RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAPSS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198682

Ensembl transcript IDs: ENST00000361175.8, ENST00000456849.2, ENST00000465996.5, ENST00000482258.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGCGCTGCTGCTGCATCAGGGCCATCCTTTCTGCAAGACACAATaGCCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCC +
Preference number: 1 (lower is better)
Translates to: LALLLHQGHPFCKTQ*PQQRAGKITFHDIA
Trigger: GGCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTGCAGAAAGGATGGCCCTGATGCAGCAGCAGCGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR TCA 90 bp AGCACTTTCTGTTCGAGGAACTTTGTTAAGCAGCTGAGGGGAATCTaGCCCAGCTCCTGTGTTGTCTGGTGTAGACAGGGCACCAGACTG +
Preference number: 1 (lower is better)
Translates to: STFCSRNFVKQLRGI*PSSCVVWCRQGTRL
Trigger: CAGTCTGGTGCCCTGTCTACACCAGACAACACAGGAGCTGGGTCAGATTCCCCTCAGCTGCTTAACAAAGTTCCTCGAACAGAAAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR TCA 90 bp GCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCACATTGTTTaGCGTCCTTTCATCAAATCACTGTATGCTATTAAAAGTCACCGT +
Preference number: 1 (lower is better)
Translates to: AKSGKDNFPRHRHIV*RPFIKSLYAIKSHR
Trigger: ACGGTGACTTTTAATAGCATACAGTGATTTGATGAAAGGACGTCAAACAATGTGGCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR GCA 90 bp GTAACTAGACACATGGTCAAACAAAGCCTTAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTTATTA +
Preference number: 1 (lower is better)
Translates to: VTRHMVKQSLKKSGT*LLRCSRKYIELILL
Trigger: TAATAAAATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTTTGACCATGTGTCTAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGTACAGCTGGCGCTGCTaGTGCATCAGGGCCATCCTT +
Preference number: 2 (lower is better)
Translates to: GVDRAPDWESSGLGASSLYSWRC*CIRAIL
Trigger: AAGGATGGCCCTGATGCAGCAGCAGCGCCAGCTGTA...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGTTCTGCAAGACACAATaGCCACAGCAAAGAGCGGGA +
Preference number: 2 (lower is better)
Translates to: GVDRAPDWESSGLGASSLFCKTQ*PQQRAG
Trigger: TCCCGCTCTTTGCTGTGGTCATTGTGTCTTGCAGAA...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAGCTGGCGCTGCTGCTaGATCAGGGCCATCCTTTCT +
Preference number: 2 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFESWRCC*IRAILS
Trigger: AGAAAGGATGGCCCTGATGCAGCAGCAGCGCCAGCT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTGTCAAGTGGCCTGGGTaGTTCTTCACTGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELVKWPG*FFTATS
Trigger: GCTGGTGGCAGTGAAGAAGCACCCAGGCCACTTGAC...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGAAGTCACCGTGTAACTaGAGTTACATTATTCACAGA +
Preference number: 2 (lower is better)
Translates to: GVDRAPDWESSGLGASSLKSPCN*SYIIHR
Trigger: TCTGTGAATAATGTAACTCCAGTTACACGGTGACTT...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAGTCAAGTGGCCTGGGTaGTTCTTCACTGCCACCAGC +
Preference number: 2 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAVKWPG*FFTATS
Trigger: GCTGGTGGCAGTGAAGAAGCACCCAGGCCACTTGAC...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGACTTTGTTAAGCAGCTaGGGGGAATCTGACCCAGCT +
Preference number: 2 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFETLLSS*GESDPA
Trigger: AGCTGGGTCAGATTCCCCTCAGCTGCTTAACAAAGT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEKKSGT*LLRCSR
Trigger: TCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTAGACTGGGAGTCAAGTaGCCTGGGTGCTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELRLGVK*PGCFFT
Trigger: AGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATAGCTGGCGCTGCTGCTaGATCAGGGCCATCCTTTCT +
Preference number: 2 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHSWRCC*IRAILS
Trigger: AGAAAGGATGGCCCTGATGCAGCAGCAGCGCCAGCT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATGGGAGTCAAGTGGCCTaGGTGCTTCTTCACTGCCAC +
Preference number: 2 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHGSQVA*VLLHCH
Trigger: GTGGCAGTGAAGAAGCACCCAGGCCACTTGACTCCC...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGCTCCTGTGTTGTCTaGTGTAGACAGGGCACCAGA +
Preference number: 2 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKASSCVV*CRQGTR
Trigger: TCTGGTGCCCTGTCTACACCAGACAACACAGGAGCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCTATCAGGAAGAATCTTaGTGTGAGCCACACCTCTTT +
Preference number: 2 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRYQEES*CEPHLF
Trigger: AAAGAGGTGTGGCTCACATCAAGATTCTTCCTGATA...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCATTCTGCAAGACACAATaGCCACAGCAAAGAGCGGGA +
Preference number: 2 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAFCKTQ*PQQRAG
Trigger: TCCCGCTCTTTGCTGTGGTCATTGTGTCTTGCAGAA...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAACCTGCCTGCTCAGGTaGAGTAGAAAATACATAGAG +
Preference number: 2 (lower is better)
Translates to: STFQYPRRQLCKHFLFEETCLLR*SRKYIE
Trigger: CTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGT...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTGGAAGAATCTTGATGTaGGCCACACCTCTTTTAGAG +
Preference number: 2 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELGRILM*ATPLLE
Trigger: CTCTAAAAGAGGTGTGGCTCACATCAAGATTCTTCC...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGCATCGCCACATTGTTTaGCGTCCTTTCATCAAATCA +
Preference number: 2 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEHRHIV*RPFIKS
Trigger: TGATTTGATGAAAGGACGTCAAACAATGTGGCGATG...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTCAGCTGAGGGGAATCTaGCCCAGCTCCTGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFQLRGI*PSSCVV
Trigger: GACAACACAGGAGCTGGGTCAGATTCCCCTCAGCTG...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAATCTGGGACCTGCCTaGTCAGGTGCAGTAGAAAAT +
Preference number: 2 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKANLGPA*SGAVEN
Trigger: ATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTACAGCTGGCGCTGCTaGTGCATCAGGGCCATCCTT +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFYSWRC*CIRAIL
Trigger: AAGGATGGCCCTGATGCAGCAGCAGCGCCAGCTGTA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGTATTACAGCTGGCGCTaGTGCTGCATCAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWYYSWR*CCIRAI
Trigger: GATGGCCCTGATGCAGCAGCAGCGCCAGCTGTAATA...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAATGTTCACCTGTAAGATaGAAGGGTTGGATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: STFQYPRRQLCKHFLFEECSPVR*KGWILC
Trigger: ACAAAGAATCCAACCCTTTCATCTTACAGGTGAACA...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CAA 90 bp CCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCACATaGTTTGACGTCCTTTCATCAAATCACTGTATGCTATTAAAAGTC +
Preference number: 2 (lower is better)
Translates to: PQQRAGKITFHDIAT*FDVLSSNHCMLLKV
Trigger: GACTTTTAATAGCATACAGTGATTTGATGAAAGGACGTCAAACAATGTGGCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGA +
Preference number: 2 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWKKSGT*LLRCSR
Trigger: TCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTAGACTGGGAGTCAAGTaGCCTGGGTGCTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFRLGVK*PGCFFT
Trigger: AGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTAGCTCCTGTGTTGTCTaGTGTAGACAGGGCACCAGA +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFSSCVV*CRQGTR
Trigger: TCTGGTGCCCTGTCTACACCAGACAACACAGGAGCT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTACTTTGTTAAGCAGCTaGGGGGAATCTGACCCAGCT +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFTLLSS*GESDPA
Trigger: AGCTGGGTCAGATTCCCCTCAGCTGCTTAACAAAGT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATACCTGCCTGCTCAGGTaGAGTAGAAAATACATAGAG +
Preference number: 2 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHTCLLR*SRKYIE
Trigger: CTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATTATCAGGAAGAATCTTaGTGTGAGCCACACCTCTTT +
Preference number: 2 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHYQEES*CEPHLF
Trigger: AAAGAGGTGTGGCTCACATCAAGATTCTTCCTGATA...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCATCGCCACATTGTTTaGCGTCCTTTCATCAAATCA +
Preference number: 2 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHHRHIV*RPFIKS
Trigger: TGATTTGATGAAAGGACGTCAAACAATGTGGCGATG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCACAAAACACATACATGTaGATCATCACAGTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAQNTYM*IITVCS
Trigger: TGAACAAACTGTGATGATGCACATGTATGTGTTTTG...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR TCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTGTTCACCTGTAAGATaGAAGGGTTGGATTCTTTGT +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFCSPVR*KGWILC
Trigger: ACAAAGAATCCAACCCTTTCATCTTACAGGTGAACA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTAAGTCACCGTGTAACTaGAGTTACATTATTCACAGA +
Preference number: 2 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFKSPCN*SYIIHR
Trigger: TCTGTGAATAATGTAACTCCAGTTACACGGTGACTT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CCA 72 bp GTCTGGTGTAGACAGGGCACCAGACTGGGAGTCAAGTaGCCTGGGTGCTTCTTCACTGCCACCAGCACTTCC +
Preference number: 3 (lower is better)
Translates to: VWCRQGTRLGVK*PGCFFTATSTS
Trigger: GGAAGTGCTGGTGGCAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR TCA 72 bp TGTTCGAGGAACTTTGTTAAGCAGCTGAGGGGAATCTaGCCCAGCTCCTGTGTTGTCTGGTGTAGACAGGGC +
Preference number: 3 (lower is better)
Translates to: CSRNFVKQLRGI*PSSCVVWCRQG
