RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAQR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000163291

Ensembl transcript IDs: ENST00000342820.10, ENST00000395594.2, ENST00000505715.1, ENST00000508599.1, ENST00000511594.5, ENST00000512299.5, ENST00000512733.5, ENST00000512760.5, ENST00000515541.1, ENST00000515853.5

Found 464 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATTGCTGCGTGAGGTAATTGGGATGAATCTGCGCAAAGAACACTaGCAGGATCATAGCAAGCACTGTGATCAAGTACACCTGACGCCA +
Preference number: 1 (lower is better)
Translates to: PLLREVIGMNLRKEH*QDHSKHCDQVHLTP
Trigger: TGGCGTCAGGTGTACTTGATCACAGTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAGATTCATCCCAATTACCTCACGCAGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR CCA 90 bp TATGGCCTTGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACTaGGATATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAA +
Preference number: 1 (lower is better)
Translates to: YGLASSTHNAGNPHH*DIQDYKFRELKALE
Trigger: TTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR TCA 90 bp CCTCTTGCTGGTGGAAAATCTAAGGTGGAGCCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCT +
Preference number: 1 (lower is better)
Translates to: PLAGGKSKVEPTLLC*SSPGRAVFLQVSYS
Trigger: AGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGGCTCCACCTTAGATTTTCCACCAGCAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
3UTR CCA 90 bp TCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCAGGGTTTCTCACCCTTTCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: SVVKNQVHKGMPEDL*DGLFRPGFLTLSSF
Trigger: GAAAGAAGAAAGGGTGAGAAACCCTGGCCTAAACAATCCATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR CCA 90 bp AGTTGTCCAGAATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATaGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: SCPELFSVILALPGR*VVFNSVACPRSVPK
Trigger: TTTGGGAACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAATTCTGGACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR TCA 90 bp TCCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCAGTaGAGAGTAGGAATCACTCCATATCCCGAAACAGAACAAAAGATG +
Preference number: 1 (lower is better)
Translates to: SCTIGAPIPPLSQTQ*RVGITPYPETEQKM
Trigger: CATCTTTTGTTCTGTTTCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATTGGTGCTCCTATTGTACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR TCA 90 bp CAGCAAAGCAACCAGCAGGAATTCACAGGAATAGGCTTTGCCCCTTaGCATTTAATACAGGGCAAAGTATTATCTAGTAGGTACCTGCCA +
Preference number: 1 (lower is better)
Translates to: QQSNQQEFTGIGFAP*HLIQGKVLSSRYLP
Trigger: TGGCAGGTACCTACTAGATAATACTTTGCCCTGTATTAAATGTCAAGGGGCAAAGCCTATTCCTGTGAATTCCTGCTGGTTGCTTTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CCA 90 bp TTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGTaGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTTCC +
Preference number: 1 (lower is better)
Translates to: LRKSITIFKSDILSR*DAIRCDRHSLNLRS
Trigger: GGAACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
3UTR TCA 90 bp GGACAAGGCTTGCTATGTCTGTACTGCATGACATACACTGTTGACTaGTGCCACCAATATAACATCACTACTGCAAGGATATGCCATATT +
Preference number: 1 (lower is better)
Translates to: GQGLLCLYCMTYTVD*CHQYNITTARICHI
Trigger: AATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGTCAACAGTGTATGTCATGCAGTACAGACATAGCAAGCCTTGTCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
3UTR TCA 90 bp AATGTGAAACATAGTCAGGACAAGGCTTGCTATGTCTGTACTGCATaGCATACACTGTTGACTGATGCCACCAATATAACATCACTACTG +
Preference number: 1 (lower is better)
Translates to: NVKHSQDKACYVCTA*HTLLTDATNITSLL
Trigger: CAGTAGTGATGTTATATTGGTGGCATCAGTCAACAGTGTATGTCATGCAGTACAGACATAGCAAGCCTTGTCCTGACTATGTTTCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
3UTR TCA 90 bp AATCTTCAAATCGGATATTCTGTCCAGGTGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCTTCGTTCCTGATTCTAATTCACAAA +
Preference number: 1 (lower is better)
Translates to: NLQIGYSVQVGCHKM*QTFPESSFLILIHK
Trigger: TTTGTGAATTAGAATCAGGAACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAATATCCGATTTGAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR TCA 90 bp AATCTTCAAATCGGATATTCTGTCCAGGTGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCTTCGTTCCTGATTCTAAAATATGAT +
Preference number: 1 (lower is better)
Translates to: NLQIGYSVQVGCHKM*QTFPESSFLILKYD
Trigger: ATCATATTTTAGAATCAGGAACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAATATCCGATTTGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CCA 90 bp CTTAAGGGTAGTTTCAGTTCTGGATCATTATCTCATTACACTACTTaGGAATTCTGGTACAAAATTTCAGAGGACTGTATTTACACCTCT +
Preference number: 1 (lower is better)
Translates to: LKGSFSSGSLSHYTT*EFWYKISEDCIYTS
Trigger: AGAGGTGTAAATACAGTCCTCTGAAATTTTGTACCAGAATTCCCAAGTAGTGTAATGAGATAATGATCCAGAACTGAAACTACCCTTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CCA 90 bp CAGCACTCAATAAAAGTTTGGCTCTATTATGGGATGGTTCAATTCTaGTTTAAGGAAGGAAGAAAGGTTATTATATATGTACCACTAAGC +
Preference number: 1 (lower is better)
Translates to: QHSIKVWLYYGMVQF*FKEGRKVIIYVPLS
Trigger: GCTTAGTGGTACATATATAATAACCTTTCTTCCTTCCTTAAACCAGAATTGAACCATCCCATAATAGAGCCAAACTTTTATTGAGTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CAA 90 bp AGGTTCATTTCAGGGTCAAGACAGGGCCATCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACTGGGATA +
Preference number: 2 (lower is better)
Translates to: RFISGSRQGHLDSMA*QVAPTMLGTPTTGI
Trigger: TATCCCAGTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGATGGCCCTGTCTTGACCCTGAAATGAACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp TGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGCTTTCCCAACACACGTaGCGAGTGGTACAATCCCTT +
Preference number: 2 (lower is better)
Translates to: WPCLEDGWSSIQWHVLDLLSQHT*RVVQSL
Trigger: AAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAG...CAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: SVILALPGRWVVFNSVACMPEDL*DGLFRP
Trigger: TGGCCTAAACAATCCATCCCACAGATCCTCAGGCAT...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CCA 90 bp CAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGCCCTGCCTGGAAGATaGGTGGTCTTCAATTCAGTG +
Preference number: 2 (lower is better)
Translates to: QEVPVYCLRVIDCCPLAGALPGR*VVFNSV
Trigger: CACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC...ACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR CAA 90 bp AAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATGGATaGTTTAGGCCAGGGTTTCTCACCCTTTCTTCTTTCCCAACACAC +
Preference number: 2 (lower is better)
Translates to: KNQVHKGMPEDLWDG*FRPGFLTLSSFPTH
Trigger: GTGTGTTGGGAAAGAAGAAAGGGTGAGAAACCCTGGCCTAAACAATCCATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR CAA 90 bp ATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGGATGAATCTGCGCAAAGAACACTGC +
Preference number: 2 (lower is better)
Translates to: ISRNRTKDDRTEPLP*LREVIGMNLRKEHC
Trigger: GCAGTGTTCTTTGCGCAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR CAA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGCGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: HSISRNRTKDDRTEP*PLLREVIGMNLRKE
Trigger: TTCTTTGCGCAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCCTTTCCCAACACACGTaGCGAGTGGTACAATCCCTT +
Preference number: 2 (lower is better)
Translates to: TDATNITSLLQGYAIFGGLSQHT*RVVQSL
Trigger: AAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAG...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTACCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
3UTR-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACACCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: QRVESSGILGSKTCNPLTPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp TTTTCCTCAGCAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCCCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: FSSAGGTCLLFKSDRLLSPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...GGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTGCTGAGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR CCA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATAGAAAGTGGTTGATGTaGGTCTTGAACCCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDRKWLM*VLNPSS
Trigger: ACTGCTTGGGTTCAAGACCCACATCAACCACTTTCT...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAGCCCTGCCTGGAAGATaGGTGGTCTTCAATTCAGTG +
Preference number: 2 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRALPGR*VVFNSV
Trigger: CACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCAATTCTGGCCCTGCCTaGAAGATGGGTGGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: TDATNITSLLQGYAIFGGNSGPA*KMGGLQ
Trigger: TTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATT...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR CAA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTTGTCCTGGAAAGTACCGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: TNITSLLQGYAIFGG*IRGSLVVLESTALG
Trigger: TCCCAGAGCGGTACTTTCCAGGACAACTAAACTACCTCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCGTGACAGACATTCCCTaGATCTTCGTTCCTGATTCT +
Preference number: 2 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICVTDIP*IFVPDS
Trigger: AGAATCAGGAACGAAGATTCAGGGAATGTCTGTCAC...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGTGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR CCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCA +
Preference number: 2 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYMPEDL*DGLFRP
Trigger: TGGCCTAAACAATCCATCCCACAGATCCTCAGGCAT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CCA 90 bp GCAAAGTATTATCTAGTAGGTACCTGCCAAATGGAGAGTTGTACAGTTTTACGGGGGAACCCCCACCACTaGGATATTCAGGACTACAAA +
Preference number: 2 (lower is better)
Translates to: AKYYLVGTCQMESCTVLRGNPHH*DIQDYK
Trigger: TTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCC...CCGTAAAACTGTACAACTCTCCATTTGGCAGGTACCTACTAGATAATACTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp TTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATCCTCATGTTTACAACGCGTACAATCCCTTCTCTaGTTCACCGTGGAAGTGATT +
Preference number: 2 (lower is better)
Translates to: FNSVACPRSVPKSSCLQRVQSLL*FTVEVI
Trigger: AATCACTTCCACGGTGAATCAGAGAAGGGATTGTAC...GCGTTGTAAACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR TCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAACACAAAGGAATGCCTaGGGATCTGTGGGATGGATT +
Preference number: 2 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRTQRNA*GSVGWI
Trigger: AATCCATCCCACAGATCCTCAGGCATTCCTTTGTGT...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR TCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
3UTR-3UTR TCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCGCATTAAGCATAGGCTaGAACAACACTTGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICALSIG*NNTCLD
Trigger: ATCAAGGCAAGTGTTGTTTCAGCCTATGCTTAATGC...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR GCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCCACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 2 (lower is better)
Translates to: TDATNITSLLQGYAIFGGHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR GCA 90 bp ACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATCCTCACTGTCTCTTCTaGACACCTACGAGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: TPDASSYYNKMRKILLRHPHCLF*TPTSGL
Trigger: CAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGG...ATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR-3UTR CCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACATGCCTGGAAGATGGGTaGTCTTCAATTCAGTGGCAT +
Preference number: 2 (lower is better)
Translates to: QRVESSGILGSKTCNPLTCLEDG*SSIQWH
Trigger: ATGCCACTGAATTGAAGACCACCCATCTTCCAGGCA...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGAGGGAACCCCCACCACTaGGATATTCAGGACTACAAA +
Preference number: 2 (lower is better)
Translates to: RVESSGILGSKTCNPLTRGNPHH*DIQDYK
Trigger: TTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCC...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CCA 90 bp AAGCACTGTGATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTACTGCACACCTACGAGTaGCTTGACCTTTATACCAGG +
Preference number: 2 (lower is better)
Translates to: KHCDQVHLTPVVITIKCVLHTYE*LDLYTR
Trigger: CCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAG...TACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATCACAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR-3UTR TCA 90 bp GCAAAGTATTATCTAGTAGGTACCTGCCAAATGGAGAGTTGTACAGTTTTACGGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: AKYYLVGTCQMESCTVLRGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...CCGTAAAACTGTACAACTCTCCATTTGGCAGGTACCTACTAGATAATACTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR GCA 90 bp GATCTGTTCCCAAATCCTCATGTTTACAACGCAGGTTTTCCCTTGTATTTCCATAAGTACACAAAGGAATaGCTGAGGATCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: DLFPNPHVYNAGFPLYFHKYTKE*LRICGM
Trigger: CATCCCACAGATCCTCAGGCATTCCTTTGTGTACTT...ATGGAAATACAAGGGAAAACCTGCGTTGTAAACATGAGGATTTGGGAACAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR GCA 90 bp ACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATCTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 2 (lower is better)
Translates to: TPDASSYYNKMRKILLRHLRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...ATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR CCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTAGTGGAAAATCTAAGGTaGAGCCCACTCTTCTATGCT +
Preference number: 2 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILVENLR*SPLFYA
Trigger: AGCATAGAAGAGTGGGCTCCACCTTAGATTTTCCAC...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
3UTR-3UTR CCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TDATNITSLLQGYAIFGGTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 2 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
3UTR-3UTR TCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 2 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
3UTR-3UTR TCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTAGCTGGGAAACAATTATaGGATAGACTCAGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVAGKQL*DRLSLP
Trigger: GGGGAGACTGAGTCTATCTCATAATTGTTTCCCAGC...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR GCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGACTTCACGTAAGCACTaGCAAATGGAGAGTTGTACA +
