGTGAAGTACTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: FELKISAHNTTSYIQELDLRILL*SEVLSA
Trigger: AGCGGAAAGTACTTCACTCAACAACAATATTCTCAA...GTCAAGCTCTTGAATATAACTGGTGGTATTGTGGGCAGAGATCTTTAGTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS-3UTR CAA 90 bp TTGAGAATATTGTTGTTGAGTGAAGTACTTTCCGCTGAAATGGGAAATGAACCCTCCAGTAGAAGACTCTaGAGAATATTGTTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LRILLLSEVLSAEMGNEPSSRRL*RILLLS
Trigger: ACTCAACAACAATATTCTCAAGAGTCTTCTACTGGA...GGGTTCATTTCCCATTTCAGCGGAAAGTACTTCACTCAACAACAATATTCTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 72 bp AGCCCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTaGTGCCCGCTGACCGACAGGGTGCTCAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SPSSRILGRRRS*CPLTDRVLRRS
Trigger: GGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 72 bp TGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACCGGCAGG +
Preference number: 6 (lower is better)
Translates to: WRSSWQRPACTP*RALRTGYATGR
Trigger: CCTGCCGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442253.3
CDS CCA 72 bp ACAGGGTGCTCAGGCGCTCCAAGATGGCGGTCGTCATaGCAGCGGCCCGCATGCACTCCGTGCCGCGCCCTC +
Preference number: 6 (lower is better)
Translates to: TGCSGAPRWRSS*QRPACTPCRAL
Trigger: GAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGCGCCTGAGCACCCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 72 bp CCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTGCTaGCCGCTGACCGACAGGGTGCTCAGGCGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: PSSRILGRRRSC*PLTDRVLRRSK
Trigger: CTTGGAGCGCCTGAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 72 bp GCTCCAAGATGGCGGTCGTCATGGCAGCGGCCCGCATaGACTCCGTGCCGCGCCCTCAGGACAGGGTATGCA +
Preference number: 6 (lower is better)
Translates to: APRWRSSWQRPA*TPCRALRTGYA
Trigger: TGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCATCTTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS GCA 72 bp TGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: WRSSWQRPACTP*RALRTGYATCR
Trigger: TCTGCAGGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS GCA 72 bp TGGCGGTCGTCATGGCAGCGGCCCGCATGCACTCCGTaGCGCGCCCTCAGGACAGGGTATGCAACTCAGTGT +
Preference number: 6 (lower is better)
Translates to: WRSSWQRPACTP*RALRTGYATQC
Trigger: ACACTGAGTTGCATACCCTGTCCTGAGGGCGCGGCACGGAGTGCATGCGGGCCGCTGCCATGACGACCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS CAA 72 bp GTGCAAGGCATCTTGGGAAGCCCATCCTCCAGGATCTaGGGCAGGCGGCGCAGCTGCTGCCCGCTGACCGAC +
Preference number: 6 (lower is better)
Translates to: VQGILGSPSSRI*GRRRSCCPLTD
Trigger: GTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS CAA 90 bp TCTGGGACAGTGCAAGGCATCTTGGGAAGCCCATCCTCCAGGATCTaGGGCAGGCGGCGCAGCTGCTGCCCGCTGACCGACAGGGTGCTC +
Preference number: 6 (lower is better)
Translates to: SGTVQGILGSPSSRI*GRRRSCCPLTDRVL
Trigger: GAGCACCCTGTCGGTCAGCGGGCAGCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS CAA 90 bp CGGAAGAGCTGGGGCACATCCGTTTCTGGGACAGTGCAAGGCATCTaGGGAAGCCCATCCTCCAGGATCTTGGGCAGGCGGCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: RKSWGTSVSGTVQGI*GSPSSRILGRRRSC
Trigger: GCAGCTGCGCCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCCCAGCTCTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS CAA 90 bp CAGCCTTCGTGGGTCCCAGCAATAGCGACCCACACATACAATCTATaGGAGGCAGGGTGCGGGGGTGGGTTCCACCTCCCGACTTGCTCC +
Preference number: 6 (lower is better)
Translates to: QPSWVPAIATHTYNL*EAGCGGGFHLPTCS
Trigger: GGAGCAAGTCGGGAGGTGGAACCCACCCCCGCACCCTGCCTCCAATAGATTGTATGTGTGGGTCGCTATTGCTGGGACCCACGAAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS CCA 72 bp GGAAGATCTCCTGCCGCCCCTGGTAGTCCAGGAGGATaGCCTCCAGCTGGGAGAGCGTACAGATGGACAGAA +
Preference number: 6 (lower is better)
Translates to: GRSPAAPGSPGG*PPAGRAYRWTE
Trigger: TTCTGTCCATCTGTACGCTCTCCCAGCTGGAGGCCATCCTCCTGGACTACCAGGGGCGGCAGGAGATCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 72 bp TGGGGCACATCCGTTTCTGGGACAGTGCAAGGCATCTaGGGAAGCCCATCCTCCAGGATCTTGGGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: WGTSVSGTVQGI*GSPSSRILGRR
Trigger: CCGCCTGCCCAAGATCCTGGAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS CAA 72 bp TGGGTCCCAGCAATAGCGACCCACACATACAATCTATaGGAGGCAGGGTGCGGGGGTGGGTTCCACCTCCCG +
Preference number: 6 (lower is better)