Trigger: GCCCTGTCTACACCAGACAACACAGGAGCTGGGTCAGATTCCCCTCAGCTGCTTAACAAAGTTCCTCGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGGTGCATCATCACAGTTaGTTCACCTGTAAGATGAAA +
Preference number: 3 (lower is better)
Translates to: GVDRAPDWESSGLGASSLVHHHS*FTCKMK
Trigger: TTTCATCTTACAGGTGAACAAACTGTGATGATGCAC...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAGACCCAGCTCCTGTGTaGTCTGGTGTAGACAGGGCA +
Preference number: 3 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEDPAPV*SGVDRA
Trigger: TGCCCTGTCTACACCAGACAACACAGGAGCTGGGTC...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR TCA 72 bp CTGCTGCATCAGGGCCATCCTTTCTGCAAGACACAATaGCCACAGCAAAGAGCGGGAAAGATAACTTTCCAC +
Preference number: 3 (lower is better)
Translates to: LLHQGHPFCKTQ*PQQRAGKITFH
Trigger: GTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTGCAGAAAGGATGGCCCTGATGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGCACGACATCGCCACATaGTTTGACGTCCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEHDIAT*FDVLSS
Trigger: TGATGAAAGGACGTCAAACAATGTGGCGATGTCGTG...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAATTGGAAGAGTACAGGTaGTCAAGACATGCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: STFQYPRRQLCKHFLFEELEEYR*SRHAGK
Trigger: TTTTCCAGCATGTCTTGACAACCTGTACTCTTCCAA...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR GCA 72 bp CACATGGTCAAACAAAGCCTTAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGAAAATACATAGAGCTA +
Preference number: 3 (lower is better)
Translates to: HMVKQSLKKSGT*LLRCSRKYIEL
Trigger: TAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTTTGACCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCACGACATCGCCACATaGTTTGACGTCCTTTCATCA +
Preference number: 3 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHHDIAT*FDVLSS
Trigger: TGATGAAAGGACGTCAAACAATGTGGCGATGTCGTG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATACATCGCCACATTGTTaGACGTCCTTTCATCAAATC +
Preference number: 3 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHTSPHC*TSFHQI
Trigger: GATTTGATGAAAGGACGTCAAACAATGTGGCGATGT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTTGGAAGAGTACAGGTaGTCAAGACATGCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMLEEYR*SRHAGK
Trigger: TTTTCCAGCATGTCTTGACAACCTGTACTCTTCCAA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATACGTTATTGCACATTTaGTTTCTCCAGTCAGGTCTT +
Preference number: 3 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHTLLHI*FLQSGL
Trigger: AAGACCTGACTGGAGAAACAAAATGTGCAATAACGT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR-3UTR CAA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGACATCGCCACATTGTTaGACGTCCTTTCATCAAATC +
Preference number: 3 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWTSPHC*TSFHQI
Trigger: GATTTGATGAAAGGACGTCAAACAATGTGGCGATGT...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR TCA 72 bp GGGAAAGATAACTTTCCACGACATCGCCACATTGTTTaGCGTCCTTTCATCAAATCACTGTATGCTATTAAA +
Preference number: 3 (lower is better)
Translates to: GKDNFPRHRHIV*RPFIKSLYAIK
Trigger: TTTAATAGCATACAGTGATTTGATGAAAGGACGTCAAACAATGTGGCGATGTCGTGGAAAGTTATCTTTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCCCCGACATGCTGGCTaGCTGCGGCGGAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLPRHAG*LRRSPG
Trigger: ACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGAGCAGCAGCAGCGGCTaGCGGACTCCCGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLSSSSG*RTPGKE
Trigger: CTCCTTCCCGGGAGTCCGGCAGCCGCTGCTGCTGCT...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS-3UTR TCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGACGTCGCACTTCCCTTaGCCAGCCCCCTTCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLTSHFP*PAPFSY
Trigger: GTAGGAGAAGGGGGCTGGTCAAGGGAAGTGCGACGT...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCGACATGCTGGCTGGCTaGGGCGGAGCCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRDMLAG*GGARVP
Trigger: CGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTC...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCCCCGACATGCTGGCTaGCTGCGGCGGAGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRPRHAG*LRRSPG
Trigger: ACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGG...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGGGCCATGAAGCCATCTaGGGGATTCTCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLGHEAI*GILSFP
Trigger: CGGGAAGGAGAGAATCCCCCAGATGGCTTCATGGCC...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCCGTCTTTTGCTTCTTaGTCCCCGACATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLPSFAS*SPTCWL
Trigger: CAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGTGTCAGGACCTTCCATaGTTTGGGGGCCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLCQDLP*FGGHEA
Trigger: GGCTTCATGGCCCCCAAAGCATGGAAGGTCCTGACA...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCCATGCTCAAGACCTTaGCCCCATGAGTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLPCSRP*PHEWVH
Trigger: ATGAACCCACTCATGGGGGCAAGGTCTTGAGCATGG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGTGGGGATGCTCATGTTaGTCACGCCATCATCTAGCA +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLWGCSC*SRHHLA
Trigger: TGCTAGATGATGGCGTGATCAACATGAGCATCCCCA...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAGACATGCTGGCTGGCTaGGGCGGAGCCCGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKADMLAG*GGARVP
Trigger: CGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTC...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGGGCAGCCACTCGGAATaGAATGATTTCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLGSHSE*NDFHRG
Trigger: ACCTCTGTGGAAATCATTCCATTCCGAGTGGCTGCC...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCTCATTGTGCCTTGCTaGATCATAGAAGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLLIVPC*IIEVHG
Trigger: GCCATGGACTTCTATGATCCAGCAAGGCACAATGAG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCTGCGGCGAGTGTCCTaGATCAACAGGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRLRRVS*INRAWP
Trigger: TGGCCATGCCCTGTTGATGCAGGACACTCGCCGCAG...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCATACAGATCCTTCTTaGTTTCAGGATGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLHTDPS*FQDGAF
Trigger: GAATGCCCCATCCTGAAACCAAGAAGGATCTGTATG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGCATCGCCACATTGTTTaGCGTCCTTTCATCAAATCA +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLHRHIV*RPFIKS
Trigger: TGATTTGATGAAAGGACGTCAAACAATGTGGCGATG...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGTCGAGCACAGCCGCGTaGTGCTTCATCCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFESSTAA*CFIRQS
Trigger: AGACTGGCGGATGAAGCAGCACGCGGCTGTGCTCGA...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTATCCGGGACCTGCAGTaGCACTGGACCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELIRDLQ*HWTSVG
Trigger: CCCCACAGAGGTCCAGTGGCACTGCAGGTCCCGGAT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCCTCCGTCCACCATGTaGCAGGACAAACTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRPPSTM*QDKLAA
Trigger: TGCAGCAAGTTTGTCCTGGCACATGGTGGACGGAGG...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAAGCACAGCCGCGTGCTaGTTCATCCGCCAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEESTAAC*FIRQSR
Trigger: TCTAGACTGGCGGATGAAGCAGCACGCGGCTGTGCT...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGTACAGCTGGCGCTGCTaGTGCATCAGGGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEYSWRC*CIRAIL
Trigger: AAGGATGGCCCTGATGCAGCAGCAGCGCCAGCTGTA...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAGTCAAGTGGCCTGGGTaGTTCTTCACTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEVKWPG*FFTATS
Trigger: GCTGGTGGCAGTGAAGAAGCACCCAGGCCACTTGAC...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGGGAGTCAAGTGGCCTaGGTGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEGSQVA*VLLHCH
Trigger: GTGGCAGTGAAGAAGCACCCAGGCCACTTGACTCCC...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCAAGACCTTGCCCCCATaGGTGGGTTCATACAGATCC +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRKTLPP*VGSYRS
Trigger: GGATCTGTATGAACCCACTCATGGGGGCAAGGTCTT...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCGCCCTCTCTTATTCCTaGTCACATGGTGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRALSYS*SHGGPD
Trigger: ATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGC...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTCGAGCACAGCCGCGTaGTGCTTCATCCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELISSTAA*CFIRQS
Trigger: AGACTGGCGGATGAAGCAGCACGCGGCTGTGCTCGA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACAATCATCCGGGACCTaGAGTGCCACTGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTQSSGT*SATGPL
Trigger: CAGAGGTCCAGTGGCACTGCAGGTCCCGGATGATTG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTAGGATGGGGCATTCCTaGAGGGTCCCTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELRMGHS*RVPPHN
Trigger: ATTGTGGGGAGGGACCCTGCAGGAATGCCCCATCCT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGTGTCAGGACCTTCCATaGTTTGGGGGCCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFECQDLP*FGGHEA
Trigger: GGCTTCATGGCCCCCAAAGCATGGAAGGTCCTGACA...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCACAGCTGAGGGGAATCTaGCCCAGCTCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAQLRGI*PSSCVV
Trigger: GACAACACAGGAGCTGGGTCAGATTCCCCTCAGCTG...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATATCCGGGACCTGCAGTaGCACTGGACCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHIRDLQ*HWTSVG
