Pregenerated sensors for PAQR5-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261634Ensembl transcript IDs: ENST00000563004.2, ENST00000565312.3, ENST00000570122.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAGCGCCTTCCAGTCTAGGAGCCTGTGACCTGGGACAGGATCCCTaGGGAAAGGGTGAGGGCTGGCAAAGGGCCCGCCACCCTGAGCAC | + |
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Preference number: 5 (lower is better) Translates to: PAPSSLGACDLGQDP*GKGEGWQRARHPEH Trigger: GTGCTCAGGGTGGCGGGCCCTTTGCCAGCCCTCACCCTTTCCCCAGGGATCCTGTCCCAGGTCACAGGCTCCTAGACTGGAAGGCGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | CCAGGTGGGGCACCAGGCATCTCTGCTCACCTTGGCTGCTGGTGGTaGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTTGGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PGGAPGISAHLGCWW*GACLCCACCSFGRV Trigger: CACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | AGCAGGCAGGAATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTTaGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SRQESRWGTRHLCSP*LLVVGCLPVLCMLQ Trigger: CTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCTGCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | CTCTGCTCACCTTGGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTaGATGCTGCAGCTTTGGCAGGGTGGCCAATCAGTCCAGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LCSPWLLVVGCLPVL*MLQLWQGGQSVQCQ Trigger: CTGGCACTGGACTGATTGGCCACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GCACCAGGCATCTCTGCTCACCTTGGCTGCTGGTGGTGGGGTGCCTaGCTGTGCTGTGCATGCTGCAGCTTTGGCAGGGTGGCCAATCAG | + |
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Preference number: 5 (lower is better) Translates to: APGISAHLGCWWWGA*LCCACCSFGRVANQ Trigger: CTGATTGGCCACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GGCAGGAATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTTGGCTaGTGGTGGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GRNPGGAPGISAHLG*WWWGACLCCACCSF Trigger: AAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GATACCTACAGCAGGCAGGAATCCAGGTGGGGCACCAGGCATCTCTaGTCACCTTGGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: DTYSRQESRWGTRHL*SPWLLVVGCLPVLC Trigger: GCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCTGCCTGCTGTAGGTATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | GGCTGGCAAAGGGCCCGCCACCCTGAGCACTCCAAGAGACAGGGGTaGAACTCACTTCAAGGATTCAGGGCGGCGAGGATCCTCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GWQRARHPEHSKRQG*NSLQGFRAARILSH Trigger: GTGGGAGAGGATCCTCGCCGCCCTGAATCCTTGAAGTGAGTTCCACCCCTGTCTCTTGGAGTGCTCAGGGTGGCGGGCCCTTTGCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | AATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTTGGCTGCTGGTaGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NPGGAPGISAHLGCW*WGACLCCACCSFGR Trigger: CCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | AGGAATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTTGGCTGCTaGTGGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: RNPGGAPGISAHLGC*WWGACLCCACCSFG Trigger: GCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GGCATCTCTGCTCACCTTGGCTGCTGGTGGTGGGGTGCCTGCCTGTaGTGTGCATGCTGCAGCTTTGGCAGGGTGGCCAATCAGTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GISAHLGCWWWGACL*CACCSFGRVANQSS Trigger: ACTGGACTGATTGGCCACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | GTCCACAGGTGTGGATGTTCCAACCTTTCTCTGGCAGGGTCGGGGTaGGGGCACCAGGTAGCTGCAACCTGTTCCTTCAGCACCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: VHRCGCSNLSLAGSG*GHQVAATCSFSTWE Trigger: CTCCCAGGTGCTGAAGGAACAGGTTGCAGCTACCTGGTGCCCCCACCCCGACCCTGCCAGAGAAAGGTTGGAACATCCACACCTGTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | CGCACGCCTGTATCTTCCCAACTGGTGTCAGCTCGAAACCCTCTGTaGTCTGCAGTGCTCAGCCTGGCTTTCCAGGTCTGGGCAGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RTPVSSQLVSARNPL*SAVLSLAFQVWAAP