Preference number: 2 (lower is better)
Translates to: LFRFILFLQIGSRREHPQTSRKH*QMESCT
Trigger: TGTACAACTCTCCATTTGGCAGTGCTTACGTGAAGT...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR CCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTAACACACGTGACGAGTaGTACAATCCCTTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: WFILGFGTSRKHCQMESCNTRDE*YNPFSD
Trigger: ATCAGAGAAGGGATTGTACCACTCGTCACGTGTGTT...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACATGGTCTTCAATTCAGTaGCATGTCCTAGATCTGTTC +
Preference number: 2 (lower is better)
Translates to: QRVESSGILGSKTCNPLTWSSIQ*HVLDLF
Trigger: GAACAGATCTAGGACATGCCACTGAATTGAAGACCA...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTGATATTCTGTCCAGGTaGGATGCCATAAGATGTGAC +
Preference number: 2 (lower is better)
Translates to: WFILGFGTSRKHCQMESCDILSR*DAIRCD
Trigger: GTCACATCTTATGGCATCCCACCTGGACAGAATATC...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR TCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTACACAAAGGAATGCCTaGGGATCTGTGGGATGGATT +
Preference number: 2 (lower is better)
Translates to: NFPYRKTCTPFKFKETRITQRNA*GSVGWI
Trigger: AATCCATCCCACAGATCCTCAGGCATTCCTTTGTGT...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR TCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 2 (lower is better)
Translates to: LFRFILFLQIGSRREHPQYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAACAAATTCAGAGAGTTaGAAGCTCTGGAATTTTGGG +
Preference number: 2 (lower is better)
Translates to: QRVESSGILGSKTCNPLTTNSES*KLWNFG
Trigger: CCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGT...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000508599.1
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR GCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGAAGTACACAAAGGAATaGCTGAGGATCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQKYTKE*LRICGM
Trigger: CATCCCACAGATCCTCAGGCATTCCTTTGTGTACTT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTAACACACGTGACGAGTaGTACAATCCCTTCTCTGAT +
Preference number: 2 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSNTRDE*YNPFSD
Trigger: ATCAGAGAAGGGATTGTACCACTCGTCACGTGTGTT...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CCA 90 bp TTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGATAAGAATTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 2 (lower is better)
Translates to: FHLIFADRLEERASSDKNWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...ATTCTTATCTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512760.5
3UTR-3UTR TCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGTCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 2 (lower is better)
Translates to: LFRFILFLQIGSRREHPQSNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGA...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTAGGACCAGAGCACAGGTaGATAAGATTATTATCAAAT +
Preference number: 2 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILGPEHR*IRLLSN
Trigger: ATTTGATAATAATCTTATTCACCTGTGCTCTGGTCC...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGGAAATTCTCTTTGCTaGGATACTATACTAGCATGG +
Preference number: 2 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIGNSLC*DTILAW
Trigger: CCATGCTAGTATAGTATCTCAGCAAAGAGAATTTCC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTATGTCATGCAGCTTACTaGATTGCAGTTAGTGTAATA +
Preference number: 2 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILCHAAY*IAVSVI
Trigger: TATTACACTAACTGCAATTCAGTAAGCTGCATGACA...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCTGTATTGAAAATGGATaGTTTTGGTGCCGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: SCTVLRKSITIFKSDILSCIENG*FWCRAL
Trigger: AAGGGCACGGCACCAAAATCATCCATTTTCAATACA...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511594.5
ENST00000512733.5
3UTR-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATAACATTAGTGTTGCACTaGCTGATGGGAAAGATAGGG +
Preference number: 2 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRITLVLH*LMGKIG
Trigger: CCCTATCTTTCCCATCAGTCAGTGCAACACTAATGT...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511594.5
3UTR-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTAACTGAATTCTGTCCCTaGTTCACTGTTTTGTTTGAA +
Preference number: 2 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILTEFCP*FTVLFE
Trigger: TTCAAACAAAACAGTGAATCAGGGACAGAATTCAGT...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CCA 90 bp TTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGATAAGAATCTTGTTTGGTTATCTTaGATTGTGGTAACTTGCAGC +
Preference number: 2 (lower is better)
Translates to: FHLIFADRLEERASSDKNLVWLS*IVVTCS
Trigger: GCTGCAAGTTACCACAATCCAAGATAACCAAACAAG...ATTCTTATCTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CCA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGTTAACTCCTGCCAAATaGAGAGTTGTACAGTTTTAC +
Preference number: 2 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRLTPAK*RVVQFY
Trigger: GTAAAACTGTACAACTCTCCATTTGGCAGGAGTTAA...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511594.5
3UTR CAA 90 bp ATACAGGGCAAAGTATTATCTAGTAGGTACCTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATAT +
Preference number: 2 (lower is better)
Translates to: IQGKVLSSRYLPNGE*YSFTEVNHNLQIGY
Trigger: ATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGCAGGTACCTACTAGATAATACTTTGCCCTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 2 (lower is better)
Translates to: SCTVLRKSITIFKSDILSYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR TCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCATATTGCTTAACAACTaGATTCACCAGGTGGCCATA +
Preference number: 2 (lower is better)
Translates to: SCTVLRKSITIFKSDILSILLNN*IHQVAI
Trigger: TATGGCCACCTGGTGAATTCAGTTGTTAAGCAATAT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR TCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGGACCAGAGCACAGGTaGATAAGATTATTATCAAAT +
Preference number: 2 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIGPEHR*IRLLSN
Trigger: ATTTGATAATAATCTTATTCACCTGTGCTCTGGTCC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTGGAAATTCTCTTTGCTaGGATACTATACTAGCATGG +
Preference number: 2 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSGNSLC*DTILAW
Trigger: CCATGCTAGTATAGTATCTCAGCAAAGAGAATTTCC...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATGTATTGAAAATGGATaGTTTTGGTGCCGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRICIENG*FWCRAL
Trigger: AAGGGCACGGCACCAAAATCATCCATTTTCAATACA...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511594.5
ENST00000512733.5
3UTR-3UTR CCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTACTGAATTCACCAGGTaGCCATACCTAATTCACAAA +
Preference number: 2 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSTEFTR*PYLIHK
Trigger: TTTGTGAATTAGGTATGGCCACCTGGTGAATTCAGT...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
3UTR-3UTR CCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 2 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR CAA 90 bp GGATATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAATCCACTCACAAGAATTCAGTTATTA +
Preference number: 2 (lower is better)
Translates to: GYSGLQIQRVESSGI*GSKTCNPLTRIQLL
Trigger: TAATAACTGAATTCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAATATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 2 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRISNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGA...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR GCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACATTCTGAGTTATCAATaGAATGCTAACACATGCAGA +
Preference number: 2 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNILSYQ*NANTCR
Trigger: TCTGCATGTGTTAGCATTGCATTGATAACTCAGAAT...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 2 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 2 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR CCA 72 bp TGCCCTGCCTCACTGTCTCTTCTGCACACCTACGAGTaGCTTGACCTTTATACCAGGTTGGTTCTGTTCAGC +
Preference number: 3 (lower is better)
Translates to: CPASLSLLHTYE*LDLYTRLVLFS
Trigger: GCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR-3UTR CAA 90 bp TGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTGGTTGATGTGGGTCTaGAACCCAAGCAGTCTGACT +
Preference number: 3 (lower is better)
Translates to: WPCLEDGWSSIQWHVLDLWLMWV*NPSSLT
Trigger: AGTCAGACTGCTTGGGTTCAAGACCCACATCAACCA...CAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR TCA 72 bp TGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTTaGCCTTTATACCAGGTTGGTTCTGTTCAGCACTGT +
Preference number: 3 (lower is better)
Translates to: CLTVSSAHLRVA*PLYQVGSVQHC
Trigger: ACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR CCA 72 bp TGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTaGCATGTCCTAGATCTGTTCCCAAATCCTCATGTT +
Preference number: 3 (lower is better)
Translates to: WPCLEDGWSSIQ*HVLDLFPNPHV
Trigger: AACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CAA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGACCTGAGGAGAGCCTGTaGGACCCCTTCGGTGCCAAG +
Preference number: 3 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGPEESL*DPFGAK
Trigger: CTTGGCACCGAAGGGGTCCAACAGGCTCTCCTCAGG...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511594.5
3UTR GCA 72 bp TTTTCCTGCTTAAATGCCCTGCCTCACTGTCTCTTCTaGACACCTACGAGTGGCTTGACCTTTATACCAGGT +
Preference number: 3 (lower is better)
Translates to: FSCLNALPHCLF*TPTSGLTFIPG
Trigger: ACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGGGCATTTAAGCAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR CCA 72 bp GCAAGTAGCACCCACAATGCTGGGAACCCCCACCACTaGGATATTCAGGACTACAAATTCAGAGAGTTGAAA +
Preference number: 3 (lower is better)
Translates to: ASSTHNAGNPHH*DIQDYKFRELK
Trigger: TTTCAACTCTCTGAATTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp GTTGTCCTGGAAAGTACCGCTCTGGGACTTTGGAAATGTAGAATAGGAAAGCAAGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: VVLESTALGLWKCRIGKQDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...TTGCTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCAGGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR GCA 72 bp CGTGAGGTAATTGGGATGAATCTGCGCAAAGAACACTaGCAGGATCATAGCAAGCACTGTGATCAAGTACAC +
Preference number: 3 (lower is better)
Translates to: REVIGMNLRKEH*QDHSKHCDQVH
Trigger: GTGTACTTGATCACAGTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAGATTCATCCCAATTACCTCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR CCA 72 bp TTGTCCAGAATTGTTTTCTGTAATTCTGGCCCTGCCTaGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCC +
Preference number: 3 (lower is better)
Translates to: LSRIVFCNSGPA*KMGGLQFSGMS
Trigger: GGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAATTCTGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATGATCTGTGGGATGGATaGTTTAGGCCAGGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYDLWDG*FRPGFL
Trigger: GAGAAACCCTGGCCTAAACAATCCATCCCACAGATC...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CAA 90 bp GCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 3 (lower is better)
Translates to: ASSYYNKMRKILLRHSSPTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...TGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR CCA 72 bp AAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCAGGGTTTCTCACCCTT +
Preference number: 3 (lower is better)
Translates to: KNQVHKGMPEDL*DGLFRPGFLTL
Trigger: AAGGGTGAGAAACCCTGGCCTAAACAATCCATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR-3UTR CAA 90 bp TTTTCCTCAGCAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCGATCTGTGGGATGGATaGTTTAGGCCAGGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: FSSAGGTCLLFKSDRLLSDLWDG*FRPGFL
Trigger: GAGAAACCCTGGCCTAAACAATCCATCCCACAGATC...GGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTGCTGAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 3 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYLDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 3 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR TCA 72 bp ATCGGATATTCTGTCCAGGTGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCTTCGTTCCTGATTCTA +
Preference number: 3 (lower is better)
Translates to: IGYSVQVGCHKM*QTFPESSFLIL
Trigger: TAGAATCAGGAACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAATATCCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
3UTR GCA 72 bp TTCAGACTTGTTTGGTTATCTTGGATTGTGGTAACTTaGAGCCTGGAACCTAACTTTTCCTCAGCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: FRLVWLSWIVVT*SLEPNFSSAGG
Trigger: ACCTCCTGCTGAGGAAAAGTTAGGTTCCAGGCTGCAAGTTACCACAATCCAAGATAACCAAACAAGTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR GCA 72 bp TACACATGTAACATCATCACTTGGATTGTGGTAACTTaGAGCCTGGAACCTAACTTTTCCTCAGCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: YTCNIITWIVVT*SLEPNFSSAGG
Trigger: ACCTCCTGCTGAGGAAAAGTTAGGTTCCAGGCTGCAAGTTACCACAATCCAAGTGATGATGTTACATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
3UTR CCA 72 bp GATCTCAGATTTTATAGAGCAGGACTAGAACCTTGGTaGCTGTTCATTTCAGCCCTCTTAAGGATGGAGGTT +
Preference number: 3 (lower is better)
Translates to: DLRFYRAGLEPW*LFISALLRMEV
Trigger: AACCTCCATCCTTAAGAGGGCTGAAATGAACAGCCACCAAGGTTCTAGTCCTGCTCTATAAAATCTGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CAA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
3UTR TCA 72 bp CATAGTCAGGACAAGGCTTGCTATGTCTGTACTGCATaGCATACACTGTTGACTGATGCCACCAATATAACA +
Preference number: 3 (lower is better)
Translates to: HSQDKACYVCTA*HTLLTDATNIT
Trigger: TGTTATATTGGTGGCATCAGTCAACAGTGTATGTCATGCAGTACAGACATAGCAAGCCTTGTCCTGACTATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 3 (lower is better)
Translates to: LFRFILFLQIGSRREHPQAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
3UTR-3UTR CAA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 3 (lower is better)
Translates to: ANKGCSRRNISYYCCTKILDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR TCA 72 bp AACCAGCAGGAATTCACAGGAATAGGCTTTGCCCCTTaGCATTTAATACAGGGCAAAGTATTATCTAGTAGG +
Preference number: 3 (lower is better)