Trigger: CCCCACAGAGGTCCAGTGGCACTGCAGGTCCCGGAT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCACAATCATCCGGGACCTaGAGTGCCACTGGACCTCTG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAQSSGT*SATGPL
Trigger: CAGAGGTCCAGTGGCACTGCAGGTCCCGGATGATTG...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGGATGGGGCATTCCTaGAGGGTCCCTCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKARMGHS*RVPPHN
Trigger: ATTGTGGGGAGGGACCCTGCAGGAATGCCCCATCCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGCCATGCTCAAGACCTTaGCCCCATGAGTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEPCSRP*PHEWVH
Trigger: ATGAACCCACTCATGGGGGCAAGGTCTTGAGCATGG...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTAGCTGGCGCTGCTGCTaGATCAGGGCCATCCTTTCT +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELISWRCC*IRAILS
Trigger: AGAAAGGATGGCCCTGATGCAGCAGCAGCGCCAGCT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTACAGCTGGCGCTGCTaGTGCATCAGGGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIYSWRC*CIRAIL
Trigger: AAGGATGGCCCTGATGCAGCAGCAGCGCCAGCTGTA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATATTACAGCTGGCGCTaGTGCTGCATCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTYYSWR*CCIRAI
Trigger: GATGGCCCTGATGCAGCAGCAGCGCCAGCTGTAATA...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGCATCAGGAAGGGCCATaGCATCTAGCAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEHQEGP*HLAGCQ
Trigger: TTGACACCCTGCTAGATGGCATGGCCCTTCCTGATG...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS-3UTR CCA 90 bp GGTGTAGACAGGGCACCAGACTGGGAGTCAAGTGGCCTGGGTGCTTCTTCACTGGGCACAAAGAGTTCGTaGATATCTTTGATTATAGTA +
Preference number: 4 (lower is better)
Translates to: GVDRAPDWESSGLGASSLGTKSS*ISLIIV
Trigger: TACTATAATCAAAGATATCCACGAACTCTTTGTGCC...CAGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCTGGTGCCCTGTCTACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCCACAATGTAGAAATTaGCACCCGCAATCATCCGGG +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRPQCRN*HPQSSG
Trigger: CCCGGATGATTGCGGGTGCCAATTTCTACATTGTGG...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAGGCCATGAAGCCATCTaGGGGATTCTCTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAGHEAI*GILSFP
Trigger: CGGGAAGGAGAGAATCCCCCAGATGGCTTCATGGCC...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAAGACTGGGAGTCAAGTaGCCTGGGTGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEERLGVK*PGCFFT
Trigger: AGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCT...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAGCTCCTGTGTTGTCTaGTGTAGACAGGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFESSCVV*CRQGTR
Trigger: TCTGGTGCCCTGTCTACACCAGACAACACAGGAGCT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTCCGTCTTTTGCTTCTTaGTCCCCGACATGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIPSFAS*SPTCWL
Trigger: CAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGG...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGATGGCAACAATGGTTaGCTTGGGATCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIDGNNG*LGIQDP
Trigger: GGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAATGCTTTGGGGGCCATaGAGCCATCTGGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAMLWGP*SHLGDS
Trigger: AGAATCCCCCAGATGGCTTCATGGCCCCCAAAGCAT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACAGCCCTCTCTTATTCCTaGTCACATGGTGGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTALSYS*SHGGPD
Trigger: ATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGC...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTCCAGGACAAACTTGCTaGACCCTTCCAGCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIPGQTC*TLPAVS
Trigger: AGACACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGG...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTAGGGCATGGCCATTGTaGACAGGATTGCGCAACTGG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIRAWPL*TGLRNW
Trigger: CCAGTTGCGCAATCCTGTCCACAATGGCCATGCCCT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGTGCATCAACAGGGCATaGCCATTGTGGACAGGATTG +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFECINRA*PLWTGL
Trigger: CAATCCTGTCCACAATGGCCATGCCCTGTTGATGCA...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACAACAATGGTTGACTTaGGATCCAGGACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEQQWLT*DPGPLP
Trigger: AGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTG...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATTCTTGGTTTCAGGATaGGGCATTCCTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTFLVSG*GIPAGS
Trigger: GGACCCTGCAGGAATGCCCCATCCTGAAACCAAGAA...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTAGCTCCTGTGTTGTCTaGTGTAGACAGGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELSSCVV*CRQGTR
Trigger: TCTGGTGCCCTGTCTACACCAGACAACACAGGAGCT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATTTCTGTTAAGGCCATaGCGGACATTGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTFLLRP*RTLSPS
Trigger: GGATGGGGACAATGTCCGTCATGGCCTTAACAGAAA...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCTTCGAGTTCCTGAGATaGAGTCAAACTCATTGTGCC +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRFEFLR*SQTHCA
Trigger: GGCACAATGAGTTTGACTTCATCTCAGGAACTCGAA...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCAGCAGGGTGTCAAAGTaGATAACCTGTAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRSRVSK*ITCKYS
Trigger: GGAGTACTTACAGGTTATGCACTTTGACACCCTGCT...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACCGTGTCTTATCCTCTaGAGAGACGGGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTPCLIL*RDGQYN
Trigger: ATTGTACTGCCCGTCTCTGCAGAGGATAAGACACGG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATGTGCCAGGACAAACTTaGTGCACCCTTCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHVPGQT*CTLPAV
Trigger: CACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCAC...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCTGCGGCGAGTGTCCTaGATCAACAGGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWLRRVS*INRAWP
Trigger: TGGCCATGCCCTGTTGATGCAGGACACTCGCCGCAG...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCCCTCTCTAGGAGCCTaGGGCGAGTGTCCTGCATCA +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSPSLGA*GECPAS
Trigger: TGATGCAGGACACTCGCCGCAGGCTCCTAGAGAGGG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGCCCTCTCTAGGAGCCTaGGGCGAGTGTCCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMPSLGA*GECPAS
Trigger: TGATGCAGGACACTCGCCGCAGGCTCCTAGAGAGGG...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATAGCACAGCCGCGTGCTaGTTCATCCGCCAGTCTAGA +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHSTAAC*FIRQSR
Trigger: TCTAGACTGGCGGATGAAGCAGCACGCGGCTGTGCT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAATCTGGGACCTGCCTaGTCAGGTGCAGTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFENLGPA*SGAVEN
Trigger: ATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAACAGGATTGCGCAACTaGAATGCAAACACCGCATCA +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEETGLRN*NANTAS
Trigger: TGATGCGGTGTTTGCATTCCAGTTGCGCAATCCTGT...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGACTGGGAGTCAAGTaGCCTGGGTGCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKARLGVK*PGCFFT
Trigger: AGTGAAGAAGCACCCAGGCCACTTGACTCCCAGTCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGGAAGAATCTTGATGTaGGCCACACCTCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEGRILM*ATPLLE
Trigger: CTCTAAAAGAGGTGTGGCTCACATCAAGATTCTTCC...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTTCTGCAAGACACAATaGCCACAGCAAAGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIFCKTQ*PQQRAG
Trigger: TCCCGCTCTTTGCTGTGGTCATTGTGTCTTGCAGAA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGTGCCAGGACAAACTTaGTGCACCCTTCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWVPGQT*CTLPAV
Trigger: CACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCAC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCCTCCGTCCACCATGTaGCAGGACAAACTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHPPSTM*QDKLAA
Trigger: TGCAGCAAGTTTGTCCTGGCACATGGTGGACGGAGG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGATTGCGCAACTGGAATaGAAACACCGCATCAGCATT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEIAQLE*KHRISI
Trigger: AATGCTGATGCGGTGTTTGCATTCCAGTTGCGCAAT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIKKSGT*LLRCSR
Trigger: TCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAAGAAATCTGGGACCTaGCTGCTCAGGTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAKKSGT*LLRCSR
Trigger: TCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGTTCCACTACCTGGTaGACACAGTCACTCACTGTG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKASSTTW*TQSLTV
Trigger: CACAGTGAGTGACTGTGTCCACCAGGTAGTGGAACT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATGCCTCAGCTCGGACGTaGTCAAGTTTGTTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHASART*SSLFSG
Trigger: GCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGC...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTACAGGATTGCGCAACTaGAATGCAAACACCGCATCA +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELTGLRN*NANTAS
Trigger: TGATGCGGTGTTTGCATTCCAGTTGCGCAATCCTGT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTGGCCAGCATATAACATaGGAGACGGAAAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELGQHIT*ETERWQ