Trigger: GGGAGCTGCCCAGACCTGGAAAGCCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTTGGGAAGATACAGGCGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | GGGTCATTTGGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCAACTaGTGTCAGCTCGAAACCCTCTGTGGTCTGCAGTGCTCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSFGRVPLARLYLPN*CQLETLCGLQCSAW Trigger: CCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GTAGCTGTGAGAAAAGCCGCTTCGTGTCGGGGGTCGACTGTTCCCTaGTGGCCAGCTGTGGGTGTGGAGCCAGTGACTTTGCCTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: VAVRKAASCRGSTVP*WPAVGVEPVTLPLH Trigger: GTGAAGAGGCAAAGTCACTGGCTCCACACCCACAGCTGGCCAGCAGGGAACAGTCGACCCCCGACACGAAGCGGCTTTTCTCACAGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CCA 90 bp | CCCCGTCTCCTTGCTGCCTTGCTGTCATGTCACCTGCTGTCTCACTaGGTCATTTGGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: PRLLAALLSCHLLSH*VIWACAPRTPVSSQ Trigger: TTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAAGGCAGCAAGGAGACGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | GCTGTGAGAAAAGCCGCTTCGTGTCGGGGGTCGACTGTTCCCTGCTaGCCAGCTGTGGGTGTGGAGCCAGTGACTTTGCCTCTTCACATC | + |
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Preference number: 5 (lower is better) Translates to: AVRKAASCRGSTVPC*PAVGVEPVTLPLHI Trigger: GATGTGAAGAGGCAAAGTCACTGGCTCCACACCCACAGCTGGCCAGCAGGGAACAGTCGACCCCCGACACGAAGCGGCTTTTCTCACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 90 bp | GCCTGTATCTTCCCAACTGGTGTCAGCTCGAAACCCTCTGTGGTCTaGAGTGCTCAGCCTGGCTTTCCAGGTCTGGGCAGCTCCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ACIFPTGVSSKPSVV*SAQPGFPGLGSSLL Trigger: AAGGAGGGAGCTGCCCAGACCTGGAAAGCCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTTGGGAAGATACAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | CAGGGTGGCCAATCAGTCCAGTGCCAGCCTTTGCCTCCCAGAGAATaGTTCACACCCTATTCTTCCCCCAAACCCATCACTGGCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: QGGQSVQCQPLPPRE*FTPYSSPKPITGPD Trigger: GTCTGGGCCAGTGATGGGTTTGGGGGAAGAATAGGGTGTGAAGCATTCTCTGGGAGGCAAAGGCTGGCACTGGACTGATTGGCCACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | TATCTTCCCAACTGGTGTCAGCTCGAAACCCTCTGTGGTCTGCAGTaGTCAGCCTGGCTTTCCAGGTCTGGGCAGCTCCCTCCTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: YLPNWCQLETLCGLQ*SAWLSRSGQLPPSR Trigger: TCTGGAAGGAGGGAGCTGCCCAGACCTGGAAAGCCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTTGGGAAGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | CTTGCTGCCTTGCTGTCATGTCACCTGCTGTCTCACTGGGTCATTTaGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCAACTGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LAALLSCHLLSHWVI*ACAPRTPVSSQLVS Trigger: TGACACCAGTTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAAGGCAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 90 bp | TTCACTGCAAATGGGGCAACTTGGGCCCACAAAGGGCCAGAGACTTaGCCCGAGTCACAGAGTAGACTAGAGCCCAGGTCTCTGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: FTANGATWAHKGPET*PESQSRLEPRSLDS Trigger: GGAGTCCAGAGACCTGGGCTCTAGTCTACTCTGTGACTCGGGTCAAGTCTCTGGCCCTTTGTGGGCCCAAGTTGCCCCATTTGCAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 90 bp | TGGCTTTCCAGGTCTGGGCAGCTCCCTCCTTCCAGATCCTGCCTGTaGTTCCAGCTCCTTTCCCTTGCTGTACAAAGTTCCCACCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: WLSRSGQLPPSRSCL*FQLLSLAVQSSHLC Trigger: GCAGAGGTGGGAACTTTGTACAGCAAGGGAAAGGAGCTGGAATCACAGGCAGGATCTGGAAGGAGGGAGCTGCCCAGACCTGGAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | CTTGCTGTCATGTCACCTGCTGTCTCACTGGGTCATTTGGGCGTGTaGCCCTCGCACGCCTGTATCTTCCCAACTGGTGTCAGCTCGAAA | + |