Translates to: NQQEFTGIGFAP*HLIQGKVLSSR
Trigger: CCTACTAGATAATACTTTGCCCTGTATTAAATGTCAAGGGGCAAAGCCTATTCCTGTGAATTCCTGCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CAA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTTTAGTTGTCCAGAATaGTTTTCTGTAATTCTGGCC +
Preference number: 3 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICFSCPE*FSVILA
Trigger: GGCCAGAATTACAGAAAACAATTCTGGACAACTAAA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR-3UTR CAA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTACAAATTCAGAGAGTaGAAAGCTCTGGAATTTTGG +
Preference number: 3 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICYKFRE*KALEFW
Trigger: CCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 3 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSLDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp GCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGACCTTTATACCAGGTaGGTTCTGTTCAGCACTGTT +
Preference number: 3 (lower is better)
Translates to: ASSYYNKMRKILLRHSSPDLYTR*VLFSTV
Trigger: AACAGTGCTGAACAGAACCAACCTGGTATAAAGGTC...TGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATTACAAATTCAGAGAGTaGAAAGCTCTGGAATTTTGG +
Preference number: 3 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYYKFRE*KALEFW
Trigger: CCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTA...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR TCA 72 bp TTGCTATGTCTGTACTGCATGACATACACTGTTGACTaGTGCCACCAATATAACATCACTACTGCAAGGATA +
Preference number: 3 (lower is better)
Translates to: LLCLYCMTYTVD*CHQYNITTARI
Trigger: TATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGTCAACAGTGTATGTCATGCAGTACAGACATAGCAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTCTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTC +
Preference number: 3 (lower is better)
Translates to: NFPYRKTCTPFKFKETRILPNGE*YSFTEV
Trigger: GACTTCCGTAAAACTGTACAACTCTCCATTTGGCAG...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CCA 72 bp GCTAAGACACAAAAATTGCATGGTAAGTATAATAGGTaGAGGAGGAAAGGTTGTAGGCCGGATGAAAATTTA +
Preference number: 3 (lower is better)
Translates to: AKTQKLHGKYNR*RRKGCRPDENL
Trigger: TAAATTTTCATCCGGCCTACAACCTTTCCTCCTCCACCTATTATACTTACCATGCAATTTTTGTGTCTTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CAA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGAGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAAT +
Preference number: 3 (lower is better)
Translates to: RVESSGILGSKTCNPLTRESSGI*GSKTCN
Trigger: ATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTC...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR TCA 72 bp GCTTCAGGCCCAAATATTAAGTGTTTATCAAGATTCTaGGTTATCAATGCAATGCTAACACATGCAGAAACC +
Preference number: 3 (lower is better)
Translates to: ASGPNIKCLSRF*VINAMLTHAET
Trigger: GGTTTCTGCATGTGTTAGCATTGCATTGATAACTCAGAATCTTGATAAACACTTAATATTTGGGCCTGAAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR TCA 72 bp TTGCCACAAGAACACTTAATAGCACGACTTTTTCAGTaGGTCATAATTACTGATACTCGAGTGATGACAGTA +
Preference number: 3 (lower is better)
Translates to: LPQEHLIARLFQ*VIITDTRVMTV
Trigger: TACTGTCATCACTCGAGTATCAGTAATTATGACTCACTGAAAAAGTCGTGCTATTAAGTGTTCTTGTGGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CAA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCTTTAGTTGTCCAGAATaGTTTTCTGTAATTCTGGCC +
Preference number: 3 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVFSCPE*FSVILA
Trigger: GGCCAGAATTACAGAAAACAATTCTGGACAACTAAA...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
3UTR-3UTR CAA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACTGCACAAAAGGCATTTaGGGAATAAGCTTCATCATC +
Preference number: 3 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNCTKGI*GISFII
Trigger: GATGATGAAGCTTATTCCCAAAATGCCTTTTGTGCA...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR-3UTR CAA 90 bp TCCGGATTTGCAAATAGACACAACTTTCAGTCTTACCCTGTTTATTGTTTAAGACTAGTTTTGAGGCGCTaGGGTACATTTGTTTTTAAT +
Preference number: 3 (lower is better)
Translates to: SGFANRHNFQSYPVYCLRLVLRR*GTFVFN
Trigger: ATTAAAAACAAATGTACCCAAGCGCCTCAAAACTAG...TCTTAAACAATAAACAGGGTAAGACTGAAAGTTGTGTCTATTTGCAAATCCGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR-3UTR CAA 90 bp TCCGGATTTGCAAATAGACACAACTTTCAGTCTTACCCTGTTTATTGTTTAAGATTAATATCACTAGTTTaGAGGCGCTTGGGTACATTT +
Preference number: 3 (lower is better)
Translates to: SGFANRHNFQSYPVYCLRLISLV*RRLGTF
Trigger: AAATGTACCCAAGCGCCTCAAAACTAGTGATATTAA...TCTTAAACAATAAACAGGGTAAGACTGAAAGTTGTGTCTATTTGCAAATCCGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR TCA 72 bp CCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTATTCCAATAGAAATTCC +
Preference number: 3 (lower is better)
Translates to: PVVITIKCVKYS*DIAAQYSNRNS
Trigger: GGAATTTCTATTGGAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508599.1
ENST00000512760.5
ENST00000515853.5
3UTR GCA 72 bp CCCATTCATCGTTGTTATTCAGATGTTTCTTATGATTaGCAACTAATTTTCACTTTCTGTACAAGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: PIHRCYSDVSYD*QLIFTFCTSSK
Trigger: TTTGCTGCTTGTACAGAAAGTGAAAATTAGTTGGCAATCATAAGAAACATCTGAATAACAACGATGAATGGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TCTAGATTCTATGGCCTTGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACCTACCGCGCTGCCGCTaGTGCCCAGGGCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRFYGLASSTHNAGNPHHLPRCR*CPGPGS
Trigger: AGAGCCGGGCCCTGGGCAGCAGCGGCAGCGCGGTAG...GTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR GCA 90 bp GCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTGAGGTCCTACCGCGCTaGCGCTGCTGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ALPGRWVVFNSVACPRSVEVLPR*RCCPGP
Trigger: GGGCCCTGGGCAGCAGCGGCAGCGCGGTAGGACCTC...AACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp GGGTGCAAAGTCCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCAAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: GCKVLYNRSTNSSIEPNPRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...TGGGTTTGGCTCAATGGAGGAATTGGTGCTCCTATTGTACAGGACTTTGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCGGAGCCCGCGGACGCTaGGCGAGGTCCTACCGCGCT +
Preference number: 4 (lower is better)
Translates to: TDATNITSLLQGYAIFGGGARGR*ARSYRA
Trigger: AGCGCGGTAGGACCTCGCGCAGCGTCCGCGGGCTCC...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
CDS-3UTR GCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATGGAGCCCGCGGACGCTaGGCGAGGTCCTACCGCGCT +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYGARGR*ARSYRA
Trigger: AGCGCGGTAGGACCTCGCGCAGCGTCCGCGGGCTCC...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR GCA 90 bp CAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAGCCCGCGGACGCTaGGCGAGGTCCTACCGCGCT +
Preference number: 4 (lower is better)
Translates to: QEVPVYCLRVIDCCPLAGGARGR*ARSYRA
Trigger: AGCGCGGTAGGACCTCGCGCAGCGTCCGCGGGCTCC...ACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR GCA 90 bp CTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCTGTTCAAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: LFCTPTSGLTFIPGWFCSRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...TGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
3UTR CAA 72 bp TCAGGGTCAAGACAGGGCCATCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATGCTGGGAACCCCCACC +
Preference number: 4 (lower is better)
Translates to: SGSRQGHLDSMA*QVAPTMLGTPT
Trigger: GGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGATGGCCCTGTCTTGACCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGACTACCGCGCTGCCGCTaGTGCCCAGGGCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGLPRCR*CPGPGS
Trigger: AGAGCCGGGCCCTGGGCAGCAGCGGCAGCGCGGTAG...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512733.5
CDS-3UTR GCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTGGAGCCCGCGGACGCTaGGCGAGGTCCTACCGCGCT +
Preference number: 4 (lower is better)
Translates to: WFILGFGTSRKHCQMESCGARGR*ARSYRA
Trigger: AGCGCGGTAGGACCTCGCGCAGCGTCCGCGGGCTCC...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp CCTGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGCCTCACTGTCTCTTCTaGACACCTACGAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PASLSLLHTYEWLDLYTRPHCLF*TPTSGL
Trigger: CAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGG...CCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR GCA 90 bp CACTGTCTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: HCLFCTPTSGLTFIPGWFASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...GAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR GCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTCTGAGGAGAGCCTGTTaGACCCCTTCGGTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRLRRAC*TPSVPS
Trigger: GCTTGGCACCGAAGGGGTCCAACAGGCTCTCCTCAG...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR TCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTCTCTTCAGCAGCTTCTaGTGCATCGTTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSLFSSF*CIVPGR
Trigger: GCGGCCGGGAACGATGCATCAGAAGCTGCTGAAGAG...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR TCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SVILALPGRWVVFNSVACPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR GCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTCTACCGCGCTGCCGCTaGTGCCCAGGGCCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRILPRCR*CPGPGS
Trigger: AGAGCCGGGCCCTGGGCAGCAGCGGCAGCGCGGTAG...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR GCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTGAGGTCCTACCGCGCTaGCGCTGCTGCCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDIEVLPR*RCCPGP
Trigger: GGGCCCTGGGCAGCAGCGGCAGCGCGGTAGGACCTC...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512733.5
CDS-3UTR CCA 90 bp TCTAGATTCTATGGCCTTGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACTGCCTGGAAGATGGGTaGTCTTCAATTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SRFYGLASSTHNAGNPHHCLEDG*SSIQWH
Trigger: ATGCCACTGAATTGAAGACCACCCATCTTCCAGGCA...GTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395594.2
3UTR CAA 72 bp CTGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTaGACCTTTATACCAGGTTGGTTCTGTTCAGCACTG +
Preference number: 4 (lower is better)
Translates to: LPHCLFCTPTSG*TFIPGWFCSAL
Trigger: CAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR TCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATCTCTTCAGCAGCTTCTaGTGCATCGTTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYLFSSF*CIVPGR
Trigger: GCGGCCGGGAACGATGCATCAGAAGCTGCTGAAGAG...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR GCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGATAAGAATAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: FHLIFADRLEERASSDKNRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...ATTCTTATCTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR GCA 90 bp GGGTGCAAAGTCCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCACTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GCKVLYNRSTNSSIEPNPLRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...TGGGTTTGGCTCAATGGAGGAATTGGTGCTCCTATTGTACAGGACTTTGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp GCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTTGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ALPGRWVVFNSVACPRSVCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...AACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR TCA 90 bp AATTCCTCCATTGAGCCAAACCCAGTGAAGAGTAGGAATCACTCCATATCCCGACCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NSSIEPNPVKSRNHSISRPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...TCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR TCA 90 bp GATGATAGAACGGAGCCTTTGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGAGCATACAGACCTTTTaGTACACAGCCTGGACGGCA +
Preference number: 4 (lower is better)
Translates to: DDRTEPLPLLREVIGMNLSIQTF*YTAWTA
Trigger: TGCCGTCCAGGCTGTGTATCAAAAGGTCTGTATGCT...CAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp GTGACGAGTGGTACAATCCCTTCTCTGATTCACCGTGGAAGTGATTTTAGCCCACTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VTSGTIPSLIHRGSDFSPLRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...TGGGCTAAAATCACTTCCACGGTGAATCAGAGAAGGGATTGTACCACTCGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTGCCCTGCCTGGAAGATaGGTGGTCTTCAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRALPGR*VVFNSV
Trigger: CACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp CTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCTGTTCACTGCACACCTACGAGTaGCTTGACCTTTATACCAGG +
Preference number: 4 (lower is better)
Translates to: LFCTPTSGLTFIPGWFCSLHTYE*LDLYTR
Trigger: CCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAG...TGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR TCA 90 bp AAGCACTGTGATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTACTCTTCAGCAGCTTCTaGTGCATCGTTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: KHCDQVHLTPVVITIKCVLFSSF*CIVPGR
Trigger: GCGGCCGGGAACGATGCATCAGAAGCTGCTGAAGAG...TACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATCACAGTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR TCA 90 bp GCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTAAGAAACCCAGCAAATaGCTCCAGATGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: ALPGRWVVFNSVACPRSVKKPSK*LQMFTV
Trigger: GACAGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...AACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCG +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDIRCTGG*HGAPGP
Trigger: CGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCT...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTAAGTACACAAAGGAATaGCTGAGGATCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: SVILALPGRWVVFNSVACKYTKE*LRICGM
Trigger: CATCCCACAGATCCTCAGGCATTCCTTTGTGTACTT...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp TCTAGATTCTATGGCCTTGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACACTACTGCAAGGATATaGCATATTTGGTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SRFYGLASSTHNAGNPHHTTARI*HIWWLD
Trigger: ATCAAGCCACCAAATATGGCATATCCTTGCAGTAGT...GTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATAATTCTGGCCCTGCCTaGAAGATGGGTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDNSGPA*KMGGLQ