Translates to: WVPAIATHTYNL*EAGCGGGFHLP
Trigger: CGGGAGGTGGAACCCACCCCCGCACCCTGCCTCCAATAGATTGTATGTGTGGGTCGCTATTGCTGGGACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS CCA 72 bp GTAAGGCTCCCGGAAGAGCTGGGGCACATCCGTTTCTaGGACAGTGCAAGGCATCTTGGGAAGCCCATCCTC +
Preference number: 6 (lower is better)
Translates to: VRLPEELGHIRF*DSARHLGKPIL
Trigger: GAGGATGGGCTTCCCAAGATGCCTTGCACTGTCCCAGAAACGGATGTGCCCCAGCTCTTCCGGGAGCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360726.3
ENST00000442253.3
ENST00000512121.1
CDS CAA 90 bp ACTTGCCAGCCTCAGGAATCTTTCTTGGTCAGTCTGGCCTTGACTTaGTGCCTCAGAAGGGCTGCGGTGGCAGCACTGCAGGCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: TCQPQESFLVSLALT*CLRRAAVAALQAAR
Trigger: CCTGGCTGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGGCTGGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 90 bp TGCCCCACTTGCCAGCCTCAGGAATCTTTCTTGGTCAGTCTGGCCTaGACTTTGTGCCTCAGAAGGGCTGCGGTGGCAGCACTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: CPTCQPQESFLVSLA*TLCLRRAAVAALQA
Trigger: TGCCTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGGCTGGCAAGTGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 90 bp GCTTCCTCCACACGTTGCCCCACTTGCCAGCCTCAGGAATCTTTCTaGGTCAGTCTGGCCTTGACTTTGTGCCTCAGAAGGGCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: ASSTRCPTCQPQESF*VSLALTLCLRRAAV
Trigger: CACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGGCTGGCAAGTGGGGCAACGTGTGGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS GCA 72 bp GAGGCAGGGTGCGGGGGTGGGTTCCACCTCCCGACTTaGTCCTCACCCACAATGTTCTCGGTATTTTACCAT +
Preference number: 6 (lower is better)
Translates to: EAGCGGGFHLPT*SSPTMFSVFYH
Trigger: ATGGTAAAATACCGAGAACATTGTGGGTGAGGAGCAAGTCGGGAGGTGGAACCCACCCCCGCACCCTGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS GCA 72 bp GGCCTCCAGCTGGGAGAGCGTACAGATGGACAGAAATaGATGGAAGATCTGATGCCCATGGCCCACGATGTC +
Preference number: 6 (lower is better)
Translates to: GLQLGERTDGQK*MEDLMPMAHDV
Trigger: GACATCGTGGGCCATGGGCATCAGATCTTCCATGCATTTCTGTCCATCTGTACGCTCTCCCAGCTGGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 72 bp CCTCAGGAATCTTTCTTGGTCAGTCTGGCCTTGACTTaGTGCCTCAGAAGGGCTGCGGTGGCAGCACTGCAG +
Preference number: 6 (lower is better)
Translates to: PQESFLVSLALT*CLRRAAVAALQ
Trigger: CTGCAGTGCTGCCACCGCAGCCCTTCTGAGGCACAAAGTCAAGGCCAGACTGACCAAGAAAGATTCCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS TCA 72 bp ATAGTCCACAAAGTAGAAGGTGTAGTGGGAGAGCTCTaGCTTGGACTGCAGCAGGTGGGCCAGAAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: IVHKVEGVVGEL*LGLQQVGQKAA
Trigger: TGCAGCCTTCTGGCCCACCTGCTGCAGTCCAAGTCAGAGCTCTCCCACTACACCTTCTACTTTGTGGACTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CCA 72 bp CAGGACAGGGTATGCAACTCAGTGTTGGCAGCCAACTaGCTCCCAGGTGAGGAGAACATTTCTGGCAGTAAA +
Preference number: 6 (lower is better)
Translates to: QDRVCNSVLAAN*LPGEENISGSK
Trigger: TTTACTGCCAGAAATGTTCTCCTCACCTGGGAGCCAGTTGGCTGCCAACACTGAGTTGCATACCCTGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360726.3
CDS CCA 72 bp CCACTTCTACCCTGTGTCCTCAATCCACAGCCTTCGTaGGTCCCAGCAATAGCGACCCACACATACAATCTA +
Preference number: 6 (lower is better)
Translates to: PLLPCVLNPQPS*VPAIATHTYNL
Trigger: TAGATTGTATGTGTGGGTCGCTATTGCTGGGACCCACGAAGGCTGTGGATTGAGGACACAGGGTAGAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512121.1
CDS CCA 72 bp ACCTGCTGGCACCACTTGACAGATCTTCCTCATGACTaGATAAGGCCTCCGGTAACGATATTTGGCATAGCA +
Preference number: 6 (lower is better)
Translates to: TCWHHLTDLPHD*IRPPVTIFGIA
Trigger: TGCTATGCCAAATATCGTTACCGGAGGCCTTATCCAGTCATGAGGAAGATCTGTCAAGTGGTGCCAGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 90 bp GGCCTGGTCAGAGCTGTAGAAGAAATGAGCCAAAGCACTGCCATATaGGTAAACGCTCACGCCAACATAGTCCACAAAGTAGAAGGTGTA +
Preference number: 6 (lower is better)
Translates to: GLVRAVEEMSQSTAI*VNAHANIVHKVEGV
Trigger: TACACCTTCTACTTTGTGGACTATGTTGGCGTGAGCGTTTACCAATATGGCAGTGCTTTGGCTCATTTCTTCTACAGCTCTGACCAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3
CDS CAA 72 bp AGAGCTGTAGAAGAAATGAGCCAAAGCACTGCCATATaGGTAAACGCTCACGCCAACATAGTCCACAAAGTA +
Preference number: 6 (lower is better)
Translates to: RAVEEMSQSTAI*VNAHANIVHKV
Trigger: TACTTTGTGGACTATGTTGGCGTGAGCGTTTACCAATATGGCAGTGCTTTGGCTCATTTCTTCTACAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360726.3
ENST00000442253.3