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Preference number: 5 (lower is better) Translates to: LAVMSPAVSLGHLGV*PSHACIFPTGVSSK Trigger: TTTCGAGCTGACACCAGTTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | AAGTTCCCACCTCTGCACTTTGCCTCACTCTTTCTTCCTGCCCACTaGTACGTATCCCAGTCCTTCCCACACTTCAGGTCTCCCTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: KFPPLHFASLFLPAH*YVSQSFPHFRSPSA Trigger: AGCCGAGGGAGACCTGAAGTGTGGGAAGGACTGGGATACGTACCAGTGGGCAGGAAGAAAGAGTGAGGCAAAGTGCAGAGGTGGGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | CACACCATCTCTCTAGCACTTAGTACACGGCCTGTACAGAGCAGATaGTCGGCAAGGATTTCAAGGATTCAGGGCGGCGAGGATCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HTISLALSTRPVQSR*SARISRIQGGEDPL Trigger: GAGAGGATCCTCGCCGCCCTGAATCCTTGAAATCCTTGCCGAGCATCTGCTCTGTACAGGCCGTGTACTAAGTGCTAGAGAGATGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CCA 90 bp | TCAAGGACGTCCAGCTGTGGATGGCAGAAGGGCCACTGTCTGAAGTaGGAAGTCTGGACATTCCCAAAGGAGTCTTTGAAAGACTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SRTSSCGWQKGHCLK*EVWTFPKESLKDWV Trigger: GACCCAGTCTTTCAAAGACTCCTTTGGGAATGTCCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCCACAGCTGGACGTCCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CCA 90 bp | TATGGAGTGAGGACTAATGGGGAATCAAGGACGTCCAGCTGTGGATaGCAGAAGGGCCACTGTCTGAAGTGGGAAGTCTGGACATTCCCA | + |
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Preference number: 5 (lower is better) Translates to: YGVRTNGESRTSSCG*QKGHCLKWEVWTFP Trigger: TGGGAATGTCCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCCACAGCTGGACGTCCTTGATTCCCCATTAGTCCTCACTCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 90 bp | GGTCTGAGAGGACAAGCGCATGTCGCACGCACACACACACGCACATaGATACACACCCTTACAAGATGCACAGCCACCAAAAAGCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: GLRGQAHVARTHTRT*IHTLTRCTATKKPN Trigger: ATTAGGCTTTTTGGTGGCTGTGCATCTTGTAAGGGTGTGTATGCATGTGCGTGTGTGTGTGCGTGCGACATGCGCTTGTCCTCTCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | TCCAGCTCCTTTCCCTTGCTGTACAAAGTTCCCACCTCTGCACTTTaGCTCACTCTTTCTTCCTGCCCACTGGTACGTATCCCAGTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SSSFPLLYKVPTSAL*LTLSSCPLVRIPVL Trigger: AAGGACTGGGATACGTACCAGTGGGCAGGAAGAAAGAGTGAGGCAAAGTGCAGAGGTGGGAACTTTGTACAGCAAGGGAAAGGAGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | TCTCTACTCCTCCCGGGTGAAGCTCCCACCACAGACCAGCACTCCTaGGTTCTTCATGAAAATCTCATGGAGGATCCACTGGAGACATTT | + |
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Preference number: 5 (lower is better) Translates to: SLLLPGEAPTTDQHS*VLHENLMEDPLETF Trigger: AAATGTCTCCAGTGGATCCTCCATGAGATTTTCATGAAGAACCCAGGAGTGCTGGTCTGTGGTGGGAGCTTCACCCGGGAGGAGTAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 90 bp | GCCCAAGACCACGGTTCAGGATCCGTAAAAATGGCCGGAGATAATTaGCTGCAACCTATTCACTGCAAATGGGGCAACTTGGGCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: AQDHGSGSVKMAGDN*LQPIHCKWGNLGPQ Trigger: TTGTGGGCCCAAGTTGCCCCATTTGCAGTGAATAGGTTGCAGTCAATTATCTCCGGCCATTTTTACGGATCCTGAACCGTGGTCTTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 90 bp | TCGGCTGCACAGGAGGCTCAAATCCAGCATAGATTCCTGAAGTCCTaGGTCCAAGTTCTAGCTCTGCTACTGACTTCTTGTGACTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SAAQEAQIQHRFLKS*VQVLALLLTSCDCV Trigger: CACACAGTCACAAGAAGTCAGTAGCAGAGCTAGAACTTGGACCCAGGACTTCAGGAATCTATGCTGGATTTGAGCCTCCTGTGCAGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 90 bp | GAGAGGCAGAGCAGAAAGGCAATGAGTTTAGCAGCTCTGTTAGGTTaGATGCACACTGGAGGTCATGATGTCCTGCTTGGTCAGAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: ERQSRKAMSLAALLG*MHTGGHDVLLGQKH Trigger: GTGCTTCTGACCAAGCAGGACATCATGACCTCCAGTGTGCATTCAACCTAACAGAGCTGCTAAACTCATTGCCTTTCTGCTCTGCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 90 bp | GATTTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCATTTCGGATGCCACTTTGTTTGCCAATGGGATTTCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: DLGCVCVCVCVCVCV*HFGCHFVCQWDFCP Trigger: GGGGCAGAAATCCCATTGGCAAACAAAGTGGCATCCGAAATGTCACACACACACACACACACACACACACACACACACACACCCCAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 90 bp | TTAGGTTGGGAGCCTCTTTATCTTCCCTCTTTAGTTTCTTCAAGGTaGACACACAGATACCTACAGCAGGCAGGAATCCAGGTGGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LGWEPLYLPSLVSSR*THRYLQQAGIQVGH Trigger: GTGCCCCACCTGGATTCCTGCCTGCTGTAGGTATCTGTGTGTGCACCTTGAAGAAACTAAAGAGGGAAGATAAAGAGGCTCCCAACCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | GTCCAGTCATTCTTGTCAAACTCTGGTCTGTGGAATATACATGCCTaGCTCTGTGTAGGCCCCAGTCTCTTTCCCTTTAAGAACTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VQSFLSNSGLWNIHA*LCVGPSLFPFKNLG Trigger: ACCCAAGTTCTTAAAGGGAAAGAGACTGGGGCCTACACAGAGGCAGGCATGTATATTCCACAGACCAGAGTTTGACAAGAATGACTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 90 bp | GGTGATTTTGGCCAAGATATGCAGATCGATTCATCAGTAATCCACTaGCCACCTCCATTTAGGTTGGGAGCCTCTTTATCTTCCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GDFGQDMQIDSSVIH*PPPFRLGASLSSLF Trigger: AAAGAGGGAAGATAAAGAGGCTCCCAACCTAAATGGAGGTGGTCAGTGGATTACTGATGAATCGATCTGCATATCTTGGCCAAAATCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | AACCATGAGAAAATTGTGACTATATTTATGAGACAGAGAGGGTGTTaGAGGAGAGAGGAGAGGCAGAGCAGAAAGGCAATGAGTTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: NHEKIVTIFMRQRGC*RREERQSRKAMSLA Trigger: TGCTAAACTCATTGCCTTTCTGCTCTGCCTCTCCTCTCTCCTGCAACACCCTCTCTGTCTCATAAATATAGTCACAATTTTCTCATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 90 bp | TCAATCATTCAGTTAGACTTTAAACTCCCTAAGAGCAGAGGAGGGTaGTTTTGGCCAAGATATGCAGATCGATTCATCAGTAATCCACTG | + |
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Preference number: 5 (lower is better) Translates to: SIIQLDFKLPKSRGG*FWPRYADRFISNPL Trigger: CAGTGGATTACTGATGAATCGATCTGCATATCTTGGCCAAAATCACCCTCCTCTGCTCTTAGGGAGTTTAAAGTCTAACTGAATGATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 90 bp | ATAGATCGATTTTTGTCAATATCAACTTTCACCAATGATAGCTGCTaGCGTGGCAAGTTTCCTTTTGTGGACTTTATTTCTATCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: IDRFLSISTFTNDSC*RGKFPFVDFISITS Trigger: GGAGGTGATAGAAATAAAGTCCACAAAAGGAAACTTGCCACGGCAGCAGCTATCATTGGTGAAAGTTGATATTGACAAAAATCGATCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS GCA 90 bp | TTCATAGATCGATTTTTGTCAATATCAACTTTCACCAATGATAGCTaGTGCCGTGGCAAGTTTCCTTTTGTGGACTTTATTTCTATCACC | + |
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Preference number: 5 (lower is better) Translates to: FIDRFLSISTFTNDS*CRGKFPFVDFISIT Trigger: GGTGATAGAAATAAAGTCCACAAAAGGAAACTTGCCACGGCAGCAGCTATCATTGGTGAAAGTTGATATTGACAAAAATCGATCTATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CCA 72 bp | CCTGCCGGCCTTCGGCTCCTGGGGTGGAGGTGGGCGTaGGGTACATGGGCCCTAGGAGAATGGGGTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PAGLRLLGWRWA*GTWALGEWGVR Trigger: TCTCACACCCCATTCTCCTAGGGCCCATGTACCCCACGCCCACCTCCACCCCAGGAGCCGAAGGCCGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563004.2 ENST00000565312.3 |
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| CDS GCA 72 bp | AGCAGGCAGGAATCCAGGTGGGGCACCAGGCATCTCTaGTCACCTTGGCTGCTGGTGGTGGGGTGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRQESRWGTRHL*SPWLLVVGCLP Trigger: AGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCTGCCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | TCCAGTCTAGGAGCCTGTGACCTGGGACAGGATCCCTaGGGAAAGGGTGAGGGCTGGCAAAGGGCCCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSLGACDLGQDP*GKGEGWQRARH Trigger: GTGGCGGGCCCTTTGCCAGCCCTCACCCTTTCCCCAGGGATCCTGTCCCAGGTCACAGGCTCCTAGACTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | GAATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTTaGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: ESRWGTRHLCSP*LLVVGCLPVLC Trigger: GCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 90 bp | GCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTaGGCAGGGTGGCCAATCAGTCCAGTGCCAGCCTTTGCCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AAGGGVPACAVHAAA*AGWPISPVPAFASQ Trigger: CTGGGAGGCAAAGGCTGGCACTGGACTGATTGGCCACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 90 bp | CAGCAGGCAGGAATCCAGGTGGGGCACCAGGCATCTCTGCTCACCTaGGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGCATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QQAGIQVGHQASLLT*AAGGGVPACAVHAA Trigger: TGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGCCCCACCTGGATTCCTGCCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 72 bp | GGCTGCTGGTGGTGGGGTGCCTGCCTGTGCTGTGCATaGTGCAGCTTTGGCAGGGTGGCCAATCAGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GCWWWGACLCCA*CSFGRVANQSS Trigger: ACTGGACTGATTGGCCACCCTGCCAAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | AGGGCCCGCCACCCTGAGCACTCCAAGAGACAGGGGTaGAACTCACTTCAAGGATTCAGGGCGGCGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: RARHPEHSKRQG*NSLQGFRAARI Trigger: GATCCTCGCCGCCCTGAATCCTTGAAGTGAGTTCCACCCCTGTCTCTTGGAGTGCTCAGGGTGGCGGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | GCACCAGGCATCTCTGCTCACCTTGGCTGCTGGTGGTaGGGTGCCTGCCTGTGCTGTGCATGCTGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: APGISAHLGCWW*GACLCCACCSF Trigger: AAAGCTGCAGCATGCACAGCACAGGCAGGCACCCCACCACCAGCAGCCAAGGTGAGCAGAGATGCCTGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | AAAGCCGCTTCGTGTCGGGGGTCGACTGTTCCCTGCTaGCCAGCTGTGGGTGTGGAGCCAGTGACTTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KAASCRGSTVPC*PAVGVEPVTLP Trigger: AGGCAAAGTCACTGGCTCCACACCCACAGCTGGCCAGCAGGGAACAGTCGACCCCCGACACGAAGCGGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 72 bp | AGAAAAGCCGCTTCGTGTCGGGGGTCGACTGTTCCCTaGTGGCCAGCTGTGGGTGTGGAGCCAGTGACTTTG | + |
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Preference number: 6 (lower is better) Translates to: RKAASCRGSTVP*WPAVGVEPVTL Trigger: CAAAGTCACTGGCTCCACACCCACAGCTGGCCAGCAGGGAACAGTCGACCCCCGACACGAAGCGGCTTTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CCA 72 bp | TGGAGGTGGGCGTGGGGTACATGGGCCCTAGGAGAATaGGGTGTGAGAGACTCCCCTGGGCTTATGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WRWAWGTWALGE*GVRDSPGLMAL Trigger: CAAAGCCATAAGCCCAGGGGAGTCTCTCACACCCCATTCTCCTAGGGCCCATGTACCCCACGCCCACCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563004.2 ENST00000565312.3 |
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| CDS CCA 72 bp | GGAAAGAGCCTGGTGGGGGACTTCGGTCCACAGGTGTaGATGTTCCAACCTTTCTCTGGCAGGGTCGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: GKSLVGDFGPQV*MFQPFSGRVGV Trigger: CACCCCGACCCTGCCAGAGAAAGGTTGGAACATCCACACCTGTGGACCGAAGTCCCCCACCAGGCTCTTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 72 bp | AACTGGTGTCAGCTCGAAACCCTCTGTGGTCTGCAGTaGTCAGCCTGGCTTTCCAGGTCTGGGCAGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: NWCQLETLCGLQ*SAWLSRSGQLP Trigger: AGGGAGCTGCCCAGACCTGGAAAGCCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | ATGGGCCCTAGGAGAATGGGGTGTGAGAGACTCCCCTaGGCTTATGGCTTTGGTGGCACCTCAGGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: MGPRRMGCERLP*AYGFGGTSGCG Trigger: TCCACAGCCTGAGGTGCCACCAAAGCCATAAGCCCAGGGGAGTCTCTCACACCCCATTCTCCTAGGGCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563004.2 ENST00000565312.3 |