Trigger: TTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATT...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTGGACTAGAACCTTGGTaGCTGTTCATTTCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRGLEPW*LFISAL
Trigger: GAGGGCTGAAATGAACAGCCACCAAGGTTCTAGTCC...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCTGTTCATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LFCTPTSGLTFIPGWFCSCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...TGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR TCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCCATGCAGTGGGGCCTaGGGCACATACTATCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVPCSGA*GTYYPW
Trigger: CCAGGGATAGTATGTGCCTCAGGCCCCACTGCATGG...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR GCA 90 bp GTTGTCCTGGAAAGTACCGCTCTGGGACTTTGGAAATGTAGAATAGGAAAGCAACTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VVLESTALGLWKCRIGKQLRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...TTGCTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCAGGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTACTTCACGTAAGCACTaGCAAATGGAGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SVILALPGRWVVFNSVACTSRKH*QMESCT
Trigger: TGTACAACTCTCCATTTGGCAGTGCTTACGTGAAGT...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp GCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTTTACAAAATCTTCTCTaGACGCACTTGCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ALPGRWVVFNSVACPRSVLQNLL*THLLKV
Trigger: TACCTTCAGCAAGTGCGTCCAGAGAAGATTTTGTAA...AACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDMPEDL*DGLFRP
Trigger: TGGCCTAAACAATCCATCCCACAGATCCTCAGGCAT...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR TCA 90 bp ATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACTCTTCAGCAGCTTCTaGTGCATCGTTCCCGGCCGC +
Preference number: 4 (lower is better)
Translates to: IQDYKFRELKALEFWDQKLFSSF*CIVPGR
Trigger: GCGGCCGGGAACGATGCATCAGAAGCTGCTGAAGAG...TTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR TCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTTGTACGGGTTGTCCTTaGGGGACCCGGGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDICTGCP*GTRGSA
Trigger: AGCAGATCCCCGGGTCCCTCAAGGACAACCCGTACA...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp CTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATTGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LEDGWSSIQWHVLDLFPNCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...ATTTGGGAACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR TCA 90 bp GTAATTGGGATGAATCTGCGCAAAGAACACTGCCAGGATCATAGCAAGCACTGTTGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: VIGMNLRKEHCQDHSKHCCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...ACAGTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAGATTCATCCCAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTTTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTGTGGTCATTAAATGCTaGCTGACATACAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SVILALPGRWVVFNSVACVVIKC*LTYRSV
Trigger: AACACTTCTGTATGTCAGTCAGCATTTAATGACCAC...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR GCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTCACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp GATGATAGAACGGAGCCTTTGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGTGGATTGTGGTAACTTaGAGCCTGGAACCTAACTTT +
Preference number: 4 (lower is better)
Translates to: DDRTEPLPLLREVIGMNLWIVVT*SLEPNF
Trigger: AAAGTTAGGTTCCAGGCTGCAAGTTACCACAATCCA...CAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR GCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTGCAATGCTAACACATaGAGAAACCGAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICCNANT*RNRGPE
Trigger: CTCTGGTCCTCGGTTTCTGCATGTGTTAGCATTGCA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp GATGATAGAACGGAGCCTTTGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: DDRTEPLPLLREVIGMNLTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...CAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTGATATTCTGTCCAGGTaGGATGCCATAAGATGTGAC +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRDILSR*DAIRCD
Trigger: GTCACATCTTATGGCATCCCACCTGGACAGAATATC...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
3UTR CAA 72 bp TCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTAATTGGGATGAATCTG +
Preference number: 4 (lower is better)
Translates to: SRNRTKDDRTEP*PLLREVIGMNL
Trigger: CAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTACTTTCCCAACACACGTaGCGAGTGGTACAATCCCTT +
Preference number: 4 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILLSQHT*RVVQSL
Trigger: AAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAG...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR TCA 90 bp CACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGACACAAAGGAATGCCTaGGGATCTGTGGGATGGATT +
Preference number: 4 (lower is better)
Translates to: HQYNITTARICHIWWLDPTQRNA*GSVGWI
Trigger: AATCCATCCCACAGATCCTCAGGCATTCCTTTGTGT...CGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR TCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR TCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAACCCACTCTTCTATGCTaGAGTTCACCAGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKPTLLC*SSPGRA
Trigger: TGCTCTGCCTGGTGAACTTCAGCATAGAAGAGTGGG...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp GGGTGCAAAGTCCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCAGGACCAGAGCACAGGTaGATAAGATTATTATCAAAT +
Preference number: 4 (lower is better)
Translates to: GCKVLYNRSTNSSIEPNPGPEHR*IRLLSN
Trigger: ATTTGATAATAATCTTATTCACCTGTGCTCTGGTCC...TGGGTTTGGCTCAATGGAGGAATTGGTGCTCCTATTGTACAGGACTTTGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR TCA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTTGTCATGCAGCTTACTaGATTGCAGTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: SVILALPGRWVVFNSVACCHAAY*IAVSVI
Trigger: TATTACACTAACTGCAATTCAGTAAGCTGCATGACA...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR TCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATGCTGGGAAACAATTATaGGATAGACTCAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYAGKQL*DRLSLP
Trigger: GGGGAGACTGAGTCTATCTCATAATTGTTTCCCAGC...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp GTTGTCCTGGAAAGTACCGCTCTGGGACTTTGGAAATGTAGAATAGGAAAGCAACACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: VVLESTALGLWKCRIGKQHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...TTGCTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCAGGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp CACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGTGCAATGCTAACACATaGAGAAACCGAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: HQYNITTARICHIWWLDPCNANT*RNRGPE
Trigger: CTCTGGTCCTCGGTTTCTGCATGTGTTAGCATTGCA...CGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAAATTCTGGCCCTGCCTaGAAGATGGGTGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRNSGPA*KMGGLQ
Trigger: TTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATT...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCGTGGAAAATCTAAGGTaGAGCCCACTCTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICVENLR*SPLFYA
Trigger: AGCATAGAAGAGTGGGCTCCACCTTAGATTTTCCAC...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAGGGAACCCCCACCACTaGGATATTCAGGACTACAAA +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTGNPHH*DIQDYK
Trigger: TTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCC...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
3UTR CAA 72 bp AACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGGATGAATCTGCGCAAA +
Preference number: 4 (lower is better)
Translates to: NRTKDDRTEPLP*LREVIGMNLRK
Trigger: TTTGCGCAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
3UTR CAA 72 bp ACATCACTACTGCAAGGATATGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTTGTCCTGGAAAGTACC +
Preference number: 4 (lower is better)
Translates to: TSLLQGYAIFGG*IRGSLVVLEST
Trigger: GGTACTTTCCAGGACAACTAAACTACCTCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: TDATNITSLLQGYAIFGGFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGACACAAAGGAATGCCTaGGGATCTGTGGGATGGATT +
Preference number: 4 (lower is better)
Translates to: LFRFILFLQIGSRREHPQTQRNA*GSVGWI
Trigger: AATCCATCCCACAGATCCTCAGGCATTCCTTTGTGT...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR TCA 90 bp CAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGTGACAGACATTCCCTaGATCTTCGTTCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: QEVPVYCLRVIDCCPLAGVTDIP*IFVPDS
Trigger: AGAATCAGGAACGAAGATTCAGGGAATGTCTGTCAC...ACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR TCA 90 bp AAGCACTGTGATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAGCATACAGACCTTTTaGTACACAGCCTGGACGGCA +
Preference number: 4 (lower is better)
Translates to: KHCDQVHLTPVVITIKCVSIQTF*YTAWTA
Trigger: TGCCGTCCAGGCTGTGTATCAAAAGGTCTGTATGCT...TACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATCACAGTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCG +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFASTGS*PARCNA
Trigger: CGCATTACATCGAGCTGGGCAGCTACCAGTACTGGC...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508599.1
ENST00000512760.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATCCTCATGTTTACAACGCAAGTACACAAAGGAATaGCTGAGGATCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: FNSVACPRSVPKSSCLQRKYTKE*LRICGM
Trigger: CATCCCACAGATCCTCAGGCATTCCTTTGTGTACTT...GCGTTGTAAACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR GCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTACTACTGCAAGGATATaGCATATTTGGTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRTTARI*HIWWLD
Trigger: ATCAAGCCACCAAATATGGCATATCCTTGCAGTAGT...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGACTTCACGTAAGCACTaGCAAATGGAGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLTSRKH*QMESCT
Trigger: TGTACAACTCTCCATTTGGCAGTGCTTACGTGAAGT...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR GCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTTGGATTGTGGTAACTTaGAGCCTGGAACCTAACTTT +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSWIVVT*SLEPNF
Trigger: AAAGTTAGGTTCCAGGCTGCAAGTTACCACAATCCA...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTTTACAAAATCTTCTCTaGACGCACTTGCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRLQNLL*THLLKV
Trigger: TACCTTCAGCAAGTGCGTCCAGAGAAGATTTTGTAA...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATAACACACGTGACGAGTaGTACAATCCCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYNTRDE*YNPFSD
Trigger: ATCAGAGAAGGGATTGTACCACTCGTCACGTGTGTT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAATGCCTGAGGATCTGTaGGATGGATTGTTTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRMPEDL*DGLFRP
Trigger: TGGCCTAAACAATCCATCCCACAGATCCTCAGGCAT...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGGGAACCCCCACCACTaGGATATTCAGGACTACAAA +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIGNPHH*DIQDYK
Trigger: TTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp GTAATTGGGATGAATCTGCGCAAAGAACACTGCCAGGATCATAGCAAGCACTGTTGTAACATCATCACTTaGATTGTGGTAACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: VIGMNLRKEHCQDHSKHCCNIIT*IVVTCS
Trigger: GCTGCAAGTTACCACAATCCAAGTGATGATGTTACA...ACAGTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAGATTCATCCCAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR CCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCGGTAAGTATAATAGGTaGAGGAGGAAAGGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICGKYNR*RRKGCR
Trigger: CCTACAACCTTTCCTCCTCCACCTATTATACTTACC...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGATTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACATTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAGTACAATCCCTTCTCTaGTTCACCGTGGAAGTGATT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTVQSLL*FTVEVI
Trigger: AATCACTTCCACGGTGAATCAGAGAAGGGATTGTAC...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR TCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTCTTTCCCAACACACGTaGCGAGTGGTACAATCCCTT +
Preference number: 4 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSLSQHT*RVVQSL
Trigger: AAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAG...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR TCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTTCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRSNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGA...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512760.5
CDS-3UTR TCA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGGTGACAGACATTCCCTaGATCTTCGTTCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRVTDIP*IFVPDS
Trigger: AGAATCAGGAACGAAGATTCAGGGAATGTCTGTCAC...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTAGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp TTTTCCTCAGCAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCCACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: FSSAGGTCLLFKSDRLLSHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...GGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTGCTGAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR GCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICLLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AAGCACTGTGATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTATGCAATGCTAACACATaGAGAAACCGAGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: KHCDQVHLTPVVITIKCVCNANT*RNRGPE
Trigger: CTCTGGTCCTCGGTTTCTGCATGTGTTAGCATTGCA...TACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATCACAGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR GCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAACAAGAAACCCCCTACTaGTATTTACCTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKQETPY*YLPLPS
Trigger: GGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTG...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCATCACAATACTGTCCTaGCAGGGCGGCCAAGACAAA +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSITILS*QGGQDK