Trigger: TTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCC...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCACCTTGCCCCCATGAGTaGGTTCATACAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAPCPHE*VHTDPS
Trigger: AGAAGGATCTGTATGAACCCACTCATGGGGGCAAGG...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTTTCGAGTTCCTGAGATaGAGTCAAACTCATTGTGCC +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELFEFLR*SQTHCA
Trigger: GGCACAATGAGTTTGACTTCATCTCAGGAACTCGAA...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGATGCTTTGGGGGCCATaGAGCCATCTGGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMMLWGP*SHLGDS
Trigger: AGAATCCCCCAGATGGCTTCATGGCCCCCAAAGCAT...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAATATCAGGAAGAATCTTaGTGTGAGCCACACCTCTTT +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEYQEES*CEPHLF
Trigger: AAAGAGGTGTGGCTCACATCAAGATTCTTCCTGATA...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCTGTTCACCTGTAAGATaGAAGGGTTGGATTCTTTGT +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRCSPVR*KGWILC
Trigger: ACAAAGAATCCAACCCTTTCATCTTACAGGTGAACA...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTGGGGATGCTCATGTTaGTCACGCCATCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMWGCSC*SRHQEG
Trigger: CCCTTCCTGATGGCGTGATCAACATGAGCATCCCCA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTGGTTCTCCGTCTTTTaGTTCTTGATCCCCGACATG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIWFSVF*FLIPDM
Trigger: CATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCCAGGACAAACTTGCTaGACCCTTCCAGCCGTGTCT +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSPGQTC*TLPAVS
Trigger: AGACACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACATTGTGGACAGGATTaGGCAACTGGAATGCAAACA +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTHCGQD*ATGMQT
Trigger: TGTTTGCATTCCAGTTGCGCAATCCTGTCCACAATG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCAAACTCATTGTGCCTTaGTGGATCATAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRKLIVP*WIIEVH
Trigger: ATGGACTTCTATGATCCAGCAAGGCACAATGAGTTT...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAAAACCTGGACCCACTaGAGATCCAGCTTAGTAATT +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEKTWTH*RSSLVI
Trigger: AATTACTAAGCTGGATCTCCAGTGGGTCCAGGTTTT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTAGGGCATGGCCATTGTaGACAGGATTGCGCAACTGG +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSRAWPL*TGLRNW
Trigger: CCAGTTGCGCAATCCTGTCCACAATGGCCATGCCCT...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCATGGGAGACGGAAAGATaGCAACAATGGTTGACTTGG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAWETER*QQWLTW
Trigger: CCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCA...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACATACAGATCCTTCTTaGTTTCAGGATGGGGCATTC +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTHTDPS*FQDGAF
Trigger: GAATGCCCCATCCTGAAACCAAGAAGGATCTGTATG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTGGGAGTCAAGTGGCCTaGGTGCTTCTTCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFGSQVA*VLLHCH
Trigger: GTGGCAGTGAAGAAGCACCCAGGCCACTTGACTCCC...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGAATGGCAGCCCTGCTaGTTCATGTATTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWEWQPC*FMYFAG
Trigger: GCCCGCAAAATACATGAATCAGCAGGGCTGCCATTC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGGAATGGCAGCCCTGCTaGTTCATGTATTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMEWQPC*FMYFAG
Trigger: GCCCGCAAAATACATGAATCAGCAGGGCTGCCATTC...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGGAAGAATCTTGATGTaGGCCACACCTCTTTTAGAG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIGRILM*ATPLLE
Trigger: CTCTAAAAGAGGTGTGGCTCACATCAAGATTCTTCC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATACTTTGTTAAGCAGCTaGGGGGAATCTGACCCAGCT +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHTLLSS*GESDPA
Trigger: AGCTGGGTCAGATTCCCCTCAGCTGCTTAACAAAGT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACTGATTCATGTATTTTaGGGGCATTCTCACGATCCT +
Preference number: 4 (lower is better)
Translates to: NKALRNLGPACSGAVENTLIHVF*GHSHDP
Trigger: AGGATCGTGAGAATGCCCGCAAAATACATGAATCAG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTACAATGTTCTGCTCTTaGAGAAGTTCCACTACCTGG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELITMFCS*RSSTTW
Trigger: CCAGGTAGTGGAACTTCTGCAAGAGCAGAACATTGT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGCAGGGTGTCAAAGTaGATAACCTGTAAGTACTCC +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKASRVSK*ITCKYS
Trigger: GGAGTACTTACAGGTTATGCACTTTGACACCCTGCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAATTGCGCAACTGGAATaGAAACACCGCATCAGCATT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAIAQLE*KHRISI
Trigger: AATGCTGATGCGGTGTTTGCATTCCAGTTGCGCAAT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAACCTGCCTGCTCAGGTaGAGTAGAAAATACATAGAG +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKATCLLR*SRKYIE
Trigger: CTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTTGGTGGATTTCTGCTaGTTCTCCGTCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELILVDFC*FSVFCF
Trigger: GAAGCAAAAGACGGAGAACCAGCAGAAATCCACCAA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGATAGACTACATTGGTaGATTTCTGCTGGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIDRLHW*ISAGSP
Trigger: CGGAGAACCAGCAGAAATCCACCAATGTAGTCTATC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTGCCTCAGCTCGGACGTaGTCAAGTTTGTTTTCCGGC +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFASART*SSLFSG
Trigger: GCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGC...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCCACAATGTAGAAATTaGCACCCGCAATCATCCGGG +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHPQCRN*HPQSSG
Trigger: CCCGGATGATTGCGGGTGCCAATTTCTACATTGTGG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGTTCTTGGTTTCAGGATaGGGCATTCCTGCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWFLVSG*GIPAGS
Trigger: GGACCCTGCAGGAATGCCCCATCCTGAAACCAAGAA...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATGGCAGCCACTCGGAATaGAATGATTTCCACAGAGGT +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHGSHSE*NDFHRG
Trigger: ACCTCTGTGGAAATCATTCCATTCCGAGTGGCTGCC...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CAA 72 bp AGAGCGGGAAAGATAACTTTCCACGACATCGCCACATaGTTTGACGTCCTTTCATCAAATCACTGTATGCTA +
Preference number: 4 (lower is better)
Translates to: RAGKITFHDIAT*FDVLSSNHCML
Trigger: TAGCATACAGTGATTTGATGAAAGGACGTCAAACAATGTGGCGATGTCGTGGAAAGTTATCTTTCCCGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTTTTCTGTTAAGGCCATaGCGGACATTGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSFLLRP*RTLSPS
Trigger: GGATGGGGACAATGTCCGTCATGGCCTTAACAGAAA...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTAAGACCTTGCCCCCATaGGTGGGTTCATACAGATCC +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFKTLPP*VGSYRS
Trigger: GGATCTGTATGAACCCACTCATGGGGGCAAGGTCTT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAGGCCTTTTACGTCTCTaGTTTCACAAATATTTAGAG +
Preference number: 4 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEGLLRL*FHKYLE
Trigger: CTCTAAATATTTGTGAAAGCAGAGACGTAAAAGGCC...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCCGTGTCTTATCCTCTaGAGAGACGGGCAGTACAAT +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSPCLIL*RDGQYN
Trigger: ATTGTACTGCCCGTCTCTGCAGAGGATAAGACACGG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTAGTTCCACTACCTGGTaGACACAGTCACTCACTGTG +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSSSTTW*TQSLTV
Trigger: CACAGTGAGTGACTGTGTCCACCAGGTAGTGGAACT...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGGTGTCAGACGGTATTaGTCCAGCCCATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWGVRRY*SSPSFH
Trigger: ATGGAATGATGGGCTGGACCAATACCGTCTGACACC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGGGTGTCAGACGGTATTaGTCCAGCCCATCATTCCAT +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMGVRRY*SSPSFH
Trigger: ATGGAATGATGGGCTGGACCAATACCGTCTGACACC...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGTGCATCAACAGGGCATaGCCATTGTGGACAGGATTG +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWCINRA*PLWTGL
Trigger: CAATCCTGTCCACAATGGCCATGCCCTGTTGATGCA...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCAACAATGGTTGACTTaGGATCCAGGACCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWQQWLT*DPGPLP
Trigger: AGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTG...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGCCTTGCCCCCATGAGTaGGTTCATACAGATCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMPCPHE*VHTDPS
Trigger: AGAAGGATCTGTATGAACCCACTCATGGGGGCAAGG...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTTTCAGAAAGAAACTCTaGAGCCAAAGGCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELFRKKL*SQRLSS
Trigger: AGAACTAAGCCTTTGGCTCCAGAGTTTCTTTCTGAA...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGAAGTCACCGTGTAACTaGAGTTACATTATTCACAGA +
Preference number: 4 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEKSPCN*SYIIHR
Trigger: TCTGTGAATAATGTAACTCCAGTTACACGGTGACTT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTGGTTCTCCGTCTTTTaGTTCTTGATCCCCGACATG +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMWFSVF*FLIPDM