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| CDS CCA 72 bp | TGTGGATGTTCCAACCTTTCTCTGGCAGGGTCGGGGTaGGGGCACCAGGTAGCTGCAACCTGTTCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CGCSNLSLAGSG*GHQVAATCSFS Trigger: GCTGAAGGAACAGGTTGCAGCTACCTGGTGCCCCCACCCCGACCCTGCCAGAGAAAGGTTGGAACATCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | CCCCTGGGCTTATGGCTTTGGTGGCACCTCAGGCTGTaGAATGGGGTGGCGAGTCTTTGGAAGTCACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLGLWLWWHLRL*NGVASLWKSQS Trigger: GCTCTGTGACTTCCAAAGACTCGCCACCCCATTCCACAGCCTGAGGTGCCACCAAAGCCATAAGCCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CAA 90 bp | CCTTGCTGCCTTGCTGTCATGTCACCTGCTGTCTCACTGGGTCATTaGGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCAACTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: PCCLAVMSPAVSLGH*GVCPSHACIFPTGV Trigger: GACACCAGTTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAAGGCAGCAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 90 bp | TGGCCAGCTGTGGGTGTGGAGCCAGTGACTTTGCCTCTTCACATCTaGGTGACTCCGTGGCTGTGTGGACACAGGATTGCAGGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WPAVGVEPVTLPLHI*VTPWLCGHRIAGAG Trigger: TCCTGCCCCTGCAATCCTGTGTCCACACAGCCACGGAGTCACCAAGATGTGAAGAGGCAAAGTCACTGGCTCCACACCCACAGCTGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CAA 90 bp | TCGACTGTTCCCTGCTGGCCAGCTGTGGGTGTGGAGCCAGTGACTTaGCCTCTTCACATCTTGGTGACTCCGTGGCTGTGTGGACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: STVPCWPAVGVEPVT*PLHILVTPWLCGHR Trigger: CCTGTGTCCACACAGCCACGGAGTCACCAAGATGTGAAGAGGCAAAGTCACTGGCTCCACACCCACAGCTGGCCAGCAGGGAACAGTCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS TCA 72 bp | GACACATGGCAGAGCCGGTGCGCTGGCTGTATGGAGTaGGGACTAATGGGGAATCAAGGACGTCCAGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DTWQSRCAGCME*GLMGNQGRPAV Trigger: CACAGCTGGACGTCCTTGATTCCCCATTAGTCCTCACTCCATACAGCCAGCGCACCGGCTCTGCCATGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 72 bp | ATGTCACCTGCTGTCTCACTGGGTCATTTGGGCGTGTaGCCCTCGCACGCCTGTATCTTCCCAACTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: MSPAVSLGHLGV*PSHACIFPTGV Trigger: GACACCAGTTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 72 bp | CTTGCTGTCATGTCACCTGCTGTCTCACTGGGTCATTaGGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LAVMSPAVSLGH*GVCPSHACIFP Trigger: TGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 90 bp | CATGCCTGCCTCTGTGTAGGCCCCAGTCTCTTTCCCTTTAAGAACTaGGGTCTGAGAGGACAAGCGCATGTCGCACGCACACACACACGC | + |
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Preference number: 6 (lower is better) Translates to: HACLCVGPSLFPFKN*GLRGQAHVARTHTR Trigger: GCGTGTGTGTGTGCGTGCGACATGCGCTTGTCCTCTCAGACCCAAGTTCTTAAAGGGAAAGAGACTGGGGCCTACACAGAGGCAGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 72 bp | AATGGGGCAACTTGGGCCCACAAAGGGCCAGAGACTTaGCCCGAGTCACAGAGTAGACTAGAGCCCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: NGATWAHKGPET*PESQSRLEPRS Trigger: AGACCTGGGCTCTAGTCTACTCTGTGACTCGGGTCAAGTCTCTGGCCCTTTGTGGGCCCAAGTTGCCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | GTATCTTCCCAACTGGTGTCAGCTCGAAACCCTCTGTaGTCTGCAGTGCTCAGCCTGGCTTTCCAGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSSQLVSARNPL*SAVLSLAFQVW Trigger: CCAGACCTGGAAAGCCAGGCTGAGCACTGCAGACCACAGAGGGTTTCGAGCTGACACCAGTTGGGAAGATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | TTGCTGTCATGTCACCTGCTGTCTCACTGGGTCATTTaGGCGTGTGCCCCTCGCACGCCTGTATCTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: LLSCHLLSHWVI*ACAPRTPVSSQ Trigger: TTGGGAAGATACAGGCGTGCGAGGGGCACACGCCCAAATGACCCAGTGAGACAGCAGGTGACATGACAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 72 bp | GGACGTCCAGCTGTGGATGGCAGAAGGGCCACTGTCTaGAGTGGGAAGTCTGGACATTCCCAAAGGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: GRPAVDGRRATV*SGKSGHSQRSL Trigger: AAGACTCCTTTGGGAATGTCCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCCACAGCTGGACGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CCA 72 bp | CTCCCGGGTGAAGCTCCCACCACAGACCAGCACTCCTaGGTTCTTCATGAAAATCTCATGGAGGATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LPGEAPTTDQHS*VLHENLMEDPL Trigger: CAGTGGATCCTCCATGAGATTTTCATGAAGAACCCAGGAGTGCTGGTCTGTGGTGGGAGCTTCACCCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CCA 72 bp | AGGACTAATGGGGAATCAAGGACGTCCAGCTGTGGATaGCAGAAGGGCCACTGTCTGAAGTGGGAAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTNGESRTSSCG*QKGHCLKWEVW Trigger: CCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCCACAGCTGGACGTCCTTGATTCCCCATTAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CAA 72 bp | GTGGGTGTGGAGCCAGTGACTTTGCCTCTTCACATCTaGGTGACTCCGTGGCTGTGTGGACACAGGATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VGVEPVTLPLHI*VTPWLCGHRIA Trigger: TGCAATCCTGTGTCCACACAGCCACGGAGTCACCAAGATGTGAAGAGGCAAAGTCACTGGCTCCACACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 72 bp | GGACAAGCGCATGTCGCACGCACACACACACGCACATaGATACACACCCTTACAAGATGCACAGCCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: GQAHVARTHTRT*IHTLTRCTATK Trigger: TTTGGTGGCTGTGCATCTTGTAAGGGTGTGTATGCATGTGCGTGTGTGTGTGCGTGCGACATGCGCTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 72 bp | TCTCTAGCACTTAGTACACGGCCTGTACAGAGCAGATaGTCGGCAAGGATTTCAAGGATTCAGGGCGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SLALSTRPVQSR*SARISRIQGGE Trigger: CTCGCCGCCCTGAATCCTTGAAATCCTTGCCGAGCATCTGCTCTGTACAGGCCGTGTACTAAGTGCTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CCA 72 bp | CAGAGAAGAGAGACAACTTGCTCAAGGCCATTTGATTaGAGGTTGCCTGACTCCTGGAGCTGCTCTTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: QRRETTCSRPFD*RLPDSWSCSSP Trigger: CGGGGAAGAGCAGCTCCAGGAGTCAGGCAACCTCCAATCAAATGGCCTTGAGCAAGTTGTCTCTCTTCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CAA 72 bp | CTCTGTGTAGGCCCCAGTCTCTTTCCCTTTAAGAACTaGGGTCTGAGAGGACAAGCGCATGTCGCACGCACA | + |
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Preference number: 6 (lower is better) Translates to: LCVGPSLFPFKN*GLRGQAHVART Trigger: TGTGCGTGCGACATGCGCTTGTCCTCTCAGACCCAAGTTCTTAAAGGGAAAGAGACTGGGGCCTACACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | GGATGGCAGAAGGGCCACTGTCTGAAGTGGGAAGTCTaGACATTCCCAAAGGAGTCTTTGAAAGACTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GWQKGHCLKWEV*TFPKESLKDWV Trigger: GACCCAGTCTTTCAAAGACTCCTTTGGGAATGTCCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CAA 90 bp | TCGGAGGACACCCAGCTGGTGTCCACTGCAGAACTGATTGCTTGTTaGCTGGTGAGAGAAATCCTCACATATGTGGGCACAGAAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SEDTQLVSTAELIAC*LVREILTYVGTEVF Trigger: GAAGACTTCTGTGCCCACATATGTGAGGATTTCTCTCACCAGCAAACAAGCAATCAGTTCTGCAGTGGACACCAGCTGGGTGTCCTCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CCA 72 bp | CCTGTTCCTTCAGCACCTGGGAGGAGACACAGAGTCTaGTTCCCTGAAGCCAAATGTTTCTTCTTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVPSAPGRRHRV*FPEAKCFFFVL Trigger: GAGGACAAAGAAGAAACATTTGGCTTCAGGGAACCAGACTCTGTGTCTCCTCCCAGGTGCTGAAGGAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | TCCAGCTGTGGATGGCAGAAGGGCCACTGTCTGAAGTaGGAAGTCTGGACATTCCCAAAGGAGTCTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SSCGWQKGHCLK*EVWTFPKESLK Trigger: TTTCAAAGACTCCTTTGGGAATGTCCAGACTTCCCACTTCAGACAGTGGCCCTTCTGCCATCCACAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS CAA 72 bp | ACCCAGCTGGTGTCCACTGCAGAACTGATTGCTTGTTaGCTGGTGAGAGAAATCCTCACATATGTGGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TQLVSTAELIAC*LVREILTYVGT Trigger: TGTGCCCACATATGTGAGGATTTCTCTCACCAGCAAACAAGCAATCAGTTCTGCAGTGGACACCAGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 72 bp | AGCTCCCACCACAGACCAGCACTCCTGGGTTCTTCATaGAAATCTCATGGAGGATCCACTGGAGACATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSHHRPALLGSS*KSHGGSTGDIF Trigger: AAAAATGTCTCCAGTGGATCCTCCATGAGATTTTCATGAAGAACCCAGGAGTGCTGGTCTGTGGTGGGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS GCA 72 bp | AGATGCACAGCCACCAAAAAGCCTAATAAAGCAAGGTaGCCAAGACCACGGTTCAGGATCCGTAAAAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCTATKKPNKAR*PRPRFRIRKNG Trigger: GCCATTTTTACGGATCCTGAACCGTGGTCTTGGGCACCTTGCTTTATTAGGCTTTTTGGTGGCTGTGCATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS CCA 72 bp | CAGGAGGCTCAAATCCAGCATAGATTCCTGAAGTCCTaGGTCCAAGTTCTAGCTCTGCTACTGACTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QEAQIQHRFLKS*VQVLALLLTSC Trigger: ACAAGAAGTCAGTAGCAGAGCTAGAACTTGGACCCAGGACTTCAGGAATCTATGCTGGATTTGAGCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 72 bp | CACGGTTCAGGATCCGTAAAAATGGCCGGAGATAATTaGCTGCAACCTATTCACTGCAAATGGGGCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: HGSGSVKMAGDN*LQPIHCKWGNL Trigger: CAAGTTGCCCCATTTGCAGTGAATAGGTTGCAGTCAATTATCTCCGGCCATTTTTACGGATCCTGAACCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 72 bp | AGCAGAAAGGCAATGAGTTTAGCAGCTCTGTTAGGTTaGATGCACACTGGAGGTCATGATGTCCTGCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRKAMSLAALLG*MHTGGHDVLLG Trigger: ACCAAGCAGGACATCATGACCTCCAGTGTGCATTCAACCTAACAGAGCTGCTAAACTCATTGCCTTTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGCATTTCGGATGCCACTTTGTTTGCCAATGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CVCVCVCVCVCV*HFGCHFVCQWD Trigger: ATCCCATTGGCAAACAAAGTGGCATCCGAAATGTCACACACACACACACACACACACACACACACACACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000570122.1 |
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| CDS GCA 72 bp | TTCTTGTCAAACTCTGGTCTGTGGAATATACATGCCTaGCTCTGTGTAGGCCCCAGTCTCTTTCCCTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FLSNSGLWNIHA*LCVGPSLFPFK Trigger: CTTAAAGGGAAAGAGACTGGGGCCTACACAGAGGCAGGCATGTATATTCCACAGACCAGAGTTTGACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS TCA 72 bp | GGCCAAGATATGCAGATCGATTCATCAGTAATCCACTaGCCACCTCCATTTAGGTTGGGAGCCTCTTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GQDMQIDSSVIH*PPPFRLGASLS Trigger: AGATAAAGAGGCTCCCAACCTAAATGGAGGTGGTCAGTGGATTACTGATGAATCGATCTGCATATCTTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 72 bp | CATCACTGGCCCAGACATCAAAAGCACACATCCCTGTaGTATTCCCCTTCAAAGAGCTTCATATCTAATATC | + |
|
Preference number: 6 (lower is better) Translates to: HHWPRHQKHTSL*YSPSKSFISNI Trigger: GATATTAGATATGAAGCTCTTTGAAGGGGAATAGCACAGGGATGTGTGCTTTTGATGTCTGGGCCAGTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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| CDS GCA 72 bp | AAAATTGTGACTATATTTATGAGACAGAGAGGGTGTTaGAGGAGAGAGGAGAGGCAGAGCAGAAAGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: KIVTIFMRQRGC*RREERQSRKAM Trigger: CATTGCCTTTCTGCTCTGCCTCTCCTCTCTCCTGCAACACCCTCTCTGTCTCATAAATATAGTCACAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS CAA 72 bp | GAAAATTGTGACTATATTTATGAGACAGAGAGGGTGTaGCAGGAGAGAGGAGAGGCAGAGCAGAAAGGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: ENCDYIYETERV*QERGEAEQKGN Trigger: ATTGCCTTTCTGCTCTGCCTCTCCTCTCTCCTGCAACACCCTCTCTGTCTCATAAATATAGTCACAATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000565312.3 |
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| CDS TCA 72 bp | CAGTTAGACTTTAAACTCCCTAAGAGCAGAGGAGGGTaGTTTTGGCCAAGATATGCAGATCGATTCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLDFKLPKSRGG*FWPRYADRFIS Trigger: ACTGATGAATCGATCTGCATATCTTGGCCAAAATCACCCTCCTCTGCTCTTAGGGAGTTTAAAGTCTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563004.2 |
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