Trigger: TTTGTCTTGGCCGCCCTGGCAGGACAGTATTGTGAT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTTTACAAAATCTTCTCTaGACGCACTTGCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSLQNLL*THLLKV
Trigger: TACCTTCAGCAAGTGCGTCCAGAGAAGATTTTGTAA...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATCAAAGCATACAGACCTaGAAGCAGAAAAGACAAATA +
Preference number: 4 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDQSIQT*KQKRQI
Trigger: TATTTGTCTTTTCTGCTTCCAGGTCTGTATGCTTTG...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGAGAAAGTGGTTGATGTaGGTCTTGAACCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LFRFILFLQIGSRREHPQRKWLM*VLNPSS
Trigger: ACTGCTTGGGTTCAAGACCCACATCAACCACTTTCT...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAACACACGTGACGAGTaGTACAATCCCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRNTRDE*YNPFSD
Trigger: ATCAGAGAAGGGATTGTACCACTCGTCACGTGTGTT...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGGATATTCTGTCCAGGTaGGATGCCATAAGATGTGAC +
Preference number: 4 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRDILSR*DAIRCD
Trigger: GTCACATCTTATGGCATCCCACCTGGACAGAATATC...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTACTGAATTCACCAGGTaGCCATACCTAATTCACAAA +
Preference number: 4 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSTEFTR*PYLIHK
Trigger: TTTGTGAATTAGGTATGGCCACCTGGTGAATTCAGT...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCGGGAACCCCCACCACTaGGATATTCAGGACTACAAA +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSGNPHH*DIQDYK
Trigger: TTTGTAGTCCTGAATATCCCAGTGGTGGGGGTTCCC...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: TDATNITSLLQGYAIFGGYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGAGTGACAGACATTCCCTaGATCTTCGTTCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: RVESSGILGSKTCNPLTRVTDIP*IFVPDS
Trigger: AGAATCAGGAACGAAGATTCAGGGAATGTCTGTCAC...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCCCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: TDATNITSLLQGYAIFGGPNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGG...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
CDS-3UTR TCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATATATTGCTTAACAACTaGATTCACCAGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYILLNN*IHQVAI
Trigger: TATGGCCACCTGGTGAATTCAGTTGTTAAGCAATAT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGGCTCATGTCAACTCATaGAGAAACTTGGGTAATATT +
Preference number: 4 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLAHVNS*RNLGNI
Trigger: AATATTACCCAAGTTTCTTCATGAGTTGACATGAGC...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR TCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATGGAAATTCTCTTTGCTaGGATACTATACTAGCATGG +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYGNSLC*DTILAW
Trigger: CCATGCTAGTATAGTATCTCAGCAAAGAGAATTTCC...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCCACCTACGAGTGGCTTaGCCTTTATACCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFHLRVA*PLYQVG
Trigger: ACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTG...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR GCA 90 bp ATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: IQDYKFRELKALEFWDQKLRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...TTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDILRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTCTGCGCAAAGAACACTaGCAGGATCATAGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRILRKEH*QDHSKH
Trigger: GTGCTTGCTATGATCCTGGCAGTGTTCTTTGCGCAG...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATACTACTGCAAGGATATaGCATATTTGGTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYTTARI*HIWWLD
Trigger: ATCAAGCCACCAAATATGGCATATCCTTGCAGTAGT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATCCTCATGTTTACAACGCTTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FNSVACPRSVPKSSCLQRLLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...GCGTTGTAAACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LFRFILFLQIGSRREHPQTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CCA 90 bp TTATTTCGTTTCATCTTATTTTTGCAGATAGGCTCGAGGAGAGAGCATCCTCAGTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LFRFILFLQIGSRREHPQWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...CTGAGGATGCTCTCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTCTGAAAATATTTTCTaGAAAGTACCGCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFSENIF*KVPLWD
Trigger: GTCCCAGAGCGGTACTTTCCAGAAAATATTTTCAGA...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGATGGTCTTCAATTCAGTaGCATGTCCTAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRWSSIQ*HVLDLF
Trigger: GAACAGATCTAGGACATGCCACTGAATTGAAGACCA...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CCA 90 bp AAGCACTGTGATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAGATATTCTGTCCAGGTaGGATGCCATAAGATGTGAC +
Preference number: 4 (lower is better)
Translates to: KHCDQVHLTPVVITIKCVDILSR*DAIRCD
Trigger: GTCACATCTTATGGCATCCCACCTGGACAGAATATC...TACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATCACAGTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR CCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTGTGGAAAATCTAAGGTaGAGCCCACTCTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: WFILGFGTSRKHCQMESCVENLR*SPLFYA
Trigger: AGCATAGAAGAGTGGGCTCCACCTTAGATTTTCCAC...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTACTGAATTCACCAGGTaGCCATACCTAATTCACAAA +
Preference number: 4 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFTEFTR*PYLIHK
Trigger: TTTGTGAATTAGGTATGGCCACCTGGTGAATTCAGT...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGACTGAATTCACCAGGTaGCCATACCTAATTCACAAA +
Preference number: 4 (lower is better)
Translates to: HQYNITTARICHIWWLDPTEFTR*PYLIHK
Trigger: TTTGTGAATTAGGTATGGCCACCTGGTGAATTCAGT...CGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
CDS-3UTR CCA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGGGCACATACTATCCCTaGTTATCCCAAAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRGTYYP*LSQKCR
Trigger: TCTACACTTTTGGGATAACCAGGGATAGTATGTGCC...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR TCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTAAGAAACCCAGCAAATaGCTCCAGATGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: WFILGFGTSRKHCQMESCKKPSK*LQMFTV
Trigger: GACAGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR TCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVCVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTTTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp GTTCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VHQAEQFSYKSATLLGLFSNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGA...AAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR TCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCGGATGCCATAAGATGTaGCAGACATTCCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVGCHKM*QTFPES
Trigger: AGATTCAGGGAATGTCTGTCACATCTTATGGCATCC...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp GCAAAGTATTATCTAGTAGGTACCTGCCAAATGGAGAGTTGTACAGTTTTACGGCCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: AKYYLVGTCQMESCTVLRPNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGG...CCGTAAAACTGTACAACTCTCCATTTGGCAGGTACCTACTAGATAATACTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAATATTGCTTAACAACTaGATTCACCAGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRILLNN*IHQVAI
Trigger: TATGGCCACCTGGTGAATTCAGTTGTTAAGCAATAT...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
CDS-3UTR TCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAAGCATTAAGCATAGGCTaGAACAACACTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKALSIG*NNTCLD
Trigger: ATCAAGGCAAGTGTTGTTTCAGCCTATGCTTAATGC...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAAATAGGCTTTGCCCCTTaGCATTTAATACAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKIGFAP*HLIQGK
Trigger: TTTGCCCTGTATTAAATGTCAAGGGGCAAAGCCTAT...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGACCCTTCTCTAATAGGTaGGCTGATTCTTTACACACT +
Preference number: 4 (lower is better)
Translates to: RVESSGILGSKTCNPLTRPFSNR*ADSLHT
Trigger: AGTGTGTAAAGAATCAGCTCACCTATTAGAGAAGGG...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATGTATTGAAAATGGATaGTTTTGGTGCCGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGCIENG*FWCRAL
Trigger: AAGGGCACGGCACCAAAATCATCCATTTTCAATACA...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511594.5
ENST00000512733.5
CDS-3UTR TCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGATGTATTGAAAATGGATaGTTTTGGTGCCGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RVESSGILGSKTCNPLTRCIENG*FWCRAL
Trigger: AAGGGCACGGCACCAAAATCATCCATTTTCAATACA...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCACATTAGTGTTGCACTaGCTGATGGGAAAGATAGGG +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVTLVLH*LMGKIG
Trigger: CCCTATCTTTCCCATCAGTCAGTGCAACACTAATGT...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR TCA 90 bp ACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATTTGTATAGTGTCTTTTaGTACACAGCCTGGACGGCA +
Preference number: 4 (lower is better)
Translates to: TPDASSYYNKMRKILLRHLYSVF*YTAWTA
Trigger: TGCCGTCCAGGCTGTGTATCAAAAGACACTATACAA...ATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR GCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGCACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATATCACTATCCTAGCTTaGATTAAGCATAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYITILA*IKHRLK
Trigger: TTTCAGCCTATGCTTAATGCAAGCTAGGATAGTGAT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCATTCTGAGTTATCAATaGAATGCTAACACATGCAGA +
Preference number: 4 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICILSYQ*NANTCR
Trigger: TCTGCATGTGTTAGCATTGCATTGATAACTCAGAAT...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTATATCTAGTAGGTACCTaGCAAATGGAGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILYLVGT*QMESCT
Trigger: TGTACAACTCTCCATTTGGCAGGTACCTACTAGATA...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTTGCCTGGAAGATGGGTaGTCTTCAATTCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDICLEDG*SSIQWH
Trigger: ATGCCACTGAATTGAAGACCACCCATCTTCCAGGCA...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp GATCTGTTCCCAAATCCTCATGTTTACAACGCAGGTTTTCCCTTGTATTTCCATGTAAGCACTGCCAAATaGAGAGTTGTACAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: DLFPNPHVYNAGFPLYFHVSTAK*RVVQFY
Trigger: GTAAAACTGTACAACTCTCCATTTGGCAGTGCTTAC...ATGGAAATACAAGGGAAAACCTGCGTTGTAAACATGAGGATTTGGGAACAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCGTGGAAAATCTAAGGTaGAGCCCACTCTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSVENLR*SPLFYA
Trigger: AGCATAGAAGAGTGGGCTCCACCTTAGATTTTCCAC...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
3UTR CAA 72 bp ACATCACTACTGCAAGGATATGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTTGTCCAGAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: TSLLQGYAIFGG*IRGSLVVQNCF
Trigger: AAAACAATTCTGGACAACTAAACTACCTCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
3UTR CAA 72 bp CACCACTGGGATATTCAGGACTACAAATTCAGAGAGTaGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTA +
Preference number: 4 (lower is better)
Translates to: HHWDIQDYKFRE*KALEFWDQKPV
Trigger: TACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAATATCCCAGTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGAAGAAACCCAGCAAATaGCTCCAGATGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQKKPSK*LQMFTV
Trigger: GACAGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATGCGTAAAATACTCCTaGGACATAGCAGCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRICVKYS*DIAAQY
Trigger: ATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCA...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCTTTGCCATTGCTGCGTaGGGTAATTGGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFFAIAA*GNWDES
Trigger: AGATTCATCCCAATTACCTCACGCAGCAATGGCAAA...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATAGTACAATCCCTTCTCTaGTTCACCGTGGAAGTGATT +
Preference number: 4 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRIVQSLL*FTVEVI
Trigger: AATCACTTCCACGGTGAATCAGAGAAGGGATTGTAC...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR TCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp TTTTCCTCAGCAGGAGGTACCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: FSSAGGTCLLFKSDRLLSSNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGA...GGACAACAGTCTATCACTCTTAAACAATAAACAGGTACCTCCTGCTGAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR TCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCGTGACAGACATTCCCTaGATCTTCGTTCCTGATTCT +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFVTDIP*IFVPDS
Trigger: AGAATCAGGAACGAAGATTCAGGGAATGTCTGTCAC...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR TCA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCGCATTAAGCATAGGCTaGAACAACACTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSALSIG*NNTCLD
Trigger: ATCAAGGCAAGTGTTGTTTCAGCCTATGCTTAATGC...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR TCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCACAAATTCAGAGAGTTaGAAGCTCTGGAATTTTGGG +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKITNSES*KLWNFG
Trigger: CCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGT...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGAACAAATTCAGAGAGTTaGAAGCTCTGGAATTTTGGG +
Preference number: 4 (lower is better)
Translates to: RVESSGILGSKTCNPLTRTNSES*KLWNFG
Trigger: CCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGT...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp GCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAACAAATTCAGAGAGTTaGAAGCTCTGGAATTTTGGG +
Preference number: 4 (lower is better)
Translates to: ASSYYNKMRKILLRHSSPTNSES*KLWNFG
Trigger: CCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGT...TGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR TCA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAGCTCATGTCAACTCATaGAGAAACTTGGGTAATATT +