Trigger: CATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATACATTGGTGGATTTCTaGTGGTTCTCCGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHTLVDF*WFSVFC
Trigger: GCAAAAGACGGAGAACCAGCAGAAATCCACCAATGT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAAACTCATTGTGCCTTaGTGGATCATAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAKLIVP*WIIEVH
Trigger: ATGGACTTCTATGATCCAGCAAGGCACAATGAGTTT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGGCCAGCATATAACATaGGAGACGGAAAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWGQHIT*ETERWQ
Trigger: TTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTAAAGACAAACTGCTGTaGCCATTGTGTGTAACTTAT +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELKDKLL*PLCVTY
Trigger: ATAAGTTACACACAATGGCCACAGCAGTTTGTCTTT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTACATTGGTGGATTTCTaGTGGTTCTCCGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSTLVDF*WFSVFC
Trigger: GCAAAAGACGGAGAACCAGCAGAAATCCACCAATGT...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAATTCTCACGATCCTTTaGGAATGGAGAAATAAAGCT +
Preference number: 4 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAILTIL*EWRNKA
Trigger: AGCTTTATTTCTCCATTCGCAAAGGATCGTGAGAAT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTACAATGTTCTGCTCTTaGAGAAGTTCCACTACCTGG +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSTMFCS*RSSTTW
Trigger: CCAGGTAGTGGAACTTCTGCAAGAGCAGAACATTGT...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTCAAAACACATACATGTaGATCATCACAGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELQNTYM*IITVCS
Trigger: TGAACAAACTGTGATGATGCACATGTATGTGTTTTG...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGATAGACTACATTGGTaGATTTCTGCTGGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWDRLHW*ISAGSP
Trigger: CGGAGAACCAGCAGAAATCCACCAATGTAGTCTATC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTCTCATTGTGCCTTGCTaGATCATAGAAGTCCATGGC +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFLIVPC*IIEVHG
Trigger: GCCATGGACTTCTATGATCCAGCAAGGCACAATGAG...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTAAAGACAAACTGCTGTaGCCATTGTGTGTAACTTAT +
Preference number: 4 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIKDKLL*PLCVTY
Trigger: ATAAGTTACACACAATGGCCACAGCAGTTTGTCTTT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CAA 72 bp AGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTaGTTTTCTGTGGTCTTTTCCAGTTCTAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SLFTCKMKGLDS*FSVVFSSSSAL
Trigger: CAAGGCACTAGAACTGGAAAAGACCACAGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGTATCAGGAAGAATCTTaGTGTGAGCCACACCTCTTT +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWYQEES*CEPHLF
Trigger: AAAGAGGTGTGGCTCACATCAAGATTCTTCCTGATA...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCTGATTCATGTATTTTaGGGGCATTCTCACGATCCT +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSLIHVF*GHSHDP
Trigger: AGGATCGTGAGAATGCCCGCAAAATACATGAATCAG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTCATTGTGGACAGGATTaGGCAACTGGAATGCAAACA +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFHCGQD*ATGMQT
Trigger: TGTTTGCATTCCAGTTGCGCAATCCTGTCCACAATG...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CAA 72 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTaGGATTCTTTGTTTTCTGTGGTCTTTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKG*DSLFSVVFSSS
Trigger: AGAACTGGAAAAGACCACAGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFPDRLH*WISAGS
Trigger: AGAACCAGCAGAAATCCACCAATGTAGTCTATCAGG...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTAAAACCTGGACCCACTaGAGATCCAGCTTAGTAATT +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFKTWTH*RSSLVI
Trigger: AATTACTAAGCTGGATCTCCAGTGGGTCCAGGTTTT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTTCAGAAAGAAACTCTaGAGCCAAAGGCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMFRKKL*SQRLSS
Trigger: AGAACTAAGCCTTTGGCTCCAGAGTTTCTTTCTGAA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTGTCTCAGAACAGCTTaGAATCTTTGGAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMCLRTA*NLWNSF
Trigger: AAAGCTATTCCAAAGATTTCAAGCTGTTCTGAGACA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGATTCTCACGATCCTTTaGGAATGGAGAAATAAAGCT +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWILTIL*EWRNKA
Trigger: AGCTTTATTTCTCCATTCGCAAAGGATCGTGAGAAT...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGGCCTTTTACGTCTCTaGTTTCACAAATATTTAGAG +
Preference number: 4 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWGLLRL*FHKYLE
Trigger: CTCTAAATATTTGTGAAAGCAGAGACGTAAAAGGCC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR GCA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCAAAACACATACATGTaGATCATCACAGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHQNTYM*IITVCS
Trigger: TGAACAAACTGTGATGATGCACATGTATGTGTTTTG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTAAGTCACCGTGTAACTaGAGTTACATTATTCACAGA +
Preference number: 4 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSKSPCN*SYIIHR
Trigger: TCTGTGAATAATGTAACTCCAGTTACACGGTGACTT...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR TCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTGTCTCAGAACAGCTTaGAATCTTTGGAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFCLRTA*NLWNSF
Trigger: AAAGCTATTCCAAAGATTTCAAGCTGTTCTGAGACA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
3UTR CAA 72 bp CAGATCTCTAAGATAAAATTCACGTTATTGCACATTTaGTTTCTCCAGTCAGGTCTTCAACACGTAAGATAT +
Preference number: 4 (lower is better)
Translates to: QISKIKFTLLHI*FLQSGLQHVRY
Trigger: ATATCTTACGTGTTGAAGACCTGACTGGAGAAACAAAATGTGCAATAACGTGAATTTTATCTTAGAGATCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CCA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTGGCACAAAGAGTTCGTaGATATCTTTGATTATAGTA +
Preference number: 4 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFGTKSS*ISLIIV
Trigger: TACTATAATCAAAGATATCCACGAACTCTTTGTGCC...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 90 bp TGGTTCTCCGTCTTTTGCTTCTTGATCCCCGACATGCTGGCTGGCTaGGGCGGAGCCCGGGTCCCGGGAGCAGAGACCGAAGGACGCAGG +
Preference number: 5 (lower is better)
Translates to: WFSVFCFLIPDMLAG*GGARVPGAETEGRR
Trigger: CCTGCGTCCTTCGGTCTCTGCTCCCGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp CTGCTGGTTCTCCGTCTTTTGCTTCTTGATCCCCGACATGCTGGCTaGCTGCGGCGGAGCCCGGGTCCCGGGAGCAGAGACCGAAGGACG +
Preference number: 5 (lower is better)
Translates to: LLVLRLLLLDPRHAG*LRRSPGPGSRDRRT
Trigger: CGTCCTTCGGTCTCTGCTCCCGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp CTGTGGGGCCAGCATATAACATGGGAGACGGAAAGATGGCAACAATaGTTGACTTGGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGT +
Preference number: 5 (lower is better)
Translates to: LWGQHITWETERWQQ*LTWDPGPLPRAQPR
Trigger: ACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 90 bp TGCCAGGACAAACTTGCTGCACCCTTCCAGCCGTGTCTTATCCTCTaGAGAGACGGGCAGTACAATGGGGATGCTCATGTTGATCACGCC +
Preference number: 5 (lower is better)
Translates to: CQDKLAAPFQPCLIL*RDGQYNGDAHVDHA
Trigger: GGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGAGGATAAGACACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp ATAATCTGTCAGGACCTTCCATGCTTTGGGGGCCATGAAGCCATCTaGGGGATTCTCTCCTTCCCGGGCGAGCTTCCTCATTCGAGTTCC +
Preference number: 5 (lower is better)
Translates to: IICQDLPCFGGHEAI*GILSFPGELPHSSS
Trigger: GGAACTCGAATGAGGAAGCTCGCCCGGGAAGGAGAGAATCCCCCAGATGGCTTCATGGCCCCCAAAGCATGGAAGGTCCTGACAGATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp CAGCATATAACATGGGAGACGGAAAGATGGCAACAATGGTTGACTTaGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGTGCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QHITWETERWQQWLT*DPGPLPRAQPRAAS
Trigger: TGAAGCAGCACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp ACTGGACCTCTGTGGGGCCAGCATATAACATGGGAGACGGAAAGATaGCAACAATGGTTGACTTGGGATCCAGGACCCCTTCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: TGPLWGQHITWETER*QQWLTWDPGPLPRA
Trigger: TGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCCCCACAGAGGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp GCCCTCTCTTATTCCTGCTCACATGGTGGGCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCTCCTGGCAGAACGGGAGTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ALSYSCSHGGPDRLH*WISAGSPGRTGVSS
Trigger: CGAGCTGACTCCCGTTCTGCCAGGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465996.5
CDS-3UTR CAA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAGTCCCGGGCGAGACCTaGCAGCGGAGCGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAVPGET*QRSGRW
Trigger: CCATCTGCCGCTCCGCTGCAAGGTCTCGCCCGGGAC...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS TCA 90 bp TCTTATCCTCTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTTaGTCACGCCATCAGGAAGGGCCATGCCATCTAGCAGGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: SYPLQRRAVQWGCSC*SRHQEGPCHLAGCQ
Trigger: TTGACACCCTGCTAGATGGCATGGCCCTTCCTGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGAGGATAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCCTCGGAACCCACCCCTaGTTCCAACCACTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRLGTHP*FQPLAL
Trigger: GAGGGCAAGTGGTTGGAACAAGGGGTGGGTTCCGAG...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 90 bp CTCGGAACCCACCCCTTGTTCCAACCACTTGCCCTCTCTTATTCCTaGTCACATGGTGGGCCTGATAGACTACATTGGTGGATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LGTHPLFQPLALSYS*SHGGPDRLHWWISA