Preference number: 4 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRAHVNS*RNLGNI
Trigger: AATATTACCCAAGTTTCTTCATGAGTTGACATGAGC...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000515853.5
CDS-3UTR TCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGTGGTCATTAAATGCTaGCTGACATACAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIVVIKC*LTYRSV
Trigger: AACACTTCTGTATGTCAGTCAGCATTTAATGACCAC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAGCACGACTTTTTCAGTaGGTCATAATTACTGATACT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTARLFQ*VIITDT
Trigger: AGTATCAGTAATTATGACTCACTGAAAAAGTCGTGC...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAAGTCCAATTATTGAGTTaGCAGTCTACTGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKVQLLS*QSTVRM
Trigger: CATTCTCACAGTAGACTGTCAACTCAATAATTGGAC...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACCACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATACACAATTACACGGGGTaGAAAGTCCTGTACAATAGG +
Preference number: 4 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRIHNYTG*KVLYNR
Trigger: CCTATTGTACAGGACTTTGCACCCCGTGTAATTGTG...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAATTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKLLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTTTTTCCTGCTTAAATaGCCTGCCTCACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSFFLLK*PASLSL
Trigger: AAGAGACAGTGAGGCAGGGCATTTAAGCAGGAAAAA...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCACCGCTCTGGGACTTTaGAAATGTAGAATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVTALGL*KCRIGK
Trigger: CTTTCCTATTCTACATTTCCAAAGTCCCAGAGCGGT...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGGAAAGTACCGCTCTaGGACTTTGGAAATGTAGAA +
Preference number: 4 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSWKVPL*DFGNVE
Trigger: TTCTACATTTCCAAAGTCCCAGAGCGGTACTTTCCA...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTGATATTCTGTCCAGGTaGGATGCCATAAGATGTGAC +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIDILSR*DAIRCD
Trigger: GTCACATCTTATGGCATCCCACCTGGACAGAATATC...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAGTAAGCACTGCCAAATaGAGAGTTGTACAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGVSTAK*RVVQFY
Trigger: GTAAAACTGTACAACTCTCCATTTGGCAGTGCTTAC...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CCA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTCTTGTTTGGTTATCTTaGATTGTGGTAACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: WFILGFGTSRKHCQMESCLVWLS*IVVTCS
Trigger: GCTGCAAGTTACCACAATCCAAGATAACCAAACAAG...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CCA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CCA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGATTCTTTACACACTTaGGCAGAAGTAGAATTCCCA +
Preference number: 4 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIDSLHT*AEVEFP
Trigger: TGGGAATTCTACTTCTGCCCAAGTGTGTAAAGAATC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTAAGAAACCCAGCAAATaGCTCCAGATGTTTACTGTC +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDIKKPSK*LQMFTV
Trigger: GACAGTAAACATCTGGAGTCATTTGCTGGGTTTCTT...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR TCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTAATATTGCTTAACAACTaGATTCACCAGGTGGCCATA +
Preference number: 4 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVILLNN*IHQVAI
Trigger: TATGGCCACCTGGTGAATTCAGTTGTTAAGCAATAT...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTGCATTAAGCATAGGCTaGAACAACACTTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIALSIG*NNTCLD
Trigger: ATCAAGGCAAGTGTTGTTTCAGCCTATGCTTAATGC...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAGGACCAGAGCACAGGTaGATAAGATTATTATCAAAT +
Preference number: 4 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGGPEHR*IRLLSN
Trigger: ATTTGATAATAATCTTATTCACCTGTGCTCTGGTCC...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGGAAATTCTCTTTGCTaGGATACTATACTAGCATGG +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQGNSLC*DTILAW
Trigger: CCATGCTAGTATAGTATCTCAGCAAAGAGAATTTCC...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTGTGGTCATTAAATGCTaGCTGACATACAGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSVVIKC*LTYRSV
Trigger: AACACTTCTGTATGTCAGTCAGCATTTAATGACCAC...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATAGATGGTTGTCACAATTaGGATTATGTGCAGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRIDGCHN*DYVQVR
Trigger: CCTAACCTGCACATAATCTCAATTGTGACAACCATC...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTAACTACTGCAAGGATATaGCATATTTGGTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVTTARI*HIWWLD
Trigger: ATCAAGCCACCAAATATGGCATATCCTTGCAGTAGT...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGACTACTGCAAGGATATaGCATATTTGGTGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQTTARI*HIWWLD
Trigger: ATCAAGCCACCAAATATGGCATATCCTTGCAGTAGT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCTTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVLLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR GCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTTTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSLLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGAATCACTATCCTAGCTTaGATTAAGCATAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: RVESSGILGSKTCNPLTRITILA*IKHRLK
Trigger: TTTCAGCCTATGCTTAATGCAAGCTAGGATAGTGAT...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAGCAAACAGCTTTAAGTaGACTTTCTTTGATTACACT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTANSFK*TFFDYT
Trigger: AGTGTAATCAAAGAAAGTGCACTTAAAGCTGTTTGC...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTATTACAAAATCTTCTCTaGACGCACTTGCTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVLQNLL*THLLKV
Trigger: TACCTTCAGCAAGTGCGTCCAGAGAAGATTTTGTAA...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTGGTCTTCAATTCAGTaGCATGTCCTAGATCTGTTC +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIWSSIQ*HVLDLF
Trigger: GAACAGATCTAGGACATGCCACTGAATTGAAGACCA...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCGGCTCTATTATGGGATaGTTCAATTCTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSGSIMG*FNSGLR
Trigger: CCTTAAACCAGAATTGAACCATCCCATAATAGAGCC...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACACACTCAATAAAAGTTTaGCTCTATTATGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: QRVESSGILGSKTCNPLTHSIKV*LYYGMV
Trigger: AACCATCCCATAATAGAGCCAAACTTTTATTGAGTG...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTGATTGTATTAGTCCTTaGTCTCTGCTAGACCTCATG +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIDCISP*SLLDLM
Trigger: CATGAGGTCTAGCAGAGACCAAGGACTAATACAATC...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CAA 72 bp GGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAATCCACTCACAAGAATT +
Preference number: 4 (lower is better)
Translates to: GLQIQRVESSGI*GSKTCNPLTRI
Trigger: AATTCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDIYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR TCA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTATGTCTGTACTGCATaGCATACACTGTTGACTGAT +
Preference number: 4 (lower is better)
Translates to: NFPYRKTCTPFKFKETRIYVCTA*HTLLTD
Trigger: ATCAGTCAACAGTGTATGTCATGCAGTACAGACATA...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACCCTAATTCACAAATGTaGAACATAGTCAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNPNSQM*NIVRTR
Trigger: CCTTGTCCTGACTATGTTTCACATTTGTGAATTAGG...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGCTCATGTCAACTCATaGAGAAACTTGGGTAATATT +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQAHVNS*RNLGNI
Trigger: AATATTACCCAAGTTTCTTCATGAGTTGACATGAGC...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTATGTCATGCAGCTTACTaGATTGCAGTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVCHAAY*IAVSVI
Trigger: TATTACACTAACTGCAATTCAGTAAGCTGCATGACA...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCTCAGAAAAGAGGCTATaGCACATTAAAGAGAAAACC +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVSEKRL*HIKEKT
Trigger: GGTTTTCTCTTTAATGTGTCATAGCCTCTTTTCTGA...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp TCCGGATTTGCAAATAGACACAACTTTCAGTCTTACCCTGTTTATTGTTTAAGAGTGAGTCATAATTACTaGTACTCGAGTGATGACAGT +
Preference number: 4 (lower is better)
Translates to: SGFANRHNFQSYPVYCLRVSHNY*YSSDDS
Trigger: ACTGTCATCACTCGAGTATCAGTAATTATGACTCAC...TCTTAAACAATAAACAGGGTAAGACTGAAAGTTGTGTCTATTTGCAAATCCGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCACTGAATTCTGTCCCTaGTTCACTGTTTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSTEFCP*FTVLFE
Trigger: TTCAAACAAAACAGTGAATCAGGGACAGAATTCAGT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR TCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGCTTATTCTTTTTGACTaGATTCTGTCCCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQLILFD*ILSLIH
Trigger: GTGAATCAGGGACAGAATTCAGTCAAAAAGAATAAG...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR GCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTTTGCTATGTCTGTACTaGATGACATACACTGTTGAC +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDILLCLY*MTYTVD
Trigger: GTCAACAGTGTATGTCATGCAGTACAGACATAGCAA...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CCA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGTTTGGCTCTATTATaGGATGGTTCAATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SCTVLRKSITIFKSDILSSLALL*DGSILV
Trigger: AACCAGAATTGAACCATCCCATAATAGAGCCAAACT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGTTAACTCCTGCCAAATaGAGAGTTGTACAGTTTTAC +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQLTPAK*RVVQFY
Trigger: GTAAAACTGTACAACTCTCCATTTGGCAGGAGTTAA...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR CCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCACCTTTATACCAGGTTaGTTCTGTTCAGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFTFIPG*FCSALF
Trigger: AAACAGTGCTGAACAGAACCAACCTGGTATAAAGGT...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR TCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACGGACCAGAGCACAGGTaGATAAGATTATTATCAAAT +
Preference number: 4 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNGPEHR*IRLLSN
Trigger: ATTTGATAATAATCTTATTCACCTGTGCTCTGGTCC...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR TCA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCTGTCATGCAGCTTACTaGATTGCAGTTAGTGTAATA +
Preference number: 4 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFCHAAY*IAVSVI
Trigger: TATTACACTAACTGCAATTCAGTAAGCTGCATGACA...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR GCA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACATCACTATCCTAGCTTaGATTAAGCATAGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNITILA*IKHRLK
Trigger: TTTCAGCCTATGCTTAATGCAAGCTAGGATAGTGAT...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTATTCTGAGTTATCAATaGAATGCTAACACATGCAGA +
Preference number: 4 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSILSYQ*NANTCR
Trigger: TCTGCATGTGTTAGCATTGCATTGATAACTCAGAAT...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR GCA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCGAGGTGTACACAATATaGTTCTTGATTGTATTAGTC +
Preference number: 4 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVEVYTI*FLIVLV
Trigger: GACTAATACAATCAAGAAGCATATTGTGTACACCTC...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CCA 90 bp ACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAAGATTATTATCAAATaGGGCATCTGCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: TPDASSYYNKMRKILLRHKIIIK*GICMTL
Trigger: CAAAGTCATGCAGATGCCCCATTTGATAATAATCTT...ATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR CCA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTGATACAGGATTCAATTaGGGGTTCAATAGGATAGAA +
Preference number: 4 (lower is better)
Translates to: MESCTVLRKSITIFKSDIDTGFN*GFNRIE
Trigger: TTCTATCCTATTGAACCCCCAATTGAATCCTGTATC...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
3UTR CAA 72 bp AAAGTATTATCTAGTAGGTACCTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTCAATCACAATCTTCAA +
Preference number: 4 (lower is better)
Translates to: KVLSSRYLPNGE*YSFTEVNHNLQ
Trigger: TTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGCAGGTACCTACTAGATAATACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS GCA 90 bp CGGAGCCCGCGGACGCTGCGCGAGGTCCTACCGCGCTGCCGCTGCTaGCCAGGGCCCGGCTCTGCGCTCACACCGGCCACTGCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: RSPRTLREVLPRCRC*PGPGSALTPATAAS
Trigger: GCTGGCGGCAGTGGCCGGTGTGAGCGCAGAGCCGGGCCCTGGGCAGCAGCGGCAGCGCGGTAGGACCTCGCGCAGCGTCCGCGGGCTCCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS GCA 90 bp ACAGGCGGATGCCACGGGGCACCAGGACCGGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCGCGCTCTTCAGCAGCTTCTGATGCA +
Preference number: 5 (lower is better)
Translates to: TGGCHGAPGPASTGS*PARCNARSSAASDA
Trigger: TGCATCAGAAGCTGCTGAAGAGCGCGCATTACATCGAGCTGGGCAGCTACCAGTACTGGCCGGTCCTGGTGCCCCGTGGCATCCGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000508599.1
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CCTGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGATGTACGGGTTGTCCTaGAGGGACCCGGGGATCTGC +
Preference number: 5 (lower is better)
Translates to: PASLSLLHTYEWLDLYTRMYGLS*RDPGIC
Trigger: GCAGATCCCCGGGTCCCTCAAGGACAACCCGTACAT...CCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CAA 90 bp CTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCTGTTCATCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: LFCTPTSGLTFIPGWFCSSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...TGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CAA 90 bp ATTGTTTTCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTTCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: IVFCNSGPAWKMGGLQFSSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...ACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGAAAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp AAACCGAGGACCAGAGCACAGGTGAATAAGATTATTATCAAATGGGGCATCTGCTCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: KPRTRAQVNKIIIKWGICSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...GCAGATGCCCCATTTGATAATAATCTTATTCACCTGTGCTCTGGTCCTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp TTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATCCTCATGTTTACAACGCTCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: FNSVACPRSVPKSSCLQRSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...GCGTTGTAAACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp CTGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTACACCTACGAGTGGCTaGACCTTTATACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LPHCLFCTPTSGLTFIPGTPTSG*TFIPGW
Trigger: CCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGT...ACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATATGTACGGGTTGTCCTaGAGGGACCCGGGGATCTGC +
Preference number: 5 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYMYGLS*RDPGIC
Trigger: GCAGATCCCCGGGTCCCTCAAGGACAACCCGTACAT...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGCCTGAGGAGAGCCTGTaGGACCCCTTCGGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRPEESL*DPFGAK
Trigger: CTTGGCACCGAAGGGGTCCAACAGGCTCTCCTCAGG...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511594.5
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATGTACGGGTTGTCCTaGAGGGACCCGGGGATCTGC +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRMYGLS*RDPGIC
Trigger: GCAGATCCCCGGGTCCCTCAAGGACAACCCGTACAT...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS CCA 90 bp CTGCTTAAATGCCCTGCCTCACTGTCTCTTCTGCACACCTACGAGTaGCTTGACCTTTATACCAGGTTGGTTCTGTTCAGCACTGTTTTA +
Preference number: 5 (lower is better)
Translates to: LLKCPASLSLLHTYE*LDLYTRLVLFSTVL
Trigger: TAAAACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGGGCATTTAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CAA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAATGTACGGGTTGTCCTaGAGGGACCCGGGGATCTGC +
Preference number: 5 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGMYGLS*RDPGIC
Trigger: GCAGATCCCCGGGTCCCTCAAGGACAACCCGTACAT...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCTCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTCTTCTCTGGACGCACTaGCTGAAGGTAACACAGATG +
Preference number: 5 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRLLWTH*LKVTQM
Trigger: CATCTGTGTTACCTTCAGCAAGTGCGTCCAGAGAAG...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR CAA 90 bp AGCTCAGTGGTGAAAAACCAAGTACACAAAGGAATGCCTGAGGATCTGTGGGATAGGTTTTGGAGACTGTaGTTCACTCCACCCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SSVVKNQVHKGMPEDLWDRFWRL*FTPPSV
Trigger: GACACTGGGTGGAGTGAACAACAGTCTCCAAAACCT...ATCCCACAGATCCTCAGGCATTCCTTTGTGTACTTGGTTTTTCACCACTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTGATCTGTGGGATGGATaGTTTAGGCCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRDLWDG*FRPGFL
Trigger: GAGAAACCCTGGCCTAAACAATCCATCCCACAGATC...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: SVILALPGRWVVFNSVACAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp TCTAGATTCTATGGCCTTGCAAGTAGCACCCACAATGCTGGGAACCCCCACCACAGTCAGCTACTCTGCTaGGTTTATTTTAGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: SRFYGLASSTHNAGNPHHSQLLC*VYFRFW
Trigger: CCAAAACCTAAAATAAACCAAGCAGAGTAGCTGACT...GTGGTGGGGGTTCCCAGCATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp TCTGTAATTCTGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTAAGAGTGATAGACTGTaGTCCTCTTGCTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SVILALPGRWVVFNSVACKSDRL*SSCWWK
Trigger: TTTCCACCAGCAAGAGGACAACAGTCTATCACTCTT...ACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCAGAATTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS CCA 90 bp ACCGTGGAAGTGATTTTAGCCCACGTAACTAGAAAGTGGTTGATGTaGGTCTTGAACCCAAGCAGTCTGACTCCAGAGCTAAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: TVEVILAHVTRKWLM*VLNPSSLTPELKFS
Trigger: TGAGAACTTTAGCTCTGGAGTCAGACTGCTTGGGTTCAAGACCCACATCAACCACTTTCTAGTTACGTGGGCTAAAATCACTTCCACGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGATGTACGGGTTGTCCTaGAGGGACCCGGGGATCTGC +
Preference number: 5 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQMYGLS*RDPGIC
Trigger: GCAGATCCCCGGGTCCCTCAAGGACAACCCGTACAT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp TCCGGATTTGCAAATAGACACAACTTTCAGTCTTACCCTGTTTATTGTTTAAGATCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: SGFANRHNFQSYPVYCLRSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...TCTTAAACAATAAACAGGGTAAGACTGAAAGTTGTGTCTATTTGCAAATCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp AGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATAGCAGCCCAGTATTCTCGGTGATGTACGGGTaGTCCTTGAGGGACCCGGGG +
Preference number: 5 (lower is better)
Translates to: SYYNKMRKILLRHSSPVFSVMYG*SLRDPG
Trigger: CCCCGGGTCCCTCAAGGACAACCCGTACATCACCGA...GAATACTGGGCTGCTATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508599.1
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: HQYNITTARICHIWWLDPDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...CGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp TGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTTAGTTGTCCAGAATaGTTTTCTGTAATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: WPCLEDGWSSIQWHVLDLFSCPE*FSVILA
Trigger: GGCCAGAATTACAGAAAACAATTCTGGACAACTAAA...CAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp GATGATAGAACGGAGCCTTTGCCATTGCTGCGTGAGGTAATTGGGATGAATCTGAAGAGTGATAGACTGTaGTCCTCTTGCTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: DDRTEPLPLLREVIGMNLKSDRL*SSCWWK
Trigger: TTTCCACCAGCAAGAGGACAACAGTCTATCACTCTT...CAGATTCATCCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR CAA 90 bp CTCACCCTTTCTTCTTTCCCAACACACGTGACGAGTGGTACAATCCCTTCTCTGCGTTTCATCTTATTTTaGCAGATAGGCTCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LTLSSFPTHVTSGTIPSLRFILF*QIGSRR
Trigger: TCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACG...CAGAGAAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAGAAGAAAGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp TGGCCCTGCCTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGACTACTCAGTGTCTTTaGTTTGGCCAAAATGACAAA +
Preference number: 5 (lower is better)
Translates to: WPCLEDGWSSIQWHVLDLTTQCL*FGQNDK
Trigger: TTTGTCATTTTGGCCAAACAAAAGACACTGAGTAGT...CAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAGGCAGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CAA 90 bp CTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTGGTTCTGTTCAGACCTTTATACCAGGTaGGTTCTGTTCAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: LFCTPTSGLTFIPGWFCSDLYTR*VLFSTV
Trigger: AACAGTGCTGAACAGAACCAACCTGGTATAAAGGTC...TGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS-3UTR CAA 90 bp CTCACCCTTTCTTCTTTCCCAACACACGTGACGAGTGGTACAATCCCTTCTCTGAAAATAAACAAACTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: LTLSSFPTHVTSGTIPSLKINKL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGTTTGTTTATTTT...CAGAGAAGGGATTGTACCACTCGTCACGTGTGTTGGGAAAGAAGAAAGGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: WFILGFGTSRKHCQMESCTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CAA 90 bp ACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCTTGATCCGAGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: TNITSLLQGYAIFGGLIRDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...TCGGATCAAGCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp ATTCTGTCCAGGTGGGATGCCATAAGATGTGACAGACATTCCCTGAATCTTCGTGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: ILSRWDAIRCDRHSLNLRAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...ACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCAAGCATACAGACCTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: TDATNITSLLQGYAIFGGKHTDL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGGTCTGTATGCTT...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACACTTCTCTGGACGCACTaGCTGAAGGTAACACAGATG +
Preference number: 5 (lower is better)
Translates to: QRVESSGILGSKTCNPLTLLWTH*LKVTQM
Trigger: CATCTGTGTTACCTTCAGCAAGTGCGTCCAGAGAAG...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395594.2
ENST00000512733.5
CDS-3UTR CAA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp ACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCTGAGACATACGGAGCCTTTGCCATaGCTGCGTGAGGTAATTGGG +
Preference number: 5 (lower is better)
Translates to: TPDASSYYNKMRKILLRHTEPLP*LREVIG
Trigger: CCCAATTACCTCACGCAGCAATGGCAAAGGCTCCGT...ATGTCTCAGGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTATGGTTGATGTGGGTCTaGAACCCAAGCAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILWLMWV*NPSSLT
Trigger: AGTCAGACTGCTTGGGTTCAAGACCCACATCAACCA...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp TTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATCCTCATGTTTACAACGCCTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 5 (lower is better)
Translates to: FNSVACPRSVPKSSCLQRLDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...GCGTTGTAAACATGAGGATTTGGGAACAGATCTAGGACATGCCACTGAATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS TCA 90 bp TTCTGTACAATAGGAGCACCAATTCCTCCATTGAGCCAAACCCAGTaGAGAGTAGGAATCACTCCATATCCCGAAACAGAACAAAAGATG +
Preference number: 5 (lower is better)
Translates to: FCTIGAPIPPLSQTQ*RVGITPYPETEQKM
Trigger: CATCTTTTGTTCTGTTTCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATTGGTGCTCCTATTGTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515541.1
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp GATCAAGTACACCTGACGCCAGTAGTTATTACAATAAAATGCGTAAAATACTCCGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: DQVHLTPVVITIKCVKYSDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...GGAGTATTTTACGCATTTTATTGTAATAACTACTGGCGTCAGGTGTACTTGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512760.5
ENST00000515853.5
CDS-3UTR CAA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCGATCTGTGGGATGGATaGTTTAGGCCAGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ANKGCSRRNISYYCCTKIDLWDG*FRPGFL
Trigger: GAGAAACCCTGGCCTAAACAATCCATCCCACAGATC...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CTGGAAGATGGGTGGTCTTCAATTCAGTGGCATGTCCTAGATCTGTTCCCAAATAGTCAGCTACTCTGCTaGGTTTATTTTAGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: LEDGWSSIQWHVLDLFPNSQLLC*VYFRFW
Trigger: CCAAAACCTAAAATAAACCAAGCAGAGTAGCTGACT...ATTTGGGAACAGATCTAGGACATGCCACTGAATTGAAGACCACCCATCTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp CCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTTAAAAACGATAGAACGGAGCCTTaGCCATTGCTGCGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: PTERPVHPLNSKKHGFKNDRTEP*PLLREV
Trigger: TACCTCACGCAGCAATGGCAAAGGCTCCGTTCTATC...GTTTTTAAATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp GATCTGTTCCCAAATCCTCATGTTTACAACGCAGGTTTTCCCTTGTATTTCCATCTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTC +
Preference number: 5 (lower is better)
Translates to: DLFPNPHVYNAGFPLYFHLPNGE*YSFTEV
Trigger: GACTTCCGTAAAACTGTACAACTCTCCATTTGGCAG...ATGGAAATACAAGGGAAAACCTGCGTTGTAAACATGAGGATTTGGGAACAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp AATTCCTCCATTGAGCCAAACCCAGTGAAGAGTAGGAATCACTCCATATCCCGAGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: NSSIEPNPVKSRNHSISRESSGI*GSKTCN
Trigger: ATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTC...TCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR CAA 90 bp AATTCCTCCATTGAGCCAAACCCAGTGAAGAGTAGGAATCACTCCATATCCCGATACAAATTCAGAGAGTaGAAAGCTCTGGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: NSSIEPNPVKSRNHSISRYKFRE*KALEFW
Trigger: CCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTA...TCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR CAA 90 bp AATTCCTCCATTGAGCCAAACCCAGTGAAGAGTAGGAATCACTCCATATCCCGAACTACTCAGTGTCTTTaGTTTGGCCAAAATGACAAA +
Preference number: 5 (lower is better)
Translates to: NSSIEPNPVKSRNHSISRTTQCL*FGQNDK
Trigger: TTTGTCATTTTGGCCAAACAAAAGACACTGAGTAGT...TCGGGATATGGAGTGATTCCTACTCTTCACTGGGTTTGGCTCAATGGAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR CAA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGAAGCATACAGACCTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQKHTDL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGGTCTGTATGCTT...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGCAGGACTAGAACCTaGGTGGCTGTTCATTTCAGC +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSSRTRT*VAVHFS
Trigger: GCTGAAATGAACAGCCACCAAGGTTCTAGTCCTGCT...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp TCACCAGGCAGAGCAGTTTTCTTACAAGTCAGCTACTCTGCTTGGTTTATTTTACAAAAACTGGAGTCTTaGGTAGCCTGTGGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: SPGRAVFLQVSYSAWFILQKLES*VACGKV
Trigger: AACCTTTCCACAGGCTACCAAAGACTCCAGTTTTTG...TAAAATAAACCAAGCAGAGTAGCTGACTTGTAAGAAAACTGCTCTGCCTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCAAAATAAACAAACTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: TDATNITSLLQGYAIFGGKINKL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGTTTGTTTATTTT...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000395594.2
CDS-3UTR CAA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATACTTCTCTGGACGCACTaGCTGAAGGTAACACAGATG +
Preference number: 5 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRILLWTH*LKVTQM
Trigger: CATCTGTGTTACCTTCAGCAAGTGCGTCCAGAGAAG...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR CAA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAGCCATATTTGGTGGCTaGATCCGAGGTAGTTTAGTT +
Preference number: 5 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGAIFGG*IRGSLV
Trigger: AACTAAACTACCTCGGATCAAGCCACCAAATATGGC...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGACTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGLPNGE*YSFTEV
Trigger: GACTTCCGTAAAACTGTACAACTCTCCATTTGGCAG...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp TGTAACATCATCACTTGGATTGTGGTAACTTGCAGCCTGGAACCTAACTTTTCCGGAGGTACCTGTTTATaGTTTAAGAGTGATAGACTG +
Preference number: 5 (lower is better)
Translates to: CNIITWIVVTCSLEPNFSGGTCL*FKSDRL
Trigger: CAGTCTATCACTCTTAAACAATAAACAGGTACCTCC...GGAAAAGTTAGGTTCCAGGCTGCAAGTTACCACAATCCAAGTGATGATGTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512760.5