Trigger: AGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGGGGTGGGTTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361175.8
ENST00000456849.2
ENST00000465996.5
ENST00000482258.1
CDS GCA 90 bp TTAGTTCTTCTCCAGGGACCTGTAATAATCTGTCAGGACCTTCCATaGTTTGGGGGCCATGAAGCCATCTGGGGGATTCTCTCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LVLLQGPVIICQDLP*FGGHEAIWGILSFP
Trigger: CGGGAAGGAGAGAATCCCCCAGATGGCTTCATGGCCCCCAAAGCATGGAAGGTCCTGACAGATTATTACAGGTCCCTGGAGAAGAACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 90 bp TGGGGGATTCTCTCCTTCCCGGGCGAGCTTCCTCATTCGAGTTCCTaGGATGAAGTCAAACTCATTGTGCCTTGCTGGATCATAGAAGTC +
Preference number: 5 (lower is better)
Translates to: WGILSFPGELPHSSS*DEVKLIVPCWIIEV
Trigger: GACTTCTATGATCCAGCAAGGCACAATGAGTTTGACTTCATCTCAGGAACTCGAATGAGGAAGCTCGCCCGGGAAGGAGAGAATCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 90 bp AGTGGGTTCATACAGATCCTTCTTGGTTTCAGGATGGGGCATTCCTaGAGGGTCCCTCCCCACAATGTAGAAATTGGCACCCGCAATCAT +
Preference number: 5 (lower is better)
Translates to: SGFIQILLGFRMGHS*RVPPHNVEIGTRNH
Trigger: ATGATTGCGGGTGCCAATTTCTACATTGTGGGGAGGGACCCTGCAGGAATGCCCCATCCTGAAACCAAGAAGGATCTGTATGAACCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 90 bp ATCACGCCATCAGGAAGGGCCATGCCATCTAGCAGGGTGTCAAAGTaGATAACCTGTAAGTACTCCTTCTCCCGCATGAAACCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: ITPSGRAMPSSRVSK*ITCKYSFSRMKPLR
Trigger: CCTCAAAGGTTTCATGCGGGAGAAGGAGTACTTACAGGTTATGCACTTTGACACCCTGCTAGATGGCATGGCCCTTCCTGATGGCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTCTCGGAACCCACCCCTaGTTCCAACCACTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELLGTHP*FQPLAL
Trigger: GAGGGCAAGTGGTTGGAACAAGGGGTGGGTTCCGAG...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTTCCCGCATGAAACCTTaGAGGGGAGTGGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELSRMKP*RGVAQP
Trigger: AGGCTGGGCCACTCCCCTCAAAGGTTTCATGCGGGA...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCTCCGTCTTTTGCTTCTaGATCCCCGACATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRSVFCF*IPDMLA
Trigger: AGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGA...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATGTGCCAGGACAAACTaGCTGCACCCTTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTCARTN*LHPSSR
Trigger: ACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCACA...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAAGCAACAATGGTTGACTaGGGATCCAGGACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEATMVD*GSRTPS
Trigger: GGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGC...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACAGACCCAGCTCCTGTGTaGTCTGGTGTAGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTDPAPV*SGVDRA
Trigger: TGCCCTGTCTACACCAGACAACACAGGAGCTGGGTC...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp GCCCTCTCTTATTCCTGCTCACATGGTGGGCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCTCTATGTGTCCATTGCACGTCTATC +
Preference number: 5 (lower is better)
Translates to: ALSYSCSHGGPDRLH*WISAGSLCVHCTSI
Trigger: GATAGACGTGCAATGGACACATAGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482258.1
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGACCCAGCTCCTGTGTaGTCTGGTGTAGACAGGGCA +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIDPAPV*SGVDRA
Trigger: TGCCCTGTCTACACCAGACAACACAGGAGCTGGGTC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACCTTGTTCCAACCACTaGCCCTCTCTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEPCSNH*PSLIPA
Trigger: AGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGG...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATTCCCGCATGAAACCTTaGAGGGGAGTGGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHSRMKP*RGVAQP
Trigger: AGGCTGGGCCACTCCCCTCAAAGGTTTCATGCGGGA...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGCCATTGTGGACAGGATaGCGCAACTGGAATGCAAAC +
Preference number: 5 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFEPLWTG*RNWNAN
Trigger: GTTTGCATTCCAGTTGCGCAATCCTGTCCACAATGG...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACAAGATGGCAACAATGGTaGACTTGGGATCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTRWQQW*TWDPGP
Trigger: GGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCT...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGGACCTTCCATGCTTaGGGGGCCATGAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKARTFHA*GAMKPS
Trigger: AGATGGCTTCATGGCCCCCAAAGCATGGAAGGTCCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 90 bp GGAATGCAAACACCGCATCAGCATTCATTTCTTTACATTTCTGTTTaGGCTCCAGAGGTGTCAGACGGTATTGGTCCAGCCCATCATTCC +
Preference number: 5 (lower is better)
Translates to: GMQTPHQHSFLYISV*APEVSDGIGPAHHS
Trigger: GGAATGATGGGCTGGACCAATACCGTCTGACACCTCTGGAGCTCAAACAGAAATGTAAAGAAATGAATGCTGATGCGGTGTTTGCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp CTCTCTTATTCCTGCTCACATGGTGGGCCTGATAGACTACATTGGTaGATTTCTGCTGGTTCTCTATGTGTCCATTGCACGTCTATCTAC +
Preference number: 5 (lower is better)
Translates to: LSYSCSHGGPDRLHW*ISAGSLCVHCTSIY
Trigger: GTAGATAGACGTGCAATGGACACATAGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482258.1
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACACTGGTTCTCCGTCTTTaGCTTCTTGATCCCCGACAT +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTLVLRL*LLDPRH
Trigger: ATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCAG...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCGGGCAAAACTTATCGTaGTTTTTCCAGCACCAGAGA +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRGQNLS*FFQHQR
Trigger: TCTCTGGTGCTGGAAAAACAACGATAAGTTTTGCCC...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTCGGACGTGGTCAAGTTaGTTTTCCGGCACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELRTWSS*FSGTKS
Trigger: ACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCG...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATTGTGCCAGGACAAACTaGCTGCACCCTTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHCARTN*LHPSSR
Trigger: ACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCACA...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACAGGTGTTTTGTACATGTaGTCCCCCAAACACGGGAAC +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTGVLYM*SPKHGN
Trigger: GTTCCCGTGTTTGGGGGACAACATGTACAAAACACC...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAAGGTGTCAGACGGTATaGGTCCAGCCCATCATTCCA +
Preference number: 5 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKARCQTV*VQPIIP
Trigger: TGGAATGATGGGCTGGACCAATACCGTCTGACACCT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTAGATGGCAACAATGGTaGACTTGGGATCCAGGACCC +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIRWQQW*TWDPGP
Trigger: GGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACACGACATCGCCACATaGTTTGACGTCCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: STFQYPRRQLCKHFLFEEHDIAT*FDVLSS
Trigger: TGATGAAAGGACGTCAAACAATGTGGCGATGTCGTG...TTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTATGGGGATGCTCATGTaGATCACGCCATCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIMGMLM*ITPSGR
Trigger: CCTTCCTGATGGCGTGATCAACATGAGCATCCCCAT...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS-3UTR CAA 90 bp AACAAAGCCTTAAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACAGCTGATTCATGTATTTaGCGGGCATTCTCACGATCC +
Preference number: 5 (lower is better)
Translates to: NKALRNLGPACSGAVENTADSCI*RAFSRS
Trigger: GGATCGTGAGAATGCCCGCAAAATACATGAATCAGC...TGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTTAAGGCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGGTGTTTTGTACATGTaGTCCCCCAAACACGGGAAC +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIGVLYM*SPKHGN
Trigger: GTTCCCGTGTTTGGGGGACAACATGTACAAAACACC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCACCATTGTGGACAGGATaGCGCAACTGGAATGCAAAC +
Preference number: 5 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKAPLWTG*RNWNAN
Trigger: GTTTGCATTCCAGTTGCGCAATCCTGTCCACAATGG...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATAGGACCTTCCATGCTTaGGGGGCCATGAAGCCATCT +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHRTFHA*GAMKPS
Trigger: AGATGGCTTCATGGCCCCCAAAGCATGGAAGGTCCT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCTTGGAAGAGTACAGGTaGTCAAGACATGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRLEEYR*SRHAGK
Trigger: TTTTCCAGCATGTCTTGACAACCTGTACTCTTCCAA...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATAGGTGTCAGACGGTATaGGTCCAGCCCATCATTCCA +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHRCQTV*VQPIIP
Trigger: TGGAATGATGGGCTGGACCAATACCGTCTGACACCT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGTCTTTACATTTCTGTTaGAGCTCCAGAGGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFESLHFC*SSRGVR
Trigger: TCTGACACCTCTGGAGCTCAAACAGAAATGTAAAGA...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTGCAACAATGGTTGACTaGGGATCCAGGACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSATMVD*GSRTPS
Trigger: GGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGC...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTCAAACTCATTGTGCCTaGCTGGATCATAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELQTHCA*LDHRSP
Trigger: TGGACTTCTATGATCCAGCAAGGCACAATGAGTTTG...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AACTCGACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGACATCGCCACATTGTTaGACGTCCTTTCATCAAATC +