CDS-3UTR CAA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 5 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVLDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp AAACAGCCATTTTCAAAGCAGCCTTCCATCATAACGATGGGTAAGACACGGTATTGCACAAAAGGCATTTaGGGAATAAGCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: KQPFSKQPSIITMGKTRYCTKGI*GISFII
Trigger: GATGATGAAGCTTATTCCCAAAATGCCTTTTGTGCA...ATACCGTGTCTTACCCATCGTTATGATGGAAGGCTGCTTTGAAAATGGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CACTCCATATCCCGAAACAGAACAAAAGATGATAGAACGGAGCCTTTGCCATTGAAGACAAGCACTGTCTaGCTATTTGAAAATGGCTTA +
Preference number: 5 (lower is better)
Translates to: HSISRNRTKDDRTEPLPLKTSTV*LFENGL
Trigger: TAAGCCATTTTCAAATAGCAAGACAGTGCTTGTCTT...CAATGGCAAAGGCTCCGTTCTATCATCTTTTGTTCTGTTTCGGGATATGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515853.5
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAAAATAAACAAACTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRKINKL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGTTTGTTTATTTT...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCCTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSLPNGE*YSFTEV
Trigger: GACTTCCGTAAAACTGTACAACTCTCCATTTGGCAG...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGACTTGTTTGGTTATCTaGGATTGTGGTAACTTGCAG +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRTCLVI*DCGNLQ
Trigger: CTGCAAGTTACCACAATCCAAGATAACCAAACAAGT...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp ACTGATGCCACCAATATAACATCACTACTGCAAGGATATGCCATATTTGGTGGCAACATTCAGACTTGTTaGGTTATCTTGGATTGTGGT +
Preference number: 5 (lower is better)
Translates to: TDATNITSLLQGYAIFGGNIQTC*VILDCG
Trigger: ACCACAATCCAAGATAACCAAACAAGTCTGAATGTT...GCCACCAAATATGGCATATCCTTGCAGTAGTGATGTTATATTGGTGGCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS-3UTR CAA 90 bp ATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACTAGATTCTATGGCCTaGCAAGTAGCACCCACAATG +
Preference number: 5 (lower is better)
Translates to: IQDYKFRELKALEFWDQKLDSMA*QVAPTM
Trigger: CATTGTGGGTGCTACTTGCAAGGCCATAGAATCTAG...TTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp CAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACATGCACAAAAGGCATTTaGGGAATAAGCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: QRVESSGILGSKTCNPLTCTKGI*GISFII
Trigger: GATGATGAAGCTTATTCCCAAAATGCCTTTTGTGCA...TGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATACTGCCAAATGGAGAGTaGTACAGTTTTACGGAAGTC +
Preference number: 5 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRILPNGE*YSFTEV
Trigger: GACTTCCGTAAAACTGTACAACTCTCCATTTGGCAG...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATAAAGAGTGATAGACTGTaGTCCTCTTGCTGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRIKSDRL*SSCWWK
Trigger: TTTCCACCAGCAAGAGGACAACAGTCTATCACTCTT...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp CCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGACTCCAGAAGATCCTTTaGGTTCTGTTCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: PNGELYSFTEVNHNLQIGLQKIL*VLFLSF
Trigger: AAATGAAAGGAACAGAACCAAAAGGATCTTCTGGAG...TCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CAA 90 bp TGGTTTATTTTAGGTTTTGGTACTTCACGTAAGCACTGCCAAATGGAGAGTTGTCTCCAGAAGATCCTTTaGGTTCTGTTCCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: WFILGFGTSRKHCQMESCLQKIL*VLFLSF
Trigger: AAATGAAAGGAACAGAACCAAAAGGATCTTCTGGAG...ACAACTCTCCATTTGGCAGTGCTTACGTGAAGTACCAAAACCTAAAATAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CAA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGCGTTTCATCTTATTTTaGCAGATAGGCTCGAGGAGA +
Preference number: 5 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQRFILF*QIGSRR
Trigger: TCTCCTCGAGCCTATCTGCAAAAATAAGATGAAACG...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CAA 90 bp GCCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTGCACAAAAGGCATTTaGGGAATAAGCTTCATCATC +
Preference number: 5 (lower is better)
Translates to: ANKGCSRRNISYYCCTKICTKGI*GISFII
Trigger: GATGATGAAGCTTATTCCCAAAATGCCTTTTGTGCA...GATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp GATCTGTTCCCAAATCCTCATGTTTACAACGCAGGTTTTCCCTTGTATTTCCATAAGACAAGCACTGTCTaGCTATTTGAAAATGGCTTA +
Preference number: 5 (lower is better)
Translates to: DLFPNPHVYNAGFPLYFHKTSTV*LFENGL
Trigger: TAAGCCATTTTCAAATAGCAAGACAGTGCTTGTCTT...ATGGAAATACAAGGGAAAACCTGCGTTGTAAACATGAGGATTTGGGAACAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CAA 90 bp GCCAAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGAAGACAAGCACTGTCTaGCTATTTGAAAATGGCTTA +
Preference number: 5 (lower is better)
Translates to: AKWRVVQFYGSQSQSSNRKTSTV*LFENGL
Trigger: TAAGCCATTTTCAAATAGCAAGACAGTGCTTGTCTT...CCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp CTAGAACATTTATTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTAAATAGGCTTTGCCCCTaGACATTTAATACAGGGCAA +
Preference number: 5 (lower is better)
Translates to: LEHLFRSVIIFPYPNPCVNRLCP*TFNTGQ
Trigger: TTGCCCTGTATTAAATGTCAAGGGGCAAAGCCTATT...TACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATAAATGTTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp AGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAACCTGTAATCCACTCACAAGACGACATTATCCGGATTaGCAAATAGACACAACTTTC +
Preference number: 5 (lower is better)
Translates to: RVESSGILGSKTCNPLTRRHYPD*QIDTTF
Trigger: GAAAGTTGTGTCTATTTGCAAATCCGGATAATGTCG...TCTTGTGAGTGGATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTCAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCAGTCAGCTACTCTGCTaGGTTTATTTTAGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVSQLLC*VYFRFW
Trigger: CCAAAACCTAAAATAAACCAAGCAGAGTAGCTGACT...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000512733.5
ENST00000512760.5
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCGGAGGTACCTGTTTATaGTTTAAGAGTGATAGACTG +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSGGTCL*FKSDRL
Trigger: CAGTCTATCACTCTTAAACAATAAACAGGTACCTCC...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342820.10
ENST00000512760.5
CDS-3UTR CAA 90 bp AGGTTAATTTTTCACAAGAAACCCCCTACTGCTATTTACCTCTCCCTTCCAAAAGTCTTACCCTGTTTATaGTTTAAGAGTGATAGACTG +
Preference number: 5 (lower is better)
Translates to: RLIFHKKPPTAIYLSLPKVLPCL*FKSDRL
Trigger: CAGTCTATCACTCTTAAACAATAAACAGGGTAAGAC...TTTTGGAAGGGAGAGGTAAATAGCAGTAGGGGGTTTCTTGTGAAAAATTAACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp TTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCAGGGTCCAATTATTGAGTaGACAGTCTACTGTGAGAAT +
Preference number: 5 (lower is better)
Translates to: LYSFTEVNHNLQIGYSVQGPIIE*TVYCEN
Trigger: ATTCTCACAGTAGACTGTCAACTCAATAATTGGACC...CTGGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTAAAATAAACAAACTTTaGATACACAGCCTGGACGGC +
Preference number: 5 (lower is better)
Translates to: MESCTVLRKSITIFKSDIKINKL*IHSLDG
Trigger: GCCGTCCAGGCTGTGTATCAAAAGTTTGTTTATTTT...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000511594.5
ENST00000512733.5
CDS-3UTR CAA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSESSGI*GSKTCN
Trigger: ATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTC...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp GAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCGAAAGCTCTGGAATTTaGGGATCAAAAACCTGTAAT +
Preference number: 5 (lower is better)
Translates to: ELYSFTEVNHNLQIGYSVESSGI*GSKTCN
Trigger: ATTACAGGTTTTTGATCCCAAAATTCCAGAGCTTTC...GACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp AGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTGTCCTACAAATTCAGAGAGTaGAAAGCTCTGGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: SCTVLRKSITIFKSDILSYKFRE*KALEFW
Trigger: CCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTA...GGACAGAATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp CCAATAAGGGATGTTCTAGGAGAAATATATCCTACTACTGTTGCACCAAAATCTAAGCTAGCAAAAATCTaGAGGCCAAAGTTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PIRDVLGEIYPTTVAPKSKLAKI*RPKLFL
Trigger: AAGAAACAACTTTGGCCTCAAGATTTTTGCTAGCTT...AGATTTTGGTGCAACAGTAGTAGGATATATTTCTCCTAGAACATCCCTTATTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp ATTCAGGACTACAAATTCAGAGAGTTGAAAGCTCTGGAATTTTGGGATCAAAAATTTAGTTGTCCAGAATaGTTTTCTGTAATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: IQDYKFRELKALEFWDQKFSCPE*FSVILA
Trigger: GGCCAGAATTACAGAAAACAATTCTGGACAACTAAA...TTTTTGATCCCAAAATTCCAGAGCTTTCAACTCTCTGAATTTGTAGTCCTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395594.2
CDS-3UTR CAA 90 bp AATTTTCCCTACAGAAAGACCTGTACACCCTTTAAATTCAAAGAAACACGGATTACTACTCAGTGTCTTTaGTTTGGCCAAAATGACAAA +
Preference number: 5 (lower is better)
Translates to: NFPYRKTCTPFKFKETRITTQCL*FGQNDK
Trigger: TTTGTCATTTTGGCCAAACAAAAGACACTGAGTAGT...AATCCGTGTTTCTTTGAATTTAAAGGGTGTACAGGTCTTTCTGTAGGGAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395594.2
ENST00000512733.5
ENST00000515853.5
CDS-3UTR CAA 90 bp ATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTCTAGTTTTGAGGCGCTaGGGTACATTTGTTTTTAAT +
Preference number: 5 (lower is better)
Translates to: MESCTVLRKSITIFKSDILVLRR*GTFVFN
Trigger: ATTAAAAACAAATGTACCCAAGCGCCTCAAAACTAG...AATATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS-3UTR CAA 90 bp AAATGGAGAGTTGTACAGTTTTACGGAAGTCAATCACAATCTTCAAATCGGATATTAATATCACTAGTTTaGAGGCGCTTGGGTACATTT +
Preference number: 5 (lower is better)
Translates to: KWRVVQFYGSQSQSSNRILISLV*RRLGTF
Trigger: AAATGTACCCAAGCGCCTCAAAACTAGTGATATTAA...TATCCGATTTGAAGATTGTGATTGACTTCCGTAAAACTGTACAACTCTCCATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512733.5
CDS GCA 72 bp CGGACGCTGCGCGAGGTCCTACCGCGCTGCCGCTGCTaGCCAGGGCCCGGCTCTGCGCTCACACCGGCCACT +
Preference number: 6 (lower is better)
Translates to: RTLREVLPRCRC*PGPGSALTPAT
Trigger: AGTGGCCGGTGTGAGCGCAGAGCCGGGCCCTGGGCAGCAGCGGCAGCGCGGTAGGACCTCGCGCAGCGTCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000512733.5
CDS GCA 72 bp GGGACCCGGGGATCTGCTCGTAGGTGTACAGGCGGATaGCACGGGGCACCAGGACCGGCCAGTACTGGTAGC +
Preference number: 6 (lower is better)
Translates to: GTRGSARRCTGG*HGAPGPASTGS
Trigger: GCTACCAGTACTGGCCGGTCCTGGTGCCCCGTGGCATCCGCCTGTACACCTACGAGCAGATCCCCGGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000508599.1
ENST00000511594.5
ENST00000512299.5
ENST00000512733.5
ENST00000512760.5
ENST00000515853.5
CDS GCA 72 bp TGCCACGGGGCACCAGGACCGGCCAGTACTGGTAGCTaGCCAGCTCGATGTAATGCGCGCTCTTCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: CHGAPGPASTGS*PARCNARSSAA
Trigger: AGCTGCTGAAGAGCGCGCATTACATCGAGCTGGGCAGCTACCAGTACTGGCCGGTCCTGGTGCCCCGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342820.10
ENST00000395594.2
ENST00000508599.1
ENST00000511594.5
ENST00000512733.5
ENST00000512760.5
ENST00000515853.5
CDS TCA 72 bp CAGCACTGTTTTACCGATGCCTTGTATAGTGTCTTTTaGTACACAGCCTGGACGGCAGGTAGGCCCGGTAGC +
Preference number: 6 (lower is better)
Translates to: QHCFTDALYSVF*YTAWTAGRPGS
Trigger: GCTACCGGGCCTACCTGCCGTCCAGGCTGTGTATCAAAAGACACTATACAAGGCATCGGTAAAACAGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS CAA 72 bp CTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTaGGTTCTGTTCAGCACTGTTTTACCGATGCCTTGT +
Preference number: 6 (lower is better)
Translates to: LHTYEWLDLYTR*VLFSTVLPMPC
Trigger: ACAAGGCATCGGTAAAACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS CAA 90 bp TTAAATGCCCTGCCTCACTGTCTCTTCTGCACACCTACGAGTGGCTaGACCTTTATACCAGGTTGGTTCTGTTCAGCACTGTTTTACCGA +
Preference number: 6 (lower is better)
Translates to: LNALPHCLFCTPTSG*TFIPGWFCSALFYR
Trigger: TCGGTAAAACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAGTGAGGCAGGGCATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS CAA 90 bp CTGTCTCTTCTGCACACCTACGAGTGGCTTGACCTTTATACCAGGTaGGTTCTGTTCAGCACTGTTTTACCGATGCCTTGTATAGTGTCT +
Preference number: 6 (lower is better)
Translates to: LSLLHTYEWLDLYTR*VLFSTVLPMPCIVS
Trigger: AGACACTATACAAGGCATCGGTAAAACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCAGAAGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS CCA 72 bp TGCACACCTACGAGTGGCTTGACCTTTATACCAGGTTaGTTCTGTTCAGCACTGTTTTACCGATGCCTTGTA +
Preference number: 6 (lower is better)
Translates to: CTPTSGLTFIPG*FCSALFYRCLV
Trigger: TACAAGGCATCGGTAAAACAGTGCTGAACAGAACCAACCTGGTATAAAGGTCAAGCCACTCGTAGGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508599.1
CDS TCA 72 bp ATCGGATATTCTGTCCAGGTGGGATGCCATAAGATGTaGCAGACATTCCCTGAATCTTCGTTCCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: IGYSVQVGCHKM*QTFPESSFLIL
Trigger: CAGAATCAGGAACGAAGATTCAGGGAATGTCTGTCACATCTTATGGCATCCCACCTGGACAGAATATCCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515541.1
CDS CAA 72 bp CCAGAGCTAAAGTTCTCAAACAAGCAAATACAGGTTTaGGAGACTGTTGTTCACTCCACCCAGTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PELKFSNKQIQV*ETVVHSTQCPL
Trigger: AAGAGGACACTGGGTGGAGTGAACAACAGTCTCCAAAACCTGTATTTGCTTGTTTGAGAACTTTAGCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS CAA 90 bp GAAATAGTGCTTGGGAGTCAGAAGACTCAAAGTCTAATGTCAGCTTaGTCACTAGTTCATAACCATAAAACAGTGACAACACCACCTACT +
Preference number: 6 (lower is better)
Translates to: EIVLGSQKTQSLMSA*SLVHNHKTVTTPPT
Trigger: AGTAGGTGGTGTTGTCACTGTTTTATGGTTATGAACTAGTGACAAAGCTGACATTAGACTTTGAGTCTTCTGACTCCCAAGCACTATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505715.1
CDS CAA 72 bp AGTTCTCAAACAAGCAAATACAGGTTTTGGAGACTGTaGTTCACTCCACCCAGTGTCCTCTTAGTTATTTTC +
Preference number: 6 (lower is better)
Translates to: SSQTSKYRFWRL*FTPPSVLLVIF
Trigger: GAAAATAACTAAGAGGACACTGGGTGGAGTGAACAACAGTCTCCAAAACCTGTATTTGCTTGTTTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342820.10
CDS CAA 72 bp CTTGGGAGTCAGAAGACTCAAAGTCTAATGTCAGCTTaGTCACTAGTTCATAACCATAAAACAGTGACAACA +
Preference number: 6 (lower is better)
Translates to: LGSQKTQSLMSA*SLVHNHKTVTT
Trigger: TGTTGTCACTGTTTTATGGTTATGAACTAGTGACAAAGCTGACATTAGACTTTGAGTCTTCTGACTCCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505715.1
CDS GCA 72 bp TACCTTGGGCATATATTTAGACTAACAATACAAAACTaGTATAAAAGAGATACCTACCTGGAAAGTACCGCT +
Preference number: 6 (lower is better)
Translates to: YLGHIFRLTIQN*YKRDTYLESTA
Trigger: AGCGGTACTTTCCAGGTAGGTATCTCTTTTATAGCAGTTTTGTATTGTTAGTCTAAATATATGCCCAAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505715.1