Preference number: 5 (lower is better)
Translates to: NSTFQYPRRQLCKHFLFETSPHC*TSFHQI
Trigger: GATTTGATGAAAGGACGTCAAACAATGTGGCGATGT...CTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGTCGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCAAAGGGTTGGATTCTTaGTTTTCTGTGGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRKGLDS*FSVVFS
Trigger: GGAAAAGACCACAGAAAACAAAGAATCCAACCCTTT...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CAAGACACAATGACCACAGCAAAGAGCGGGAAAGATAACTTTCCACGACATCGCGTGCATCATCACAGTTaGTTCACCTGTAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: QDTMTTAKSGKDNFPRHRVHHHS*FTCKMK
Trigger: TTTCATCTTACAGGTGAACAAACTGTGATGATGCAC...GCGATGTCGTGGAAAGTTATCTTTCCCGCTCTTTGCTGTGGTCATTGTGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 90 bp TTAGTAATTGATAATGAAGGGAGAGTTTCAGCCTCAGCTCGGACGTaGTCAAGTTTGTTTTCCGGCACAAAGAGTTCGTGGATATCTTTG +
Preference number: 5 (lower is better)
Translates to: LVIDNEGRVSASART*SSLFSGTKSSWISL
Trigger: CAAAGATATCCACGAACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGCTGAAACTCTCCCTTCATTATCAATTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATCCTTGTTCCAACCACTaGCCCTCTCTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHPCSNH*PSLIPA
Trigger: AGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGG...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTGGGCAAAACTTATCGTaGTTTTTCCAGCACCAGAGA +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELIGQNLS*FFQHQR
Trigger: TCTCTGGTGCTGGAAAAACAACGATAAGTTTTGCCC...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATATGGGGATGCTCATGTaGATCACGCCATCATCTAGC +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHMGMLM*ITPSSS
Trigger: GCTAGATGATGGCGTGATCAACATGAGCATCCCCAT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTCCGTCTTTTGCTTCTaGATCCCCGACATGCTGGCT +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFSVFCF*IPDMLA
Trigger: AGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCTGGTTCTCCGTCTTTaGCTTCTTGATCCCCGACAT +
Preference number: 5 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSLVLRL*LLDPRH
Trigger: ATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCAG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AAGAAATCTGGGACCTGCCTGCTCAGGTGCAGTAGAAAATACATAGAGCTAATTTCTTTACATTTCTGTTaGAGCTCCAGAGGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: KKSGTCLLRCSRKYIELISLHFC*SSRGVR
Trigger: TCTGACACCTCTGGAGCTCAAACAGAAATGTAAAGA...AATTAGCTCTATGTATTTTCTACTGCACCTGAGCAGGCAGGTCCCAGATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCTTTCAGTATCCGAGAAGGCAGCTTTGTAAGCACTTTCTGTTCGAGGAACTTAAACTGCTGTGGCCATaGTGTGTAACTTATTCTCAA +
Preference number: 5 (lower is better)
Translates to: TFQYPRRQLCKHFLFEELKLLWP*CVTYSQ
Trigger: TTGAGAATAAGTTACACACAATGGCCACAGCAGTTT...AAGTTCCTCGAACAGAAAGTGCTTACAAAGCTGCCTTCTCGGATACTGAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGGCTGATTCATGTATTTaGCGGGCATTCTCACGATCC +
Preference number: 5 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWADSCI*RAFSRS
Trigger: GGATCGTGAGAATGCCCGCAAAATACATGAATCAGC...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATTACAATGTTCTGCTCTaGCAGAAGTTCCACTACCTG +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHYNVLL*QKFHYL
Trigger: CAGGTAGTGGAACTTCTGCAAGAGCAGAACATTGTA...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTCGGACGTGGTCAAGTTaGTTTTCCGGCACAAAGAGT +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFRTWSS*FSGTKS
Trigger: ACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCG...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp GCAATAAAATCAGTGCAGTTCAGAAAACTCGACCTTTCAGTATCCGAGAAGGCAACGTTATTGCACATTTaGTTTCTCCAGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: AIKSVQFRKLDLSVSEKATLLHI*FLQSGL
Trigger: AAGACCTGACTGGAGAAACAAAATGTGCAATAACGT...TGCCTTCTCGGATACTGAAAGGTCGAGTTTTCTGAACTGCACTGATTTTATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCACGACATCGCCACATaGTTTGACGTCCTTTCATCA +
Preference number: 5 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSHDIAT*FDVLSS
Trigger: TGATGAAAGGACGTCAAACAATGTGGCGATGTCGTG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp AGTAACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCAAACTCATTGTGCCTaGCTGGATCATAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: SNRLHEYRHYTIKDKLLWQTHCA*LDHRSP
Trigger: TGGACTTCTATGATCCAGCAAGGCACAATGAGTTTG...CCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTACAATGTTCTGCTCTaGCAGAAGTTCCACTACCTG +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFYNVLL*QKFHYL
Trigger: CAGGTAGTGGAACTTCTGCAAGAGCAGAACATTGTA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTCATACAGATCCTTCTaGGTTTCAGGATGGGGCATT +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFSYRSF*VSGWGI
Trigger: AATGCCCCATCCTGAAACCAAGAAGGATCTGTATGA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATGTGCATCATCACAGTTaGTTCACCTGTAAGATGAAA +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHVHHHS*FTCKMK
Trigger: TTTCATCTTACAGGTGAACAAACTGTGATGATGCAC...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp ACCGATTACATGAGTATAGGCACTATACTATTAAAGACAAACTGCTGTGGCCATAAACTGCTGTGGCCATaGTGTGTAACTTATTCTCAA +
Preference number: 5 (lower is better)
Translates to: TDYMSIGTILLKTNCCGHKLLWP*CVTYSQ
Trigger: TTGAGAATAAGTTACACACAATGGCCACAGCAGTTT...ATGGCCACAGCAGTTTGTCTTTAATAGTATAGTGCCTATACTCATGTAATCGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGCTTTCCATCACCATTTaGATATGGGGGTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMLSITI*IWGCFV
Trigger: TACAAAACACCCCCATATCAAAATGGTGATGGAAAG...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp CATCATCACAGTTTGTTCACCTGTAAGATGAAAGGGTTGGATTCTTTGTTTTCTCTTTCCATCACCATTTaGATATGGGGGTGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: HHHSLFTCKMKGLDSLFSLSITI*IWGCFV
Trigger: TACAAAACACCCCCATATCAAAATGGTGATGGAAAG...AGAAAACAAAGAATCCAACCCTTTCATCTTACAGGTGAACAAACTGTGATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGAAAGGGTTGGATTCTTaGTTTTCTGTGGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMKGLDS*FSVVFS
Trigger: GGAAAAGACCACAGAAAACAAAGAATCCAACCCTTT...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTACGTTATTGCACATTTaGTTTCTCCAGTCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFTLLHI*FLQSGL
Trigger: AAGACCTGACTGGAGAAACAAAATGTGCAATAACGT...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TCAGGTCTTCAACACGTAAGATATGATTACAACATTAAGGCTTTGTACAGCATGTGTAAGATGAAAGGGTaGGATTCTTTGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: SGLQHVRYDYNIKALYSMCKMKG*DSLFSV
Trigger: CACAGAAAACAAAGAATCCAACCCTTTCATCTTACA...CATGCTGTACAAAGCCTTAATGTTGTAATCATATCTTACGTGTTGAAGACCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS-3UTR CAA 90 bp TACATAGAAATAATCATTTGCACTAAGCATGGTACTAGAGCAGAAGAGCAGTTTTGTAAGATGAAAGGGTaGGATTCTTTGTTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: YIEIIICTKHGTRAEEQFCKMKG*DSLFSV
Trigger: CACAGAAAACAAAGAATCCAACCCTTTCATCTTACA...AAACTGCTCTTCTGCTCTAGTACCATGCTTAGTGCAAATGATTATTTCTATGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp CTCCGTCTTTTGCTTCTTGATCCCCGACATGCTGGCTaGCTGCGGCGGAGCCCGGGTCCCGGGAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: LRLLLLDPRHAG*LRRSPGPGSRD
Trigger: GTCTCTGCTCCCGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 72 bp GTCTTTTGCTTCTTGATCCCCGACATGCTGGCTGGCTaGGGCGGAGCCCGGGTCCCGGGAGCAGAGACCGAA +
Preference number: 6 (lower is better)
Translates to: VFCFLIPDMLAG*GGARVPGAETE
Trigger: TTCGGTCTCTGCTCCCGGGACCCGGGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 72 bp TTGGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGTaGTGCTTCATCCGCCAGTCTAGAGGCACATCGTCA +
Preference number: 6 (lower is better)
Translates to: LGSRTPSSSTAA*CFIRQSRGTSS
Trigger: TGACGATGTGCCTCTAGACTGGCGGATGAAGCAGCACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 72 bp TGGTGGATTTCTGCTGGTTCTCCGTCTTTTGCTTCTTaGTCCCCGACATGCTGGCTGGCTGCGGCGGAGCCC +
Preference number: 6 (lower is better)
Translates to: WWISAGSPSFAS*SPTCWLAAAEP
Trigger: GGGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCAGCAGAAATCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp GCATTCCTGCAGGGTCCCTCCCCACAATGTAGAAATTaGCACCCGCAATCATCCGGGACCTGCAGTGCCACT +
Preference number: 6 (lower is better)
Translates to: AFLQGPSPQCRN*HPQSSGTCSAT
Trigger: AGTGGCACTGCAGGTCCCGGATGATTGCGGGTGCCAATTTCTACATTGTGGGGAGGGACCCTGCAGGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 72 bp TTGGTGGATTTCTGCTGGTTCTCCGTCTTTTGCTTCTaGATCCCCGACATGCTGGCTGGCTGCGGCGGAGCC +
Preference number: 6 (lower is better)
Translates to: LVDFCWFSVFCF*IPDMLAGCGGA
Trigger: GGCTCCGCCGCAGCCAGCCAGCATGTCGGGGATCAAGAAGCAAAAGACGGAGAACCAGCAGAAATCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 90 bp TCTCGTAAGATAGCTACCCTCCGTCCACCATGTGCCAGGACAAACTaGCTGCACCCTTCCAGCCGTGTCTTATCCTCTGCAGAGACGGGC +
Preference number: 6 (lower is better)
Translates to: SRKIATLRPPCARTN*LHPSSRVLSSAETG
Trigger: GCCCGTCTCTGCAGAGGATAAGACACGGCTGGAAGGGTGCAGCAAGTTTGTCCTGGCACATGGTGGACGGAGGGTAGCTATCTTACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 90 bp TGGGGCCAGCATATAACATGGGAGACGGAAAGATGGCAACAATGGTaGACTTGGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGTGCT +
Preference number: 6 (lower is better)
Translates to: WGQHITWETERWQQW*TWDPGPLPRAQPRA
Trigger: AGCACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp ACATGGGAGACGGAAAGATGGCAACAATGGTTGACTTaGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGT +
Preference number: 6 (lower is better)
Translates to: TWETERWQQWLT*DPGPLPRAQPR
Trigger: ACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp CCTTGCCCCCATGAGTGGGTTCATACAGATCCTTCTTaGTTTCAGGATGGGGCATTCCTGCAGGGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: PCPHEWVHTDPS*FQDGAFLQGPS
Trigger: GGAGGGACCCTGCAGGAATGCCCCATCCTGAAACCAAGAAGGATCTGTATGAACCCACTCATGGGGGCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 72 bp GGTACATCCTCGGAACCCACCCCTTGTTCCAACCACTaGCCCTCTCTTATTCCTGCTCACATGGTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GTSSEPTPCSNH*PSLIPAHMVGL
Trigger: CAGGCCCACCATGTGAGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGGGGTGGGTTCCGAGGATGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361175.8
ENST00000456849.2
ENST00000465996.5
ENST00000482258.1
CDS CAA 72 bp AACATGGGAGACGGAAAGATGGCAACAATGGTTGACTaGGGATCCAGGACCCCTTCCTCGAGCACAGCCGCG +
Preference number: 6 (lower is better)
Translates to: NMGDGKMATMVD*GSRTPSSSTAA
Trigger: CGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 90 bp CCAGCATATAACATGGGAGACGGAAAGATGGCAACAATGGTTGACTaGGGATCCAGGACCCCTTCCTCGAGCACAGCCGCGTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: PAYNMGDGKMATMVD*GSRTPSSSTAACCF
Trigger: GAAGCAGCACGCGGCTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 72 bp CTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTTaGTCACGCCATCAGGAAGGGCCATGCCATCTAGCA +
Preference number: 6 (lower is better)
Translates to: LQRRAVQWGCSC*SRHQEGPCHLA
Trigger: TGCTAGATGGCATGGCCCTTCCTGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS CAA 72 bp TCTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTaGATCACGCCATCAGGAAGGGCCATGCCATCTAGC +
Preference number: 6 (lower is better)
Translates to: SAETGSTMGMLM*ITPSGRAMPSS
Trigger: GCTAGATGGCATGGCCCTTCCTGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS CAA 90 bp GTCTTATCCTCTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTaGATCACGCCATCAGGAAGGGCCATGCCATCTAGCAGGGTGTCA +
Preference number: 6 (lower is better)
Translates to: VLSSAETGSTMGMLM*ITPSGRAMPSSRVS
Trigger: TGACACCCTGCTAGATGGCATGGCCCTTCCTGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGAGGATAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS CCA 72 bp TCCTGCTCACATGGTGGGCCTGATAGACTACATTGGTaGATTTCTGCTGGTTCTCCTGGCAGAACGGGAGTC +
Preference number: 6 (lower is better)
Translates to: SCSHGGPDRLHW*ISAGSPGRTGV
Trigger: GACTCCCGTTCTGCCAGGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465996.5
CDS CAA 72 bp CTGTTAGCCACACGGTACATCCTCGGAACCCACCCCTaGTTCCAACCACTTGCCCTCTCTTATTCCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LLATRYILGTHP*FQPLALSYSCS
Trigger: TGAGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGGGGTGGGTTCCGAGGATGTACCGTGTGGCTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361175.8
ENST00000456849.2
ENST00000465996.5
ENST00000482258.1
CDS CAA 90 bp TCAAAGTGCATAACCTGTAAGTACTCCTTCTCCCGCATGAAACCTTaGAGGGGAGTGGCCCAGCCTTCGCTCAAAACCTGGACCCACTGG +
Preference number: 6 (lower is better)
Translates to: SKCITCKYSFSRMKP*RGVAQPSLKTWTHW
Trigger: CCAGTGGGTCCAGGTTTTGAGCGAAGGCTGGGCCACTCCCCTCAAAGGTTTCATGCGGGAGAAGGAGTACTTACAGGTTATGCACTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 72 bp CTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTTaGTCACGCCATCATCTAGCAGGGTGTCAAAGTGCA +
Preference number: 6 (lower is better)
Translates to: LQRRAVQWGCSC*SRHHLAGCQSA
Trigger: TGCACTTTGACACCCTGCTAGATGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS GCA 72 bp CACCCCTTGTTCCAACCACTTGCCCTCTCTTATTCCTaGTCACATGGTGGGCCTGATAGACTACATTGGTGG +
Preference number: 6 (lower is better)
Translates to: HPLFQPLALSYS*SHGGPDRLHWW
Trigger: CCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATAAGAGAGGGCAAGTGGTTGGAACAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361175.8
ENST00000456849.2
ENST00000465996.5
ENST00000482258.1
CDS GCA 72 bp AAACTTGCTGCACCCTTCCAGCCGTGTCTTATCCTCTaGAGAGACGGGCAGTACAATGGGGATGCTCATGTT +
Preference number: 6 (lower is better)
Translates to: KLAAPFQPCLIL*RDGQYNGDAHV
Trigger: AACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGAGGATAAGACACGGCTGGAAGGGTGCAGCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp CTGTGGGGCCAGCATATAACATGGGAGACGGAAAGATaGCAACAATGGTTGACTTGGGATCCAGGACCCCTT +
Preference number: 6 (lower is better)
Translates to: LWGQHITWETER*QQWLTWDPGPL
Trigger: AAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCCCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp AGTGCCACTGGACCTCTGTGGGGCCAGCATATAACATaGGAGACGGAAAGATGGCAACAATGGTTGACTTGG +
Preference number: 6 (lower is better)
Translates to: SATGPLWGQHIT*ETERWQQWLTW
Trigger: CCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTGGCCCCACAGAGGTCCAGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 72 bp TCTGCAGAGACGGGCAGTACAATGGGGATGCTCATGTaGATCACGCCATCATCTAGCAGGGTGTCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: SAETGSTMGMLM*ITPSSSRVSKC
Trigger: GCACTTTGACACCCTGCTAGATGATGGCGTGATCAACATGAGCATCCCCATTGTACTGCCCGTCTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS CCA 72 bp CAGCATATAACATGGGAGACGGAAAGATGGCAACAATaGTTGACTTGGGATCCAGGACCCCTTCCTCGAGCA +
Preference number: 6 (lower is better)
Translates to: QHITWETERWQQ*LTWDPGPLPRA
Trigger: TGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp TATTCCTGCTCACATGGTGGGCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCTCCTGGCAGAACGGGA +
Preference number: 6 (lower is better)
Translates to: YSCSHGGPDRLH*WISAGSPGRTG
Trigger: TCCCGTTCTGCCAGGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465996.5
CDS CAA 72 bp CATATAACATGGGAGACGGAAAGATGGCAACAATGGTaGACTTGGGATCCAGGACCCCTTCCTCGAGCACAG +
Preference number: 6 (lower is better)
Translates to: HITWETERWQQW*TWDPGPLPRAQ
Trigger: CTGTGCTCGAGGAAGGGGTCCTGGATCCCAAGTCAACCATTGTTGCCATCTTTCCGTCTCCCATGTTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 72 bp CTTCCCGGGCGAGCTTCCTCATTCGAGTTCCTGAGATaGAGTCAAACTCATTGTGCCTTGCTGGATCATAGA +
Preference number: 6 (lower is better)
Translates to: LPGRASSFEFLR*SQTHCALLDHR
Trigger: TCTATGATCCAGCAAGGCACAATGAGTTTGACTTCATCTCAGGAACTCGAATGAGGAAGCTCGCCCGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 72 bp TCAGGAAGGGCCATGCCATCTAGCAGGGTGTCAAAGTaGATAACCTGTAAGTACTCCTTCTCCCGCATGAAA +
Preference number: 6 (lower is better)
Translates to: SGRAMPSSRVSK*ITCKYSFSRMK
Trigger: TTTCATGCGGGAGAAGGAGTACTTACAGGTTATGCACTTTGACACCCTGCTAGATGGCATGGCCCTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456849.2
CDS CCA 72 bp GATAATGAAGGGAGAGTTTCAGCCTCAGCTCGGACGTaGTCAAGTTTGTTTTCCGGCACAAAGAGTTCGTGG +
Preference number: 6 (lower is better)
Translates to: DNEGRVSASART*SSLFSGTKSSW
Trigger: CCACGAACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGCTGAAACTCTCCCTTCATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 72 bp GGGAGAGTTTCAGCCTCAGCTCGGACGTGGTCAAGTTaGTTTTCCGGCACAAAGAGTTCGTGGATATCTTTG +
Preference number: 6 (lower is better)
Translates to: GRVSASARTWSS*FSGTKSSWISL
Trigger: CAAAGATATCCACGAACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGCTGAAACTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp TATTCCTGCTCACATGGTGGGCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCTCCGTCTTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: YSCSHGGPDRLH*WISAGSPSFAS
Trigger: AGAAGCAAAAGACGGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CCA 72 bp TATTCCTGCTCACATGGTGGGCCTGATAGACTACATTaGTGGATTTCTGCTGGTTCTCTATGTGTCCATTGC +
Preference number: 6 (lower is better)
Translates to: YSCSHGGPDRLH*WISAGSLCVHC
Trigger: GCAATGGACACATAGAGAACCAGCAGAAATCCACCAATGTAGTCTATCAGGCCCACCATGTGAGCAGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482258.1
CDS CAA 72 bp ACTACCTGGTGGACACAGTCACTCACTGTGGACAAATaGGTTTTAAGCACACGCTCAGGAGTTTCAGGTTTC +
Preference number: 6 (lower is better)
Translates to: TTWWTQSLTVDK*VLSTRSGVSGF
Trigger: GAAACCTGAAACTCCTGAGCGTGTGCTTAAAACCAATTTGTCCACAGTGAGTGACTGTGTCCACCAGGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS GCA 72 bp ATGTTGATCACGCCATCATCTAGCAGGGTGTCAAAGTaGATAACCTGTAAGTACTCCTTCTCCCGCATGAAA +
Preference number: 6 (lower is better)
Translates to: MLITPSSSRVSK*ITCKYSFSRMK
Trigger: TTTCATGCGGGAGAAGGAGTACTTACAGGTTATGCACTTTGACACCCTGCTAGATGATGGCGTGATCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361175.8
CDS GCA 72 bp GGCATGGCCATTGTGGACAGGATTGCGCAACTGGAATaGAAACACCGCATCAGCATTCATTTCTTTACATTT +
Preference number: 6 (lower is better)
Translates to: GMAIVDRIAQLE*KHRISIHFFTF
Trigger: AAATGTAAAGAAATGAATGCTGATGCGGTGTTTGCATTCCAGTTGCGCAATCCTGTCCACAATGGCCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS CAA 90 bp GATAATGAAGGGAGAGTTTCAGCCTCAGCTCGGACGTGGTCAAGTTaGTTTTCCGGCACAAAGAGTTCGTGGATATCTTTGATTATAGTA +
Preference number: 6 (lower is better)
Translates to: DNEGRVSASARTWSS*FSGTKSSWISLIIV
Trigger: TACTATAATCAAAGATATCCACGAACTCTTTGTGCCGGAAAACAAACTTGACCACGTCCGAGCTGAGGCTGAAACTCTCCCTTCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2
CDS TCA 72 bp TGCATCTACAAATATTTCAAAGAATGGCAGCCCTGCTaGTTCATGTATTTTGCGGGCATTCTCACGATCCTT +
Preference number: 6 (lower is better)
Translates to: CIYKYFKEWQPC*FMYFAGILTIL
Trigger: AAGGATCGTGAGAATGCCCGCAAAATACATGAATCAGCAGGGCTGCCATTCTTTGAAATATTTGTAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361175.8
ENST00000456849.2